View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0063-2-Insertion-8 (Length: 505)

Name: NF0063-2-Insertion-8
Description: NF0063-2
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0063-2-Insertion-8
NF0063-2-Insertion-8
[»] chr1 (3 HSPs)
chr1 (7-505)||(24429707-24430205)
chr1 (12-493)||(29992400-29992881)
chr1 (7-493)||(16504446-16504932)
[»] chr3 (4 HSPs)
chr3 (33-478)||(53015293-53015738)
chr3 (43-299)||(27684108-27684364)
chr3 (204-296)||(47936605-47936697)
chr3 (261-296)||(47630133-47630168)
[»] chr5 (2 HSPs)
chr5 (28-482)||(17409237-17409687)
chr5 (44-295)||(40123952-40124203)
[»] chr4 (3 HSPs)
chr4 (228-493)||(2385791-2386056)
chr4 (204-296)||(46821997-46822089)
chr4 (252-296)||(10051788-10051832)
[»] chr8 (2 HSPs)
chr8 (345-493)||(2511092-2511240)
chr8 (199-493)||(3057485-3057774)
[»] chr7 (1 HSPs)
chr7 (15-152)||(12559308-12559445)


Alignment Details
Target: chr1 (Bit Score: 467; Significance: 0; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 7 - 505
Target Start/End: Complemental strand, 24430205 - 24429707
Alignment:
Q  7 atcgtcaactcgtaggcagcttgatttaccttactgttactcgaccagatatctcttatgttgttcatttagttagtcaattcatgaatgccccacggag 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  24430205 atcgtcaactcgtaggcagcttgatttaccttactgttactcgaccagatatctcttatgctgttcatttagttagtcaattcatgaatgccccacagag 24430106  T
Q  107 cacccattatgttgctgttcttcgaatcattcggtatatcaagggtactatgtttcatggtcttcactattcagtcacatctcccttgattcttagagcc 206  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24430105 cacccattatgctgctgttcttcgaatcattcggtatatcaagggtactatgtttcatggtcttcaatattcagtcacatctcccttgattcttagagcc 24430006  T
Q  207 tactctgatgcagattgggcaggtgatcccagtgaccgtcgctctactactggtttttgtatttttcttggagactctcttatttcttggcgtagcaaga 306  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24430005 tactctgatgcagattgggcaggtgatccaagtgaccgtcgctctactactggtttttgtatttttcttggagactctcttatttcttggcgtagcaaga 24429906  T
Q  307 aacaaactctgacagctcgctctagtacagaagctgagtatcgtgcccttgctgatactacatctgagatattgtggcttcgttggcttcttgctgattt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24429905 aacaaactctgacagctcgctctagtacagaagctgagtatcgtgcccttgctgatactacatctgagatattgtggcttcgttggcttcttgctgattt 24429806  T
Q  407 agagacatctcaatcttcacctgttgatctttattgtgacaatcgcagtgccattcaaattgcccacgatgatgttttccaggagcgcactaagcatat 505  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  24429805 agagacatctcaatcttcacctattgatctttattgtgacaatcgcagtgccattcaaattgcccacaatgatgttttccatgagcgcactaagcatat 24429707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 12 - 493
Target Start/End: Original strand, 29992400 - 29992881
Alignment:
Q  12 caactcgtaggcagcttgatttaccttactgttactcgaccagatatctcttatgttgttcatttagttagtcaattcatgaatgccccacggagcaccc 111  Q
    ||||||||||| ||  |||| ||||| |||||||| || |||||||| || |||||||||||| | ||||| |||||||||| | | ||||| | ||| |    
T  29992400 caactcgtaggtagtctgatatacctcactgttacacggccagatatttcatatgttgttcatcttgttagccaattcatgacttctccacgtaccacac 29992499  T
Q  112 attatgttgctgttcttcgaatcattcggtatatcaagggtactatgtttcatggtcttcactattcagtcacatctcccttgattcttagagcctactc 211  Q
    ||||||  ||||| ||||| || ||||| ||||||||||||||  | ||| |||||||||| || |||   |||||||| ||||||||||||||||||||    
T  29992500 attatgcagctgtccttcggattattcgatatatcaagggtaccttattttatggtcttcattactcaaatacatctccattgattcttagagcctactc 29992599  T
Q  212 tgatgcagattgggcaggtgatcccagtgaccgtcgctctactactggtttttgtatttttcttggagactctcttatttcttggcgtagcaagaaacaa 311  Q
    |||||| |||||||| |||||||| ||||| || || || || |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  29992600 tgatgccgattgggctggtgatcctagtgatcgccgttccaccactggtttttgtatttttcttggagattctcttatatcttggcgtagcaagaaacaa 29992699  T
Q  312 actctgacagctcgctctagtacagaagctgagtatcgtgcccttgctgatactacatctgagatattgtggcttcgttggcttcttgctgatttagaga 411  Q
    ||  ||   ||||||||||| || || | ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  29992700 accttggtggctcgctctagcactgaggttgaatatcgtgctcttgctgatactacttctgagatattgtggcttcgttggcttcttgctgatttagaga 29992799  T
Q  412 catctcaatcttcacctgttgatctttattgtgacaatcgcagtgccattcaaattgcccacgatgatgttttccaggagcg 493  Q
    |||| ||||||||||    |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  29992800 catcacaatcttcactaactgatctatattgtgataatcgcagtgccattcaaattgcccacaatgatgttttccatgagcg 29992881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 7 - 493
Target Start/End: Original strand, 16504446 - 16504932
Alignment:
Q  7 atcgtcaactcgtaggcagcttgatttaccttactgttactcgaccagatatctcttatgttgttcatttagttagtcaattcatgaatgccccacggag 106  Q
    |||| ||||||||||| ||  |||| ||||  ||||||||||| || ||||| || |||||| ||||| | ||||| |||||||||  | | ||||| |     
T  16504446 atcggcaactcgtaggtagtctgatataccgcactgttactcggccggatatttcatatgttattcatcttgttagccaattcatggcttctccacgtac 16504545  T
Q  107 cacccattatgttgctgttcttcgaatcattcggtatatcaagggtactatgtttcatggtcttcactattcagtcacatctcccttgattcttagagcc 206  Q
    ||| ||||||| || ||| ||||| || ||  ||||||||||||||||  | ||| |||||||||| || ||||  |||||  |  |||||||||||||     
T  16504546 cacacattatgatgttgtccttcggattatatggtatatcaagggtaccttattttatggtcttcattactcagctacatcctcgctgattcttagagca 16504645  T
Q  207 tactctgatgcagattgggcaggtgatcccagtgaccgtcgctctactactggtttttgtatttttcttggagactctcttatttcttggcgtagcaaga 306  Q
    || |||||||  |||||||| |||||||| ||| ||||||| || || ||| |||||||||||||||||||||| |||||||| || |||| ||||||||    
T  16504646 tattctgatgtcgattgggccggtgatcctagttaccgtcgttccaccactagtttttgtatttttcttggagattctcttatatcgtggcatagcaaga 16504745  T
Q  307 aacaaactctgacagctcgctctagtacagaagctgagtatcgtgcccttgctgatactacatctgagatattgtggcttcgttggcttcttgctgattt 406  Q
    |||||||  || ||||||||||||| || |||| ||| |||||||| || ||| ||| ||| || ||||| ||||||||||||||||||||||  |||||    
T  16504746 aacaaaccttggcagctcgctctagcactgaagatgaatatcgtgctctcgctaatattacttcagagattttgtggcttcgttggcttcttgaagattt 16504845  T
Q  407 agagacatctcaatcttcacctgttgatctttattgtgacaatcgcagtgccattcaaattgcccacgatgatgttttccaggagcg 493  Q
    ||||||||| || ||||||||   |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  16504846 agagacatcacagtcttcaccaactgatctatattgtgacaatcgcattgccattcaaattgcccacaatgatgttttccacgagcg 16504932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 33 - 478
Target Start/End: Complemental strand, 53015738 - 53015293
Alignment:
Q  33 taccttactgttactcgaccagatatctcttatgttgttcatttagttagtcaattcatgaatgccccacggagcacccattatgttgctgttcttcgaa 132  Q
    ||||| ||||||||||| |||||||| || |||||||||||| | ||||| |||||||||  | | ||||| | ||| ||||| | |||||| ||||| |    
T  53015738 tacctcactgttactcggccagatatttcatatgttgttcatcttgttagccaattcatggcttctccacgtaccacacattacgctgctgtccttcgga 53015639  T
Q  133 tcattcggtatatcaagggtactatgtttcatggtcttcactattcagtcacatctcccttgattcttagagcctactctgatgcagattgggcaggtga 232  Q
    |  ||||||||||| |||||||| | ||| |||||||||| || |||   |||||||| |||||||||||||||||||||||||  |||||||| |||||    
T  53015638 tttttcggtatatctagggtactttattttatggtcttcattactcatctacatctccattgattcttagagcctactctgatgtcgattgggccggtga 53015539  T
Q  233 tcccagtgaccgtcgctctactactggtttttgtatttttcttggagactctcttatttcttggcgtagcaagaaacaaactctgacagctcgctctagt 332  Q
    ||| ||||| ||||| || || ||||  |||||||||||||||||||| |||||||| |||||| ||||||||||||||||  |||||||||||| |||     
T  53015538 tcctagtgatcgtcgttccaccactgaattttgtatttttcttggagattctcttatatcttggtgtagcaagaaacaaaccttgacagctcgctttagc 53015439  T
Q  333 acagaagctgagtatcgtgcccttgctgatactacatctgagatattgtggcttcgttggcttcttgctgatttagagacatctcaatcttcacctgttg 432  Q
    || |||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||    ||    
T  53015438 actgaagctgaatatcgtgctcttgctgatactacttctgagatattgtgggttcgttggcttcttgttgatttagagacatcacaatcttcacaaactg 53015339  T
Q  433 atctttattgtgacaatcgcagtgccattcaaattgcccacgatga 478  Q
    |||| |||||||||||| | ||||| ||||||||||||||| ||||    
T  53015338 atctatattgtgacaatagaagtgcgattcaaattgcccacaatga 53015293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 299
Target Start/End: Original strand, 27684108 - 27684364
Alignment:
Q  43 ttactcgaccagatatctcttatgttgttcatttagttagtcaattcatgaatgccccacggagcacccattatgttgctgttcttcgaatcattcggta 142  Q
    ||||||||||| |||| || |||||||||||| | ||||| |||||||||| | |  || | | ||| |||||||||| ||| || | ||| ||||||||    
T  27684108 ttactcgaccatatatttcatatgttgttcatcttgttagccaattcatgacttcttcatgtaccacacattatgttggtgtcctccaaattattcggta 27684207  T
Q  143 tatcaagggtactatgtttcatggtcttcactattcagtcacatctcccttgattcttagagcctactctgatgcagattgggcaggtgatcccagtgac 242  Q
    ||||||||||| | | ||| ||||| |||| || ||||| ||||   | |||||||||||  ||||||||||||| |||||||| |||||||| ||||||    
T  27684208 tatcaagggtagtttattttatggtattcattactcagttacattctcattgattcttagttcctactctgatgccgattgggccggtgatcctagtgac 27684307  T
Q  243 cgtcgctctactactggtttttgtatttttcttggagactctcttatttcttggcgt 299  Q
    | ||  || || ||| ||||||| || |||| |||||| |||||||| ||| |||||    
T  27684308 catcattccaccactagtttttggatgtttcatggagattctcttatatctcggcgt 27684364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 296
Target Start/End: Complemental strand, 47936697 - 47936605
Alignment:
Q  204 gcctactctgatgcagattgggcaggtgatcccagtgaccgtcgctctactactggtttttgtatttttcttggagactctcttatttcttgg 296  Q
    ||||| || |||||||||||||| |||||||| |  || |||   || ||||| || |||||||| |||||||||||||||||||||||||||    
T  47936697 gcctattcagatgcagattgggctggtgatccgacagatcgtaagtccactacagggttttgtatatttcttggagactctcttatttcttgg 47936605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 296
Target Start/End: Complemental strand, 47630168 - 47630133
Alignment:
Q  261 ttttgtatttttcttggagactctcttatttcttgg 296  Q
    |||||||| |||||||||||||||||||||||||||    
T  47630168 ttttgtatatttcttggagactctcttatttcttgg 47630133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 1e-66; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 28 - 482
Target Start/End: Complemental strand, 17409687 - 17409237
Alignment:
Q  28 tgatttaccttactgttactcgaccagatatctcttatgttgttcatttagttagtcaattcatgaatgccccacggagcacccattatgttgctgttct 127  Q
    |||| ||||| ||||||||  |||||||||| || |||||||||||| | ||||| |||||||||| | | ||| | | ||| |||||||  | ||| ||    
T  17409687 tgatatacctcactgttacatgaccagatatttcatatgttgttcatcttgttagccaattcatgacttctccatgtaccacacattatgcagatgtcct 17409588  T
Q  128 tcgaatcattcggtatatcaagggtactatgtttcatggtcttcactattcagtcacatctcccttgattcttagagcctactctgatgcagattgggca 227  Q
    ||  || ||| | ||||||||||||||  | ||| ||||||||||  | |||   |||||||| |||||||||||||||||||||||||| ||||||||     
T  17409587 tcagattatttgatatatcaagggtaccttattttatggtcttcataactcaaatacatctccattgattcttagagcctactctgatgccgattgggcc 17409488  T
Q  228 ggtgatcccagtgaccgtcgctctactactggtttttgtatttttcttggagactctcttatttcttggcgtagcaagaaacaaactctgacagctcgct 327  Q
    |||||||| |||||  | |  || || ||| |||||||||  |||||||| || |||||||| |||||||||||||| ||||||||  ||   |||||||    
T  17409487 ggtgatcctagtgattgccattccaccactagtttttgtaaatttcttgg-gattctcttatatcttggcgtagcaataaacaaacattggtggctcgct 17409389  T
Q  328 ctagtacagaagctgagtatcgtgcccttgctgatactacatctgagatattgtggcttcgttggcttcttgctgatttagagacatctcaatcttcacc 427  Q
    |||| || |||||||| |||||||| ||||   ||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||     
T  17409388 ctagcaccgaagctgaatatcgtgcacttg---atactacttctgagatattgtggcttcgttggctttttgctgatttaaagacatcacaatcttcact 17409292  T
Q  428 tgttgatctttattgtgacaatcgcagtgccattcaaattgcccacgatgatgtt 482  Q
       |||||| |||||||| ||||||| ||||||| |||| | |||| ||||||||    
T  17409291 aactgatctatattgtgataatcgcattgccatttaaatcgtccacaatgatgtt 17409237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 44 - 295
Target Start/End: Complemental strand, 40124203 - 40123952
Alignment:
Q  44 tactcgaccagatatctcttatgttgttcatttagttagtcaattcatgaatgccccacggagcacccattatgttgctgttcttcgaatcattcggtat 143  Q
    |||||||||  |||| || ||| |||||||| | |||||  ||||||||  | | ||||| ||||| |||||||||| ||| ||| | || |||||||||    
T  40124203 tactcgaccgaatatttcatattttgttcatcttgttagctaattcatggcttctccacgtagcacacattatgttgttgtcctttggattattcggtat 40124104  T
Q  144 atcaagggtactatgtttcatggtcttcactattcagtcacatctcccttgattcttagagcctactctgatgcagattgggcaggtgatcccagtgacc 243  Q
     |||||||  || | ||| ||| |||||| || |||   ||||| || || ||||||||| |||||||||||||  ||||||| |||||||| ||| |      
T  40124103 gtcaagggccctttattttatgatcttcattactcaactacatccccattaattcttagaccctactctgatgccaattgggctggtgatcctagtaatt 40124004  T
Q  244 gtcgctctactactggtttttgtatttttcttggagactctcttatttcttg 295  Q
    |||| || || |||||||||||||||||||||||| | |||||||| |||||    
T  40124003 gtcgttccaccactggtttttgtatttttcttggaaattctcttatatcttg 40123952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 228 - 493
Target Start/End: Complemental strand, 2386056 - 2385791
Alignment:
Q  228 ggtgatcccagtgaccgtcgctctactactggtttttgtatttttcttggagactctcttatttcttggcgtagcaagaaacaaactctgacagctcgct 327  Q
    |||||||| ||||| | ||| || || ||| |||||||||||||||||||| | |||||||| |||||||||||||||||||||||  |||  |||||||    
T  2386056 ggtgatcctagtgatcatcgttccaccacttgtttttgtatttttcttggatattctcttatatcttggcgtagcaagaaacaaacattgatggctcgct 2385957  T
Q  328 ctagtacagaagctgagtatcgtgcccttgctgatactacatctgagatattgtggcttcgttggcttcttgctgatttagagacatctcaatcttcacc 427  Q
    |||| || |||||||| ||| |||   ||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| || ||||||||    
T  2385956 ctagcactgaagctgaatattgtgttgttgctgatactacttctgagatattatggcttcgttggtttcttgctgatttagagacatcacagtcttcacc 2385857  T
Q  428 tgttgatctttattgtgacaatcgcagtgccattcaaattgcccacgatgatgttttccaggagcg 493  Q
       || | | ||||||||||||  || ||||||||||||||| ||| ||||||||||||| |||||    
T  2385856 aactggtatatattgtgacaattacattgccattcaaattgctcacaatgatgttttccatgagcg 2385791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 296
Target Start/End: Original strand, 46821997 - 46822089
Alignment:
Q  204 gcctactctgatgcagattgggcaggtgatcccagtgaccgtcgctctactactggtttttgtatttttcttggagactctcttatttcttgg 296  Q
    ||||| || |||||||||||||| |||||||| |  || |||   || ||||| || |||||||| |||||||||||||||||||||||||||    
T  46821997 gcctattcagatgcagattgggctggtgatccgacagatcgtaagtccactacagggttttgtatatttcttggagactctcttatttcttgg 46822089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 10051832 - 10051788
Alignment:
Q  252 actactggtttttgtatttttcttggagactctcttatttcttgg 296  Q
    ||||| || |||||||| |||||||||||||||||||||||||||    
T  10051832 actacagggttttgtatatttcttggagactctcttatttcttgg 10051788  T

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Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 345 - 493
Target Start/End: Original strand, 2511092 - 2511240
Alignment:
Q  345 tatcgtgcccttgctgatactacatctgagatattgtggcttcgttggcttcttgctgatttagagacatctcaatcttcacctgttgatctttattgtg 444  Q
    |||||||| |||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| || ||||||||   |||||| |||||||    
T  2511092 tatcgtgctcttgctgatactacttttaagatattgtggcttcgttggcttcttgctgatttagagacatcacagtcttcaccaactgatctatattgtg 2511191  T
Q  445 acaatcgcagtgccattcaaattgcccacgatgatgttttccaggagcg 493  Q
     |||||| ||||| ||||||||||||||| ||||||||||||| |||||    
T  2511192 gcaatcgtagtgcaattcaaattgcccacaatgatgttttccatgagcg 2511240  T

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Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 199 - 493
Target Start/End: Original strand, 3057485 - 3057774
Alignment:
Q  199 ttagagcctactctgatgcagattgggcaggtgatcccagtgaccgtcgctctactactggtttttgtatttt---tcttggagactctcttatttcttg 295  Q
    |||||||||||||| |||  |||||||| |||||||| ||||| |   | || || |||| |||||| |||||   ||||||||| | |||||| |||||    
T  3057485 ttagagcctactctaatgtcgattgggccggtgatcctagtgatcagtgttccaccactgatttttgcattttttttcttggagattgtcttatatcttg 3057584  T
Q  296 gcgtagcaagaaacaaactctgacagctcgctctagtacagaagctgagtatcgtgcccttgctgatactacatctgagatattgtggcttcgttggctt 395  Q
    | ||||||||| |||| || ||   ||||||| ||| || |||| ||| |||||||  |||| ||||||||| | |||||||| ||||||||||||||||    
T  3057585 gtgtagcaagatacaagctttggtggctcgctataggactgaagttgaatatcgtgttcttgttgatactacttttgagatatcgtggcttcgttggctt 3057684  T
Q  396 cttgctgatttagagacatctcaatcttcacctgttgatctttattgtgacaatcgcagtgccattcaaattgcccacgatgatgttttccaggagcg 493  Q
    ||||||||||||||||||||  | |||||||        || |||||||||||||  ||||||||||||||||| ||| ||||||||||||| |||||    
T  3057685 cttgctgatttagagacatcatagtcttcac--------ctatattgtgacaatcatagtgccattcaaattgctcacaatgatgttttccatgagcg 3057774  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 12559308 - 12559445
Alignment:
Q  15 ctcgtaggcagcttgatttaccttactgttactcgaccagatatctcttatgttgttcatttagttagtcaattcatgaatgccccacggagcacccatt 114  Q
    |||||||| || ||||| ||||| | ||||||||| ||| |||| || |||||||||||| |  |||||||||||||| || | || || | ||| ||||    
T  12559308 ctcgtaggtagtttgatatacctcattgttactcggccatatatttcatatgttgttcatcttattagtcaattcatggattctcctcgtaccacacatt 12559407  T
Q  115 atgttgctgttcttcgaatcattcggtatatcaagggt 152  Q
    |||||| ||| ||||  || ||||||||||| ||||||    
T  12559408 atgttgttgtccttctgattattcggtatattaagggt 12559445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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