View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0063-1-Insertion-1 (Length: 1049)

Name: NF0063-1-Insertion-1
Description: NF0063-1
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0063-1-Insertion-1
NF0063-1-Insertion-1
[»] chr3 (35 HSPs)
chr3 (7-339)||(51587939-51588264)
chr3 (702-981)||(51587554-51587842)
chr3 (773-962)||(35300788-35300976)
chr3 (619-697)||(7231899-7231976)
chr3 (488-535)||(51587890-51587938)
chr3 (619-692)||(37215129-37215201)
chr3 (654-703)||(51410939-51410988)
chr3 (619-703)||(37302961-37303044)
chr3 (620-697)||(37303485-37303561)
chr3 (619-704)||(42475863-42475947)
chr3 (620-703)||(28300533-28300615)
chr3 (619-697)||(20380782-20380859)
chr3 (619-697)||(44695112-44695190)
chr3 (923-964)||(46690120-46690161)
chr3 (921-953)||(4199891-4199923)
chr3 (921-953)||(36899690-36899722)
chr3 (923-954)||(20826780-20826811)
chr3 (923-954)||(20831108-20831139)
chr3 (923-954)||(22406894-22406925)
chr3 (923-954)||(25770546-25770577)
chr3 (923-954)||(34950194-34950225)
chr3 (923-953)||(2388684-2388714)
chr3 (923-1005)||(4199458-4199535)
chr3 (657-695)||(5244235-5244273)
chr3 (663-697)||(7293992-7294026)
chr3 (923-973)||(26741138-26741188)
chr3 (314-398)||(35301210-35301292)
chr3 (923-953)||(36899306-36899336)
chr3 (923-953)||(42606332-42606362)
chr3 (923-953)||(45539261-45539291)
chr3 (923-953)||(45539647-45539677)
chr3 (923-953)||(46689734-46689764)
chr3 (923-953)||(48868594-48868624)
chr3 (663-697)||(51673007-51673041)
chr3 (923-972)||(54588491-54588540)
[»] chr1 (31 HSPs)
chr1 (7-201)||(40224938-40225133)
chr1 (205-266)||(40225173-40225234)
chr1 (619-697)||(39010915-39010992)
chr1 (619-697)||(50141828-50141905)
chr1 (619-697)||(31436921-31436996)
chr1 (619-702)||(36690460-36690542)
chr1 (619-702)||(36706561-36706643)
chr1 (923-973)||(3591171-3591221)
chr1 (619-702)||(40610330-40610412)
chr1 (923-964)||(9122726-9122767)
chr1 (925-970)||(12869663-12869708)
chr1 (654-695)||(15083074-15083115)
chr1 (923-1005)||(19895578-19895656)
chr1 (923-964)||(32266921-32266962)
chr1 (923-964)||(40124514-40124555)
chr1 (923-954)||(17968475-17968506)
chr1 (923-954)||(30427725-30427756)
chr1 (259-310)||(40225299-40225350)
chr1 (923-954)||(45230181-45230212)
chr1 (654-697)||(51703005-51703048)
chr1 (923-953)||(8997393-8997423)
chr1 (923-953)||(9123123-9123153)
chr1 (663-697)||(30631738-30631772)
chr1 (923-953)||(32266535-32266565)
chr1 (923-973)||(36793581-36793631)
chr1 (923-953)||(40124128-40124158)
chr1 (777-847)||(45664838-45664907)
chr1 (923-953)||(47410475-47410505)
chr1 (923-953)||(47410861-47410891)
chr1 (654-702)||(7503600-7503649)
chr1 (660-697)||(28716284-28716321)
[»] scaffold0501 (1 HSPs)
scaffold0501 (619-704)||(10402-10486)
[»] chr2 (34 HSPs)
chr2 (259-399)||(18106927-18107065)
chr2 (923-1005)||(18107432-18107510)
chr2 (619-697)||(34249681-34249759)
chr2 (923-1005)||(39096964-39097041)
chr2 (923-1005)||(32861047-32861125)
chr2 (619-707)||(14140222-14140309)
chr2 (923-969)||(2035645-2035691)
chr2 (923-965)||(10709516-10709558)
chr2 (926-1005)||(39947096-39947171)
chr2 (921-969)||(2036608-2036656)
chr2 (663-703)||(11229208-11229248)
chr2 (921-973)||(39945875-39945927)
chr2 (930-973)||(2191423-2191466)
chr2 (923-954)||(3854118-3854149)
chr2 (923-954)||(12089746-12089777)
chr2 (923-954)||(22701564-22701595)
chr2 (653-692)||(23880229-23880268)
chr2 (923-954)||(44934690-44934721)
chr2 (923-953)||(1804284-1804314)
chr2 (923-953)||(1804670-1804700)
chr2 (923-953)||(6476139-6476169)
chr2 (923-953)||(6476525-6476555)
chr2 (657-695)||(8848722-8848760)
chr2 (923-953)||(11451194-11451224)
chr2 (923-973)||(24093362-24093412)
chr2 (923-953)||(27377701-27377731)
chr2 (657-695)||(27490757-27490795)
chr2 (654-695)||(38821372-38821414)
chr2 (926-964)||(39096565-39096603)
chr2 (663-701)||(43725349-43725387)
chr2 (928-977)||(3624925-3624974)
chr2 (923-964)||(11450797-11450838)
chr2 (926-971)||(23222873-23222918)
chr2 (923-964)||(27378087-27378128)
[»] chr5 (35 HSPs)
chr5 (923-973)||(119217-119267)
chr5 (619-697)||(27392595-27392672)
chr5 (923-964)||(31162859-31162900)
chr5 (619-709)||(33567120-33567209)
chr5 (284-387)||(14625533-14625633)
chr5 (923-973)||(119791-119841)
chr5 (923-973)||(3406692-3406742)
chr5 (923-973)||(19352504-19352554)
chr5 (923-973)||(19353076-19353126)
chr5 (619-695)||(33243636-33243711)
chr5 (923-964)||(3191839-3191880)
chr5 (923-964)||(3192238-3192279)
chr5 (921-954)||(3878824-3878857)
chr5 (923-964)||(6543853-6543894)
chr5 (923-972)||(14626096-14626145)
chr5 (654-695)||(18660765-18660806)
chr5 (923-964)||(28641202-28641243)
chr5 (619-704)||(31284280-31284364)
chr5 (923-954)||(119062-119093)
chr5 (921-964)||(3879209-3879252)
chr5 (657-704)||(9714021-9714068)
chr5 (924-954)||(718232-718262)
chr5 (657-695)||(1274364-1274402)
chr5 (923-953)||(5747199-5747229)
chr5 (923-953)||(6543467-6543497)
chr5 (663-697)||(11767883-11767917)
chr5 (923-953)||(21949452-21949482)
chr5 (923-953)||(21949838-21949868)
chr5 (657-703)||(24431505-24431551)
chr5 (923-953)||(28641599-28641629)
chr5 (923-953)||(31162473-31162503)
chr5 (923-953)||(39402264-39402294)
chr5 (926-971)||(4187846-4187891)
chr5 (923-964)||(5746802-5746843)
chr5 (923-964)||(39402652-39402693)
[»] chr8 (20 HSPs)
chr8 (923-973)||(4624566-4624616)
chr8 (928-972)||(16682565-16682609)
chr8 (663-701)||(24946143-24946181)
chr8 (923-1005)||(29917545-29917622)
chr8 (657-703)||(40102161-40102207)
chr8 (928-970)||(45369134-45369176)
chr8 (923-1005)||(21005956-21006034)
chr8 (926-970)||(11089304-11089348)
chr8 (923-954)||(4624412-4624443)
chr8 (923-954)||(6297687-6297718)
chr8 (926-973)||(6297872-6297919)
chr8 (923-954)||(12734611-12734642)
chr8 (921-964)||(24846004-24846047)
chr8 (923-953)||(29917157-29917187)
chr8 (923-973)||(44024431-44024481)
chr8 (927-972)||(20682742-20682787)
chr8 (654-695)||(22719446-22719487)
chr8 (654-695)||(24479242-24479283)
chr8 (654-695)||(31249548-31249589)
chr8 (927-972)||(34614052-34614096)
[»] chr7 (20 HSPs)
chr7 (619-703)||(21752759-21752842)
chr7 (923-1005)||(18443181-18443258)
chr7 (923-973)||(20544145-20544195)
chr7 (660-706)||(21858888-21858934)
chr7 (657-702)||(10591290-10591335)
chr7 (921-953)||(18443614-18443646)
chr7 (663-703)||(25887727-25887767)
chr7 (657-705)||(26153798-26153846)
chr7 (923-954)||(884734-884765)
chr7 (923-954)||(1244063-1244094)
chr7 (619-702)||(5198647-5198730)
chr7 (657-704)||(12142022-12142069)
chr7 (923-954)||(28898467-28898498)
chr7 (154-197)||(37511752-37511795)
chr7 (923-954)||(41298296-41298327)
chr7 (663-697)||(155874-155908)
chr7 (657-695)||(13152599-13152637)
chr7 (923-953)||(33847918-33847948)
chr7 (923-964)||(29784386-29784427)
chr7 (928-973)||(49053719-49053764)
[»] chr4 (41 HSPs)
chr4 (923-973)||(29691746-29691796)
chr4 (620-692)||(38844388-38844459)
chr4 (619-697)||(31275247-31275324)
chr4 (619-703)||(5234358-5234441)
chr4 (620-697)||(25523089-25523165)
chr4 (923-1005)||(28505214-28505291)
chr4 (924-973)||(10580073-10580122)
chr4 (657-702)||(15596534-15596579)
chr4 (923-964)||(28957352-28957393)
chr4 (923-964)||(31227920-31227961)
chr4 (923-1005)||(47058514-47058592)
chr4 (619-697)||(51717177-51717254)
chr4 (657-697)||(1033286-1033326)
chr4 (657-697)||(5123483-5123523)
chr4 (657-701)||(51389454-51389498)
chr4 (923-954)||(1317112-1317143)
chr4 (653-696)||(3286952-3286995)
chr4 (923-954)||(12923080-12923111)
chr4 (923-954)||(21235079-21235110)
chr4 (923-954)||(30545765-30545796)
chr4 (923-954)||(43979609-43979640)
chr4 (923-954)||(46263073-46263104)
chr4 (923-954)||(47053813-47053844)
chr4 (657-692)||(53583026-53583061)
chr4 (923-953)||(2669059-2669089)
chr4 (923-953)||(2669445-2669475)
chr4 (923-953)||(12108296-12108326)
chr4 (923-953)||(12922694-12922724)
chr4 (923-953)||(17288380-17288410)
chr4 (923-953)||(28957749-28957779)
chr4 (923-953)||(31228317-31228347)
chr4 (923-953)||(38026114-38026144)
chr4 (923-953)||(40841514-40841544)
chr4 (923-953)||(40841900-40841930)
chr4 (926-972)||(54142359-54142405)
chr4 (923-965)||(54167535-54167577)
chr4 (923-973)||(54168830-54168880)
chr4 (923-953)||(55347976-55348006)
chr4 (654-695)||(37297055-37297096)
chr4 (654-695)||(45082987-45083028)
chr4 (926-971)||(49426362-49426407)
[»] chr6 (15 HSPs)
chr6 (923-964)||(6162286-6162327)
chr6 (923-969)||(15147754-15147800)
chr6 (923-1005)||(14712835-14712913)
chr6 (923-964)||(20824602-20824643)
chr6 (921-969)||(19579207-19579255)
chr6 (921-969)||(19595654-19595702)
chr6 (654-697)||(30733144-30733187)
chr6 (923-954)||(33106981-33107012)
chr6 (923-953)||(6162695-6162725)
chr6 (923-953)||(14257199-14257229)
chr6 (923-953)||(14257585-14257615)
chr6 (923-953)||(20824216-20824246)
chr6 (663-697)||(24752375-24752409)
chr6 (663-697)||(26378278-26378312)
chr6 (925-970)||(8710349-8710394)
[»] scaffold0148 (2 HSPs)
scaffold0148 (923-1005)||(33001-33079)
scaffold0148 (923-954)||(29326-29357)
[»] scaffold0085 (1 HSPs)
scaffold0085 (923-964)||(39462-39503)
[»] scaffold0014 (1 HSPs)
scaffold0014 (654-701)||(124288-124336)


Alignment Details
Target: chr3 (Bit Score: 289; Significance: 1e-161; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 289; E-Value: 1e-161
Query Start/End: Original strand, 7 - 339
Target Start/End: Complemental strand, 51588264 - 51587939
Alignment:
Q  7 aagagcgacatcagctatggaatgatacttctgcatctgaaagatttggatccaatgg-gtctacgacgatggatatgggcgaaaacattgatgtaatca 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  51588264 aagagcgacatcagctatggaatgatacttctgcatctgaaagatttggatccaatggagtctacgacgatggataggggcgaaaacattgatgtaatca 51588165  T
Q  106 acggcggaggataggtgagagagatgagaacatagagcgtcgacgattgcgttggcagcggcgaactcgccgtgaaaccaagcgaggattgcgtctggct 205  Q
    |||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51588164 acggcggaggataggtgagagagat--------agagcgtcgacgattgcgttggcagcggcgaactcgccgtgaaaccaagcgaggattgcgtctggct 51588073  T
Q  206 gaagaggtgaggttgtgggacctacaacggtaggtcgatcggtgttggtgtttgatgttgggaagaacaaagatcttaggtcgaaatctggctttagaat 305  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51588072 gaagaggtgaggttgtgggacctacaacggtaggtcgatcggtggtggtgtttgatgttgggaagaacaaagatcttaggtcgaaatctggctttagaat 51587973  T
Q  306 tgtcgtttgtgaagtagtagaaacaaagatttgt 339  Q
    ||||||||||||||||||||||||||||||||||    
T  51587972 tgtcgtttgtgaagtagtagaaacaaagatttgt 51587939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 702 - 981
Target Start/End: Complemental strand, 51587842 - 51587554
Alignment:
Q  702 attaaattagctacactaccnnnnnnntttaattaaattaactacaaatcaacactaataatattataa--------tgaatg--tgtgggacccattac 791  Q
    ||||||||| ||||||||||       |||||||||||||||||||||||||||||||||||||||| |        | | |   |||||||||||||||    
T  51587842 attaaattaactacactaccaaaaaaatttaattaaattaactacaaatcaacactaataatattattaatttacattcatttaatgtgggacccattac 51587743  T
Q  792 tgccacatatacatctatgtgtatttgattatttgcgatatcataaaataattggggccaccatctgccacttcaacgtcctgttagaaaattaacgaca 891  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||| |  |    
T  51587742 tgccacatatacatttatgtgtatttgattatttgcgatatcataaaataattgggaccaccatctgccacttcagcgt-ctgttagaaaattaatggta 51587644  T
Q  892 aggactattttatgataacgg-nnnnnnnntatagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgca 981  Q
    | ||||| |||||||||| ||         ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||    
T  51587643 acgacta-tttatgataatggaaaaaaaaatatagggattttaaaaatatttattgaaatgtaatgactattctttaaaatcagtcatgca 51587554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 773 - 962
Target Start/End: Complemental strand, 35300976 - 35300788
Alignment:
Q  773 aatgtgtgggacccattactgccacatatacatctatgtgtatttgattatttgcgatatcataaaataattgggg-ccaccatctgccacttcaacgtc 871  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| | ||||||||| || ||||| ||| |||||||||| ||| | |     
T  35300976 aatgtgtgggacccattactgccacatatacatccatgtgtatctgatt-tttgccacatcataaaaaaactggggtccagcatctgccacgtcagcctt 35300878  T
Q  872 ctgttagaaaattaacgacaaggactattttatgataacggnnnnnnnntatagggattttaaaaacatttattgaaatgtaatgattatt 962  Q
    | ||||||||||| ||  || |||| | ||| || ||||||        | |||||||||||||||||||||||||||||||| |||||||    
T  35300877 ccgttagaaaattgacaccagggacca-tttgtgctaacggatgaaaaatgtagggattttaaaaacatttattgaaatgtaaggattatt 35300788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 619 - 697
Target Start/End: Complemental strand, 7231976 - 7231899
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||| | | ||||||||||||||||||||    
T  7231976 cattgtttttgaccaatgaaaagagagaaaaaa-taaattgtcacaaaagttgtatcaaatggttgttcaaatatcact 7231899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 488 - 535
Target Start/End: Complemental strand, 51587938 - 51587890
Alignment:
Q  488 gtttgccca-aaaagctgctggtggaggtgtttgttacgatgaagggac 535  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  51587938 gtttgcccagaaaagctgctggtggaggtgtttgttacgatgaagggac 51587890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 619 - 692
Target Start/End: Complemental strand, 37215201 - 37215129
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaata 692  Q
    |||||||||||||||||||||||||||       ||| |||||||||||||||||| |||||||||||||||||    
T  37215201 cattgtttttgaccaatgaaaagagagaaaaaa-taagttgtcacaaaagttgtctcatatggttgttcaaata 37215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 654 - 703
Target Start/End: Original strand, 51410939 - 51410988
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcat 703  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  51410939 aaattgtcacaaaagttatctcatatggttgttcaaataacactgctcat 51410988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 619 - 703
Target Start/End: Complemental strand, 37303044 - 37302961
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcat 703  Q
    |||||||||| ||||||||||||||||        ||||||||||||||||||||| ||||| ||||||||||| |||| |||||    
T  37303044 cattgttttttaccaatgaaaagagagaaaaaag-aaattgtcacaaaagttgtctcatatgcttgttcaaataacactactcat 37302961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 620 - 697
Target Start/End: Original strand, 37303485 - 37303561
Alignment:
Q  620 attgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    ||||||||||| ||||||||||||||       |||||||||||||||||||||| |||| |||||||||||| ||||    
T  37303485 attgtttttgatcaatgaaaagagagaaaaaa-taaattgtcacaaaagttgtctcatatagttgttcaaataacact 37303561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 619 - 704
Target Start/End: Complemental strand, 42475947 - 42475863
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcatt 704  Q
    ||||| |||||||||||||||||||||       ||| || ||||||||||||||| ||||||||||||||||| |||| ||||||    
T  42475947 cattggttttgaccaatgaaaagagagaaaaaa-taagttttcacaaaagttgtcttatatggttgttcaaataacactactcatt 42475863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 620 - 703
Target Start/End: Complemental strand, 28300615 - 28300533
Alignment:
Q  620 attgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcat 703  Q
    ||||||||||||||||||||||||||        || ||||||||| |||||| | |||||||||||||||||||||| |||||    
T  28300615 attgtttttgaccaatgaaaagagagaaaataa-aagttgtcacaagagttgtatcatatggttgttcaaatatcactactcat 28300533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 619 - 697
Target Start/End: Complemental strand, 20380859 - 20380782
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    ||||||||||||||||||||||| |||        || |||||||||||||||| ||| ||||||||||||||||||||    
T  20380859 cattgtttttgaccaatgaaaagtgagaaaaaag-aagttgtcacaaaagttgtttaaaatggttgttcaaatatcact 20380782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 619 - 697
Target Start/End: Original strand, 44695112 - 44695190
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||| ||||||||||| ||||       |||||| ||||||||||||| | | ||||||||||||||||||||    
T  44695112 cattgtttttaaccaatgaaaaaagagaaaaaaataaattatcacaaaagttgtatgaaatggttgttcaaatatcact 44695190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 46690120 - 46690161
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  46690120 tagggattttaaaaacatttattgaaatgtagggattattct 46690161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 953
Target Start/End: Original strand, 4199891 - 4199923
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||||    
T  4199891 tatagggattttaaaaacatttattgaaatgta 4199923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 953
Target Start/End: Original strand, 36899690 - 36899722
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||||    
T  36899690 tatagggattttaaaaacatttattgaaatgta 36899722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 20826811 - 20826780
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  20826811 tagggattttaaaaacatttattgaaatgtaa 20826780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Original strand, 20831108 - 20831139
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  20831108 tagggattttaaaaacatttattgaaatgtaa 20831139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 22406925 - 22406894
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  22406925 tagggattttaaaaacatttattgaaatgtaa 22406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 25770577 - 25770546
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  25770577 tagggattttaaaaacatttattgaaatgtaa 25770546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Original strand, 34950194 - 34950225
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  34950194 tagggattttaaaaacatttattgaaatgtaa 34950225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 2388714 - 2388684
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  2388714 tagggattttaaaaacatttattgaaatgta 2388684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 1005
Target Start/End: Complemental strand, 4199535 - 4199458
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||| ||| || ||||||  |||     || ||||||||| || |||||||||||||||    
T  4199535 tagggattttaaaaacatttattgaaatataaggactattctcaaaa-----tcgtgcaaaatgtagggaccaaaaacatatt 4199458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 5244273 - 5244235
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  5244273 ttgtcacaaaagttgtaaaatatggttgttcaaatatca 5244235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 663 - 697
Target Start/End: Complemental strand, 7294026 - 7293992
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||| ||||||||||||||||||||    
T  7294026 caaaagttgtctaaaatggttgttcaaatatcact 7293992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 973
Target Start/End: Original strand, 26741138 - 26741188
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    ||||| ||||||| |||||||||||||||||| ||||||| || |||||||    
T  26741138 tagggtttttaaagacatttattgaaatgtaaggattatttttcaaagtca 26741188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 398
Target Start/End: Complemental strand, 35301292 - 35301210
Alignment:
Q  314 gtgaagtagtagaaacaaagatttgtt--tgtttgttgtttttagaagggaaagaaaggtgaagagaaaaagggttcaggcttatga 398  Q
    |||||| ||||||||||||| |||||   |||||||| ||||||||||||||||    ||||||| |||||||||| | ||||||||    
T  35301292 gtgaagcagtagaaacaaaggtttgtgagtgtttgttatttttagaagggaaag----gtgaagaaaaaaagggtttatgcttatga 35301210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 36899336 - 36899306
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  36899336 tagggattttaaaaacatttattgaaatgta 36899306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 42606362 - 42606332
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  42606362 tagggattttaaaaacatttattgaaatgta 42606332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 45539291 - 45539261
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  45539291 tagggattttaaaaacatttattgaaatgta 45539261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 45539647 - 45539677
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  45539647 tagggattttaaaaacatttattgaaatgta 45539677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 46689764 - 46689734
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  46689764 tagggattttaaaaacatttattgaaatgta 46689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 48868594 - 48868624
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  48868594 tagggattttaaaaacatttattgaaatgta 48868624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 663 - 697
Target Start/End: Original strand, 51673007 - 51673041
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||| ||||||||||||||||||||    
T  51673007 caaaagttgtctaaaatggttgttcaaatatcact 51673041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 923 - 972
Target Start/End: Complemental strand, 54588540 - 54588491
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtc 972  Q
    |||| ||||||||||||||||||||||||||  || ||||||| ||||||    
T  54588540 taggaattttaaaaacatttattgaaatgtatggactattcttcaaagtc 54588491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 9e-73; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 9e-73
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 40224938 - 40225133
Alignment:
Q  7 aagagcgacatcagctatggaatgatacttctgcatctgaaagatttggatccaatgg-gtctacgacgatggatatgggcgaaaacattgatgtaatca 105  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||  ||||||||||||| ||||||||    
T  40224938 aagagcgacatcagcaatggagtgatacttctgcatctgaaggatttggatccaatggagtctccgacgatggatagcggcgaaaacattgctgtaatca 40225037  T
Q  106 acggcggaggataggtgagagagatgagaacatagagcgtcgacgattgcgttggcagcggcgaactcgccgtgaaaccaagcgaggattgcgtct 201  Q
     |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40225038 gcggcggaggagaggtgagagagatgagaacagagagcgtcgatgattgcgttggcagcggcgaactcgccgtgaaaccaagcgaggatagcgtct 40225133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 40225173 - 40225234
Alignment:
Q  205 tgaagaggtgaggttgtgggacctacaacggtaggtcgatcggtgttggtgtttgatgttgg 266  Q
    |||||||| | |||||||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  40225173 tgaagaggagtggttgtgggacctacaacggtaggtcgatcggtggtggtggttgttgttgg 40225234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 619 - 697
Target Start/End: Original strand, 39010915 - 39010992
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||||||||||||||||       ||| |||||||||||||||||| ||||||||||||||||| ||||    
T  39010915 cattgtttttgaccaatgaaaagagagaaaaaa-taagttgtcacaaaagttgtctcatatggttgttcaaataacact 39010992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 619 - 697
Target Start/End: Complemental strand, 50141905 - 50141828
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||| |||| |||||||||||| ||||    
T  50141905 cattgtttttgaccaatgaaaagagagagaaaa-taaattgtcacaaaagttgtctcatatagttgttcaaataacact 50141828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 619 - 697
Target Start/End: Original strand, 31436921 - 31436996
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    ||||||||||||||||||||||||||        |||||||||||||||||| ||| ||||||||||||||||| ||||    
T  31436921 cattgtttttgaccaatgaaaagaga---aaaaataaattgtcacaaaagttatctcatatggttgttcaaataacact 31436996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 619 - 702
Target Start/End: Complemental strand, 36690542 - 36690460
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctca 702  Q
    |||||||||||||||||||||| ||||       ||| |||||||||||||||||| ||||||||||||||||| |||| ||||    
T  36690542 cattgtttttgaccaatgaaaatagagagaaaa-taagttgtcacaaaagttgtctcatatggttgttcaaataacactactca 36690460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 619 - 702
Target Start/End: Complemental strand, 36706643 - 36706561
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctca 702  Q
    |||||||||||||||||||||| ||||       ||| |||||||||||||||||| ||||||||||||||||| |||| ||||    
T  36706643 cattgtttttgaccaatgaaaatagagagaaaa-taagttgtcacaaaagttgtctcatatggttgttcaaataacactactca 36706561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 973
Target Start/End: Original strand, 3591171 - 3591221
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||||||||||||||||||||||||||||||| || |||| || |||||||    
T  3591171 tagggattttaaaaacatttattgaaatgtaaggactatttttcaaagtca 3591221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 619 - 702
Target Start/End: Original strand, 40610330 - 40610412
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctca 702  Q
    |||||||||||||||||||||||||||        || |||||||||||||||||| | |||| ||||||||||||||| ||||    
T  40610330 cattgtttttgaccaatgaaaagagagagaaaag-aagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactca 40610412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Complemental strand, 9122767 - 9122726
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  9122767 tagggattttaaaaacatttattgaaatgtaaggactattct 9122726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 925 - 970
Target Start/End: Original strand, 12869663 - 12869708
Alignment:
Q  925 gggattttaaaaacatttattgaaatgtaatgattattctttaaag 970  Q
    |||||||||||||||||||||||||||||  || ||||||||||||    
T  12869663 gggattttaaaaacatttattgaaatgtagggactattctttaaag 12869708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 15083074 - 15083115
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  15083074 aaattgtcacaaaagttgtcaaaaatggttgttcaaatatca 15083115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 1005
Target Start/End: Complemental strand, 19895656 - 19895578
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    ||||||||||||||||||||||||||||| || || |||| || ||    ||||| |||||||  ||||||||||||||||||    
T  19895656 tagggattttaaaaacatttattgaaatgcaaagactatttttcaa----agtcacgcaaaatatagagaccaaaaacatatt 19895578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 32266921 - 32266962
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  32266921 tagggattttaaaaacatttattgaaatgtagggattattct 32266962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 40124514 - 40124555
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  40124514 tagggattttaaaaacatttattgaaatgtagggattattct 40124555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Original strand, 17968475 - 17968506
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  17968475 tagggattttaaaaacatttattgaaatgtaa 17968506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 30427756 - 30427725
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  30427756 tagggattttaaaaacatttattgaaatgtaa 30427725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 40225299 - 40225350
Alignment:
Q  259 gatgttgggaagaacaaagatcttaggtcgaaatctggctttagaattgtcg 310  Q
    ||||| ||||||||||| ||| || | |||||||||||||||||||||||||    
T  40225299 gatgtcgggaagaacaatgatgttggttcgaaatctggctttagaattgtcg 40225350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 45230212 - 45230181
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  45230212 tagggattttaaaaacatttattgaaatgtaa 45230181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 697
Target Start/End: Complemental strand, 51703048 - 51703005
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    ||||| ||||||||||||||| | ||||||||||||||||||||    
T  51703048 aaattatcacaaaagttgtctgaaatggttgttcaaatatcact 51703005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 8997423 - 8997393
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  8997423 tagggattttaaaaacatttattgaaatgta 8997393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 9123123 - 9123153
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  9123123 tagggattttaaaaacatttattgaaatgta 9123153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 663 - 697
Target Start/End: Complemental strand, 30631772 - 30631738
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||| ||||||||||||||||||||    
T  30631772 caaaagttgtctaaaatggttgttcaaatatcact 30631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 32266565 - 32266535
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  32266565 tagggattttaaaaacatttattgaaatgta 32266535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 973
Target Start/End: Original strand, 36793581 - 36793631
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    ||||||||||||||||||||||| |||||||  || ||||||| |||||||    
T  36793581 tagggattttaaaaacatttattaaaatgtagagactattcttcaaagtca 36793631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 40124158 - 40124128
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  40124158 tagggattttaaaaacatttattgaaatgta 40124128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 777 - 847
Target Start/End: Complemental strand, 45664907 - 45664838
Alignment:
Q  777 tgtgggacccattactgccacatatacatctatgtgtatttgattatttgcgatatcataaaataattggg 847  Q
    |||||||||| | |||||||| |||||||| || ||||||||||| ||||| | |||||||| ||||||||    
T  45664907 tgtgggacccgtcactgccacgtatacatccatatgtatttgatt-tttgccacatcataaattaattggg 45664838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 47410505 - 47410475
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  47410505 tagggattttaaaaacatttattgaaatgta 47410475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 47410861 - 47410891
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  47410861 tagggattttaaaaacatttattgaaatgta 47410891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 654 - 702
Target Start/End: Original strand, 7503600 - 7503649
Alignment:
Q  654 aaattgtcac-aaaagttgtctaatatggttgttcaaatatcactgctca 702  Q
    |||||||||| ||||||||| | | |||||||||||||||||||||||||    
T  7503600 aaattgtcaccaaaagttgtatgaaatggttgttcaaatatcactgctca 7503649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 660 - 697
Target Start/End: Original strand, 28716284 - 28716321
Alignment:
Q  660 tcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  28716284 tcacaaaagttgtctcaaatggttgttcaaatatcact 28716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 619 - 704
Target Start/End: Complemental strand, 10486 - 10402
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcatt 704  Q
    |||||||||||||||||||||||||||       ||| |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  10486 cattgtttttgaccaatgaaaagagagagaaaa-taagttgtcacaaaagttgtctcatatggttgttcaaataacactgctcatt 10402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 3e-17; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 259 - 399
Target Start/End: Original strand, 18106927 - 18107065
Alignment:
Q  259 gatgttgggaagaacaaagatcttaggtcgaaatctggctttagaattgtcgtttgtgaagtagtagaaacaaagatttg--tttgtttgttgtttttag 356  Q
    ||||| ||||||||||| ||| || |||||||||||| ||||| ||||||||   |||||  | |||||  |||| ||||  | ||||||||||||||||    
T  18106927 gatgtcgggaagaacaatgatgttgggtcgaaatctgtctttaaaattgtcgcaggtgaaacaatagaatgaaaggtttgggtgtgtttgttgtttttag 18107026  T
Q  357 aagggaaagaaaggtgaagagaaaaagggttcaggcttatgag 399  Q
    ||||||||    ||||||||||||||||||| |||||||||||    
T  18107027 aagggaaa----ggtgaagagaaaaagggtttaggcttatgag 18107065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 923 - 1005
Target Start/End: Original strand, 18107432 - 18107510
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||     ||||||||||| ||| |||||||||||    
T  18107432 tagggattttaaaaacatttattaaaatgtaaggattattctttaaagtcac----gcaaaatgcagggactaaaaacatatt 18107510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 619 - 697
Target Start/End: Original strand, 34249681 - 34249759
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||||||||||||||||       ||| ||||||||||| |||||| ||||||||||||||||| ||||    
T  34249681 cattgtttttgaccaatgaaaagagagaaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacact 34249759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 923 - 1005
Target Start/End: Original strand, 39096964 - 39097041
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||     || ||||||||| || |||||||||||||||    
T  39096964 tagggattttaaaaacatttattgaaatgtaaggattattctcaaaa-----tcgtgcaaaatgtagggaccaaaaacatatt 39097041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 923 - 1005
Target Start/End: Original strand, 32861047 - 32861125
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||| ||| || |||| || |||||||  ||  |||||||||| |||||||||||||||    
T  32861047 tagggattttaaaaacatttattgaaatataaggactatttttcaaagtca--ca--caaaatgcagggaccaaaaacatatt 32861125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 619 - 707
Target Start/End: Complemental strand, 14140309 - 14140222
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcattaaa 707  Q
    |||||||||||||||||||||||||||        ||||||||||||||||| | | | ||| |||||||||||||||| |||||||||    
T  14140309 cattgtttttgaccaatgaaaagagagaaaaaag-aaattgtcacaaaagttattttaaatgattgttcaaatatcactactcattaaa 14140222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 969
Target Start/End: Complemental strand, 2035691 - 2035645
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaa 969  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||    
T  2035691 tagggattttaaaaacatttattaaaatgtagggattattctttaaa 2035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 965
Target Start/End: Complemental strand, 10709558 - 10709516
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctt 965  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  10709558 tagggattttaaaaacatttattgaaatgtaaggactattctt 10709516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 926 - 1005
Target Start/End: Original strand, 39947096 - 39947171
Alignment:
Q  926 ggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    ||||||||||||||||||||||||||||| || |||| || ||||||| |    ||||||| || |||||||||||||||    
T  39947096 ggattttaaaaacatttattgaaatgtaaggactattgttcaaagtcact----caaaatgtagggaccaaaaacatatt 39947171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 969
Target Start/End: Original strand, 2036608 - 2036656
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgtaatgattattctttaaa 969  Q
    ||||||||||||||||||||| |||||||||||  || |||||||||||    
T  2036608 tatagggattttaaaaacattaattgaaatgtagggactattctttaaa 2036656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 703
Target Start/End: Complemental strand, 11229248 - 11229208
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcactgctcat 703  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  11229248 caaaagttgtctaaaatggttgttcaaatatcactactcat 11229208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 973
Target Start/End: Complemental strand, 39945927 - 39945875
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||| ||||||||||||||||||||||||||||| || |||| || |||||||    
T  39945927 tataaggattttaaaaacatttattgaaatgtaaggactattgttcaaagtca 39945875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 930 - 973
Target Start/End: Complemental strand, 2191466 - 2191423
Alignment:
Q  930 tttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||||||||||||||| |||||||| |||||||||| |||||||    
T  2191466 tttaaaaacatttattaaaatgtaaggattattcttcaaagtca 2191423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 3854149 - 3854118
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  3854149 tagggattttaaaaacatttattgaaatgtaa 3854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 12089777 - 12089746
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  12089777 tagggattttaaaaacatttattgaaatgtaa 12089746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 22701595 - 22701564
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  22701595 tagggattttaaaaacatttattgaaatgtaa 22701564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 692
Target Start/End: Original strand, 23880229 - 23880268
Alignment:
Q  653 taaattgtcacaaaagttgtctaatatggttgttcaaata 692  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  23880229 taaattgtcataaaagttgtctcatatggttgttcaaata 23880268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Original strand, 44934690 - 44934721
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  44934690 tagggattttaaaaacatttattgaaatgtaa 44934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 1804314 - 1804284
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  1804314 tagggattttaaaaacatttattgaaatgta 1804284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 1804670 - 1804700
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  1804670 tagggattttaaaaacatttattgaaatgta 1804700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 6476169 - 6476139
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  6476169 tagggattttaaaaacatttattgaaatgta 6476139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 6476525 - 6476555
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  6476525 tagggattttaaaaacatttattgaaatgta 6476555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 8848722 - 8848760
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  8848722 ttgtcacaaaagttgtcaaaaatggttgttcaaatatca 8848760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 11451194 - 11451224
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  11451194 tagggattttaaaaacatttattgaaatgta 11451224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 973
Target Start/End: Complemental strand, 24093412 - 24093362
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    ||||||||||||||||||||||||||||| || || |||| || |||||||    
T  24093412 tagggattttaaaaacatttattgaaatgcaaggactatttttcaaagtca 24093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 27377731 - 27377701
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  27377731 tagggattttaaaaacatttattgaaatgta 27377701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Original strand, 27490757 - 27490795
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  27490757 ttgtcacaaaagttgtcaaaaatggttgttcaaatatca 27490795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 38821414 - 38821372
Alignment:
Q  654 aaattgtcacaaaagttgtc-taatatggttgttcaaatatca 695  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  38821414 aaattgtcacaaaagttgtcataaaatggttgttcaaatatca 38821372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 926 - 964
Target Start/End: Complemental strand, 39096603 - 39096565
Alignment:
Q  926 ggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    ||||||||||||||||||||||||||||| || ||||||    
T  39096603 ggattttaaaaacatttattgaaatgtaaggactattct 39096565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 663 - 701
Target Start/End: Original strand, 43725349 - 43725387
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcactgctc 701  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  43725349 caaaagttgtctaaaatggttgttcaaatatcaccgctc 43725387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 928 - 977
Target Start/End: Original strand, 3624925 - 3624974
Alignment:
Q  928 attttaaaaacatttattgaaatgtaatgattattctttaaagtcagtca 977  Q
    ||||||||||||||||||||||||||  || ||||||| |||||| ||||    
T  3624925 attttaaaaacatttattgaaatgtagggactattcttcaaagtccgtca 3624974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 923 - 964
Target Start/End: Complemental strand, 11450838 - 11450797
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||| ||||||||||||||||||||  |||||||||    
T  11450838 tagggatttttaaaacatttattgaaatgtagggattattct 11450797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 926 - 971
Target Start/End: Original strand, 23222873 - 23222918
Alignment:
Q  926 ggattttaaaaacatttattgaaatgtaatgattattctttaaagt 971  Q
    ||||||||||||||| ||||||||||||| || |||| ||||||||    
T  23222873 ggattttaaaaacatatattgaaatgtaaggactattatttaaagt 23222918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 27378087 - 27378128
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||| ||||||||||||||||||||  |||||||||    
T  27378087 tagggatttttaaaacatttattgaaatgtagggattattct 27378128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 923 - 973
Target Start/End: Complemental strand, 119267 - 119217
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||    
T  119267 tagggattttaaaaacatttattgaaatgtaaggactattctttaaagtca 119217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 619 - 697
Target Start/End: Complemental strand, 27392672 - 27392595
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    ||||||||||||||||||||||||||        ||| |||||||||||||||||| ||||||||||||||||| ||||    
T  27392672 cattgtttttgaccaatgaaaagaga-aaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacact 27392595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 31162859 - 31162900
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  31162859 tagggattttaaaaacatttattgaaatgtaaggattattct 31162900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 619 - 709
Target Start/End: Complemental strand, 33567209 - 33567120
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcattaaatt 709  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||| | | ||||||||||| |||||||| ||| |||||||    
T  33567209 cattgtttttgaccaatgaaaagagagaaaaaag-aaattgtcacaaaagttgtatcaaatggttgttcatatatcactactctttaaatt 33567120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 14625633 - 14625533
Alignment:
Q  284 ggtcgaaatctggctttagaattgtcgtttgtgaagtagtagaaacaaagatt-tgtttgtttgttgtttttagaagggaaagaaaggtgaagagaaaaa 382  Q
    ||||| ||||||| ||||||||||||    |||||  | ||||||||||| || ||| |||||||||||||||||||||    |||||||||||||||||    
T  14625633 ggtcggaatctggatttagaattgtcagaggtgaaacaatagaaacaaaggttgtgtgtgtttgttgtttttagaaggg----aaaggtgaagagaaaaa 14625538  T
Q  383 gggtt 387  Q
    |||||    
T  14625537 gggtt 14625533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 973
Target Start/End: Original strand, 119791 - 119841
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    ||||||||||||||||||||||||||||| || || ||||||| |||||||    
T  119791 tagggattttaaaaacatttattgaaatgcaaggactattcttcaaagtca 119841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 973
Target Start/End: Original strand, 3406692 - 3406742
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||||||||||||||||||||||||||||||| || |||| || |||||||    
T  3406692 tagggattttaaaaacatttattgaaatgtaaggactatttttaaaagtca 3406742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 973
Target Start/End: Complemental strand, 19352554 - 19352504
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    ||||||||||||||||||||||||||||| || || ||||||| |||||||    
T  19352554 tagggattttaaaaacatttattgaaatgcaaggactattcttcaaagtca 19352504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 973
Target Start/End: Original strand, 19353076 - 19353126
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||||||||||||||||||||||||||||| | || ||||||| |||||||    
T  19353076 tagggattttaaaaacatttattgaaatgtgaggactattcttcaaagtca 19353126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 619 - 695
Target Start/End: Complemental strand, 33243711 - 33243636
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    |||||||||| ||||||||||||||||       |||||||||||||||||| ||| | ||||||||||||||||||    
T  33243711 cattgtttttaaccaatgaaaagagagaaaaaa-taaattgtcacaaaagttatctgaaatggttgttcaaatatca 33243636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Complemental strand, 3191880 - 3191839
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  3191880 tagggattttaaaaacatttattgaaatgtaaggactattct 3191839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 3192238 - 3192279
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  3192238 tagggattttaaaaacatttattgaaatgtaaggactattct 3192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 921 - 954
Target Start/End: Complemental strand, 3878857 - 3878824
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||||    
T  3878857 tatagggattttaaaaacatttattgaaatgtaa 3878824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 6543853 - 6543894
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  6543853 tagggattttaaaaacatttattgaaatgtagggattattct 6543894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 972
Target Start/End: Original strand, 14626096 - 14626145
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtc 972  Q
    |||||||||||||||||||||||||||||||  || |||| |||||||||    
T  14626096 tagggattttaaaaacatttattgaaatgtagggactattttttaaagtc 14626145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 18660806 - 18660765
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  18660806 aaattgtcacaaaagttgtcaaaaatggttgttcaaatatca 18660765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Complemental strand, 28641243 - 28641202
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  28641243 tagggattttaaaaacatttattgaaatgtagggattattct 28641202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 619 - 704
Target Start/End: Complemental strand, 31284364 - 31284280
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcatt 704  Q
    |||||||||| ||||||||||||||||        || ||||| |||||||||| | | |||||||||||||||||||||||||||    
T  31284364 cattgtttttaaccaatgaaaagagagagaaaag-aagttgtcgcaaaagttgtatgaaatggttgttcaaatatcactgctcatt 31284280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 119093 - 119062
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  119093 tagggattttaaaaacatttattgaaatgtaa 119062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 964
Target Start/End: Original strand, 3879209 - 3879252
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    ||||||||||||||||||||| |||||||||||  |||||||||    
T  3879209 tatagggattttaaaaacattcattgaaatgtagggattattct 3879252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 704
Target Start/End: Complemental strand, 9714068 - 9714021
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcactgctcatt 704  Q
    ||||||||| |||||| | |||||||||||||||||||||| ||||||    
T  9714068 ttgtcacaagagttgtatcatatggttgttcaaatatcactactcatt 9714021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 924 - 954
Target Start/End: Original strand, 718232 - 718262
Alignment:
Q  924 agggattttaaaaacatttattgaaatgtaa 954  Q
    |||||||||||||||||||||||||||||||    
T  718232 agggattttaaaaacatttattgaaatgtaa 718262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 1274402 - 1274364
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  1274402 ttgtcacaaaagttgtcaaaaatggttgttcaaatatca 1274364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 5747199 - 5747229
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  5747199 tagggattttaaaaacatttattgaaatgta 5747229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 6543497 - 6543467
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  6543497 tagggattttaaaaacatttattgaaatgta 6543467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 663 - 697
Target Start/End: Complemental strand, 11767917 - 11767883
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||| ||||||||||||||||||||    
T  11767917 caaaagttgtctaaaatggttgttcaaatatcact 11767883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 21949482 - 21949452
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  21949482 tagggattttaaaaacatttattgaaatgta 21949452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 21949838 - 21949868
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  21949838 tagggattttaaaaacatttattgaaatgta 21949868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 657 - 703
Target Start/End: Complemental strand, 24431551 - 24431505
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcactgctcat 703  Q
    ||||||||| |||||||| | |||||||||||||||||||| |||||    
T  24431551 ttgtcacaatagttgtctcaaatggttgttcaaatatcactactcat 24431505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 28641599 - 28641629
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  28641599 tagggattttaaaaacatttattgaaatgta 28641629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 31162503 - 31162473
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  31162503 tagggattttaaaaacatttattgaaatgta 31162473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 39402294 - 39402264
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  39402294 tagggattttaaaaacatttattgaaatgta 39402264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 926 - 971
Target Start/End: Original strand, 4187846 - 4187891
Alignment:
Q  926 ggattttaaaaacatttattgaaatgtaatgattattctttaaagt 971  Q
    |||||||||||| |||||||||||||||| || |||| ||||||||    
T  4187846 ggattttaaaaatatttattgaaatgtaaggactattatttaaagt 4187891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 923 - 964
Target Start/End: Complemental strand, 5746843 - 5746802
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||| ||||||||||||||||||||  |||||||||    
T  5746843 tagggatttttaaaacatttattgaaatgtagggattattct 5746802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 39402652 - 39402693
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    ||||||||||||||| |||||||||||||||| || ||||||    
T  39402652 tagggattttaaaaatatttattgaaatgtaaggactattct 39402693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000002; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 923 - 973
Target Start/End: Complemental strand, 4624616 - 4624566
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  4624616 tagggattttaaaaacatttattgaaatgtaaagactattcttcaaagtca 4624566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 928 - 972
Target Start/End: Complemental strand, 16682609 - 16682565
Alignment:
Q  928 attttaaaaacatttattgaaatgtaatgattattctttaaagtc 972  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||    
T  16682609 attttaaaaacattttttgaaatgtaatgactattctttaaagtc 16682565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 663 - 701
Target Start/End: Original strand, 24946143 - 24946181
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcactgctc 701  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  24946143 caaaagttgtctaaaatggttgttcaaatatcactgctc 24946181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 1005
Target Start/End: Original strand, 29917545 - 29917622
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||||||| || ||||||  |||     || ||||||||| || |||||||||||||||    
T  29917545 tagggattttaaaaacatttattgaaatgtaaggactattctcaaaa-----tcgtgcaaaatgtagggaccaaaaacatatt 29917622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 657 - 703
Target Start/End: Original strand, 40102161 - 40102207
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcactgctcat 703  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||    
T  40102161 ttgtcacaaaagttgtctcatatggttgttcaaataacactactcat 40102207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 928 - 970
Target Start/End: Original strand, 45369134 - 45369176
Alignment:
Q  928 attttaaaaacatttattgaaatgtaatgattattctttaaag 970  Q
    ||||||||||||||||||||||||||| ||||||| |||||||    
T  45369134 attttaaaaacatttattgaaatgtaaggattattttttaaag 45369176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 1005
Target Start/End: Original strand, 21005956 - 21006034
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||||||| || |||| || ||    || || |||||||| || |||||||||||||||    
T  21005956 tagggattttaaaaacatttattgaaatgtaaggactatttttcaa----agccacgcaaaatgtagggaccaaaaacatatt 21006034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 926 - 970
Target Start/End: Original strand, 11089304 - 11089348
Alignment:
Q  926 ggattttaaaaacatttattgaaatgtaatgattattctttaaag 970  Q
    |||||||||||| |||||  |||||||||||||||||||||||||    
T  11089304 ggattttaaaaatatttaacgaaatgtaatgattattctttaaag 11089348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 4624443 - 4624412
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  4624443 tagggattttaaaaacatttattgaaatgtaa 4624412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 6297718 - 6297687
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  6297718 tagggattttaaaaacatttattgaaatgtaa 6297687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 926 - 973
Target Start/End: Original strand, 6297872 - 6297919
Alignment:
Q  926 ggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||||||||||||||||| |||||||||| || ||||||| |||||||    
T  6297872 ggattttaaaaacatttaatgaaatgtaaggactattcttcaaagtca 6297919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Original strand, 12734611 - 12734642
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  12734611 tagggattttaaaaacatttattgaaatgtaa 12734642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 921 - 964
Target Start/End: Complemental strand, 24846047 - 24846004
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||| ||||||||||||||||||||||||||| || ||||||    
T  24846047 tataggaattttaaaaacatttattgaaatgtaaggactattct 24846004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 29917187 - 29917157
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  29917187 tagggattttaaaaacatttattgaaatgta 29917157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 973
Target Start/End: Complemental strand, 44024481 - 44024431
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    ||||||||||||||| |||||||||||||||| || |||| || |||||||    
T  44024481 tagggattttaaaaatatttattgaaatgtaaggactatttttcaaagtca 44024431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 927 - 972
Target Start/End: Complemental strand, 20682787 - 20682742
Alignment:
Q  927 gattttaaaaacatttattgaaatgtaatgattattctttaaagtc 972  Q
    ||||||||||||||||||| |||||||| || ||||||| ||||||    
T  20682787 gattttaaaaacatttattaaaatgtaaggactattcttcaaagtc 20682742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 22719487 - 22719446
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  22719487 aaattgtcacaaaagttgtaaaaaatggttgttcaaatatca 22719446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 24479283 - 24479242
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    ||||||||||||||||| || || ||||||||||||||||||    
T  24479283 aaattgtcacaaaagttatcaaaaatggttgttcaaatatca 24479242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Original strand, 31249548 - 31249589
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  31249548 aaattgtcacaaaagttgtaaaaaatggttgttcaaatatca 31249589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 927 - 972
Target Start/End: Complemental strand, 34614096 - 34614052
Alignment:
Q  927 gattttaaaaacatttattgaaatgtaatgattattctttaaagtc 972  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||    
T  34614096 gattttaaaaacatttattgaaatgt-atgactattcttcaaagtc 34614052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000002; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 619 - 703
Target Start/End: Original strand, 21752759 - 21752842
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcat 703  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||| | |||| |||||||||||| |||| |||||    
T  21752759 cattgtttttgaccaatgaaaagagagaaaaaa-taaattgtcacaaaagttgtttcatattgttgttcaaataacactactcat 21752842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 1005
Target Start/End: Complemental strand, 18443258 - 18443181
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||||||| || ||||||  |||     || ||||||||| || |||||||||||||||    
T  18443258 tagggattttaaaaacatttattgaaatgtaaggactattctcaaaa-----tcgtgcaaaatgtagggaccaaaaacatatt 18443181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 973
Target Start/End: Original strand, 20544145 - 20544195
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    ||||||||||||||||||||||||||||| || || |||| ||||||||||    
T  20544145 tagggattttaaaaacatttattgaaatgcaaggactattgtttaaagtca 20544195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 660 - 706
Target Start/End: Original strand, 21858888 - 21858934
Alignment:
Q  660 tcacaaaagttgtctaatatggttgttcaaatatcactgctcattaa 706  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  21858888 tcacaaaagttgtttaaaatggttgttcaaatatcactactcattaa 21858934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 657 - 702
Target Start/End: Original strand, 10591290 - 10591335
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcactgctca 702  Q
    |||||||||||||||||| | |||||||||||||||||||| ||||    
T  10591290 ttgtcacaaaagttgtctcaaatggttgttcaaatatcactactca 10591335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 953
Target Start/End: Original strand, 18443614 - 18443646
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||||    
T  18443614 tatagggattttaaaaacatttattgaaatgta 18443646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 663 - 703
Target Start/End: Original strand, 25887727 - 25887767
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcactgctcat 703  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  25887727 caaaagttgtctaaaatggttgttcaaatatcactactcat 25887767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 657 - 705
Target Start/End: Original strand, 26153798 - 26153846
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcactgctcatta 705  Q
    |||||||| ||||||||| ||||| |||||||||||||||| |||||||    
T  26153798 ttgtcacataagttgtctcatatgtttgttcaaatatcactactcatta 26153846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 884765 - 884734
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  884765 tagggattttaaaaacatttattgaaatgtaa 884734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 1244094 - 1244063
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  1244094 tagggattttaaaaacatttattgaaatgtaa 1244063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 619 - 702
Target Start/End: Complemental strand, 5198730 - 5198647
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatg-gttgttcaaatatcactgctca 702  Q
    |||||||||||||| ||||||||||||        ||||| ||||| ||||||||||| ||| ||||||||||||||||||||||    
T  5198730 cattgtttttgaccgatgaaaagagagaaaaaag-aaattatcacataagttgtctaaaatgagttgttcaaatatcactgctca 5198647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 704
Target Start/End: Original strand, 12142022 - 12142069
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcactgctcatt 704  Q
    |||||||||||||||| | | |||||||||||||||||||| ||||||    
T  12142022 ttgtcacaaaagttgtatcaaatggttgttcaaatatcactactcatt 12142069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Original strand, 28898467 - 28898498
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  28898467 tagggattttaaaaacatttattgaaatgtaa 28898498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 37511752 - 37511795
Alignment:
Q  154 gcgttggcagcggcgaactcgccgtgaaaccaagcgaggattgc 197  Q
    |||||||| |||||||||||||||||||||||||| || |||||    
T  37511752 gcgttggcggcggcgaactcgccgtgaaaccaagcaagcattgc 37511795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 41298327 - 41298296
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  41298327 tagggattttaaaaacatttattgaaatgtaa 41298296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 663 - 697
Target Start/End: Complemental strand, 155908 - 155874
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||| ||||||||||||||||||||    
T  155908 caaaagttgtctaaaatggttgttcaaatatcact 155874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 657 - 695
Target Start/End: Complemental strand, 13152637 - 13152599
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  13152637 ttgtcacaaaagttgtcaaaaatggttgttcaaatatca 13152599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 33847948 - 33847918
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  33847948 tagggattttaaaaacatttattgaaatgta 33847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 29784386 - 29784427
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    ||||||||||||||| |||||||||||||||| || ||||||    
T  29784386 tagggattttaaaaatatttattgaaatgtaaagactattct 29784427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 928 - 973
Target Start/End: Original strand, 49053719 - 49053764
Alignment:
Q  928 attttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||||||||||||||||||||||| ||||| |||| || |||||||    
T  49053719 attttaaaaacatttattgaaatgcaatgactatttttcaaagtca 49053764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000002; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 923 - 973
Target Start/End: Original strand, 29691746 - 29691796
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    |||||||||||||||||||||||||||||||| || |||| ||||||||||    
T  29691746 tagggattttaaaaacatttattgaaatgtaaagactattttttaaagtca 29691796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 620 - 692
Target Start/End: Complemental strand, 38844459 - 38844388
Alignment:
Q  620 attgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaata 692  Q
    ||||||||||||||||||||||||||       ||| |||||||||||||||||| |||||||||||||||||    
T  38844459 attgtttttgaccaatgaaaagagagagaaaa-taagttgtcacaaaagttgtctcatatggttgttcaaata 38844388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 619 - 697
Target Start/End: Original strand, 31275247 - 31275324
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||| | | ||||||||||||||||||||    
T  31275247 cattgtttttgaccaatgaaaagagagaaaaaag-aaattgtcacaaaagttgtatcaaatggttgttcaaatatcact 31275324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 619 - 703
Target Start/End: Complemental strand, 5234441 - 5234358
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcactgctcat 703  Q
    ||||||||||||||||| |||||||||        ||||||||||||||||||| | | |||||||||||||||||||| |||||    
T  5234441 cattgtttttgaccaataaaaagagagaaaaaaa-aaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactcat 5234358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 620 - 697
Target Start/End: Complemental strand, 25523165 - 25523089
Alignment:
Q  620 attgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    ||||||||||||||||||||||||||       ||| || ||||||||||||||| ||||||||||||||||| ||||    
T  25523165 attgtttttgaccaatgaaaagagagagaaaa-taagttatcacaaaagttgtctcatatggttgttcaaataacact 25523089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 1005
Target Start/End: Complemental strand, 28505291 - 28505214
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||||||| || ||||||  |||     || ||||||||| || |||||||||||||||    
T  28505291 tagggattttaaaaacatttattgaaatgtaaggactattctcaaaa-----tcgtgcaaaatgtagggaccaaaaacatatt 28505214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 924 - 973
Target Start/End: Complemental strand, 10580122 - 10580073
Alignment:
Q  924 agggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    ||||||||||||||||||||||||||||||| || |||| || |||||||    
T  10580122 agggattttaaaaacatttattgaaatgtaaggactatttttcaaagtca 10580073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 657 - 702
Target Start/End: Original strand, 15596534 - 15596579
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcactgctca 702  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||    
T  15596534 ttgtcacaaaagttgtttaaaatggttgttcaaatatcactactca 15596579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Complemental strand, 28957393 - 28957352
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  28957393 tagggattttaaaaacatttattgaaatgtagggattattct 28957352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Complemental strand, 31227961 - 31227920
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  31227961 tagggattttaaaaacatttattgaaatgtagggattattct 31227920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 1005
Target Start/End: Original strand, 47058514 - 47058592
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||||||| || ||||  ||||| | ||    |||||||| || |||||||||||||||    
T  47058514 tagggattttaaaaacatttattgaaatgtaaagactattaattaaaatgag----gcaaaatgtagggaccaaaaacatatt 47058592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 619 - 697
Target Start/End: Complemental strand, 51717254 - 51717177
Alignment:
Q  619 cattgtttttgaccaatgaaaagagagnnnnnnntaaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    ||||| |||||||||||||||||||||        ||||||||||| ||||||||| ||||| ||||||||||||||||    
T  51717254 cattgattttgaccaatgaaaagagagaaaaaag-aaattgtcacataagttgtctcatatgattgttcaaatatcact 51717177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 657 - 697
Target Start/End: Original strand, 1033286 - 1033326
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  1033286 ttgtcacaaaagttgtttaaaatggttgttcaaatatcact 1033326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 657 - 697
Target Start/End: Complemental strand, 5123523 - 5123483
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  5123523 ttgtcacaaaagttgtctcatatggttgttcaaataacact 5123483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 657 - 701
Target Start/End: Original strand, 51389454 - 51389498
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaatatcactgctc 701  Q
    |||||||||||||||| | | ||||||||||||||||||||||||    
T  51389454 ttgtcacaaaagttgtatcaaatggttgttcaaatatcactgctc 51389498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 1317143 - 1317112
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  1317143 tagggattttaaaaacatttattgaaatgtaa 1317112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 696
Target Start/End: Original strand, 3286952 - 3286995
Alignment:
Q  653 taaattgtcacaaaagttgtctaatatggttgttcaaatatcac 696  Q
    |||||||||||||||||||| | | |||||||||||||||||||    
T  3286952 taaattgtcacaaaagttgtgtgaaatggttgttcaaatatcac 3286995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Original strand, 12923080 - 12923111
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  12923080 tagggattttaaaaacatttattgaaatgtaa 12923111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 21235110 - 21235079
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  21235110 tagggattttaaaaacatttattgaaatgtaa 21235079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 30545796 - 30545765
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  30545796 tagggattttaaaaacatttattgaaatgtaa 30545765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 43979640 - 43979609
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  43979640 tagggattttaaaaacatttattgaaatgtaa 43979609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Original strand, 46263073 - 46263104
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  46263073 tagggattttaaaaacatttattgaaatgtaa 46263104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 47053844 - 47053813
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  47053844 tagggattttaaaaacatttattgaaatgtaa 47053813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 692
Target Start/End: Complemental strand, 53583061 - 53583026
Alignment:
Q  657 ttgtcacaaaagttgtctaatatggttgttcaaata 692  Q
    |||||||||||||||||| |||||||||||||||||    
T  53583061 ttgtcacaaaagttgtctcatatggttgttcaaata 53583026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 2669089 - 2669059
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  2669089 tagggattttaaaaacatttattgaaatgta 2669059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 2669445 - 2669475
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  2669445 tagggattttaaaaacatttattgaaatgta 2669475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 12108296 - 12108326
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  12108296 tagggattttaaaaacatttattgaaatgta 12108326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 12922724 - 12922694
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  12922724 tagggattttaaaaacatttattgaaatgta 12922694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 17288380 - 17288410
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  17288380 tagggattttaaaaacatttattgaaatgta 17288410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 28957749 - 28957779
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  28957749 tagggattttaaaaacatttattgaaatgta 28957779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 31228317 - 31228347
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  31228317 tagggattttaaaaacatttattgaaatgta 31228347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 38026114 - 38026144
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  38026114 tagggattttaaaaacatttattgaaatgta 38026144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 40841544 - 40841514
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  40841544 tagggattttaaaaacatttattgaaatgta 40841514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 40841900 - 40841930
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  40841900 tagggattttaaaaacatttattgaaatgta 40841930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 926 - 972
Target Start/End: Complemental strand, 54142405 - 54142359
Alignment:
Q  926 ggattttaaaaacatttattgaaatgtaatgattattctttaaagtc 972  Q
    ||||||||||||||||||||||||||||  || ||||||| ||||||    
T  54142405 ggattttaaaaacatttattgaaatgtatggactattcttcaaagtc 54142359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 965
Target Start/End: Complemental strand, 54167577 - 54167535
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctt 965  Q
    |||||||||||||||||||||||||||| ||| || |||||||    
T  54167577 tagggattttaaaaacatttattgaaatataaggactattctt 54167535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 973
Target Start/End: Original strand, 54168830 - 54168880
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtca 973  Q
    ||||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  54168830 tagggattttaaaaatatttattaaaatgtagggattattcttcaaagtca 54168880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 55347976 - 55348006
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  55347976 tagggattttaaaaacatttattgaaatgta 55348006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 37297096 - 37297055
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    |||||||||||||||||||  || ||||||||||||||||||    
T  37297096 aaattgtcacaaaagttgtaaaaaatggttgttcaaatatca 37297055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 654 - 695
Target Start/End: Complemental strand, 45083028 - 45082987
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatca 695  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  45083028 aaattatcacaaaagttgtcaaaaatggttgttcaaatatca 45082987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 926 - 971
Target Start/End: Original strand, 49426362 - 49426407
Alignment:
Q  926 ggattttaaaaacatttattgaaatgtaatgattattctttaaagt 971  Q
    |||||||||||| |||||||||||||||| || |||| ||||||||    
T  49426362 ggattttaaaaatatttattgaaatgtaaggactattatttaaagt 49426407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000006; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 923 - 964
Target Start/End: Complemental strand, 6162327 - 6162286
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  6162327 tagggattttaaaaacatttattgaaatgtaatgactattct 6162286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 969
Target Start/End: Complemental strand, 15147800 - 15147754
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaa 969  Q
    |||||||||||||||||||||||||||||||  ||||||||| ||||    
T  15147800 tagggattttaaaaacatttattgaaatgtagggattattctctaaa 15147754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 1005
Target Start/End: Complemental strand, 14712913 - 14712835
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||||||| || |||| || ||    ||| | |||||||| || |||||||||||||||    
T  14712913 tagggattttaaaaacatttattgaaatgtaaggactatttttcaa----agtgacgcaaaatgtagggaccaaaaacatatt 14712835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Original strand, 20824602 - 20824643
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  20824602 tagggattttaaaaacatttattgaaatgtagggattattct 20824643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 969
Target Start/End: Original strand, 19579207 - 19579255
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgtaatgattattctttaaa 969  Q
    ||||||||||||||||||||||||||||||| |  || |||||||||||    
T  19579207 tatagggattttaaaaacatttattgaaatgcagagactattctttaaa 19579255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 969
Target Start/End: Original strand, 19595654 - 19595702
Alignment:
Q  921 tatagggattttaaaaacatttattgaaatgtaatgattattctttaaa 969  Q
    ||||||||||||||||| |||||||||||||||  || |||||||||||    
T  19595654 tatagggattttaaaaatatttattgaaatgtagggactattctttaaa 19595702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 697
Target Start/End: Original strand, 30733144 - 30733187
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatggttgttcaaatatcact 697  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||    
T  30733144 aaattgtcacaaaagttgtctcaaatggttgtttaaatatcact 30733187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 33107012 - 33106981
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  33107012 tagggattttaaaaacatttattgaaatgtaa 33106981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 6162695 - 6162725
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  6162695 tagggattttaaaaacatttattgaaatgta 6162725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 14257229 - 14257199
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  14257229 tagggattttaaaaacatttattgaaatgta 14257199  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Original strand, 14257585 - 14257615
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  14257585 tagggattttaaaaacatttattgaaatgta 14257615  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 953
Target Start/End: Complemental strand, 20824246 - 20824216
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgta 953  Q
    |||||||||||||||||||||||||||||||    
T  20824246 tagggattttaaaaacatttattgaaatgta 20824216  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 663 - 697
Target Start/End: Original strand, 24752375 - 24752409
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||| ||||||||||||||||||||    
T  24752375 caaaagttgtctaaaatggttgttcaaatatcact 24752409  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 663 - 697
Target Start/End: Complemental strand, 26378312 - 26378278
Alignment:
Q  663 caaaagttgtctaatatggttgttcaaatatcact 697  Q
    |||||||||||||| ||||||||||||||||||||    
T  26378312 caaaagttgtctaaaatggttgttcaaatatcact 26378278  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 925 - 970
Target Start/End: Original strand, 8710349 - 8710394
Alignment:
Q  925 gggattttaaaaacatttattgaaatgtaatgattattctttaaag 970  Q
    ||||||||||||||||||| |||||||||| || ||||||| ||||    
T  8710349 gggattttaaaaacatttaatgaaatgtaaggactattcttcaaag 8710394  T

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Target: scaffold0148 (Bit Score: 34; Significance: 0.000000002; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 1005
Target Start/End: Original strand, 33001 - 33079
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattctttaaagtcagtcatgcaaaatgcagagaccaaaaacatatt 1005  Q
    |||||||||||||||||||||||||||||||| || ||||  ||||| | ||    |||||||| || |||||||||||||||    
T  33001 tagggattttaaaaacatttattgaaatgtaaggactattaattaaaatgag----gcaaaatgtagggaccaaaaacatatt 33079  T

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Target: scaffold0148; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 923 - 954
Target Start/End: Complemental strand, 29357 - 29326
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaa 954  Q
    ||||||||||||||||||||||||||||||||    
T  29357 tagggattttaaaaacatttattgaaatgtaa 29326  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 964
Target Start/End: Complemental strand, 39503 - 39462
Alignment:
Q  923 tagggattttaaaaacatttattgaaatgtaatgattattct 964  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  39503 tagggattttaaaaacatttattgaaatgtagggattattct 39462  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 654 - 701
Target Start/End: Original strand, 124288 - 124336
Alignment:
Q  654 aaattgtcacaaaagttgtctaatatg-gttgttcaaatatcactgctc 701  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||||    
T  124288 aaattgtcacataagttgtctaaaatgagttgttcaaatatcactgctc 124336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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