View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0063_1D_low_19 (Length: 239)

Name: NF0063_1D_low_19
Description: NF0063_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0063_1D_low_19
NF0063_1D_low_19
[»] chr6 (36 HSPs)
chr6 (70-239)||(34644865-34645034)
chr6 (70-239)||(19880131-19880300)
chr6 (70-239)||(18795523-18795692)
chr6 (70-239)||(25769024-25769193)
chr6 (93-239)||(21472457-21472603)
chr6 (70-237)||(19488553-19488720)
chr6 (71-239)||(15460170-15460338)
chr6 (70-194)||(19435835-19435959)
chr6 (77-237)||(5296487-5296647)
chr6 (70-239)||(21563411-21563580)
chr6 (70-239)||(21569270-21569439)
chr6 (77-237)||(8762214-8762374)
chr6 (70-186)||(19454253-19454369)
chr6 (70-194)||(14379241-14379365)
chr6 (70-194)||(14380791-14380915)
chr6 (77-194)||(10468173-10468290)
chr6 (70-237)||(18197006-18197173)
chr6 (70-194)||(28282137-28282261)
chr6 (70-235)||(23079302-23079467)
chr6 (77-194)||(24365252-24365369)
chr6 (70-237)||(18966573-18966740)
chr6 (70-214)||(19865520-19865664)
chr6 (70-239)||(25609140-25609309)
chr6 (70-239)||(22434702-22434871)
chr6 (70-239)||(22443100-22443269)
chr6 (71-210)||(15896928-15897067)
chr6 (70-237)||(20636582-20636749)
chr6 (77-239)||(5838498-5838660)
chr6 (77-239)||(16926919-16927081)
chr6 (70-239)||(16962724-16962893)
chr6 (18-59)||(20634428-20634469)
chr6 (15-48)||(23080218-23080251)
chr6 (18-59)||(25608349-25608390)
chr6 (70-171)||(27566327-27566428)
chr6 (15-47)||(18965795-18965827)
chr6 (16-48)||(23086244-23086276)
[»] scaffold0076 (2 HSPs)
scaffold0076 (70-239)||(32814-32983)
scaffold0076 (70-194)||(56082-56206)
[»] chr7 (37 HSPs)
chr7 (70-239)||(19613634-19613803)
chr7 (71-239)||(19148171-19148339)
chr7 (71-239)||(20747570-20747738)
chr7 (70-239)||(11387549-11387718)
chr7 (70-239)||(15101724-15101893)
chr7 (77-237)||(16949595-16949755)
chr7 (70-239)||(16071416-16071584)
chr7 (70-237)||(12205923-12206090)
chr7 (71-194)||(14285542-14285665)
chr7 (70-194)||(573-697)
chr7 (93-239)||(14263365-14263511)
chr7 (70-204)||(14434650-14434784)
chr7 (77-194)||(12456668-12456785)
chr7 (70-186)||(13666496-13666612)
chr7 (70-194)||(15341390-15341514)
chr7 (70-194)||(18053119-18053243)
chr7 (77-194)||(12457606-12457723)
chr7 (70-214)||(15153825-15153969)
chr7 (70-155)||(15625510-15625595)
chr7 (77-194)||(11305429-11305546)
chr7 (77-194)||(13022323-13022440)
chr7 (70-214)||(15204577-15204721)
chr7 (77-194)||(49153267-49153384)
chr7 (71-214)||(321205-321348)
chr7 (77-237)||(11771386-11771546)
chr7 (77-194)||(26117771-26117888)
chr7 (16-59)||(11770593-11770636)
chr7 (70-237)||(14040653-14040820)
chr7 (70-237)||(14350683-14350850)
chr7 (77-194)||(13967834-13967951)
chr7 (77-180)||(14955519-14955622)
chr7 (77-180)||(18178707-18178810)
chr7 (16-59)||(14262574-14262617)
chr7 (70-189)||(23505041-23505160)
chr7 (70-140)||(14130832-14130902)
chr7 (16-48)||(14041570-14041602)
chr7 (16-48)||(14351600-14351632)
[»] chr2 (24 HSPs)
chr2 (70-239)||(27364753-27364922)
chr2 (70-237)||(23277376-23277543)
chr2 (118-239)||(23099692-23099813)
chr2 (70-194)||(19651771-19651895)
chr2 (70-237)||(23294535-23294702)
chr2 (83-237)||(23111349-23111503)
chr2 (77-194)||(20828866-20828983)
chr2 (77-194)||(20833592-20833709)
chr2 (77-194)||(31831265-31831382)
chr2 (77-239)||(21324940-21325102)
chr2 (70-239)||(24676089-24676258)
chr2 (70-239)||(27209846-27210015)
chr2 (70-237)||(24819362-24819529)
chr2 (70-194)||(27788341-27788465)
chr2 (72-194)||(24949191-24949314)
chr2 (72-214)||(21890417-21890559)
chr2 (77-194)||(1064358-1064475)
chr2 (70-180)||(24876482-24876592)
chr2 (77-239)||(22756139-22756301)
chr2 (134-218)||(24707177-24707261)
chr2 (16-59)||(23073380-23073423)
chr2 (18-59)||(41607268-41607309)
chr2 (70-237)||(21144717-21144884)
chr2 (15-59)||(24819113-24819157)
[»] scaffold0029 (2 HSPs)
scaffold0029 (70-239)||(113559-113728)
scaffold0029 (70-239)||(95139-95308)
[»] chr5 (32 HSPs)
chr5 (70-239)||(21680094-21680263)
chr5 (70-239)||(21890075-21890244)
chr5 (71-214)||(21496957-21497100)
chr5 (70-237)||(24619613-24619780)
chr5 (70-237)||(24715844-24716011)
chr5 (70-237)||(24748872-24749039)
chr5 (70-214)||(21831102-21831246)
chr5 (70-237)||(22462835-22463001)
chr5 (77-237)||(20774649-20774809)
chr5 (70-214)||(20822336-20822480)
chr5 (71-237)||(21563291-21563457)
chr5 (72-237)||(22235238-22235403)
chr5 (77-194)||(24797758-24797875)
chr5 (77-194)||(37542742-37542859)
chr5 (70-194)||(17268695-17268819)
chr5 (77-194)||(20343172-20343289)
chr5 (72-237)||(26738045-26738210)
chr5 (77-194)||(28894303-28894420)
chr5 (77-194)||(28915774-28915891)
chr5 (77-194)||(28923129-28923246)
chr5 (77-194)||(14886352-14886469)
chr5 (77-189)||(23079455-23079567)
chr5 (16-59)||(23473045-23473088)
chr5 (77-194)||(25848965-25849082)
chr5 (77-193)||(22503569-22503685)
chr5 (77-239)||(23517434-23517596)
chr5 (70-239)||(18776671-18776840)
chr5 (70-239)||(23441111-23441280)
chr5 (134-239)||(23574694-23574799)
chr5 (119-239)||(20800398-20800518)
chr5 (15-59)||(22234445-22234489)
chr5 (70-237)||(20467415-20467582)
[»] chr3 (37 HSPs)
chr3 (70-239)||(14087271-14087440)
chr3 (70-236)||(13971485-13971651)
chr3 (70-239)||(14574521-14574690)
chr3 (71-239)||(10419407-10419575)
chr3 (71-237)||(18133710-18133876)
chr3 (77-234)||(13299889-13300046)
chr3 (77-234)||(13310547-13310704)
chr3 (70-204)||(16380325-16380459)
chr3 (77-234)||(13319869-13320026)
chr3 (70-194)||(31694593-31694717)
chr3 (70-237)||(15228247-15228414)
chr3 (77-239)||(17493235-17493397)
chr3 (70-194)||(31939501-31939625)
chr3 (72-239)||(16827565-16827732)
chr3 (72-186)||(11303188-11303302)
chr3 (83-237)||(15234128-15234282)
chr3 (77-194)||(47124549-47124666)
chr3 (77-194)||(16329067-16329184)
chr3 (134-237)||(12359891-12359994)
chr3 (77-194)||(10384573-10384690)
chr3 (77-194)||(28754923-28755040)
chr3 (70-194)||(4679036-4679160)
chr3 (70-194)||(8758489-8758613)
chr3 (70-194)||(41178120-41178244)
chr3 (70-155)||(15248735-15248820)
chr3 (71-204)||(16835907-16836040)
chr3 (77-186)||(11960584-11960693)
chr3 (77-186)||(16337927-16338036)
chr3 (70-201)||(44777845-44777976)
chr3 (70-122)||(12360021-12360073)
chr3 (70-214)||(15209479-15209623)
chr3 (70-174)||(16692752-16692856)
chr3 (15-59)||(16826774-16826818)
chr3 (15-59)||(17491354-17491398)
chr3 (77-239)||(12498843-12499005)
chr3 (77-214)||(16372007-16372144)
chr3 (70-194)||(13942622-13942746)
[»] scaffold0028 (6 HSPs)
scaffold0028 (70-239)||(49651-49820)
scaffold0028 (70-180)||(9474-9584)
scaffold0028 (70-180)||(15936-16046)
scaffold0028 (70-239)||(753-922)
scaffold0028 (18-59)||(10393-10434)
scaffold0028 (18-59)||(16855-16896)
[»] scaffold0090 (2 HSPs)
scaffold0090 (77-239)||(19856-20018)
scaffold0090 (77-239)||(24018-24180)
[»] scaffold0117 (1 HSPs)
scaffold0117 (87-239)||(6822-6974)
[»] chr8 (38 HSPs)
chr8 (71-239)||(19852447-19852615)
chr8 (71-239)||(19858483-19858651)
chr8 (71-239)||(21841453-21841621)
chr8 (71-194)||(1267274-1267397)
chr8 (71-239)||(20009497-20009665)
chr8 (70-237)||(31416053-31416220)
chr8 (70-239)||(23655962-23656131)
chr8 (93-239)||(20985124-20985270)
chr8 (70-214)||(20389134-20389278)
chr8 (77-237)||(20975230-20975390)
chr8 (77-235)||(22371982-22372140)
chr8 (70-228)||(22051898-22052056)
chr8 (77-194)||(803295-803412)
chr8 (77-194)||(6604700-6604817)
chr8 (77-194)||(6680153-6680270)
chr8 (77-194)||(12305800-12305917)
chr8 (70-194)||(31570464-31570588)
chr8 (70-237)||(22247996-22248163)
chr8 (70-237)||(22988231-22988398)
chr8 (77-239)||(16407622-16407784)
chr8 (80-186)||(29303056-29303162)
chr8 (77-194)||(14566184-14566301)
chr8 (77-194)||(16270846-16270963)
chr8 (70-239)||(19979002-19979171)
chr8 (77-186)||(27355590-27355698)
chr8 (16-59)||(22376239-22376282)
chr8 (16-59)||(22382414-22382457)
chr8 (70-239)||(30312721-30312890)
chr8 (70-214)||(22377056-22377200)
chr8 (70-214)||(22383231-22383375)
chr8 (16-59)||(22422678-22422721)
chr8 (70-168)||(23949954-23950052)
chr8 (70-155)||(20395793-20395878)
chr8 (77-239)||(21166115-21166277)
chr8 (18-59)||(19864880-19864921)
chr8 (18-59)||(21920534-21920575)
chr8 (70-239)||(32601179-32601348)
chr8 (119-155)||(23886108-23886144)
[»] scaffold0108 (1 HSPs)
scaffold0108 (70-239)||(48104-48273)
[»] scaffold0192 (1 HSPs)
scaffold0192 (70-239)||(27524-27693)
[»] scaffold0053 (2 HSPs)
scaffold0053 (72-239)||(48171-48338)
scaffold0053 (70-237)||(56986-57153)
[»] scaffold2112 (1 HSPs)
scaffold2112 (93-239)||(1-147)
[»] scaffold0001 (3 HSPs)
scaffold0001 (70-239)||(89582-89751)
scaffold0001 (70-239)||(90260-90429)
scaffold0001 (16-59)||(494934-494977)
[»] scaffold0244 (1 HSPs)
scaffold0244 (70-239)||(18349-18518)
[»] chr4 (26 HSPs)
chr4 (70-239)||(15002498-15002667)
chr4 (70-234)||(1648416-1648580)
chr4 (70-237)||(8706887-8707054)
chr4 (70-237)||(27901355-27901522)
chr4 (71-237)||(15414162-15414328)
chr4 (70-239)||(15246893-15247062)
chr4 (71-239)||(15078605-15078773)
chr4 (71-212)||(15320120-15320261)
chr4 (70-186)||(15358307-15358423)
chr4 (70-180)||(16148680-16148790)
chr4 (70-180)||(16152826-16152936)
chr4 (77-194)||(3263973-3264090)
chr4 (77-193)||(29452717-29452833)
chr4 (77-194)||(44661045-44661162)
chr4 (78-214)||(14695090-14695226)
chr4 (77-189)||(33223899-33224011)
chr4 (16-59)||(14695999-14696042)
chr4 (77-194)||(11206410-11206527)
chr4 (77-194)||(20891958-20892075)
chr4 (70-186)||(14850293-14850409)
chr4 (16-59)||(14849449-14849492)
chr4 (70-239)||(15146759-15146928)
chr4 (133-239)||(18614698-18614804)
chr4 (70-239)||(18226320-18226489)
chr4 (15-59)||(16149596-16149640)
chr4 (15-59)||(16153742-16153786)
[»] scaffold0751 (1 HSPs)
scaffold0751 (70-238)||(3176-3344)
[»] scaffold0523 (1 HSPs)
scaffold0523 (71-239)||(870-1038)
[»] scaffold0234 (1 HSPs)
scaffold0234 (70-237)||(24211-24378)
[»] scaffold0476 (1 HSPs)
scaffold0476 (70-204)||(2502-2636)
[»] scaffold2094 (1 HSPs)
scaffold2094 (70-235)||(203-368)
[»] scaffold0106 (1 HSPs)
scaffold0106 (70-239)||(32411-32580)
[»] scaffold0026 (3 HSPs)
scaffold0026 (71-239)||(29058-29226)
scaffold0026 (17-59)||(30863-30905)
scaffold0026 (15-59)||(50726-50770)
[»] scaffold0249 (1 HSPs)
scaffold0249 (72-239)||(1110-1276)
[»] scaffold0068 (1 HSPs)
scaffold0068 (70-160)||(34188-34278)
[»] scaffold0165 (1 HSPs)
scaffold0165 (71-239)||(5431-5599)
[»] scaffold0034 (3 HSPs)
scaffold0034 (70-194)||(13083-13207)
scaffold0034 (70-237)||(68370-68537)
scaffold0034 (77-237)||(4092-4252)
[»] scaffold0600 (1 HSPs)
scaffold0600 (70-239)||(4776-4945)
[»] scaffold0404 (1 HSPs)
scaffold0404 (70-239)||(5750-5919)
[»] scaffold0403 (2 HSPs)
scaffold0403 (70-239)||(3791-3960)
scaffold0403 (18-59)||(8291-8332)
[»] scaffold0304 (1 HSPs)
scaffold0304 (70-239)||(2622-2791)
[»] scaffold1288 (1 HSPs)
scaffold1288 (71-239)||(1991-2159)
[»] scaffold0222 (2 HSPs)
scaffold0222 (71-237)||(2494-2660)
scaffold0222 (72-194)||(8062-8184)
[»] scaffold0139 (3 HSPs)
scaffold0139 (77-239)||(286-448)
scaffold0139 (72-171)||(28219-28318)
scaffold0139 (72-171)||(34472-34571)
[»] scaffold0682 (1 HSPs)
scaffold0682 (70-239)||(883-1052)
[»] scaffold0067 (4 HSPs)
scaffold0067 (70-194)||(51362-51486)
scaffold0067 (70-194)||(60396-60520)
scaffold0067 (70-194)||(66784-66908)
scaffold0067 (70-164)||(26400-26494)
[»] chr1 (24 HSPs)
chr1 (77-237)||(24098811-24098971)
chr1 (83-237)||(23197454-23197608)
chr1 (70-194)||(20856011-20856135)
chr1 (70-194)||(20939314-20939438)
chr1 (77-186)||(19662396-19662505)
chr1 (77-194)||(20295403-20295520)
chr1 (72-186)||(19855291-19855405)
chr1 (137-237)||(20835108-20835208)
chr1 (71-204)||(19760114-19760247)
chr1 (77-194)||(31539248-31539365)
chr1 (77-194)||(37678071-37678188)
chr1 (70-180)||(50619509-50619619)
chr1 (77-214)||(22110013-22110150)
chr1 (77-214)||(22113862-22113999)
chr1 (70-237)||(16373513-16373680)
chr1 (14-59)||(20139982-20140027)
chr1 (134-239)||(21025221-21025326)
chr1 (70-180)||(19107352-19107462)
chr1 (16-59)||(22116814-22116857)
chr1 (16-59)||(50618813-50618856)
chr1 (77-194)||(21951900-21952017)
chr1 (18-59)||(51331908-51331949)
chr1 (70-102)||(20835231-20835263)
chr1 (15-59)||(20938478-20938522)
[»] scaffold0298 (3 HSPs)
scaffold0298 (70-237)||(11196-11363)
scaffold0298 (70-237)||(14966-15133)
scaffold0298 (70-239)||(20983-21152)
[»] scaffold0010 (4 HSPs)
scaffold0010 (71-237)||(46538-46704)
scaffold0010 (77-194)||(41515-41632)
scaffold0010 (16-59)||(3831-3874)
scaffold0010 (77-214)||(2921-3058)
[»] scaffold0011 (4 HSPs)
scaffold0011 (70-239)||(149570-149739)
scaffold0011 (70-237)||(194843-195010)
scaffold0011 (20-59)||(24879-24918)
scaffold0011 (77-237)||(25672-25832)
[»] scaffold1830 (1 HSPs)
scaffold1830 (70-186)||(1-117)
[»] scaffold0309 (2 HSPs)
scaffold0309 (70-237)||(10793-10960)
scaffold0309 (18-59)||(16560-16601)
[»] scaffold0261 (2 HSPs)
scaffold0261 (70-233)||(14340-14503)
scaffold0261 (70-233)||(22519-22682)
[»] scaffold0035 (1 HSPs)
scaffold0035 (71-186)||(3752-3867)
[»] scaffold0232 (1 HSPs)
scaffold0232 (77-239)||(823-985)
[»] scaffold0058 (1 HSPs)
scaffold0058 (71-189)||(20121-20239)
[»] scaffold0009 (1 HSPs)
scaffold0009 (77-194)||(249620-249737)
[»] scaffold0465 (1 HSPs)
scaffold0465 (70-237)||(372-540)
[»] scaffold0156 (1 HSPs)
scaffold0156 (70-186)||(28225-28341)
[»] scaffold0004 (2 HSPs)
scaffold0004 (70-194)||(323704-323828)
scaffold0004 (72-210)||(202634-202772)
[»] scaffold1646 (1 HSPs)
scaffold1646 (70-237)||(324-491)
[»] scaffold0049 (1 HSPs)
scaffold0049 (72-214)||(51025-51167)
[»] scaffold0130 (1 HSPs)
scaffold0130 (72-237)||(9947-10112)
[»] scaffold1061 (1 HSPs)
scaffold1061 (70-186)||(2588-2704)
[»] scaffold0865 (1 HSPs)
scaffold0865 (143-239)||(3409-3505)
[»] scaffold0367 (1 HSPs)
scaffold0367 (70-194)||(6420-6544)
[»] scaffold0133 (1 HSPs)
scaffold0133 (143-239)||(30422-30518)
[»] scaffold0126 (1 HSPs)
scaffold0126 (70-194)||(41917-42041)
[»] scaffold0114 (2 HSPs)
scaffold0114 (70-194)||(20900-21024)
scaffold0114 (70-194)||(45517-45641)
[»] scaffold0077 (1 HSPs)
scaffold0077 (70-186)||(20631-20747)
[»] scaffold0060 (1 HSPs)
scaffold0060 (77-237)||(43790-43950)
[»] scaffold0124 (1 HSPs)
scaffold0124 (70-237)||(13200-13367)
[»] scaffold0101 (1 HSPs)
scaffold0101 (70-189)||(4639-4758)
[»] scaffold0518 (1 HSPs)
scaffold0518 (71-237)||(11734-11900)
[»] scaffold0071 (1 HSPs)
scaffold0071 (70-228)||(48354-48512)
[»] scaffold0020 (2 HSPs)
scaffold0020 (77-171)||(100754-100848)
scaffold0020 (70-211)||(181199-181340)
[»] scaffold0203 (1 HSPs)
scaffold0203 (72-237)||(13438-13603)
[»] scaffold0239 (1 HSPs)
scaffold0239 (70-194)||(11968-12092)
[»] scaffold0213 (1 HSPs)
scaffold0213 (70-194)||(5518-5642)
[»] scaffold0585 (1 HSPs)
scaffold0585 (152-238)||(6229-6315)
[»] scaffold0742 (1 HSPs)
scaffold0742 (70-194)||(6213-6337)
[»] scaffold0120 (2 HSPs)
scaffold0120 (70-186)||(742-857)
scaffold0120 (77-237)||(13065-13225)
[»] scaffold0235 (2 HSPs)
scaffold0235 (70-237)||(10596-10763)
scaffold0235 (70-237)||(20810-20977)
[»] scaffold0190 (1 HSPs)
scaffold0190 (77-194)||(32501-32618)
[»] scaffold0056 (1 HSPs)
scaffold0056 (77-214)||(4515-4652)
[»] scaffold0046 (1 HSPs)
scaffold0046 (77-194)||(81014-81131)
[»] scaffold0012 (2 HSPs)
scaffold0012 (70-214)||(230043-230187)
scaffold0012 (70-167)||(218626-218723)
[»] scaffold1602 (1 HSPs)
scaffold1602 (70-214)||(1229-1373)
[»] scaffold0270 (4 HSPs)
scaffold0270 (16-59)||(5788-5831)
scaffold0270 (16-59)||(12918-12961)
scaffold0270 (70-214)||(4871-5015)
scaffold0270 (70-214)||(12001-12145)
[»] scaffold0089 (2 HSPs)
scaffold0089 (134-237)||(10501-10604)
scaffold0089 (77-194)||(15895-16012)
[»] scaffold0005 (2 HSPs)
scaffold0005 (70-189)||(261308-261427)
scaffold0005 (77-214)||(277992-278129)
[»] scaffold0708 (1 HSPs)
scaffold0708 (77-194)||(7327-7444)
[»] scaffold0180 (1 HSPs)
scaffold0180 (70-214)||(31915-32059)
[»] scaffold0037 (1 HSPs)
scaffold0037 (70-210)||(116071-116211)
[»] scaffold0331 (1 HSPs)
scaffold0331 (70-237)||(17116-17283)
[»] scaffold0113 (1 HSPs)
scaffold0113 (70-162)||(25079-25171)
[»] scaffold0104 (2 HSPs)
scaffold0104 (77-189)||(20401-20513)
scaffold0104 (77-189)||(23221-23333)
[»] scaffold0064 (1 HSPs)
scaffold0064 (70-214)||(39921-40065)
[»] scaffold0018 (4 HSPs)
scaffold0018 (70-237)||(11336-11503)
scaffold0018 (70-237)||(17528-17695)
scaffold0018 (15-59)||(11087-11131)
scaffold0018 (15-59)||(17279-17323)
[»] scaffold0411 (1 HSPs)
scaffold0411 (72-210)||(14245-14383)
[»] scaffold0359 (1 HSPs)
scaffold0359 (70-237)||(17681-17848)
[»] scaffold0042 (2 HSPs)
scaffold0042 (72-239)||(66407-66574)
scaffold0042 (77-214)||(38982-39119)
[»] scaffold0040 (3 HSPs)
scaffold0040 (70-237)||(15877-16044)
scaffold0040 (16-59)||(111834-111877)
scaffold0040 (70-214)||(112650-112794)
[»] scaffold0006 (2 HSPs)
scaffold0006 (70-237)||(102233-102400)
scaffold0006 (18-59)||(103152-103193)
[»] scaffold0676 (1 HSPs)
scaffold0676 (70-239)||(7014-7183)
[»] scaffold0088 (1 HSPs)
scaffold0088 (77-194)||(27940-28057)
[»] scaffold0647 (1 HSPs)
scaffold0647 (70-237)||(1908-2075)
[»] scaffold0017 (3 HSPs)
scaffold0017 (70-214)||(19229-19373)
scaffold0017 (74-239)||(57021-57186)
scaffold0017 (133-239)||(196615-196721)
[»] scaffold0431 (1 HSPs)
scaffold0431 (70-180)||(8366-8476)
[»] scaffold0084 (2 HSPs)
scaffold0084 (72-171)||(6223-6322)
scaffold0084 (15-59)||(7137-7181)
[»] scaffold0083 (2 HSPs)
scaffold0083 (70-237)||(10155-10322)
scaffold0083 (15-59)||(9380-9424)
[»] scaffold0081 (5 HSPs)
scaffold0081 (119-214)||(19651-19746)
scaffold0081 (134-214)||(35090-35170)
scaffold0081 (70-214)||(50432-50576)
scaffold0081 (15-59)||(20518-20562)
scaffold0081 (15-59)||(35942-35986)
[»] scaffold0023 (3 HSPs)
scaffold0023 (16-59)||(2851-2894)
scaffold0023 (72-211)||(3622-3761)
scaffold0023 (18-58)||(151029-151069)
[»] scaffold0501 (1 HSPs)
scaffold0501 (77-213)||(3201-3337)
[»] scaffold0405 (1 HSPs)
scaffold0405 (16-48)||(455-487)
[»] scaffold0396 (1 HSPs)
scaffold0396 (78-213)||(5039-5174)
[»] scaffold0282 (2 HSPs)
scaffold0282 (15-59)||(14825-14869)
scaffold0282 (143-237)||(15621-15715)
[»] scaffold0278 (1 HSPs)
scaffold0278 (15-59)||(367-411)
[»] scaffold1715 (1 HSPs)
scaffold1715 (125-184)||(13-72)
[»] scaffold1373 (1 HSPs)
scaffold1373 (16-59)||(1180-1223)
[»] scaffold0333 (2 HSPs)
scaffold0333 (16-59)||(17571-17614)
scaffold0333 (70-214)||(16655-16798)
[»] scaffold0293 (2 HSPs)
scaffold0293 (16-47)||(14385-14416)
scaffold0293 (70-214)||(13468-13612)
[»] scaffold0122 (1 HSPs)
scaffold0122 (16-59)||(38294-38337)
[»] scaffold0074 (2 HSPs)
scaffold0074 (77-239)||(4147-4309)
scaffold0074 (18-48)||(5031-5061)
[»] scaffold0022 (1 HSPs)
scaffold0022 (16-59)||(55672-55715)
[»] scaffold0375 (1 HSPs)
scaffold0375 (77-239)||(2951-3113)
[»] scaffold0228 (1 HSPs)
scaffold0228 (15-61)||(20154-20200)
[»] scaffold0102 (1 HSPs)
scaffold0102 (153-239)||(40781-40867)
[»] scaffold0540 (1 HSPs)
scaffold0540 (18-59)||(6677-6718)
[»] scaffold0319 (1 HSPs)
scaffold0319 (18-59)||(685-726)
[»] scaffold0093 (1 HSPs)
scaffold0093 (77-186)||(27268-27377)
[»] scaffold0080 (1 HSPs)
scaffold0080 (18-59)||(50009-50050)
[»] scaffold1710 (1 HSPs)
scaffold1710 (70-102)||(864-896)
[»] scaffold0507 (1 HSPs)
scaffold0507 (71-186)||(9971-10086)
[»] scaffold0379 (1 HSPs)
scaffold0379 (70-237)||(7030-7197)
[»] scaffold0243 (1 HSPs)
scaffold0243 (70-214)||(26106-26250)
[»] scaffold0109 (1 HSPs)
scaffold0109 (70-214)||(32735-32879)


Alignment Details
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 34645034 - 34644865
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  34645034 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttatcaggaatgcaaattctgcctctgaatctcaacaca 34644935  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  34644934 ccgtgttcatcaaccttgaaatcaccatcttcagtttgattgctatcaatcattaaatccacaaacttga 34644865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 19880131 - 19880300
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  19880131 cggatggatactcaagctactcttgtggctttcttccaaaatcaaccttttcatctcatcgttgttaggaatacaaattctgcctctgaacctcaacaca 19880230  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || ||||||||||| |||||||||| | ||||||| ||||||||| ||| ||||||||||||||||||||    
T  19880231 ccttgttcatcaactttgaaatcactatcttcagtctgattactatcaaccattaaatccacaaacttga 19880300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 18795523 - 18795692
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||||| |||||| ||||| ||||| |||||||| ||||||||||||||||||    
T  18795523 cggatggatactcaagctactcttgtgactttcttccaagatcaactttttcaactcatcattgtccggaatacaaattctacctctgaacctcaacaca 18795622  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || ||||||||||| |||||||||| | |||||| ||||||||||  || ||||||||||||||||||||    
T  18795623 ccttgttcatcaactttgaaatcactatcttcagattgattactataaaacattaaatccacaaacttga 18795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 25769024 - 25769193
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  ||||||||||||||||||||||  |||||| ||||||  | |||||||| |||||||| ||||| ||||||||||||    
T  25769024 cggatgaatacttaagctacttctgtgactttcttccaaaatcaactttttcaactcatcactatcaggaatacaaattcttcctctaaacctcaacaca 25769123  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||||| ||||| ||||||||||| ||| ||||||||||||||||||||    
T  25769124 ccctgatcatcaaccttgaagtcaccatcttcattttgattactagcaaccattaaatccacaaacttga 25769193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 21472457 - 21472603
Alignment:
Q  93 tgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatc 192  Q
    ||||||||||||| ||||||||  |||||| ||||||  | ||||||||||||||| | ||||||||||||||||| || || |||||||||||||| ||    
T  21472457 tgtgactttcttctaaaatcaactttttcaactcatcactatcaggaatgcaaattattcctctgaacctcaacacgccctgatcatcaaccttgaagtc 21472556  T
Q  193 accaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || | ||||||||||||||||| ||| ||| ||||||||||||||||    
T  21472557 actatcttcagtttgattactagcaaccatcaaatccacaaacttga 21472603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 19488720 - 19488553
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || |||||||| | ||||||||||| ||| |||||||||    
T  19488720 cggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatacgaattctgcctcggaatctcaacaca 19488621  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||| ||| |||||| ||||||||||||||||| ||| ||  || |||||||||||    
T  19488620 ccttgatcatcaacctggaagtcaccatcttcagtttgattactagcaaccaacaagtccacaaactt 19488553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 15460170 - 15460338
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||||||  | ||||| ||||||||||| ||||||||  | ||||  || || ||||| ||||| |||||||||||||| || ||||| ||||    
T  15460170 ggatgaatactcaaattgctcttatgactttcttctaaaatcaacttcttcaattcttcattgtcgggaatacaaattctgcctctaaatctcaatacac 15460269  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | ||||||||||| |||||||||||| | |||| |||||||||| ||| ||||||||||||||||||||    
T  15460270 cttgttcatcaactttgaaatcaccatcctcagcttgattactatcaaccattaaatccacaaacttga 15460338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 19435835 - 19435959
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| |||||||||    
T  19435835 cggatgaatactcaagctactcttgtgactttattctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaacaca 19435934  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || ||||| |||||||| ||||    
T  19435935 ccctgatcatccaccttgaagtcac 19435959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 5296647 - 5296487
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||||||| ||||||||| ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||||| || |    
T  5296647 atactcaagctactcttgtaactttcttctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatacaccctgat 5296548  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||||||||||| |||| | | || |||| |||||   ||| ||||||||| ||||||||    
T  5296547 catcaaccttgaagtcactatcctctgtttcattacccgcaaacattaaatcaacaaactt 5296487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 21563580 - 21563411
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||||||| || ||| ||||| |||| ||||| || ||||| ||   ||||| |||||| || |||||||| |||||||||||||| || ||||||||     
T  21563580 cggatggatgcttaagttactcctgtggctttcctctaaaattaactgtttcaactcatcattatcaggaatacaaattctgcctctaaatctcaacacg 21563481  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || |||||||||||||||||||||| | | |||| ||||||||||  || || || ||||||||||||||    
T  21563480 ccttgttcatcaaccttgaaatcactagcctcagcttgattactagtaaccaatatatccacaaacttga 21563411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 21569439 - 21569270
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||||||| || ||| ||||| |||| ||||| || ||||| ||   ||||| |||||| || |||||||| |||||||||||||| || ||||||||     
T  21569439 cggatggatgcttaagttactcctgtggctttcctctaaaattaactgtttcaactcatcattatcaggaatacaaattctgcctctaaatctcaacacg 21569340  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || |||||||||||||||||||||| | | |||| ||||||||||  || || || ||||||||||||||    
T  21569339 ccttgttcatcaaccttgaaatcactagcctcagcttgattactagtaaccaatacatccacaaacttga 21569270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 8762374 - 8762214
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||||||||| |||||||||| ||| ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||||| || |    
T  8762374 atactcaagctacttttgtgactttattctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatacaccctgat 8762275  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||||||||||| |||| | | || |||| |||||   ||| ||||||||| ||||||||    
T  8762274 catcaaccttgaagtcactatcctctgtttcattacccgcaaccattaaatcaacaaactt 8762214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 19454253 - 19454369
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||| |||||||||||||||| || ||||||||| |||||| ||| || |  |||||||| |||||||| ||||||||||||||||||    
T  19454253 cggatgaatacttaagttactcttgtgactttcctcgaaaatcaattttttcaactcgtcatcatcaggaatacaaattcttcctctgaacctcaacaca 19454352  T
Q  170 ccgtgttcatcaacctt 186  Q
    || || |||||||||||    
T  19454353 ccctgatcatcaacctt 19454369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 14379365 - 14379241
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| | |||||||||||||||||||||||| || ||||| ||  |||||| |||||| |||||| |||| |||||||| |||||||||||||| |||    
T  14379365 cggatgaacactcaagctactcttgtgactttcctctaaaattaactttttcaactcatcattgtcacgaatacaaattcttcctctgaacctcaataca 14379266  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || ||||| ||| |||| ||||    
T  14379265 ccctgatcatccaccatgaagtcac 14379241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 14380915 - 14380791
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| | |||||||||||||||||||||||| || ||||| ||  |||||| |||||| |||||| |||| |||||||| |||||||||||||| |||    
T  14380915 cggatgaacactcaagctactcttgtgactttcctctaaaattaactttttcaactcatcattgtcacgaatacaaattcttcctctgaacctcaataca 14380816  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || ||||| ||| |||| ||||    
T  14380815 ccctgatcatccaccatgaagtcac 14380791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 10468290 - 10468173
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| |||||||||||||| ||||| || |    
T  10468290 atactcaacctactcttgtgactctcttctagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcaaaacaccctgat 10468191  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||| ||||    
T  10468190 catcaactttgaagtcac 10468173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 18197173 - 18197006
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| |||| ||||||||||||| ||| ||||| |||||||| ||||  || ||||||||    
T  18197173 cggatgaatactcaagctacttctgtgactctcttcaagaatca-tcttcttcatctcatcgtcgtctggaatacaaattctacctcgaaatctcaacac 18197075  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||| || ||||| ||||| || |||| | | | ||| ||||||||| ||| ||  || |||||||||||    
T  18197074 accttgatcatcgaccttaaagtcactatccttagtgtgattactagcaaccaacaagtccacaaactt 18197006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 28282261 - 28282137
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  28282261 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 28282162  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  28282161 ccctgatcatcaaccttgaagtcac 28282137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 23079302 - 23079467
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||||||||||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | |||||||||  ||||||| |||| ||| ||||||||    
T  23079302 cggatggatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtcaggaatagaaattctccctcggaatctcaacac 23079400  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaac 235  Q
     || || ||||| |  || ||||||| | ||||||| ||||||||| ||| ||  ||||| ||||||    
T  23079401 tccttgatcatcgattttaaaatcactatcttcagtctgattactagcaaccaacaaatctacaaac 23079467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 24365252 - 24365369
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| ||||| |||||||| || || | ||||||  | |||| ||| || || |||||||| |||| ||| ||||||||||||| |||||| || |    
T  24365252 atactcaacctactattgtgactctcctcaagaatcaacttcttcaactcttcattatcaggaatacaaactctacctctgaacctcagcacaccctgat 24365351  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  24365352 catcaaccttaaaatcac 24365369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 18966740 - 18966573
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttt-tcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| ||||  |||||||||| ||||||||||| |||||||| ||||  || | ||||||    
T  18966740 cggatgaatactcaagctacttctgtgactctcttcaagaatca-tcttcctcatctcatcattgtcaggaatacaaattctacctcgaaatcacaacac 18966642  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     || || ||||||||||| || |||| | ||| ||| ||||| | | |||| | |||||| ||||||||    
T  18966641 tccctgatcatcaaccttaaagtcactatctttagtctgatttccaccaataaataaatctacaaactt 18966573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 19865520 - 19865664
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||| | ||||| ||||| | ||||| | | |||||||| || |  |||||||| |||||||   |||  || |||||||||    
T  19865520 cggatgaatactcaagctactcctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcgaactcgaaatctcaacaca 19865619  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || ||||| ||||| || |||||| ||||||| |||||||||    
T  19865620 ccatggtcatcgaccttaaagtcaccatcttcagtctgattacta 19865664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 25609309 - 25609140
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| |||| |||||||| || | ||| ||||| ||||| || ||||  |||||||| ||    
T  25609309 cggatgaatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcttcatcgtctggaatacaaatcctacctcgaaacctcaatac 25609211  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||| || ||||| | ||| ||||||||  ||||||| ||||||||| ||| ||  || |||||||||||||    
T  25609210 accttggtcatcgatcttaaaatcaccgtcttcagtctgattactagcaaccaacaagtccacaaacttga 25609140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 22434702 - 22434871
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||| || || |   ||||||| |||||||   ||| ||| |||||||||    
T  22434702 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatttcttcatcaacaggaatacaaattcgatctcggaatctcaacaca 22434801  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||| ||||| |||||||| |||||| ||||||| | ||||||| ||| ||  || || ||||||||||    
T  22434802 ccgtggtcatcgaccttgaagtcaccatcttcagtctaattactagcaaccaacaagtctacaaacttga 22434871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 22443100 - 22443269
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||| || || |   ||||||| |||||||   ||| ||| |||||||||    
T  22443100 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatttcttcatcaacaggaatacaaattcgatctcggaatctcaacaca 22443199  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||| ||||| |||||||| |||||| ||||||| | ||||||| ||| ||  || || ||||||||||    
T  22443200 ccgtggtcatcgaccttgaagtcaccatcttcagtctaattactagcaaccaacaagtctacaaacttga 22443269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 15896928 - 15897067
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||||||||||||| ||||  ||||||| ||||  | ||||| |||| ||||||||||| | ||||||||| | |||||||||||  || | ||||||     
T  15896928 ggatggatactcaagatacttgtgtgactctctttaagaatca-tcttcttcatctcatcatcgtcaggaatacgaattctgcctcgtaatcgcaacact 15897026  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgatt 210  Q
    || || ||||||||||| || |||| | ||||||| |||||    
T  15897027 ccctgatcatcaaccttaaagtcactatcttcagtctgatt 15897067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 20636749 - 20636582
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||| ||||  | ||||| ||||| | ||||| | | ||||||||||| | ||| |||||  |||| || ||||  ||||||||||||    
T  20636749 cggatgaatactcaagttacttctatgactctcttcaagaatcattttcttcatctcatcatcgtctggaataaaaatcctacctcgaaacctcaacaca 20636650  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||| |  || |||||||  |||||||| ||||||||| ||| ||  || |||||||||||    
T  20636649 ccttgatcatcgattttaaaatcactgccttcagtctgattactagcaaccaacaagtccacaaactt 20636582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 5838660 - 5838498
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| || || | ||||| | | |||||||| || |||||||| || ||||||   |||  ||| || |||||||| || |    
T  5838660 atactcaagctacttctatgactctcctcgagaatcattttcttcatctcttcattgtcagggatacaaatttgaccttggaatcttaacacaccatggt 5838561  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| ||||| ||||||||| ||||||| ||||||||| | |  |  ||||||||||||||||    
T  5838560 catcgaccttaaaatcaccatcttcagtctgattactagcgactaacaaatccacaaacttga 5838498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 16927081 - 16926919
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  ||||||| ||||| | ||||| | |  |||||||  | | ||||||||||||||| |  |||| ||| ||||||||||| || |    
T  16927081 atactcaagctacttctgtgactctcttcaagaatcattttcctcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacacaccatggt 16926982  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| || || || |||||| ||||||| | ||||||| ||| ||  || || ||||||||||    
T  16926981 catcgactttaaagtcaccatcttcagtctaattactagcaaccaacaagtctacaaacttga 16926919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 16962893 - 16962724
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | |  |||||||  | | ||||||||||||||| |  |||| ||| ||||||||     
T  16962893 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcctcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacacg 16962794  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || ||||| || || || |||||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  16962793 ccatggtcatcgactttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaaacttga 16962724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 20634469 - 20634428
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  20634469 tcaactttagacggatctactgcaataccactaccagaaata 20634428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 23080218 - 23080251
Alignment:
Q  15 acatcaactttagatggatctactgcaataccac 48  Q
    |||||||||||||| |||||||||||||||||||    
T  23080218 acatcaactttagagggatctactgcaataccac 23080251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 25608390 - 25608349
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  25608390 tcaactttagacggatctactgcaataccactaccagaaata 25608349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 171
Target Start/End: Complemental strand, 27566428 - 27566327
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||| || ||||| ||||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  27566428 cggatgaatactcaagctacttttatgactctcttcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 27566329  T
Q  170 cc 171  Q
    ||    
T  27566328 cc 27566327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 18965827 - 18965795
Alignment:
Q  15 acatcaactttagatggatctactgcaatacca 47  Q
    ||||||||||||||||||||||||| |||||||    
T  18965827 acatcaactttagatggatctactgtaatacca 18965795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 23086276 - 23086244
Alignment:
Q  16 catcaactttagatggatctactgcaataccac 48  Q
    |||||||||||||||||||||| ||||||||||    
T  23086276 catcaactttagatggatctaccgcaataccac 23086244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 32983 - 32814
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32983 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacttcaacaca 32884  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || ||||||||||| |||||||||| | | |||| ||||||||||  ||  |||||||||||||||||||    
T  32883 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 32814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 56206 - 56082
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| ||||| |||    
T  56206 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaataca 56107  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || ||||| |||||||| ||||    
T  56106 ccctgatcatccaccttgaagtcac 56082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 2e-60; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 19613634 - 19613803
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19613634 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacttcaacaca 19613733  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || ||||||||||| |||||||||| | | |||| ||||||||||  ||  |||||||||||||||||||    
T  19613734 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 19613803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 19148171 - 19148339
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| |||||| |  ||||||||||||| ||||||||  ||||||  ||||| || ||||||||||||||||| |||||||||||||||| ||    
T  19148171 ggatgaatacttaagctatttatgtgactttcttctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacatac 19148270  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || ||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  19148271 cctgatcatcaaccttgaaatcaccatcttcagtttgattactagcaaccattaaacccacaaacttga 19148339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 20747570 - 20747738
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| |||||| |  ||||||||||||| ||||||||  ||||||  ||||| || ||||||||||||||||| |||||||||||||||| ||    
T  20747570 ggatgaatacttaagctatttatgtgactttcttctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacatac 20747669  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || ||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  20747670 cctgatcatcaaccttgaaatcaccatcttcagtttgattactagcaaccattaaacccacaaacttga 20747738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 11387718 - 11387549
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||| ||| ||||| |||| ||||| || ||||| ||  |||||| |||||| || |||||||| ||||||||||||||||||||||||||     
T  11387718 cggatggatacttaagttactcctgtggctttcctctaaaattaactttttcaactcatcattatcaggaatacaaattctgcctctgaacctcaacacg 11387619  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || |||||||||||||||||||||| | | |||| ||||||||||  || ||||||||||||||||||||    
T  11387618 ccttgttcatcaaccttgaaatcactatcctcagcttgattactagtaaccattaaatccacaaacttga 11387549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 15101893 - 15101724
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  |||||||| |||||||| |||||||| ||||||||||||| ||||    
T  15101893 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcgttatcaggaatacaaattcttcctctgaacctcagcaca 15101794  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||| | ||||||| | ||||| ||||| ||| ||||| | ||||||||    
T  15101793 ccctgatcatcaaccttgaagtcactatcttcagtgtcattaccaacaaccatcaaatcaataaacttga 15101724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 16949755 - 16949595
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| |||| |||||| |||||||| ||||| || ||||| ||||| || |    
T  16949755 atactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgttaggaatacaaattcttcctctaaatctcaaaacaccctgat 16949656  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||||||||||| |||| | | ||||| | ||||| || |||||||||||| ||||||||    
T  16949655 catcaaccttgaagtcactatcctcagtgtcattaccaataatcattaaatcaacaaactt 16949595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 16071584 - 16071416
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  | || ||||| || |||||||| ||||| |  ||||| || ||| |||| |||||||| ||||||||||||||||||    
T  16071584 cggatgaatacttaagctacttctatggctttcctctaaaatcaa-ctttttaaatcatcattatcatgaatacaaattcttcctctgaacctcaacaca 16071486  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || ||||||||||||||||||||| |||||| |||||||||| ||| ||||||||| ||||||||||    
T  16071485 ccctgatcatcaaccttgaaatcaccatcttcagcttgattactagcaaccattaaatcaacaaacttga 16071416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 12206090 - 12205923
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  ||||||||||||| |||||||| ||||||| |||||| || |||||||| |||||||| |||| ||| |||||||||    
T  12206090 cggatgaatacttaagctacttctgtgactttcttctaaaatcaaccttttcaactcatcattatcaggaatacaaattcttcctcggaatctcaacaca 12205991  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| |||| | |||||||||| || ||| | | ||  ||||||||||||||    
T  12205990 ccttgatcatcaaccttgaagtcactatcttcagtttggttgctagccaccaacaaatccacaaactt 12205923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 14285665 - 14285542
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| |||||||||||||||||||||||||| || ||||||||  |||||| |||||| ||||||||||| ||||| || |||||||| ||||||||||    
T  14285665 ggatgaatactcaagctactcttgtgactttcctctaaaatcaactttttcaactcatcattgtcaggaatacaaatcctccctctgaatctcaacacac 14285566  T
Q  171 cgtgttcatcaaccttgaaatcac 194  Q
    | || |||||||||||||| ||||    
T  14285565 cctgatcatcaaccttgaagtcac 14285542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 697 - 573
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||| | | |||||||||||  |||    
T  697 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaatttttcttctgaacctcataaca 598  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  597 ccctgatcatcaaccttgaagtcac 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 14263511 - 14263365
Alignment:
Q  93 tgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatc 192  Q
    |||||||||| || ||||||||  ||||||  |||||  | ||||||||||||||||| |||||||||||||||||||| || |||||||||||||| ||    
T  14263511 tgtgactttcctctaaaatcaactttttcaaatcatcactatcaggaatgcaaattcttcctctgaacctcaacacaccctgatcatcaaccttgaagtc 14263412  T
Q  193 accaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || | ||||||||| |||||||  || ||||||||| || |||||||    
T  14263411 actatcttcagtttcattactagtaaccattaaatcaacgaacttga 14263365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 204
Target Start/End: Original strand, 14434650 - 14434784
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| |||||||||    
T  14434650 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaacaca 14434749  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagt 204  Q
    || || |||||||||||||| |||| | |||||||    
T  14434750 ccctgatcatcaaccttgaagtcactatcttcagt 14434784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 12456668 - 12456785
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| ||||||||||| |  ||||| || |    
T  12456668 atactcaaactactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaaccttagaacaccctgat 12456767  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||||||||| ||||    
T  12456768 catcaaccttgaagtcac 12456785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 13666496 - 13666612
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||  ||||| || |||||||| |||||||| ||||||||||||||||||    
T  13666496 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacaca 13666595  T
Q  170 ccgtgttcatcaacctt 186  Q
     | || |||||||||||    
T  13666596 tcctgatcatcaacctt 13666612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 15341390 - 15341514
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||| ||||||| ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||     
T  15341390 cggatgaatactcaagctactcttgtgaatttcttctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatact 15341489  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  15341490 ccctgatcatcaaccttgaagtcac 15341514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 18053243 - 18053119
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || || || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  18053243 cggatgaatgcttaagctactcttatgactttcctctaagattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 18053144  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || ||||||||||||||||| ||||    
T  18053143 ccctgttcatcaaccttgaagtcac 18053119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 12457606 - 12457723
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||||||||||||||| |||| ||| ||||| ||||||| |||||| || |    
T  12457606 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcgttgtcaggaatacaaactcttcctctaaacctcagcacaccttggt 12457705  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  12457706 catcaaccttaaaatcac 12457723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 15153969 - 15153825
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||||||| | ||||| ||||| | ||||| | | ||||||||||| | ||| ||||| ||||| || ||||  ||||||||||||    
T  15153969 cggatggatactcaagctactcctatgactctcttcaagaatcattttcttcatctcatcatcgtctggaatacaaatcctacctcgaaacctcaacaca 15153870  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || ||||| |  || ||||||| | ||||||| |||||||||    
T  15153869 ccttgatcatcgattttaaaatcactatcttcagtctgattacta 15153825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 15625510 - 15625595
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctc 155  Q
    |||||| ||||||||||||||  ||||||||||||| | |||| ||||| ||||||||||| ||||||||||| |||||||||||||    
T  15625510 cggatgaatactcaagctacttctgtgactttcttcaagaatc-atcttcttcatctcatcattgtcaggaatacaaattctgcctc 15625595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 11305546 - 11305429
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  11305546 atactcaaactactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagtacaccttgat 11305447  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  11305446 catcaactttgaaatcac 11305429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 13022323 - 13022440
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  13022323 atactcaacctactcttgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagaacaccctgat 13022422  T
Q  177 catcaaccttgaaatcac 194  Q
    ||| ||||||||| ||||    
T  13022423 cataaaccttgaagtcac 13022440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 15204577 - 15204721
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| |||||||||||||| |||||||| ||||| | ||||| |||| || ||||| || | ||||||||| ||||||||||||| ||| |||||||     
T  15204577 cggatgaatactcaagctacttttgtgactctcttcaagaatca-tcttctttatctcttcatcgtcaggaatacaaattctgcctcggaatctcaacat 15204675  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
     || || ||||| |||||||| |||| | ||||||| | |||||||    
T  15204676 tccctgatcatcgaccttgaagtcactatcttcagtctaattacta 15204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 49153267 - 49153384
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  49153267 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagaacaccctgat 49153366  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  49153367 catcaactttgaaatcac 49153384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 321348 - 321205
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||||||||||||||||||  | | ||||||||| | ||||| | | ||||||||||| | ||| ||||| ||||||||  ||| ||| ||||||||||    
T  321348 ggatggatactcaagctacttctatcactttcttcaagaatcattttcttcatctcatcatcgtctggaatacaaattctatctcggaatctcaacacac 321249  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    | || |||||||  || |||||||   ||||||| |||||||||    
T  321248 cttgatcatcaattttaaaatcactgtcttcagtctgattacta 321205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 11771546 - 11771386
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgt 175  Q
    ||||||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | ||||||||| |||||||||||||  || |||| ||| || ||     
T  11771546 atactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtcaggaatacaaattctgcctcgaaatctcaccacgccttga 11771448  T
Q  176 tcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||| |  || ||||||| | ||||||| ||||||||| ||||||  || |||||||||||    
T  11771447 tcatcgattttaaaatcactatcttcagtctgattactagcaatcaacaagtccacaaactt 11771386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 26117888 - 26117771
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || || |||||||| |||| | | ||||||||||||| |||||| || |    
T  26117888 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattatcaggaatacaaactttacctctgaacctcagcacaccctgat 26117789  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  26117788 catcaaccttaaaatcac 26117771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 11770636 - 11770593
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  11770636 catcaactttagatggatctactgcaataccactaccagaaata 11770593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 14040653 - 14040820
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||| |||||  | ||||| ||||| | | ||| | | |||||||||||   ||| ||||| |||||||| |||| ||| |||||||||    
T  14040653 cggatgaatactcaaactacttctatgactctcttcaagattcattttcttcatctcatcagcgtctggaatacaaattctacctcggaatctcaacaca 14040752  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||| |  || ||||||| | ||||||| ||||||||||||| ||  ||||| ||||||||    
T  14040753 ccttgatcatcgattttaaaatcactatcttcagtctgattactaacaaccaacaaatctacaaactt 14040820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 14350683 - 14350850
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||| |||||  | ||||| ||||| | | ||| | | |||||||||||   ||| ||||| |||||||| |||| ||| |||||||||    
T  14350683 cggatgaatactcaaactacttctatgactctcttcaagattcattttcttcatctcatcagcgtctggaatacaaattctacctcggaatctcaacaca 14350782  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||| |  || ||||||| | ||||||| ||||||||||||| ||  ||||| ||||||||    
T  14350783 ccttgatcatcgattttaaaatcactatcttcagtctgattactaacaaccaacaaatctacaaactt 14350850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 13967951 - 13967834
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  |||||  ||||| |||| |||| ||| ||||||||||||| |||||| || |    
T  13967951 atactcaacctactcttgtgactctcctcgagaatcaaattcttcaaatcatcactgtcaagaatacaaactcttcctctgaacctcagcacaccctgat 13967852  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| || |||||||    
T  13967851 catcaactttaaaatcac 13967834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 14955519 - 14955622
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgt 175  Q
    ||||||||||||||| ||||||| ||||| | ||||| |||| || ||||| || ||||| ||||| |||||||| |||| ||| ||||||||||| ||     
T  14955519 atactcaagctactcctgtgactctcttcaagaatca-tcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaacacaccttga 14955617  T
Q  176 tcatc 180  Q
    |||||    
T  14955618 tcatc 14955622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 180
Target Start/End: Original strand, 18178707 - 18178810
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgt 175  Q
    ||||||||||||||  | ||||||||||| | ||||| |||| || ||||| || ||||| |||||||||||||| |||| ||| ||||||||||| ||     
T  18178707 atactcaagctacttctatgactttcttcaagaatca-tcttcttaatctcttcattgtctggaatgcaaattcttcctcggaatctcaacacaccttga 18178805  T
Q  176 tcatc 180  Q
    |||||    
T  18178806 tcatc 18178810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 14262617 - 14262574
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||    
T  14262617 catcaacttttgatggatcaactgcaataccactactagaaata 14262574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 23505160 - 23505041
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| || | ||||    
T  23505160 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatcttagcaca 23505061  T
Q  170 ccgtgttcatcaaccttgaa 189  Q
    || || ||||||||||||||    
T  23505060 ccctgatcatcaaccttgaa 23505041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Original strand, 14130832 - 14130902
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaa 140  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||    
T  14130832 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaa 14130902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 14041570 - 14041602
Alignment:
Q  16 catcaactttagatggatctactgcaataccac 48  Q
    ||||||||||||| |||||||||||||||||||    
T  14041570 catcaactttagagggatctactgcaataccac 14041602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 14351600 - 14351632
Alignment:
Q  16 catcaactttagatggatctactgcaataccac 48  Q
    ||||||||||||| |||||||||||||||||||    
T  14351600 catcaactttagagggatctactgcaataccac 14351632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 2e-60; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 27364922 - 27364753
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27364922 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacttcaacaca 27364823  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || ||||||||||| |||||||||| | | |||| ||||||||||  ||  |||||||||||||||||||    
T  27364822 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 27364753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 23277376 - 23277543
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  ||||| || |||||||| |||||||| ||||||||||||||||||    
T  23277376 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacaca 23277475  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||||||||||||||||| | ||||||||| ||||| ||||| ||| ||||| || |||||    
T  23277476 ccctgatcatcaaccttgaaatcactatcttcagtttcattaccaacaaccatcaaatcaacgaactt 23277543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 23099813 - 23099692
Alignment:
Q  118 tttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaaca 217  Q
    ||||| |||||| || |||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| | | |||| ||||||||||  |    
T  23099813 tttcaactcatcattatcaggaatacaaattctgcctctgaacctcaacacgccttgttcatcaaccttgaaatcactagcctcagcttgattactagta 23099714  T
Q  218 atcattaaatccacaaacttga 239  Q
    | || |||||||||||||||||    
T  23099713 accaataaatccacaaacttga 23099692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 19651895 - 19651771
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||||  |||||| |||||| |||||||||||||||||||| |||||||| ||||| |||    
T  19651895 cggatgaatattcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatgcaaattcttcctctgaatctcaataca 19651796  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    ||  | ||||| |||||||| ||||    
T  19651795 ccccgatcatccaccttgaagtcac 19651771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 23294535 - 23294702
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||| |||||||||||||||||||||| || | ||| ||  ||||||  | ||| |  ||||||||||||||||| |||||||| |||||||||    
T  23294535 cggatgaatattcaagctactcttgtgactttcctctagaattaactttttcaaattatcatcatcaggaatgcaaattcttcctctgaatctcaacaca 23294634  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| |||| | | |||| || ||||| | ||| ||||||||||||||||||    
T  23294635 ccctgatcatcaaccttgaagtcactatcctcagcttcattaccagcaaccattaaatccacaaactt 23294702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 23111349 - 23111503
Alignment:
Q  83 aagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaa 182  Q
    ||||||||  |||||||||| || ||||||||  |||||| ||||||  ||||| ||||| |||||||||||| ||| ||||||| ||| || |||||||    
T  23111349 aagctacttatgtgactttcctctaaaatcaactttttcaactcatcactgtcaagaatgaaaattctgcctcagaatctcaacataccctgatcatcaa 23111448  T
Q  183 ccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||||| |||||| ||  ||||||||||||| ||| ||  ||||||||||||||    
T  23111449 ccttgaagtcaccatctctagtttgattactagcaaccaacaaatccacaaactt 23111503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 20828866 - 20828983
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  20828866 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 20828965  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  20828966 catcaactttgaaatcac 20828983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 20833592 - 20833709
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  20833592 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 20833691  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  20833692 catcaactttgaaatcac 20833709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 31831265 - 31831382
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | || | ||| || ||||||||||| |||| ||| |||||||||||||||||||| || |    
T  31831265 atactcaacctactcttgtgactctcctcaagaatcaacttctttaactcctcattgtcaggaatacaaactctacctctgaacctcaacacaccctgat 31831364  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  31831365 catcaactttgaaatcac 31831382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 21325102 - 21324940
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| |||||||  |||| ||| ||||||||||| || |    
T  21325102 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcgacctcggaatctcaacacaccatggt 21325003  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| ||||| || |||||| ||||||| ||||||||| ||||||  || || ||||||||||    
T  21325002 catcgaccttaaagtcaccatcttcagtctgattactagcaatcaacaagtctacaaacttga 21324940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 24676089 - 24676258
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||| ||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| ||||||| ||||| ||| |||||||||    
T  24676089 cggatgaatactcaggctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcggcctcggaatctcaacaca 24676188  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || ||||| ||||| || |||||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  24676189 ccatggtcatcgaccttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaaacttga 24676258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 27210015 - 27209846
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||| | ||||| ||||||||||| || |||||  | ||||  || |  ||||||||||| || ||| ||||||| || |||||||||    
T  27210015 cggatgaatactcaagttgctcttatgactttcttctaatatcaacttcttcaattctttattgtcaggaatacagattttgcctctaaatctcaacaca 27209916  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || ||||||| ||||||||||| |   ||||  |||||||||  || ||| ||||||||||||||||    
T  27209915 ccttgctcatcaatcttgaaatcactattctcagcctgattactagtaaccataaaatccacaaacttga 27209846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 24819529 - 24819362
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||||||||||||||||||  ||||||| ||||  | | ||| |||| ||||||||||| | ||| ||||| |||||||| |||| ||| ||||||||    
T  24819529 cggatggatactcaagctacttctgtgactctctttaagagtca-tcttcttcatctcatcatcgtctggaatacaaattctacctcagaatctcaacac 24819431  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     || || ||||| || ||||| |||| | |||||||  |||||||| ||| ||  ||||||||||||||    
T  24819430 tccttgatcatcgactttgaagtcactatcttcagtcggattactagcaaccaacaaatccacaaactt 24819362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 27788341 - 27788465
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  27788341 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 27788440  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  27788441 ccctgatcatcaaccttgaagtcac 27788465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 24949191 - 24949314
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac-ac 170  Q
    |||| ||||| |||||||||||||||||||| || ||||||||  ||||||   |||| |  | ||||||||||||||| |||||||| |||| ||| ||    
T  24949191 gatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatgaggaatgcaaattcttcctctgaatctcatcacaac 24949290  T
Q  171 cgtgttcatcaaccttgaaatcac 194  Q
    | || |||||||||||||| ||||    
T  24949291 catgatcatcaaccttgaagtcac 24949314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 21890559 - 21890417
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||||| |||  |||| ||||| || ||||  ||||||||||||||    
T  21890559 gatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcgtcgtctagaatacaaatcctacctcgaaacctcaacacacc 21890460  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
     || ||||| |  || |||||||| |||||||| |||||||||    
T  21890459 ttgatcatcgattttaaaatcacctccttcagtctgattacta 21890417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 1064358 - 1064475
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || |||| |||||| |||| ||| |||||||||||||  ||||| || |    
T  1064358 atactcaaactactcttgtgactctcctcaagaatcaacttcttcaactcttcattgttaggaatacaaactctacctctgaacctcagtacaccctgat 1064457  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  1064458 catcaactttgaaatcac 1064475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 24876592 - 24876482
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||| ||||||| ||||| | |||| ||||| || ||||| || ||||| ||||| |||||||| |||| ||| ||||||||    
T  24876592 cggatgaatactcaagctactcctgtgactctcttcaagaatc-atcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaacac 24876494  T
Q  169 accgtgttcatc 180  Q
    ||| || |||||    
T  24876493 accttgatcatc 24876482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 22756301 - 22756139
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||| | | | |||||||| || |  |||||||| |||||||  |||| ||| ||||||||||| || |    
T  22756301 atactcaagctacttctatgactctcttcaagaattattttcttcatctcttcatcatcaggaatacaaattcgacctcggaatctcaacacaccatggt 22756202  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| ||||| || |||||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  22756201 catcgaccttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaaacttga 22756139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 24707261 - 24707177
Alignment:
Q  134 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaa 218  Q
    |||||||| |||||||  |||| ||| ||||||||||| || ||||| || || || |||||| ||||||| |||||||||||||    
T  24707261 tcaggaatacaaattcgacctcggaatctcaacacaccatggtcatcgactttaaagtcaccatcttcagtctgattactaacaa 24707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 23073380 - 23073423
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||| ||||||||||||||||||| || |||||||    
T  23073380 catcaactttagacggatctactgcaataccactaccagaaata 23073423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 41607309 - 41607268
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||| |||||||||||| |||||||||||    
T  41607309 tcaactttagacggatccactgcaataccatcactagaaata 41607268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 21144884 - 21144717
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| |||| || ||||| || ||||| ||||| |||||||| |||| ||| ||||||||    
T  21144884 cggatgaatactcaagctacttctatgactctcttcaagaatca-tcttcttaatctcctcattgtctggaatacaaattctccctcggaatctcaacac 21144786  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||| || ||||| |  || |||||||   ||||||| ||||  ||| ||| || ||| |||||||||||    
T  21144785 accttgatcatcgattttaaaatcactgtcttcagtctgatctctagcaaccaataagtccacaaactt 21144717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 24819157 - 24819113
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||| || ||||||| || |||||||    
T  24819157 acatcaactttagatggatctaccgcgataccactaccagaaata 24819113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 113559 - 113728
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||| ||| |||||||||    
T  113559 cggatggatactcaagctattcttgtgactttcttccaaaatcagccttttcatctcatcgttgtcaagaatacaaattctgcctccgaatctcaacaca 113658  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||||||||||||||||| |||||| | |||||||||||||||||  || |||||||||||||| |||||    
T  113659 ccgtgttcatcaaccttgcaatcactatcttcagtttgattactattaaccattaaatccacaagcttga 113728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 95308 - 95139
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||  | ||||| ||||||||||| ||||| ||  | || |  || || ||||| ||||  |||||||| ||||| || ||||| |||    
T  95308 cggatgaatactcaaattgctcttatgactttcttctaaaattaacttctttaattcttcattgtcgggaacacaaattctacctctaaatctcaataca 95209  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||| |||||||||||| |||||| |||||||||| ||| ||||||||||||||||||||    
T  95208 ccttgctcatcaactttgaaatcaccatcttcagcttgattactatcaaccattaaatccacaaacttga 95139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 21680263 - 21680094
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21680263 cggatggatactcaagctgctcttgtgactttcttccaaaatcaacctttttatctcatcgttgtcaggaatgcaaattctgcctctgaacttcaacaca 21680164  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || ||||||||||| |||||||||| | | |||| ||||||||||  ||  |||||||||||||||||||    
T  21680163 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 21680094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 21890244 - 21890075
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||| ||||| |||||||||||| ||||  |||||| ||||||  | ||||||||||||||||| ||||||||||||||||||    
T  21890244 cggatgaatactaaagctacttttgtggctttcttccaaactcaactttttcaactcatcactatcaggaatgcaaattcttcctctgaacctcaacaca 21890145  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || ||| |||||||||| |||| |  || ||||||||||||| ||| ||||||||| ||||||||||    
T  21890144 ccctgatcaccaaccttgaagtcactatatttagtttgattactagcaaccattaaatcgacaaacttga 21890075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 21496957 - 21497100
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  ||||||  ||||| || | ||||||||||||||| |||||||||||||||||||    
T  21496957 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaaatcatccttattaggaatgcaaattcttcctctgaacctcaacacac 21497056  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    | || |||||||||||||| |||||| ||||||||| |||||||    
T  21497057 cctgatcatcaaccttgaagtcaccatcttcagtttcattacta 21497100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 24619780 - 24619613
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||||||||  |||    
T  24619780 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaacctcagaaca 24619681  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || ||  |||||||||||||||| | | | ||||| | ||||| | ||| ||| ||||| ||||||||    
T  24619680 ccctgaacatcaaccttgaaatcgctatcctcagtgtcattaccagcaaccatcaaatcaacaaactt 24619613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 24716011 - 24715844
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||||||||  |||    
T  24716011 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaacctcagaaca 24715912  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || ||  |||||||||||||||| | | | ||||| | ||||| | ||| ||| ||||| ||||||||    
T  24715911 ccctgaacatcaaccttgaaatcgctatcctcagtgtcattaccagcaaccatcaaatcaacaaactt 24715844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 24749039 - 24748872
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||||||||  |||    
T  24749039 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaacctcagaaca 24748940  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || ||  |||||||||||||||| | | | ||||| | ||||| | ||| ||| ||||| ||||||||    
T  24748939 ccctgaacatcaaccttgaaatcgctatcctcagtgtcattaccagcaaccatcaaatcaacaaactt 24748872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 21831246 - 21831102
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| || ||||| |||||||||||||| ||||||||  |||||| |||||| || ||||| || ||||||||||||| ||| |||||||||    
T  21831246 cggatgaatacttaaactacttttgtgactttcttctaaaatcaactttttcaactcatcattatcagggatacaaattctgcctcagaatctcaacaca 21831147  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || |||||||||||||| |||||| ||| |||||||||||||    
T  21831146 ccttgatcatcaaccttgaagtcaccatctttagtttgattacta 21831102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 22462835 - 22463001
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||| | ||||| ||||||||||||||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  22462835 cggatgaatactcaagttgctcttatgactttcttccaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacaca 22462934  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || |||| ||||||||||||||||| |   || | |||||||| | ||| ||||||||||||||||||    
T  22462935 ccttgtt-atcaaccttgaaatcactattctctgcttgattaccagcaaccattaaatccacaaactt 22463001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 20774649 - 20774809
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||| | ||||| |||| |||||| ||||||||  | ||||  || || |||||||| || |||||||||||||| || ||||||||||| || |    
T  20774649 atactcaagttgctcttatgaccttcttctaaaatcaacttcttcaattcctcattgtcagggatacaaattctgcctctaaatctcaacacaccttgct 20774748  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||||||||||||||||   | || | ||||||||| |||| ||||||||||||||||||    
T  20774749 catcaaccttgaaatcactctcctcggcttgattactcacaaccattaaatccacaaactt 20774809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 20822336 - 20822480
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||  ||||||| ||||||||||| ||||||||  | ||||  || || ||||| ||||  |||||||||||||| || ||||| |||    
T  20822336 cggatgaatactcaaattactcttatgactttcttctaaaatcaacttcttcaattcttcattgtcgggaacacaaattctgcctctaaatctcaataca 20822435  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || ||||||||||| |||||||||||| |||||| ||||||||||    
T  20822436 ccttgttcatcaactttgaaatcaccatcttcagcttgattacta 20822480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 21563457 - 21563291
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||  || | |||||| |||||| ||  || ||| ||||||||||    
T  21563457 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcataattataaggaatacaaattatgtgtcggaatctcaacacac 21563358  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
      || |||||||||||||| |||||| ||||||||||||||||| ||| ||  || |||||||||||    
T  21563357 gttgatcatcaaccttgaagtcaccatcttcagtttgattactagcaaccaacaagtccacaaactt 21563291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 22235403 - 22235238
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| |||||||||||||||||||| || ||||| ||  |||||| ||| || || ||| |||| |||||||| |||||||||||||||||| |    
T  22235403 gatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaactcttcattatcatgaatacaaattcttcctctgaacctcaacacatc 22235304  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     || ||||| ||||| || |||| | | |||| || ||||| ||||| ||| ||||| ||||||||    
T  22235303 ctgatcatcgaccttaaagtcactatcctcagcttcattaccaacaaccatcaaatcaacaaactt 22235238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 24797875 - 24797758
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || |||||||||||||||| ||| |||||||||||||| ||||| || |    
T  24797875 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatgcaaactctacctctgaacctcaaaacaccttgat 24797776  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  24797775 catcaactttgaaatcac 24797758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 37542859 - 37542742
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||| | |||| ||| |||||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  37542859 atactcaacctactcttgtgactctcctcaagaatcaatttcttcaactcttcgttgtcaggaatacaaactctacctctgaacctcagtacaccctgat 37542760  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  37542759 catcaactttgaaatcac 37542742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 17268819 - 17268695
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || ||||||||||||||||||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  17268819 cggatgaatgctcaagctactcttgtgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 17268720  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  17268719 ccctgatcatcaaccttgaagtcac 17268695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 20343172 - 20343289
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  20343172 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgat 20343271  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  20343272 catcaaccttaaaatcac 20343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 26738210 - 26738045
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| | ||||||||| |||||||| ||||  || |||||| ||||    
T  26738210 gatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcgtcaggaatacaaattcttcctcgaaatctcaacgcacc 26738111  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     || ||||| |  || ||||||||| ||||||| ||||||||| ||||||  || |||||||||||    
T  26738110 atgatcatcgattttaaaatcaccatcttcagtctgattactagcaatcaacaagtccacaaactt 26738045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 28894420 - 28894303
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||| | ||||| |||| |||||| ||||||||  | ||||  || || |||||||| || |||||||||||||| || ||||||||||| || |    
T  28894420 atactcaagttgctcttatgaccttcttctaaaatcaacttcttcagttcctcattgtcagggatacaaattctgcctctaaatctcaacacaccttgct 28894321  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||||||||||||||    
T  28894320 catcaaccttgaaatcac 28894303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 28915891 - 28915774
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||| | ||||| |||| |||||| ||||||||  | ||||  || || |||||||| || |||||||||||||| || ||||||||||| || |    
T  28915891 atactcaagttgctcttatgaccttcttctaaaatcaacttcttcagttcctcattgtcagggatacaaattctgcctctaaatctcaacacaccttgct 28915792  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||||||||||||||    
T  28915791 catcaaccttgaaatcac 28915774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 28923246 - 28923129
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||| | ||||| |||| |||||| ||||||||  | ||||  || || |||||||| || |||||||||||||| || ||||||||||| || |    
T  28923246 atactcaagttgctcttatgaccttcttctaaaatcaacttcttcagttcctcattgtcagggatacaaattctgcctctaaatctcaacacaccttgct 28923147  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||||||||||||||    
T  28923146 catcaaccttgaaatcac 28923129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 14886469 - 14886352
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| ||| || || |    
T  14886469 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcaccccctgat 14886370  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  14886369 catcaactttgaaatcac 14886352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 189
Target Start/End: Complemental strand, 23079567 - 23079455
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| ||||| |||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  23079567 atactcaaactacttttgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagaacaccctgat 23079468  T
Q  177 catcaaccttgaa 189  Q
    |||||||||||||    
T  23079467 catcaaccttgaa 23079455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 23473045 - 23473088
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  23473045 catcaactttagatggatctactgcaataccaccaccagaaata 23473088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 25848965 - 25849082
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||| ||||| || || | ||||||  | |||| |||||| ||||||||||| || | ||| |||||||||||||  ||||| || |    
T  25848965 atactcaacctactcttatgactatcatcaagaatcaacttcttcaactcatcattgtcaggaatacatactcttcctctgaacctcagaacaccctgat 25849064  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  25849065 catcaaccttaaaatcac 25849082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 193
Target Start/End: Original strand, 22503569 - 22503685
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||| ||||| || || | ||||||  | |||| |||||| ||||||||||| || | ||| |||||||||||||  ||||| || |    
T  22503569 atactcaacctactcttatgactctcctcaagaatcaacttcttcaactcatcattgtcaggaatacatactcttcctctgaacctcagaacaccctgat 22503668  T
Q  177 catcaaccttgaaatca 193  Q
    |||||||||| ||||||    
T  22503669 catcaaccttaaaatca 22503685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 23517434 - 23517596
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  | |||||| |||||||  |||| ||| ||||||||||| || |    
T  23517434 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatctttaggaatacaaattcgacctcggaatctcaacacaccatggt 23517533  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| ||||| || |||||| |||| || ||||||||| ||| || ||| || ||||||||||    
T  23517534 catcgaccttaaagtcaccatcttctgtctgattactagcaaccaataagtctacaaacttga 23517596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 18776671 - 18776840
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  18776671 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 18776770  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||| || || || || || ||| |  ||||||| ||||||||| ||| ||  ||||| ||||||||||    
T  18776771 ccgtgatcgtcgactttaaagtcatcgtcttcagtctgattactagcaaccaacaaatctacaaacttga 18776840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 23441111 - 23441280
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| || || | ||||| | | |||||||| || | |||| |||||||||| |  |||| ||| |||||||||    
T  23441111 cggatgaatactcaagctacttctatgactctcctcaagaatcattttcttcatctcttcatcgtcacgaatgcaaatccgacctcggaatctcaacaca 23441210  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || ||||| || || || |||||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  23441211 ccatggtcatcgactttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaaacttga 23441280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 23574694 - 23574799
Alignment:
Q  134 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaa 233  Q
    |||||||| ||||||| ||||| ||| ||||||||||| || ||||| ||||| ||||||||| | ||| | ||||||||| ||| ||  || || ||||    
T  23574694 tcaggaatacaaattcggcctcggaatctcaacacaccatggtcatcgaccttaaaatcaccatcctcaatctgattactagcaaccaacaagtctacaa 23574793  T
Q  234 acttga 239  Q
    ||||||    
T  23574794 acttga 23574799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 20800398 - 20800518
Alignment:
Q  119 ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaa 218  Q
    |||||||| || | ||||||||| |||||||  |||| ||| ||||||||||| || ||||| || || || |||||| ||||||| ||||||||| |||    
T  20800398 ttcatctcttcatcgtcaggaatacaaattcgacctcggaatctcaacacaccatggtcatcgactttaaagtcaccatcttcagtctgattactagcaa 20800497  T
Q  219 tcattaaatccacaaacttga 239  Q
     ||  || || ||||||||||    
T  20800498 ccaacaagtctacaaacttga 20800518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 22234489 - 22234445
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||    
T  22234489 acatcaactttcgatggatcaactgcaataccactactagaaata 22234445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 20467582 - 20467415
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  ||| ||| ||||| | ||||| |||| ||||||||||| |  |||||||| |||||| ||||||  || | ||||||    
T  20467582 cggatgaatactcaagctacttctgttactctcttcaagaatca-tcttcttcatctcatcatcatcaggaatacaaattttgcctcgaaatcgcaacac 20467484  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     || || ||||| ||||| || |||| | ||||||| ||||| | | |||| | |||||| ||||||||    
T  20467483 tccctgatcatcgaccttaaagtcactatcttcagtctgatttccaccaataaataaatctacaaactt 20467415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 14087271 - 14087440
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  14087271 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtctggaatgcaaattctgcctctgaacttcaacaca 14087370  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || ||||||||||| |||||||||| | | |||| ||||||||||  ||  |||||||||||||||||||    
T  14087371 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 14087440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 13971651 - 13971485
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  13971651 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtcgggaatgcaaattctgcctctgaacttcaacaca 13971552  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaact 236  Q
    || ||||||||||| |||||||||| | | |||| ||||||||||  ||  ||||||||||||||||    
T  13971551 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaact 13971485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 14574521 - 14574690
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||||||||||||||||| | ||||||  |||||| ||||||  | ||||||||||||||||| ||||||||||||||||||    
T  14574521 cggatgaatacttaagctactcttgtgactttcttctagaatcaactttttcaactcatcactatcaggaatgcaaattcttcctctgaacctcaacaca 14574620  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||| | ||||||||| | ||| | ||| ||| ||||| ||||||||||    
T  14574621 ccatgatcatcaaccttgaagtcactatcttcagtttcactaccagcaaccatcaaatcaacaaacttga 14574690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 10419575 - 10419407
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||||||  ||||||| ||||||||||| ||||||||  | ||||  || || ||||| ||||  |||||||||||||| || ||||| ||||    
T  10419575 ggatgaatactcaaattactcttatgactttcttctaaaatcaacttcttcaattcttcattgtcgggaacacaaattctgcctctaaatctcaatacac 10419476  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | ||||||||||| |||||||||||| | |||| |||||||||| ||| ||||||||||||||||||||    
T  10419475 cttgttcatcaactttgaaatcaccatcctcagcttgattactatcaaccattaaatccacaaacttga 10419407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 18133876 - 18133710
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||  |||||| ||| || || |||||||| | |||||| ||||||||||| |||||||    
T  18133876 ggatgaatacttaagctactcttgtgactttcttccaaaattaactttttcaactcgtcattatcaggaatactaattcttcctctgaaccttaacacac 18133777  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    | || ||||||||||| || |||| | | ||||||| ||||| ||||||||| ||||  ||||||||    
T  18133776 cctgatcatcaaccttaaagtcactatcctcagtttcattaccaacaatcatcaaatgaacaaactt 18133710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 234
Target Start/End: Complemental strand, 13300046 - 13299889
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||||||||||||||||||||| || ||||||||  ||||||   |||| |  |||||||| |||||||| |||||||||||||||||||| || |    
T  13300046 atactcaagctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatcaggaatacaaattcttcctctgaacctcaacacaccctgat 13299947  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaa 234  Q
    |||||||||||||||||| |   ||||||| || || | ||||||||||||| |||||    
T  13299946 catcaaccttgaaatcactattctcagtttcataaccagcaatcattaaatcaacaaa 13299889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 77 - 234
Target Start/End: Complemental strand, 13310704 - 13310547
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||||||||||||||||||||| || ||||||||  ||||||   |||| |  |||||||| |||||||| |||||||||||||||||||| || |    
T  13310704 atactcaagctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatcaggaatacaaattcttcctctgaacctcaacacaccctgat 13310605  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaa 234  Q
    |||||||||||||||||| |   ||||||| || || | ||||||||||||| |||||    
T  13310604 catcaaccttgaaatcactattctcagtttcataaccagcaatcattaaatcaacaaa 13310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 204
Target Start/End: Complemental strand, 16380459 - 16380325
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| |||||||||    
T  16380459 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaacaca 16380360  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagt 204  Q
    || || |||||||||||||| |||| | |||||||    
T  16380359 ccctgatcatcaaccttgaagtcactatcttcagt 16380325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 234
Target Start/End: Complemental strand, 13320026 - 13319869
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| ||||||||||||||||| || ||||||||  ||||||   |||| |  |||||||| |||||||| |||||||||||||||||||| || |    
T  13320026 atactcaatctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatcaggaatacaaattcttcctctgaacctcaacacaccctgat 13319927  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaa 234  Q
    |||||||||||||||||| |   ||||||| || || | ||||||||||||| |||||    
T  13319926 catcaaccttgaaatcactattctcagtttcataaccagcaatcattaaatcaacaaa 13319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 31694717 - 31694593
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||||||| || ||||||||  ||||||  || || |  ||||||||||||||||| |||||||| |||||||||    
T  31694717 cggatgaatactcaagctactcttgtgactttcctctaaaatcaactttttcaattcgtcatcatcaggaatgcaaattcttcctctgaatctcaacaca 31694618  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  31694617 ccctgatcatcaaccttgaagtcac 31694593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 15228247 - 15228414
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||||||||  |||||||  ||| ||| |||||||||    
T  15228247 cggatgaatacttaagctacttctgtgactttcttctaaaatcaacgttttcaactcatcattatcaggaatagaaattcttactcggaatctcaacaca 15228346  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| |||| | |||||||||| |||||| | | ||  ||||||||||||||    
T  15228347 ccttgatcatcaaccttgaagtcactatcttcagtttggttactagccaccaacaaatccacaaactt 15228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 17493235 - 17493397
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||| |||||||||||||||||||| || ||||||||  |||||| ||| || || |||||||| |||||||| ||||| |||||||||||||| || |    
T  17493235 atacttaagctactcttgtgactttcctctaaaatcaactttttcaactcgtcattatcaggaatacaaattcttcctctaaacctcaacacaccctgat 17493334  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||||||||| || |||| | ||||||| | | ||| | ||| ||| ||||| ||||||||||    
T  17493335 catcaacctttaagtcactatcttcagtgtcactaccagcaaccatcaaatcaacaaacttga 17493397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 31939501 - 31939625
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||| |||||||||||| || ||||||||  ||||||  || || |  ||||||||||||||||| |||||||| |||||||||    
T  31939501 cggatgaatactcaagctacccttgtgactttcctctaaaatcaactttttcaattcgtcatcatcaggaatgcaaattcttcctctgaatctcaacaca 31939600  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  31939601 ccctgatcatcaaccttgaagtcac 31939625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 16827732 - 16827565
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| |||||||| |||||  |||| || ||||||||  ||||||  ||||| || ||| |||| |||||| | ||||||||||||||||||||    
T  16827732 gatgaatacttaagctacttttgtgggtttcctctaaaatcaactttttcaaatcatcattatcatgaatacaaatttttcctctgaacctcaacacacc 16827633  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
     || |||||||||||||| |||  | ||||||||| ||||||| ||| ||| ||||| ||||||||||    
T  16827632 ttgatcatcaaccttgaagtcattatcttcagtttcattactagcaaccatcaaatcaacaaacttga 16827565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 11303302 - 11303188
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| |||||||||||||||||||| ||||| || ||| |||| ||||| |  ||||| || ||||||||||||||||| ||||||||||| ||||||||    
T  11303302 gatgaatactcaagctactcttgtgcctttcctctaaactcaaccttttgaaatcatcattatcaggaatgcaaattcttcctctgaaccttaacacacc 11303203  T
Q  172 gtgttcatcaacctt 186  Q
     || |||||||||||    
T  11303202 ctgatcatcaacctt 11303188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 15234128 - 15234282
Alignment:
Q  83 aagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaa 182  Q
    ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||||||||  |||||||  ||| ||| ||||||||||| || |||||||    
T  15234128 aagctacttctgtgactttcttctaaaatcaacgttttcaactcatcattatcaggaatagaaattcttactcggaatctcaacacaccttgatcatcaa 15234227  T
Q  183 ccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||||| |||| | |||||||||| |||||| | | ||  ||||||||||||||    
T  15234228 ccttgaagtcactatcttcagtttggttactagccaccaacaaatccacaaactt 15234282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 47124549 - 47124666
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || |||||||||||||||| ||| |||||||||||||||||||| || |    
T  47124549 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcctcattgtcaggaatgcaaactctacctctgaacctcaacacaccctgat 47124648  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  47124649 catcaactttgaaatcac 47124666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 16329184 - 16329067
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| |||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  16329184 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgat 16329085  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  16329084 catcaaccttaaaatcac 16329067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 12359994 - 12359891
Alignment:
Q  134 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaa 233  Q
    ||||||||||||||||| |||||||| ||||||||||| || |||||||||||||| |||| | | |||||   ||||| ||||| ||||||||| ||||    
T  12359994 tcaggaatgcaaattcttcctctgaatctcaacacaccctgatcatcaaccttgaagtcactatcctcagtgccattaccaacaaccattaaatcaacaa 12359895  T
Q  234 actt 237  Q
    ||||    
T  12359894 actt 12359891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 10384573 - 10384690
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  10384573 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 10384672  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  10384673 catcaaccttaaaatcac 10384690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 28754923 - 28755040
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  28754923 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 28755022  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  28755023 catcaactttgaaatcac 28755040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 4679036 - 4679160
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  4679036 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 4679135  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || ||||||||||||||||| ||||    
T  4679136 ccctgttcatcaaccttgaagtcac 4679160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 8758613 - 8758489
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  8758613 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 8758514  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || ||||||||||||||||| ||||    
T  8758513 ccctgttcatcaaccttgaagtcac 8758489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 41178120 - 41178244
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || |  |||||  ||||||| || || || |||||||| |||||||| |||||||  |||||||||    
T  41178120 cggatgaatgcttaagctactcttatgactttcctctaggatcaactttttcatttcttcattatcaggaatacaaattctacctctgattctcaacaca 41178219  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || ||||||||||||||||| ||||    
T  41178220 ccctgttcatcaaccttgaagtcac 41178244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 15248735 - 15248820
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctc 155  Q
    |||||| ||||||||||||||  | ||||||||||| | |||| ||||| ||||||||||||| ||||||||| |||||||||||||    
T  15248735 cggatgaatactcaagctacttctatgactttcttcaagaatc-atcttcttcatctcatcgtcgtcaggaatacaaattctgcctc 15248820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 204
Target Start/End: Complemental strand, 16836040 - 16835907
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaa-tcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||| |||||||||||||||||||||||||| || ||||| || | |||| || || || ||||||||||| |||||||| |||||||| || || ||     
T  16836040 ggatgaatactcaagctactcttgtgactttcctctaaaattaacttttttgat-tcttcattgtcaggaatacaaattctacctctgaatcttaatact 16835942  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagt 204  Q
    || || |||||||| ||||| |||| | |||||||    
T  16835941 ccctgatcatcaactttgaagtcactatcttcagt 16835907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 11960693 - 11960584
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| ||||| | |||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  11960693 atactcaaactactatcgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaaatcttcctctgaacctcagcacaccctgat 11960594  T
Q  177 catcaacctt 186  Q
    ||||||||||    
T  11960593 catcaacctt 11960584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 16338036 - 16337927
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||| ||||| || || | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  16338036 atactcaacctactcttatgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgat 16337937  T
Q  177 catcaacctt 186  Q
    ||||||||||    
T  16337936 catcaacctt 16337927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 44777845 - 44777976
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| || | ||||    
T  44777845 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatcttagcaca 44777944  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttc 201  Q
    || || |||||||||||||| |||||| ||||    
T  44777945 ccctgatcatcaaccttgaagtcaccatcttc 44777976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 12360073 - 12360021
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttca 122  Q
    |||||| |||||||||||||||||||||||||| || ||||||||  ||||||    
T  12360073 cggatgaatactcaagctactcttgtgactttcctctaaaatcaactttttca 12360021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 15209479 - 15209623
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||||| |||| |||  |||||||||||||  || | ||||||     
T  15209479 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcgtcgtcaagaaaacaaattctgcctcgaaaacgcaacact 15209578  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || ||||| |  || ||||||| | ||||||| |||||||||    
T  15209579 ccatgatcatcgattttaaaatcactatcttcagtctgattacta 15209623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 174
Target Start/End: Original strand, 16692752 - 16692856
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | ||||||||||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  16692752 cggatgaatactcaagctacttctatgactctcttcaagaatcatttttttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 16692851  T
Q  170 ccgtg 174  Q
    |||||    
T  16692852 ccgtg 16692856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 16826818 - 16826774
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| |||||||| ||||||||||||| ||||||||||    
T  16826818 acatcaactttggatggatcaactgcaataccactactagaaata 16826774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 17491354 - 17491398
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||| ||||||||||||||||||| || |||||||    
T  17491354 acatcaactttagacggatctactgcaataccactaccagaaata 17491398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 12498843 - 12499005
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| || || | ||||| | | |||||||| || | ||||||||||||||| |  |||| ||| ||||||||||| || |    
T  12498843 atactcaagctacttctatgactctcctcaagaatcattttcttcatctcttcatcgtcaggaatgcaaatccgacctcggaatctcaacacaccatggt 12498942  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| || || || |||||| ||||||| | ||||||| ||| ||  || || ||||||||||    
T  12498943 catcgactttaaagtcaccaacttcagtctaattactagcaaccaacaagtctacaaacttga 12499005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 16372007 - 16372144
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| |  |  |||||||| ||||||| | ||| ||| ||||||||||| || |    
T  16372007 atactcaagctacttctatgactctcttcaagaatcattttcttcatctctttatcatcaggaatacaaattcgggctcggaatctcaacacaccatggt 16372106  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||| ||||| ||  ||||| ||||||| |||||||||    
T  16372107 catcgaccttaaagccaccatcttcagtctgattacta 16372144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 13942622 - 13942746
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| || | ||||    
T  13942622 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatcttagcaca 13942721  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||| ||| ||||    
T  13942722 ccctgatcatcaacctggaagtcac 13942746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 106; Significance: 4e-53; HSPs: 6)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 49820 - 49651
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  49820 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttatcaggaatgcaaattctgcatctgaacttcaacaca 49721  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || ||||||||||| |||||||||| | | |||| || |||||||  ||  |||||||||||||||||||    
T  49720 ccttgttcatcaactttgaaatcactatcctcagcttcattactattaactattaaatccacaaacttga 49651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 9474 - 9584
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||||||||||||||||||| ||||||| ||||| | |||| ||||| || ||||| || ||||| ||||| |||||||| |||| ||| |||| |||    
T  9474 cggatggatactcaagctactcctgtgactctcttcaagaatc-atcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaccac 9572  T
Q  169 accgtgttcatc 180  Q
    ||| || |||||    
T  9573 accttgatcatc 9584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 15936 - 16046
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||||||||||||||||||| ||||||| ||||| | |||| ||||| || ||||| |  ||||| ||||| |||||||| |||| ||| |||| |||    
T  15936 cggatggatactcaagctactcctgtgactctcttcaagaatc-atcttcttaatctctttattgtctggaatacaaattcttcctcggaatctcaccac 16034  T
Q  169 accgtgttcatc 180  Q
    ||| || |||||    
T  16035 accttgatcatc 16046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 922 - 753
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| |||||||||||||| |||||||| ||||||| |||| ||||| || ||||| || | |||  |||| |||||||| ||||  |||||||| ||    
T  922 cggatgaatactcaagctacttttgtgactctcttccagaatc-atcttctttatctcttcatcgtctagaatacaaattctacctcgaaacctcaatac 824  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||| || ||||| |  || |||||||   ||||||| ||||||||| ||| ||  ||  ||||||||||||    
T  823 accatgatcatcgattttaaaatcactgtcttcagtctgattactagcaaccaacaaggccacaaacttga 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 10393 - 10434
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||| || ||||||||| |||||||||||    
T  10393 tcaactttagatggatccacagcaataccatcactagaaata 10434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 16855 - 16896
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||| || ||||||||| |||||||||||    
T  16855 tcaactttagatggatccacagcaataccatcactagaaata 16896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 19856 - 20018
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||||||||||||||||||||| || ||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  19856 atactcaagctactcttgtgactttcctctaaaattaactttttcatctcatcattgtcaggaatgcaaattctgcctctgaacctcaacacaccttgtt 19955  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||||| |||||||||| | |||||| |||||||| |  || ||||||||||||||||||||    
T  19956 catcaactttgaaatcactatcttcagcttgattaccattaaccattaaatccacaaacttga 20018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 24018 - 24180
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||||||||||||||||||||| || ||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24018 atactcaagctactcttgtgactttcctctaaaattaactttttcatctcatcattgtcaggaatgcaaattctgcctctgaacctcaacacaccttgtt 24117  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||||| |||||||||| | |||||| |||||||| |  || ||||||||||||||||||||    
T  24118 catcaactttgaaatcactatcttcagattgattacaataaaacattaaatccacaaacttga 24180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 6974 - 6822
Alignment:
Q  87 tactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaacctt 186  Q
    ||||||||||||||||||| |||||||  |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  6974 tactcttgtgactttcttctaaaatcagccttttcatctcatcattgtcaggaacacaaattctgcctctgaacctcaacacaccgtgttcatcaacctt 6875  T
Q  187 gaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||||||| | |||||||||||||||||  || | |||||||||||| |||||    
T  6874 gaaatcactatcttcagtttgattactattaacccttaaatccacaagcttga 6822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 3e-50; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 19852447 - 19852615
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||||||||||||||||| |||||||||||||||||||    
T  19852447 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatgcaaattcttcctctgaacctcaacacac 19852546  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || |||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  19852547 cctgatcatcatccttgaaatcaccatcttcagtttgaatactagcaatcattaaatccacaaacttga 19852615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 19858483 - 19858651
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||||||||||||||||| |||||||||||||||||||    
T  19858483 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatgcaaattcttcctctgaacctcaacacac 19858582  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || |||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  19858583 cctgatcatcatccttgaaatcaccatcttcagtttgaatactagcaatcattaaatccacaaacttga 19858651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 21841453 - 21841621
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  ||||||  ||||| || |||||||||||||| || |||||||||||||||||||    
T  21841453 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaaatcatcattatcaggaatgcaaatccttcctctgaacctcaacacac 21841552  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || ||||||||||||||||||||  ||||||||| ||||||| ||| ||||||||||||||||||||    
T  21841553 cctgatcatcaaccttgaaatcaccctcttcagtttaattactagcaaccattaaatccacaaacttga 21841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 1267274 - 1267397
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| ||||||||||    
T  1267274 ggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaacacac 1267373  T
Q  171 cgtgttcatcaaccttgaaatcac 194  Q
    | || |||||||||||||||||||    
T  1267374 cctgatcatcaaccttgaaatcac 1267397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 20009665 - 20009497
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||| |||| |||||||| |||||||||||||||||||    
T  20009665 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcaagaatacaaattcttcctctgaacctcaacacac 20009566  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || |||||||||||||| |||||  |||||||| ||||||||  || |||||||||||||| |||||    
T  20009565 cttgatcatcaaccttgaagtcaccctcttcagttcgattactagtaaccattaaatccacaagcttga 20009497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 31416220 - 31416053
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| ||||| ||     
T  31416220 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaatacg 31416121  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| |||| | | ||||| | ||||| |  |||||||||||| ||||||||    
T  31416120 ccctgatcatcaaccttgaagtcactatcctcagtgtcattaccagtaatcattaaatcaacaaactt 31416053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 23655962 - 23656131
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||| |||||||| ||||||  ||||||  ||||| || ||||||||||||||||| ||||||||||||||||||    
T  23655962 cggatgaatacttaagctactcttgtgaccttcttccagaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 23656061  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || ||||||||||| || |||| | | ||||||| ||||| | ||| ||| ||||| ||||||||||    
T  23656062 ccctgatcatcaaccttaaagtcactatcctcagtttcattaccagcaaccatcaaatcaacaaacttga 23656131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 20985270 - 20985124
Alignment:
Q  93 tgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatc 192  Q
    ||||||||||||||||||||||  |||||| |||||| || | |||||| |||||||| ||||| |||||||||||||| || |||||||||||||| ||    
T  20985270 tgtgactttcttccaaaatcaactttttcaactcatcatttttaggaatacaaattcttcctctaaacctcaacacaccctgatcatcaaccttgaagtc 20985171  T
Q  193 accaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| ||||||||| |||||||  ||  |||||||| ||||||||||    
T  20985170 accatcttcagtttcattactagtaactattaaatcaacaaacttga 20985124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 20389134 - 20389278
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||   ||||||||||||| ||||||||  |||||| |||||| || |||||||| ||||||||||||| ||| |||||||||    
T  20389134 cggatgaatacttaagctacgtatgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatacaaattctgcctcggaatctcaacaca 20389233  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || |||||||||||||| |||| | ||||||||||| |||||    
T  20389234 ccttgatcatcaaccttgaagtcactatcttcagtttgaatacta 20389278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 20975390 - 20975230
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||||||||||||||||||||| || ||||||||  ||||||   |||| |  ||||||||||||||||| |||||||||||||||||||| || |    
T  20975390 atactcaagctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatcaggaatgcaaattcttcctctgaacctcaacacaccctgat 20975291  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||||||||||| |||| | | |||||   ||||| | ||| ||||||||| ||||||||    
T  20975290 catcaaccttgaagtcactatcctcagtgccattaccagcaaccattaaatcaacaaactt 20975230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 235
Target Start/End: Original strand, 22371982 - 22372140
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||| ||||||||  ||||||||||||| | ||||||  |||||| ||||||  | ||||||||| | ||||| |||||||||||||||||||   | |    
T  22371982 atacttaagctacttctgtgactttcttctataatcaactttttcaactcatcactatcaggaatgaatattcttcctctgaacctcaacacacacagat 22372081  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaac 235  Q
    |||||||||||||||||||   ||| |||||||||||| ||| ||||||||||||||||    
T  22372082 catcaaccttgaaatcacccttttcggtttgattactagcaaccattaaatccacaaac 22372140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 22051898 - 22052056
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||| ||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||     
T  22051898 cggatgaatactcaacctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatact 22051997  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatc 228  Q
    || || |||||||||||||| |||| | | || ||   ||||||| |||||||||||||    
T  22051998 ccctgatcatcaaccttgaagtcactatcctccgtgccattactagcaatcattaaatc 22052056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 803412 - 803295
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  803412 atactcaacctactcttgtgactctcctctagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 803313  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  803312 catcaactttgaaatcac 803295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 6604700 - 6604817
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| || | ||| || |||||||||| |||||| || |    
T  6604700 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacagactctacccctgaacctcagcacaccctgat 6604799  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||||||||||||||    
T  6604800 catcaaccttgaaatcac 6604817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 6680153 - 6680270
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| || | ||| || |||||||||| |||||| || |    
T  6680153 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacagactctacccctgaacctcagcacaccctgat 6680252  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||||||||||||||    
T  6680253 catcaaccttgaaatcac 6680270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 12305800 - 12305917
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||| ||||| ||||| | ||| ||  | |||| |||||| |||||||||||||| | ||| | |||||||||||| ||||| || |    
T  12305800 atactcaacctactcttatgactctcttcaagaattaacttcttcaactcatcattgtcaggaatgcatactcttcatctgaacctcaaaacaccctgat 12305899  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  12305900 catcaaccttaaaatcac 12305917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 31570588 - 31570464
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  31570588 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 31570489  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  31570488 ccctgatcatcaaccttgaagtcac 31570464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 22248163 - 22247996
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||| |||||||||  | ||||| ||||| | ||||| | | |||||||| ||  |||||||||| ||||||||||||  ||| ||||||||     
T  22248163 cggatgaatacacaagctacttctatgactctcttcaagaatcattttcttcatctcgtcaatgtcaggaatacaaattctgccttggaatctcaacact 22248064  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||| |  || ||||||| | ||||||| ||||||||| ||||||  || |||||||||||    
T  22248063 ccctgatcatcgattttaaaatcactatcttcagtctgattactagcaatcaacaagtccacaaactt 22247996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 22988231 - 22988398
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| | || ||||||  |||||||||||| ||| ||||||||     
T  22988231 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcgtaaggaatagaaattctgcctcggaatctcaacacg 22988330  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||| |  || ||||||| | ||||||| |||||||||  |||||  || |||||||||||    
T  22988331 ccttgatcatcgattttaaaatcactatcttcagtctgattactagaaatcaacaattccacaaactt 22988398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 16407784 - 16407622
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || | ||||||||||||||| |  |||| ||| ||||||||||| || |    
T  16407784 atactcaagctacttctatgactctcttcaagaatcattttattcatctcttcatcgtcaggaatgcaaatccgacctcggaatctcaacacaccatggt 16407685  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| || || || |||||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  16407684 catcgactttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaaacttga 16407622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 29303162 - 29303056
Alignment:
Q  80 ctcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcat 179  Q
    ||||| |||||||||||||| ||| | | ||||||| | ||||  ||||| ||||||||||| |||| ||| | ||||||||||| |||||| || ||||    
T  29303162 ctcaacctactcttgtgactctctacaagaatcaatttcttcaaatcatcattgtcaggaatacaaactcttcatctgaacctcagcacaccctgatcat 29303063  T
Q  180 caacctt 186  Q
    |||||||    
T  29303062 caacctt 29303056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 14566184 - 14566301
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| ||||| |||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  14566184 atactcaacctacttttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 14566283  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| || |||||||    
T  14566284 catcaactttaaaatcac 14566301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 16270963 - 16270846
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| || | ||| |||||||||||||  ||||| || |    
T  16270963 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacatactcttcctctgaacctcagtacaccctgat 16270864  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  16270863 catcaaccttaaaatcac 16270846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 19979002 - 19979171
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |||||| |||| |||||||  |||| ||| ||||| |||    
T  19979002 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcattgtcaagaatacaaattcgacctcggaatctcaataca 19979101  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || ||||| ||||| || |||||| ||||||  ||||||||| ||| ||  || || ||||||||||    
T  19979102 ccatggtcatcgaccttaaagtcaccatcttcagcctgattactagcaaccaacaagtctacaaacttga 19979171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 27355590 - 27355698
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | |||||| | || || ||||||| |||||||||| |||| ||| |||||||| ||||  ||||| || |    
T  27355590 atactcaatctactcttgtgactatcttcaagaatcaaccctt-caactcatcgctgtcaggaatacaaactctccctctgaatctcagtacaccctgat 27355688  T
Q  177 catcaacctt 186  Q
    ||||||||||    
T  27355689 catcaacctt 27355698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 22376282 - 22376239
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  22376282 catcaactttagatggatctactgcaataccactaccagaaata 22376239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 22382457 - 22382414
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  22382457 catcaactttagatggatctactgcaataccactaccagaaata 22382414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 30312890 - 30312721
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  30312890 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 30312791  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||| || || || || || |||||  ||||||| ||||||||| |||  |  ||||| ||||||||||    
T  30312790 ccgtgatcgtcgactttaaagtcaccgtcttcagtctgattactagcaactaacaaatctacaaacttga 30312721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 22377200 - 22377056
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||| |  | ||||| ||||| | ||||| | | ||||||||||| | || |||||| ||||||||||||| ||| ||||||||     
T  22377200 cggatgaatactcaagctatttctatgactctcttcaagaatcattttcttcatctcatcatcgttaggaatacaaattctgcctcagaatctcaacact 22377101  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    ||  | ||||| |  || ||||||| | ||||||| |||||||||    
T  22377100 cccagatcatcgattttaaaatcactatcttcagtctgattacta 22377056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 22383375 - 22383231
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||| |  | ||||| ||||| | ||||| | | ||||||||||| | || |||||| ||||||||||||| ||| ||||||||     
T  22383375 cggatgaatactcaagctatttctatgactctcttcaagaatcattttcttcatctcatcatcgttaggaatacaaattctgcctcagaatctcaacact 22383276  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    ||  | ||||| |  || ||||||| | ||||||| |||||||||    
T  22383275 ccccgatcatcgattttaaaatcactatcttcagtctgattacta 22383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 22422721 - 22422678
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||    
T  22422721 catcaactttagagggatctactgcaataccatcaccagaaata 22422678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 23949954 - 23950052
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||  |||| ||||||||||| ||||||||||| ||| ||||||||| ||| | ||||||    
T  23949954 cggatgaatactcaagctacttatgtgactctcttcaagaatcg-tcttcttcatctcatcattgtcaggaatacaatttctgcctcggaatcgcaacac 23950052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 20395878 - 20395793
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctc 155  Q
    |||||| ||||||||||||||  ||||||||||||| | |||| ||||| || |||||||| ||||| |||||  ||||||||||||    
T  20395878 cggatgaatactcaagctacttctgtgactttcttcaagaatc-atcttctttatctcatcattgtcgggaatataaattctgcctc 20395793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 21166277 - 21166115
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || | ||  ||||| |||||||  |||| ||| ||||||||||| || |    
T  21166277 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcgttgggaatacaaattcgacctcggaatctcaacacaccatggt 21166178  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| ||||| || || ||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  21166177 catcgaccttaaagtctccatcttcagtctgattactagcaaccaacaagtctacaaacttga 21166115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 19864921 - 19864880
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  19864921 tcaactttagacggatctactgcaataccactaccagaaata 19864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 21920575 - 21920534
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  21920575 tcaactttagacggatctactgcaataccactaccagaaata 21920534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 32601179 - 32601348
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||||||  | ||||| ||||| | ||||| |   ||||||||  | | ||| ||||| ||||| |  |||| ||| |||||||||    
T  32601179 cggatggatactcaagctacttctatgactctcttcaagaatcatttccttcatctctgcatcgtcgggaatacaaatccgacctcggaatctcaacaca 32601278  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||| ||||| || || || |||||  ||||||| ||||||||| ||| ||  ||||| ||| ||||||    
T  32601279 ccgtgatcatcgactttaaagtcaccgtcttcagtctgattactagcaaccaacaaatctacatacttga 32601348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 23886108 - 23886144
Alignment:
Q  119 ttcatctcatcgttgtcaggaatgcaaattctgcctc 155  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  23886108 ttcatctcatcattgtcaggaatacaaattctgcctc 23886144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 48104 - 48273
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||  |||||| |||||| || |||||||| |||||||| ||||||||||||||||||    
T  48104 cggatgaatacttaagctacttttgtgactttcttccagaatcaactttttcaactcatcattatcaggaatacaaattcttcctctgaacctcaacaca 48203  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || |  ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||    
T  48204 ccttcatcatcaaccttgaaatcaccatcttcagtttgattactagcaaccattaaatcaacaaacttga 48273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 27524 - 27693
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  ||||||||||||||||||||||  |||||| |||||| || ||||||||||||||||| ||||||||||||||||||    
T  27524 cggatgaatacttaagctacttctgtgactttcttccaaaatcaactttttcaactcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 27623  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||| ||||| ||| ||  |||||||||||||||| ||| ||||||||||||||||||||    
T  27624 ccctgatcatcaacattgaagtcatcattttcagtttgattactagcaaccattaaatccacaaacttga 27693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 48338 - 48171
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| ||||||||| | || |||||||||||||||||  |||||| |||||| || |||||||| |||||||| ||||||||||||||||||||    
T  48338 gatgaatacttaagctactcctatggctttcttccaaaatcaactttttcaactcatcattatcaggaatacaaattcttcctctgaacctcaacacacc 48239  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
     || ||||||||||||||||||| | ||||||||||||||||| ||| ||||||||| ||||||||||    
T  48238 ctgatcatcaaccttgaaatcactatcttcagtttgattactagcaaccattaaatcaacaaacttga 48171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 57153 - 56986
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||     || |  ||||||||||||||||| || ||||||||||| ||     
T  57153 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaaactgtcatcatcaggaatgcaaattcttcccctgaacctcaatact 57054  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| |||| | ||||| |   ||||| ||||| ||| ||||| ||||||||    
T  57053 ccctgatcatcaaccttgaagtcactatcttcaatgccattaccaacaaccatcaaatcaacaaactt 56986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2112 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold2112
Description:

Target: scaffold2112; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 1 - 147
Alignment:
Q  93 tgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatc 192  Q
    ||||||||||||| ||||||||  |||||| ||||||||| ||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||    
T  1 tgtgactttcttctaaaatcaactttttcaactcatcgttatcaggaatgcaaattcttcctctgaacctcaacaccccctgatcatcaaccttgaaatc 100  T
Q  193 accaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||  ||||||||||||||||| ||| ||||||||| ||||||||||    
T  101 accctcttcagtttgattactagcaaccattaaatcaacaaacttga 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 89751 - 89582
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||  |||||||||||||||||||||| ||||||||  ||||||  ||||| |||||||||||||||||||| ||||||||||||||||||    
T  89751 cggatgaatactttagctactcttgtgactttcttctaaaatcaactttttcaaatcatcattgtcaggaatgcaaattcttcctctgaacctcaacaca 89652  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||| | ||||||||| ||||||| ||| ||| ||||| ||||||||||    
T  89651 ccctgatcatcaaccttgaagtcactatcttcagtttcattactagcaaccatcaaatcaacaaacttga 89582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 90429 - 90260
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||  |||||||||||||||||||||| ||||||||  ||||||  ||||| |||||||||||||||||||| ||||||||||||||||||    
T  90429 cggatgaatactttagctactcttgtgactttcttctaaaatcaactttttcaaatcatcattgtcaggaatgcaaattcttcctctgaacctcaacaca 90330  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||| | ||||||||| ||||||| ||| ||| ||||| ||||||||||    
T  90329 ccctgatcatcaaccttgaagtcactatcttcagtttcattactagcaaccatcaaatcaacaaacttga 90260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 494934 - 494977
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||||||||||| |||||||||| || |||||||    
T  494934 catcaactttagatggatctaccgcaataccactaccagaaata 494977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 18349 - 18518
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||| |||| ||||||||||| ||||||  |||||| ||||||  | ||| ||||||||||||| ||||||||||||||||||    
T  18349 cggatgaatacttaagctacttttgttactttcttccagaatcaactttttcaactcatcactatcatgaatgcaaattcttcctctgaacctcaacaca 18448  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||| | ||||||||||||||||| ||| ||||||||| ||||||||||    
T  18449 ccctgatcatcaaccttgaagtcactatcttcagtttgattactagcaaccattaaatcaacaaacttga 18518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 15002667 - 15002498
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||| |||||||||||||| | ||||||| ||||||  ||||| || |||||||| |||||||| ||||||||||||||||||    
T  15002667 cggatgaatacttaagctacttttgtgactttcttctagaatcaattttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacaca 15002568  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||  | ||||||||| ||||||| ||| ||||||||||||||||||||    
T  15002567 ccctgatcatcaaccttgaagtcattatcttcagtttcattactagcaaccattaaatccacaaacttga 15002498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 70 - 234
Target Start/End: Complemental strand, 1648580 - 1648416
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || | ||| || ||||||| |||||| || |||||||| |||||||||| |||||| |||||||||    
T  1648580 cggatgaatacttaagctactcttgtgactttcctctagaattaaccttttcaactcatcattatcaggaatacaaattctgcttctgaatctcaacaca 1648481  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaa 234  Q
    || ||||||||||||||||||||||||   ||||||| ||||| | ||||||||||||| |||||    
T  1648480 ccttgttcatcaaccttgaaatcaccattctcagtttcattaccagcaatcattaaatcaacaaa 1648416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 8706887 - 8707054
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||| |||| |||||||||||||| ||||||||  |||||| |||||| || |||||||| ||||||||||||| ||| |||||||||    
T  8706887 cggatgaatacttaagttacttttgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatacaaattctgcctcggaatctcaacaca 8706986  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| |||||| ||||||||||||||||| ||| ||  || |||||||||||    
T  8706987 ccttgatcatcaaccttgaagtcaccatcttcagtttgattactagcaaccaacaagtccacaaactt 8707054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 27901355 - 27901522
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||| ||||||| ||||||||||| ||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  27901355 cggatgaatactcaagttactcttatgactttcttctaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacaca 27901454  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || |||||||||||||||||||| | | | |||| ||||||||||  || ||||||||||||||||||    
T  27901455 ccttgttcatcaaccttgaaatctctatcctcagcttgattactagtaaccattaaatccacaaactt 27901522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 15414328 - 15414162
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| || |||||  ||||||||||||||||||||||  |||||| |||||| || | |||||| |||||||| |||| ||| ||||||||||    
T  15414328 ggatgaatacttaaactacttctgtgactttcttccaaaatcaactttttcaactcatcattatgaggaatacaaattcttcctcagaatctcaacacac 15414229  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    | || |||| ||||||||||||||   ||||||||||||||||||||| ||  ||||||||||||||    
T  15414228 cctgatcatgaaccttgaaatcactttcttcagtttgattactaacaaccaacaaatccacaaactt 15414162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 15246893 - 15247062
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||  |||||| ||| || || |||||||| |||||||| || |||||||||||||||    
T  15246893 cggatgaatacttaagctactcttgtgactttcctccagaatcaactttttcaactcgtcattatcaggaatacaaattcttcccctgaacctcaacaca 15246992  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||| | ||||||| | ||||| | ||| ||| ||||| ||||||||||    
T  15246993 ccttgatcatcaaccttgaagtcactatcttcagtgtcattaccagcaaccatcaaatcaacaaacttga 15247062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 15078605 - 15078773
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  | ||||||||||||| ||||||  |||||| ||||||  | ||| ||||||||||||| ||||||||||| |||||||    
T  15078605 ggatgaatacttaagctacttctatgactttcttccagaatcaactttttcaactcatcactatcaagaatgcaaattcttcctctgaaccttaacacac 15078704  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || ||||| |||||||||||  |  ||||||||||||||||| ||  ||||||||||||||||||||    
T  15078705 cctgctcatcgaccttgaaatcttcctcttcagtttgattactagcatccattaaatccacaaacttga 15078773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 71 - 212
Target Start/End: Original strand, 15320120 - 15320261
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  ||||||||||||  ||||||||  |||||| |||||| || ||||||||| ||||||| |||||||||||||||||||    
T  15320120 ggatgaatacttaagctacttctgtgactttcttttaaaatcaactttttcaactcatcattatcaggaatgtaaattcttcctctgaacctcaacacac 15320219  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattac 212  Q
    | || |||||||||||||  |||||| ||||||||| |||||    
T  15320220 cctgatcatcaaccttgaggtcaccatcttcagtttaattac 15320261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 15358423 - 15358307
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||  || ||||||||  ||||||  ||||| || ||||||||||||||||| ||||||||||||||||||    
T  15358423 cggatgaatacttaagctactcttgtgactttactctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 15358324  T
Q  170 ccgtgttcatcaacctt 186  Q
    || || |||||||||||    
T  15358323 ccctgatcatcaacctt 15358307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 16148680 - 16148790
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||| ||||| |||||||||||||| |||| | ||||  |||||| | | || ||||||||||| |||||||| ||| ||||||||||||||    
T  16148680 cggatggatacttaagctgctcttgtgactttcctccagagtcaactttttcaacccttcattgtcaggaatacaaattcttcctatgaacctcaacaca 16148779  T
Q  170 ccgtgttcatc 180  Q
    || || |||||    
T  16148780 ccctgatcatc 16148790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 16152826 - 16152936
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||| ||||| |||||||||||||| |||| | ||||  |||||| | | || ||||||||||| |||||||| ||| ||||||||||||||    
T  16152826 cggatggatacttaagctgctcttgtgactttcctccagagtcaactttttcaacccttcattgtcaggaatacaaattcttcctatgaacctcaacaca 16152925  T
Q  170 ccgtgttcatc 180  Q
    || || |||||    
T  16152926 ccctgatcatc 16152936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 3264090 - 3263973
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  3264090 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 3263991  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  3263990 catcaactttgaaatcac 3263973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 193
Target Start/End: Complemental strand, 29452833 - 29452717
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  29452833 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 29452734  T
Q  177 catcaaccttgaaatca 193  Q
    ||||||| |||||||||    
T  29452733 catcaactttgaaatca 29452717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 44661162 - 44661045
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || || |||||||| |||| ||| ||||||||||||| |||||| || |    
T  44661162 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattatcaggaatacaaactctacctctgaacctcagcacaccctgat 44661063  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  44661062 catcaaccttaaaatcac 44661045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 214
Target Start/End: Original strand, 14695090 - 14695226
Alignment:
Q  78 tactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttc 177  Q
    |||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| | ||||||||| ||||||||||||| ||| |||||||| || || ||    
T  14695090 tactcaagctacttatatgactctcttcaagaatcattttcttcatctcatcatcgtcaggaatacaaattctgcctcggaatctcaacactccctgatc 14695189  T
Q  178 atcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    ||| |  || ||||||| | ||||||||| |||||||    
T  14695190 atcgattttaaaatcactatcttcagtttaattacta 14695226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 33223899 - 33224011
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||| ||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||||||| |||||||||| ||  ||||| || |    
T  33223899 atactcaacctactcttatgactctcttctagaatcaacttcttcaaatcatcattgtcaggaatacaaattcttcctctgaaccacagaacaccctgat 33223998  T
Q  177 catcaaccttgaa 189  Q
    |||||||||||||    
T  33223999 catcaaccttgaa 33224011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 14695999 - 14696042
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  14695999 catcaactttagatggatctactgcaataccactactagaaata 14696042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 11206527 - 11206410
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| ||||| |||||||| || || | ||||||  | ||||  ||||| ||||||||||| ||||  || ||||||||||||| |||||| || |    
T  11206527 atactcaacctactattgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacaaacccttcctctgaacctcagcacaccctgat 11206428  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  11206427 catcaaccttaaaatcac 11206410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 20891958 - 20892075
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||||||||||| ||| |||| |||  ||||||||||||  | ||| || |    
T  20891958 atactcaacctactcttgtgactctcttcaagaatcaacttcttcaaatcatcgttgtcagaaatacaaactctttctctgaacctcaggaaaccctgat 20892057  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  20892058 catcaaccttaaaatcac 20892075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 14850409 - 14850293
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||| | ||||| | ||||| | | ||||||||||| | ||||||||| ||||||||||||| ||| ||||||||     
T  14850409 cggatgaatactcaagctacttctatgaatctcttcaagaatcattttcttcatctcatcatcgtcaggaatacaaattctgcctcggaatctcaacacg 14850310  T
Q  170 ccgtgttcatcaacctt 186  Q
    || || ||||| |||||    
T  14850309 ccttgatcatcgacctt 14850293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 14849492 - 14849449
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  14849492 catcaactttagatggatctactgcaataccactaccagaaata 14849449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 15146928 - 15146759
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| || ||||  |||| ||| |||||||||    
T  15146928 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacatattcgacctcggaatctcaacaca 15146829  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || |||| ||| ||||| || |||||  ||||||| ||||||||| | | || ||| || ||||||||||    
T  15146828 ccatgtttatcgaccttaaattcaccttcttcagtctgattactagctaccaataagtctacaaacttga 15146759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 18614804 - 18614698
Alignment:
Q  133 gtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccaca 232  Q
    |||| |||||||||| |  |||| ||| |||||||||||||| || || || || |||||||   ||||||| ||||||||| ||| || |||||| |||    
T  18614804 gtcaagaatgcaaatccgacctcagaatctcaacacaccgtgatcgtcgactttaaaatcacagtcttcagtctgattactagcaaccaataaatctaca 18614705  T
Q  233 aacttga 239  Q
    |||||||    
T  18614704 aacttga 18614698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 18226489 - 18226320
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||| ||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  18226489 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatatctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 18226390  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||| || || || || || |||||  ||||||| ||||||||| ||| ||  || || ||||||||||    
T  18226389 ccgtgctcgtcgactttaaagtcaccgtcttcagtctgattactagcaaccaacaagtctacaaacttga 18226320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 16149596 - 16149640
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| |||||||| ||||||||||||| || |||||||    
T  16149596 acatcaactttcgatggatcaactgcaataccactaccagaaata 16149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 16153742 - 16153786
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| |||||||| ||||||||||||| || |||||||    
T  16153742 acatcaactttcgatggatcaactgcaataccactaccagaaata 16153786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 70 - 238
Target Start/End: Original strand, 3176 - 3344
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||| ||||||| |||||||| |||||   |||||| |||||| || |||||||| |||||||| ||||||||||||||||||    
T  3176 cggatgaatacttaagctacttttgtgacattcttccagaatcatctttttcaactcatcattatcaggaatacaaattcttcctctgaacctcaacaca 3275  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttg 238  Q
    || |   |||||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||||    
T  3276 ccctcaccatcaaccttgaaatcaccatcttcagtttgattactagcaaccattaaatcaacaaacttg 3344  T

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Target: scaffold0523 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 870 - 1038
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  |||| |||||| ||||||||||  ||||||  |||| ||| |||||||| |||||||| |||||||||||||||||||    
T  870 ggatgaatacttaagctacttctgtggctttctaccaaaatcaactttttcaaatcattgttatcaggaatacaaattcttcctctgaacctcaacacac 969  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || ||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||| ||||||||||    
T  970 cctgatcatcaaccttgaaatcaccatcttcagtttcattactagcaaccattaaatcaacaaacttga 1038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 24378 - 24211
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||  |||||| |||||| || |||||||| ||||||||||||| ||| |||||||||    
T  24378 cggatgaatacttaagctacttttgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatacaaattctgcctcggaatctcaacaca 24279  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| |||||| ||||||||||||||||| ||| ||  || |||||||||||    
T  24278 ccttgatcatcaaccttgaagtcaccatcttcagtttgattactagcaaccaacaagtccacaaactt 24211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 70 - 204
Target Start/End: Complemental strand, 2636 - 2502
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  |||||| | |||| |||||||| || |||||||||||||||||||||||||||    
T  2636 cggatgaatactcaagctactcttgtgactttcttccaaaatcaactttttcaacccatcattgtcagggatacaaattctgcctctgaacctcaacaca 2537  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagt 204  Q
    || || |||||||||||||| |||| | |||||||    
T  2536 ccctgatcatcaaccttgaagtcactatcttcagt 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 70 - 235
Target Start/End: Complemental strand, 368 - 203
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  | ||||||||||| ||||||||  |||||| ||||||  | ||| |||||||| |||| ||||||||||||||||||    
T  368 cggatgaatacttaagctacttctatgactttcttctaaaatcaactttttcaactcatcactatcaagaatgcaagttcttcctctgaacctcaacaca 269  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaac 235  Q
    || || ||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||    
T  268 ccttgatcatcaaccttgaaatcaccctcttcagtttgattactagcaaccattaaatccacaaac 203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 32411 - 32580
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||  ||||||  ||||| || ||||||||||||||||| ||||||||||||||||||    
T  32411 cggatgaatacttaagctactcttgtgactttcctccagaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 32510  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||| | ||||||||| ||||| | ||| ||| ||||| ||||||||||    
T  32511 ccctgatcatcaaccttgaagtcactatcttcagtttcattaccagcaaccatcaaatcaacaaacttga 32580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 29058 - 29226
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  |||| |||||||||||||||||  |||||| ||||||  | ||||||||| ||||||| |||||||||||||||||||    
T  29058 ggatgaatacttaagctacttctgtggctttcttccaaaatcaactttttcaactcatcactatcaggaatgaaaattcttcctctgaacctcaacacac 29157  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || |||||||||||||| |||||| ||||||||| |||||||  || ||||||||||||| ||||||    
T  29158 cctgatcatcaaccttgaagtcaccatcttcagtttcattactagtaaccattaaatccacacacttga 29226  T

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Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 30863 - 30905
Alignment:
Q  17 atcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||| ||||||||||||||||||| || |||||||    
T  30863 atcaactttagacggatctactgcaataccactaccagaaata 30905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 50726 - 50770
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||||||||| ||||||||||| | || |||||||    
T  50726 acatcaactttagatggatcaactgcaatacctctaccagaaata 50770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 1276 - 1110
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| |||||||||||||||||||| ||||||||||||||||| ||    
T  1276 gatgaatacttaagctacttctgtgactttcttctaaaatcaacattttcaactcatcattgtcaggaatgcaaattcttcctctgaacctcaacactcc 1177  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
     || ||||||||||||||||||| | |||||| |  ||||||| ||| ||||||||| ||||||||||    
T  1176 ttgatcatcaaccttgaaatcactatcttcag-tccattactagcaaccattaaatcaacaaacttga 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 34188 - 34278
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaac 160  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  34188 cggatggatactcaagctgctcttgtgactttcttccaaaatcaacctttttatctcatcgttgtcaggaatgcaaattctgcctctgaac 34278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 5431 - 5599
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||  ||||  |||||||||||||| |  |||||| ||||||  | ||||||||||||||||| |||||||||||||||||||    
T  5431 ggatgaatacttaagctacttctgtgtatttcttccaaaatcgactttttcaactcatcactatcaggaatgcaaattcttcctctgaacctcaacacac 5530  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || |||||||||||||| |||||| ||||||||| |||||||  || ||||||||||||| ||||||    
T  5531 cctgatcatcaaccttgaagtcaccatcttcagtttcattactagtaaccattaaatccacacacttga 5599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 77; Significance: 7e-36; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 13207 - 13083
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| |||||||||||||||||||| |||||||| ||||| |||    
T  13207 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatgcaaattcttcctctgaatctcaataca 13108  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  13107 ccctgatcatcaaccttgaagtcac 13083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 68370 - 68537
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||| ||||||| ||||||||||| ||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  68370 cggatgaatactcaagttactcttatgactttcttctaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacaca 68469  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || |||||||||||||||||||| | | | |||| ||||||||||  || ||||||||||||||||||    
T  68470 ccttgttcatcaaccttgaaatctctatcctcagcttgattactagtaaccattaaatccacaaactt 68537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 4252 - 4092
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||| |||||||||||||||||||| || ||||| || ||||| |  ||||| || |||||||| |||||||| |||||||||||||||||||| || |    
T  4252 atacttaagctactcttgtgactttcctctaaaattaaccttttgaaatcatcattatcaggaatacaaattcttcctctgaacctcaacacaccctgat 4153  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    |||| ||||| || |||| | | |||||   ||||| | ||| ||||||||| ||||||||    
T  4152 catccaccttaaactcactatcctcagtgccattaccagcaaccattaaatcaacaaactt 4092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 4776 - 4945
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  |||| |||||||| ||||||||  || |||  ||||| || | ||||||||||||||| ||||||||||||||||||    
T  4776 cggatgaatacttaagctacttctgtggctttcttctaaaatcaactttatcaaatcatcattattaggaatgcaaattcttcctctgaacctcaacaca 4875  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||||  |||| |||||||||||| ||| ||||||||| ||||||||||    
T  4876 ccctgatcatcaaccttgaagtcaccctcttcggtttgattactagcaaccattaaatcaacaaacttga 4945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 5750 - 5919
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||  ||||||  ||||| || |||||||| |||||||| |||||||||||||||| |    
T  5750 cggatgaatacttaagctactcttgtgactttcttccagaatcaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacata 5849  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||||||||||||| |||| | ||||| ||| ||||| | ||| ||| ||||| ||||||||||    
T  5850 ccctgatcatcaaccttgaagtcactatcttcaatttcattaccagcaaccatcaaatcaacaaacttga 5919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 3791 - 3960
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||||||||||||||||||| ||| ||  |||||| |||||| || || |||||||||||||| ||||||||||||||||||    
T  3791 cggatgaatacttaagctactcttgtgactttcttccagaataaactttttcaactcatcattatctggaatgcaaattctccctctgaacctcaacaca 3890  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || ||  ||||||||||||| ||||   ||||||||| ||||| | ||| ||| ||||| ||||||||||    
T  3891 ccctgaacatcaaccttgaagtcactctcttcagtttcattaccagcaaccatcaaatcaacaaacttga 3960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 8291 - 8332
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  8291 tcaactttagatggatctactgcaataccactactagaaata 8332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 2791 - 2622
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  |||||| |||||| || |||||||||||||||||  ||| |||||||||||||    
T  2791 cggatgaatacttaagctactcttgtgactttcctctaaaatcaaatttttcaactcatcattatcaggaatgcaaattctttctccgaacctcaacaca 2692  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || |  |||||||||||||| |||| | ||||||||| ||||| | ||| ||| ||||| ||||||||||    
T  2691 ccctcatcatcaaccttgaagtcactatcttcagtttcattaccagcaaccatcaaatcaacaaacttga 2622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 2159 - 1991
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| |||||||||||||||||||  || ||||||||  ||||||  ||||| || |||||||| |||||||| |||| ||||||||||||||    
T  2159 ggatgaatacttaagctactcttgtgacttttctctaaaatcaactttttcaaatcatcattatcaggaatacaaattcttcctcggaacctcaacacac 2060  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || |||| ||||||||| |||| | ||||||||| ||||||| ||||||| ||||| ||||||||||    
T  2059 cctgatcattaaccttgaagtcactatcttcagtttcattactagcaatcatcaaatcaacaaacttga 1991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 2660 - 2494
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| ||||| || ||||||||||| |||||||    
T  2660 ggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcttcattgtcaggaatacaaatccttcctctgaaccttaacacac 2561  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    | || ||||| |||||||| |||| | | || |||| ||||| ||||| ||||||||| ||||||||    
T  2560 cctgatcatcgaccttgaagtcactatcctctgtttcattaccaacaaccattaaatcaacaaactt 2494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 194
Target Start/End: Original strand, 8062 - 8184
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||||||||||||||||||||| || || ||||| ||  ||||||   |||| |  ||||||||| ||||||| ||||| ||||||||||||||    
T  8062 gatgaatactcaagctactcttgtgactctcctctaaaattaactttttcaaaccatcatcatcaggaatgaaaattcttcctctaaacctcaacacacc 8161  T
Q  172 gtgttcatcaaccttgaaatcac 194  Q
     || |||||||||||||| ||||    
T  8162 ctgatcatcaaccttgaagtcac 8184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 448 - 286
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||| ||||||||  ||||||||||||| ||||||||  |||||| ||||||  | ||||||||||||||||| |||||||||||||||||||| |  |    
T  448 atacttaagctacttctgtgactttcttcgaaaatcaactttttcaactcatcactatcaggaatgcaaattcttcctctgaacctcaacacaccctaat 349  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | ||||||||||| |||| | ||||||||| |||||||  || ||||||||||||| ||||||    
T  348 cgtcaaccttgaagtcacgatcttcagtttcattactagtaaccattaaatccacacacttga 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 28219 - 28318
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || | || ||| |||||||| |||| |||||||||||||||    
T  28219 gatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattattagaaatacaaattcttcctccgaacctcaacacacc 28318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 34472 - 34571
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || | || ||| |||||||| |||| |||||||||||||||    
T  34472 gatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattattagaaatacaaattcttcctccgaacctcaacacacc 34571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 883 - 1052
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||| | ||||| ||||||||||| ||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  883 cggatgaatactcaagttgctcttatgactttcttctaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacaca 982  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || |||||||||||||||||||||| |   |||| ||||||||||  || ||| ||||||||||||||||    
T  983 ccttgttcatcaaccttgaaatcactattctcagcttgattactagtaaccataaaatccacaaacttga 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 69; Significance: 4e-31; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 51486 - 51362
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| ||||||||  |||||||||||||||||    
T  51486 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcgtcattgtcaggaatacaaattctatctctgaacctcaacaca 51387  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  51386 ccctgatcatcaaccttgaagtcac 51362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 60520 - 60396
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| ||||||||  |||||||||||||||||    
T  60520 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcgtcattgtcaggaatacaaattctatctctgaacctcaacaca 60421  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  60420 ccctgatcatcaaccttgaagtcac 60396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 66908 - 66784
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| ||||||||  |||||||||||||||||    
T  66908 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcgtcattgtcaggaatacaaattctatctctgaacctcaacaca 66809  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  66808 ccctgatcatcaaccttgaagtcac 66784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 26400 - 26494
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctca 164  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  |||||||| |||||||| |||||||| ||||| |||||||    
T  26400 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcgttatcaggaatacaaattcttcctctaaacctca 26494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 4e-31; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 24098971 - 24098811
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||| | |||| ||||||||||| |||||||| |||||||||||||| ||||| || |    
T  24098971 atactcaagctactcttgtgactttcttctaaaatcaactttttcaacccatcattgtcaggaatacaaattcttcctctgaacctcaaaacaccctgat 24098872  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    | ||||||||||| |||| | | ||||| | ||||| |  |||||| ||||| ||||||||    
T  24098871 cgtcaaccttgaagtcactatcctcagtgtcattaccagtaatcatcaaatcaacaaactt 24098811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 23197608 - 23197454
Alignment:
Q  83 aagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaa 182  Q
    ||||||||||||| |||||| || ||||||||  ||||||  ||||| || |||||||| |||||||| |||||||||||||||||||| || |||||||    
T  23197608 aagctactcttgtcactttcctctaaaatcaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacacaccctgatcatcaa 23197509  T
Q  183 ccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    | || || |||| | ||||||||| | ||| | ||| ||| ||||||||||||||    
T  23197508 ctttaaagtcactatcttcagtttcactaccagcaaccatcaaatccacaaactt 23197454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 20856135 - 20856011
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||| | ||||| ||||||||||| ||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  20856135 cggatgaatactcaagttgctcttatgactttcttctaaaatcaacttcttcaattcctcattgtcaggaatacaaattctgcctcttaatctcaacaca 20856036  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||||||||    
T  20856035 ccttgctcatcaaccttgaaatcac 20856011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 20939438 - 20939314
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||  |||| |  ||||| |  ||||||||||||||||| | |||||| |||||||||    
T  20939438 cggatgaatactcaagctactcttgtgactttcttctaaaattaacttttttaaatcatcatcatcaggaatgcaaattcttcttctgaatctcaacaca 20939339  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  20939338 ccttgatcatcaaccttgaagtcac 20939314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 19662505 - 19662396
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||| |||||||||||||||||||| || ||||||||  |||||| ||| || || |||||||| |||||||| |||||||||||||| ||||| || |    
T  19662505 atacttaagctactcttgtgactttcctctaaaatcaactttttcaactcgtcattatcaggaatacaaattcttcctctgaacctcaatacaccctgat 19662406  T
Q  177 catcaacctt 186  Q
    ||||||||||    
T  19662405 catcaacctt 19662396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 20295403 - 20295520
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  20295403 atactcaacctactcttgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgat 20295502  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  20295503 catcaaccttaaaatcac 20295520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 19855291 - 19855405
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| |||||| ||||||||||||| || ||||||||  |||||| ||| || || |||||||| ||||| || |||||||||||||| |||||    
T  19855291 gatgaatacttaagctattcttgtgactttcctctaaaatcaactttttcaactcgtcattatcaggaatacaaatccttcctctgaacctcaatacacc 19855390  T
Q  172 gtgttcatcaacctt 186  Q
     || |||||||||||    
T  19855391 ctgatcatcaacctt 19855405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 20835208 - 20835108
Alignment:
Q  137 ggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaact 236  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||| | | |||||   ||||| | ||| ||||||||| |||||||    
T  20835208 ggaatgcaaattcttcctctgaacctcaacacaccctgatcatcaaccttaaaatcactatcctcagtgccattaccagcaaccattaaatcaacaaact 20835109  T
Q  237 t 237  Q
    |    
T  20835108 t 20835108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 204
Target Start/End: Complemental strand, 19760247 - 19760114
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttt-tcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||||||||||||||||||  ||||||| ||||| | ||||| ||||| |||||||||||| ||||||||| |||||||| |||| ||| | ||||||     
T  19760247 ggatggatactcaagctacttatgtgactctcttcaagaatca-tctttctcatctcatcgtcgtcaggaatacaaattctacctcggaatcgcaacact 19760149  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagt 204  Q
    || || ||||| ||||| || |||| | |||||||    
T  19760148 ccctgatcatcgaccttaaagtcactatcttcagt 19760114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 31539365 - 31539248
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || |||| ||||||  | |||| ||| || ||||||||||| |||| ||| ||| ||||||||| |||||| || |    
T  31539365 atactcaacctactcttgtgactctcctccagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctgtgaacctcagcacaccctgat 31539266  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||  ||||||||||    
T  31539265 catcaattttgaaatcac 31539248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 37678071 - 37678188
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  37678071 atactcaaactactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagtacaccctgat 37678170  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  37678171 catcaactttgaaatcac 37678188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 180
Target Start/End: Complemental strand, 50619619 - 50619509
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||| || ||||| ||||| | ||||| | | ||||||||||| ||||  ||||| |||||||| ||||  ||||||||||||    
T  50619619 cggatgaatactcaagctacttttatgactctcttcaagaatcattttcttcatctcatcattgtatggaatacaaattctacctcgaaacctcaacaca 50619520  T
Q  170 ccgtgttcatc 180  Q
    || || |||||    
T  50619519 ccttgatcatc 50619509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 22110013 - 22110150
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||| ||||  | ||||| ||||| | ||||| | | ||||||||||| | ||| ||||| ||||||||||||| ||| |||||||| || || |    
T  22110013 atactcaagttacttctatgactctcttcaagaatcattttcttcatctcatcatcgtctggaatacaaattctgcctcggaatctcaacactccttggt 22110112  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||| | ||| ||||||| | ||||||| |||||||||    
T  22110113 catcgatcttaaaatcactatcttcagtctgattacta 22110150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 22113862 - 22113999
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||| ||||  | ||||| ||||| | ||||| | | ||||||||||| | ||| ||||| ||||||||||||| ||| |||||||| || || |    
T  22113862 atactcaagttacttctatgactctcttcaagaatcattttcttcatctcatcatcgtctggaatacaaattctgcctcggaatctcaacactccttggt 22113961  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||| | ||| ||||||| | ||||||| |||||||||    
T  22113962 catcgatcttaaaatcactatcttcagtctgattacta 22113999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 16373513 - 16373680
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | ||| ||||| |||||||| ||||  || ||||||||    
T  16373513 cggatgaatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtctggaatacaaattctacctcgaaatctcaacac 16373611  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||| || ||||| ||||| || ||||   ||||||| ||||||||| ||| ||  || |||||||||||    
T  16373612 accttgatcatcgaccttaaagtcactgtcttcagtctgattactagcaaccaacaagtccacaaactt 16373680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 20139982 - 20140027
Alignment:
Q  14 gacatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||    
T  20139982 gacatcaactttagacggatctactgcaataccactacgagaaata 20140027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 21025221 - 21025326
Alignment:
Q  134 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaa 233  Q
    |||||||| ||||||| ||||| ||| ||||||||||| || ||||  ||||| || |||||| ||||||| ||||||||| ||| ||  || || ||||    
T  21025221 tcaggaatacaaattcggcctcggaatctcaacacaccatggtcattgaccttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaa 21025320  T
Q  234 acttga 239  Q
    ||||||    
T  21025321 acttga 21025326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 19107352 - 19107462
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||| |||| || ||||| | ||||| |||| || ||||| || ||||| ||||| |||||||| |||| ||| ||||||||    
T  19107352 cggatgaatactcaagctactcctgtggctctcttcaagaatca-tcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaacac 19107450  T
Q  169 accgtgttcatc 180  Q
    ||| || |||||    
T  19107451 accttgatcatc 19107462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 22116814 - 22116857
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||||||| |||||||||||||| || |||||||    
T  22116814 catcaactttagatggatttactgcaataccactaccagaaata 22116857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 50618856 - 50618813
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||| ||||||||||||||||||| || |||||||    
T  50618856 catcaactttagagggatctactgcaataccactaccagaaata 50618813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 21951900 - 21952017
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| |  |||||  | ||||  ||||| |||| |||||| |||| ||| |||||||| ||||  ||||| || |    
T  21951900 atactcaacctactcttgtgactctcttcaaggatcaacttcttcaaatcatcattgttaggaatacaaactcttcctctgaatctcagtacaccctgat 21951999  T
Q  177 catcaaccttgaaatcac 194  Q
    |||| ||||| |||||||    
T  21952000 catccaccttaaaatcac 21952017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 51331949 - 51331908
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||| |||||||||||| |||||||||||    
T  51331949 tcaactttagacggatccactgcaataccatcactagaaata 51331908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Complemental strand, 20835263 - 20835231
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttc 102  Q
    |||||| ||||||||||||||||||||||||||    
T  20835263 cggatgaatactcaagctactcttgtgactttc 20835231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 20938522 - 20938478
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| |||||||| ||||||||||||| || |||||||    
T  20938522 acatcaactttcgatggatcaactgcaataccactaccagaaata 20938478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 11363 - 11196
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||| ||||| |||||||||||  ||||||  ||||| || ||||||||||||||||| ||| |||| |||||||||    
T  11363 cggatgaatacttaagctactcttgtggctttcctccaaaatcaactttttcacatcatcattatcaggaatgcaaattcttcctttgaatctcaacaca 11264  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||||||||| || |||| | ||||||||| ||||| | ||| ||| ||||| ||||||||    
T  11263 ccttgatcatcaaccttaaagtcactatcttcagtttcattaccagcaaccatcaaatcaacaaactt 11196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 15133 - 14966
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||| ||||| |||||||||||  ||||||  ||||| || ||||||||||||||||| ||| |||| |||||||||    
T  15133 cggatgaatacttaagctactcttgtggctttcctccaaaatcaactttttcacatcatcattatcaggaatgcaaattcttcctttgaatctcaacaca 15034  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||||||||| || |||| | ||||||||| ||||| | ||| ||| ||||| ||||||||    
T  15033 ccttgatcatcaaccttaaagtcactatcttcagtttcattaccagcaaccatcaaatcaacaaactt 14966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 20983 - 21152
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || |||||||| ||||| || ||| ||||| |||| | |    
T  20983 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatacaaatccttcctgtgaacttcaatata 21082  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || |||| ||||||||| |||| | ||||| ||| ||||| | ||| ||| ||||| ||||||||||    
T  21083 ccctgatcattaaccttgaagtcactatcttcaatttcattaccagcaaccatcaaatcaacaaacttga 21152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 71 - 237
Target Start/End: Complemental strand, 46704 - 46538
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||  ||||||  ||||| || |||||||| || ||||| |||||||||||||||||||    
T  46704 ggatgaatactcaagctactcttgtgactttcttctaaaattaactttttcaaatcatcattatcaggaatacagattcttcctctgaacctcaacacac 46605  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    | || ||||||||||| || |||| | | |||| || ||||||| ||| ||| ||||| ||||||||    
T  46604 cctgatcatcaaccttaaagtcactatcctcagcttcattactagcaaccatcaaatcaacaaactt 46538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 41632 - 41515
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  41632 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 41533  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||| ||||||||||    
T  41532 catcaactttgaaatcac 41515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 3831 - 3874
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  3831 catcaactttagatggatctactgcaataccactaccagaaata 3874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 214
Target Start/End: Original strand, 2921 - 3058
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| |  | |||||| ||||||||||||| ||| |||||||| || || |    
T  2921 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcattaggaatacaaattctgcctcagaatctcaacaccccctgat 3020  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||| |  || ||||||| | ||||||| |||||||||    
T  3021 catcgattttaaaatcactatcttcagtctgattacta 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 149570 - 149739
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||  ||||||  ||||| || ||||||||||||||| | ||||||||||||||||||    
T  149570 cggatgaatacttaagctactcttgtgactttcctccagaatcaactttttcaaatcatcattatcaggaatgcaaatttttcctctgaacctcaacaca 149669  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    || || ||||||||||| || ||||   | ||||||| ||||| | ||| ||| || |||||||||||||    
T  149670 ccctgatcatcaaccttaaagtcactttcctcagtttcattaccagcaaccatcaagtccacaaacttga 149739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 195010 - 194843
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||  ||||| |  ||||||||||||||||| |||||||| |||||||||    
T  195010 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaatcatcatcatcaggaatgcaaattcttcctctgaatctcaacaca 194911  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| |||| | | |||||   ||||| ||||| ||||||||| ||||||||    
T  194910 ccctgatcatcaaccttgaagtcactatcctcagtgccattaccaacaaccattaaatcaacaaactt 194843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 24918 - 24879
Alignment:
Q  20 aactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  24918 aactttagatggatctactgcaataccactactagaaata 24879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 25832 - 25672
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| ||||||||||| |||||||| ||||  || | |||||| || |  |    
T  25832 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcattgtcaggaatacaaattctccctcgaaaacgcaacactccctaat 25733  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    |||| |  || ||||| | | ||||||| ||||||||| ||||||  || |||||||||||    
T  25732 catcgattttaaaatcgctatcttcagtctgattactagcaatcaacaagtccacaaactt 25672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 1 - 117
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || ||||||||||||||||| ||||||||||||||||||    
T  1 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 100  T
Q  170 ccgtgttcatcaacctt 186  Q
    || || |||||||||||    
T  101 ccctgatcatcaacctt 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 10793 - 10960
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| | ||||||  ||||||||||||| | ||||||  ||||||  ||||| || ||| |||||||||| || ||||||||||||||||||    
T  10793 cggatgaatacttaggctacttctgtgactttcttctagaatcaactttttcaaatcatcattatcaagaatgcaaatccttcctctgaacctcaacaca 10892  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| ||||||  |||||||| ||| ||| ||| ||||||||| ||||||||    
T  10893 ccctgatcatcaaccttgaagtcaccattttcagtttcattgctagcaaccattaaatcaacaaactt 10960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 16560 - 16601
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  16560 tcaactttagacggatctactgcaataccactaccagaaata 16601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 14503 - 14340
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||| | ||||||||||| || ||||||||  ||||||  ||||| || |||||||| ||||| || ||||||||||||||||||    
T  14503 cggatgaatacttaagctagttttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatacaaatccttcctctgaacctcaacaca 14404  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaa 233  Q
    || || |||||||||||||| |||| | ||||||||| ||||||| ||| ||| ||||| ||||    
T  14403 ccctgatcatcaaccttgaagtcactatcttcagtttcattactagcaaccatcaaatcaacaa 14340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 22682 - 22519
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||| | ||||||||||| || ||||||||  ||||||  ||||| || |||||||| ||||| || ||||||||||||||||||    
T  22682 cggatgaatacttaagctagttttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatacaaatccttcctctgaacctcaacaca 22583  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaa 233  Q
    || || |||||||||||||| |||| | ||||||||| ||||||| ||| ||| ||||| ||||    
T  22582 ccctgatcatcaaccttgaagtcactatcttcagtttcattactagcaaccatcaaatcaacaa 22519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 3752 - 3867
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || ||||||||||||||||| |||||||||||||||||||    
T  3752 ggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacacac 3851  T
Q  171 cgtgttcatcaacctt 186  Q
    | || |||||||||||    
T  3852 cctgatcatcaacctt 3867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 985 - 823
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||| |||||||||||||||||||||| | ||||||  ||| || ||||||  | ||||||||||||||||| |||||||||||||||||||| || |    
T  985 atactctagctactcttgtgactttcttctagaatcaacttttccaactcatcactatcaggaatgcaaattcttcctctgaacctcaacacaccctgat 886  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||||| ||||| |||  | |||| |||| |||| || ||| ||| ||||| ||||||||||    
T  885 catcaactttgaagtcaatatcttccgtttcattattagcaaccatcaaatcaacaaacttga 823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 20121 - 20239
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| ||||| ||||    
T  20121 ggatgaatactcaagctactcttgtgactctcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaatacac 20220  T
Q  171 cgtgttcatcaaccttgaa 189  Q
    | || |||||||| |||||    
T  20221 cctgatcatcaactttgaa 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 249620 - 249737
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||||| ||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||||||||  ||||| || |    
T  249620 atactcaaactactcttgtgacttttttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaacctcagaacaccctgat 249719  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||||||||| ||||    
T  249720 catcaaccttgaagtcac 249737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 540 - 372
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaa-tcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||| | ||||| ||||||||||| |||| ||||  | ||||  || || ||||||||||| |||||||||||||| || ||||||||    
T  540 cggatgaatactcaagttgctcttatgactttcttctaaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacac 441  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||| |||||||||||||||||||||| |   || | ||||||||||  || ||||||||||||||||||    
T  440 accttgttcatcaaccttgaaatcactattctccgcttgattactagtaaccattaaatccacaaactt 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 28225 - 28341
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||  |||||| |||||| || |||||||| |||||||| ||||||||||| ||||||    
T  28225 cggatgaatacttaagctactcttgtgactttcctccagaatcaactttttcaactcatcattatcaggaatacaaattcttcctctgaaccttaacaca 28324  T
Q  170 ccgtgttcatcaacctt 186  Q
    || || |||||||||||    
T  28325 ccctgatcatcaacctt 28341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 323704 - 323828
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||  ||||||  ||||| |  ||| ||||||||||||| |||||||| |||||||||    
T  323704 cggatgaatactcaagctactcttgtgactttcctccaaaattaactttttcaaatcatcatcatcaagaatgcaaattcttcctctgaatctcaacaca 323803  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  323804 ccctgatcatcaaccttgaagtcac 323828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 210
Target Start/End: Complemental strand, 202772 - 202634
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| ||||||||  ||||||||||||| ||||||||  |||| | |||||| || |||||||| |||||||| || | ||| |||||||||||    
T  202772 gatgaatacttaagctacttctgtgactttcttctaaaatcaacttttttaactcatcattatcaggaatacaaattctaccgcggaatctcaacacacc 202673  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgatt 210  Q
     || |||||||||||||| |||||| |||||||||||||    
T  202672 ttgatcatcaaccttgaagtcaccatcttcagtttgatt 202634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 324 - 491
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || || ||||||||  ||||||| |||||||| ||||| |||    
T  324 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcttcattttcaggaatataaattctacctctgaatctcaataca 423  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || |||||||||||||| |||| | | || |||| |||||   ||| ||||||||| ||||||||    
T  424 ccctggtcatcaaccttgaagtcactatcctctgtttcattacccgcaaccattaaatcaacaaactt 491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 51167 - 51025
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| ||| ||||  ||||||||||||| ||||||||  ||||||  |||||  | ||||||||||||||||| ||||||||||||||||||||    
T  51167 gatgaatacttaagttacttctgtgactttcttctaaaatcaactttttcaaatcatcactatcaggaatgcaaattcttcctctgaacctcaacacacc 51068  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
     || |||||||||||||| |||| | || |||||| |||||||    
T  51067 ctgatcatcaaccttgaagtcactatctccagtttcattacta 51025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 10112 - 9947
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || |||| ||| |||||||| |||| ||| |||||||||||    
T  10112 gatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcagaaatacaaattcttcctcggaatctcaacacacc 10013  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
      | |||||||||||||| |||| | ||| |||| |||||||| ||| ||  ||||||||||||||    
T  10012 cagatcatcaaccttgaagtcactatctttagttggattactaccaaccaacaaatccacaaactt 9947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 186
Target Start/End: Original strand, 2588 - 2704
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||| | |||||||||||||||||||| || ||||||||| ||||||  ||||| || ||||||||||||||||| ||||||||||| ||||||    
T  2588 cggatgaataattaagctactcttgtgactttcctctaaaatcaattttttcaaatcatcattatcaggaatgcaaattcttcctctgaaccttaacaca 2687  T
Q  170 ccgtgttcatcaacctt 186  Q
    || |  |||||||||||    
T  2688 ccctaatcatcaacctt 2704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 3505 - 3409
Alignment:
Q  143 caaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||||||| |||||||||||||||||||| || |||||||||||||  ||| || ||||||||||||||||| ||| ||| ||||||||||||||||    
T  3505 caaattcttcctctgaacctcaacacaccctgatcatcaaccttgatgtcaacatcttcagtttgattactagcaaccatcaaatccacaaacttga 3409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 6544 - 6420
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  ||||| |  ||||||||||||||||| ||||| || |||||||||    
T  6544 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaaatcatcatcatcaggaatgcaaattcttcctctaaatctcaacaca 6445  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  6444 ccctgatcatcaaccttgaagtcac 6420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 30518 - 30422
Alignment:
Q  143 caaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||||||| |||||||||||||||||||| || |||||||||||||  ||| || ||||||||||||||||| ||| ||| ||||||||||||||||    
T  30518 caaattcttcctctgaacctcaacacaccctgatcatcaaccttgatgtcaacatcttcagtttgattactagcaaccatcaaatccacaaacttga 30422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 41917 - 42041
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  |||||| ||| || || | |||||| |||||||| |||||| |||||||||||    
T  41917 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaactcgtcattattaggaatacaaattcttcctctggacctcaacaca 42016  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  42017 ccctgatcatcaaccttgaagtcac 42041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 20900 - 21024
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||  ||||||  || || |||| |||||| |||||||| |||||||| ||||| |||    
T  20900 cggatgaatactcatgctactcttgtgactttcttctaaaatcaactttttcaattcttcattgtaaggaatacaaattctacctctgaatctcaataca 20999  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  21000 ccctgatcatcaaccttgaagtcac 21024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 45517 - 45641
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || |||||| || | |||||||| | |||||| ||||| |||    
T  45517 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcttcattgtcaagattacaaattctacatctgaatctcaataca 45616  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  45617 ccctgatcatcaaccttgaagtcac 45641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 20747 - 20631
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||||||||||||| ||| ||||||||  ||||||  ||||| |  ||||||||||||||||| |||||||| |||||||||    
T  20747 cggatgaatacttaagctactcttgtgacttttttctaaaatcaactttttcaaatcatcatcatcaggaatgcaaattcttcctctgaatctcaacaca 20648  T
Q  170 ccgtgttcatcaacctt 186  Q
    || || |||||||||||    
T  20647 ccatgatcatcaacctt 20631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 43790 - 43950
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||| ||  | |||| |||||| ||||||||||| |||||||| |||||||||||||| ||||| || |    
T  43790 atactcaaactactcttgtgactctcttctagaattaacttcttcaactcatcattgtcaggaatacaaattcttcctctgaacctcaaaacaccctgat 43889  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||||||||||| |||| | | ||||| | ||||| | || |||| ||||| ||||||||    
T  43890 catcaaccttgaagtcactatcctcagtgtcattaccagcagtcatcaaatcaacaaactt 43950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 13200 - 13367
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||| || ||||| |  ||||| || |||||||| |||||||| ||||||||||||||||||    
T  13200 cggatgaatacttaagctactcttgtgactttcctctaaaattaaccttttgaaatcatcattatcaggaatacaaattcttcctctgaacctcaacaca 13299  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||| ||||| || |||| | | |||||   ||||| | ||| ||||||||| ||||||||    
T  13300 ccctgatcatccaccttaaactcactatcctcagtgccattaccagcaaccattaaatcaacaaactt 13367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 4758 - 4639
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| |||    
T  4758 cggatgaatactcaagctactcttatgactttcttctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaataca 4659  T
Q  170 ccgtgttcatcaaccttgaa 189  Q
    || |  ||||||||||||||    
T  4658 ccctaatcatcaaccttgaa 4639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 237
Target Start/End: Original strand, 11734 - 11900
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    ||||| ||||| ||||||||||| ||||||||||| || |||||  ||||||  || || ||||||||||| |||||||| ||| |||| ||||| ||||    
T  11734 ggatgaatacttaagctactcttatgactttcttctaagatcaactttttcaattcttcattgtcaggaatacaaattctacctatgaatctcaatacac 11833  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    | || |||||||||||||| |||| | | || |||| ||||| | ||| ||||||||| ||||||||    
T  11834 cctgatcatcaaccttgaagtcactatcctctgtttcattaccagcaaccattaaatcaacaaactt 11900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 228
Target Start/End: Complemental strand, 48512 - 48354
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||| |||||||| || ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| |||    
T  48512 cggatgaatactcaagctactcttatgactttcctctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaataca 48413  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatc 228  Q
    || || ||||||||||| || |||| | | || |||| ||||| | ||||||| |||||    
T  48412 ccctgatcatcaaccttaaagtcactatcctctgtttcattaccagcaatcatcaaatc 48354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 171
Target Start/End: Complemental strand, 100848 - 100754
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    ||||| ||||||||||||||||||||||| ||||||||  |||||| |||||| |||| |||||| |||||||| |||||||| |||||||||||    
T  100848 atacttaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgttaggaatacaaattcttcctctgaatctcaacacacc 100754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 211
Target Start/End: Original strand, 181199 - 181340
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || | ||||||||| ||||||| ||||| |||  ||||||||    
T  181199 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcgtcaggaatacaaattcggcctcggaatttcaacaca 181298  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgatta 211  Q
    || || ||||| ||||| || |||||| ||||||| ||||||    
T  181299 ccatggtcatcgaccttaaagtcaccatcttcagtctgatta 181340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 237
Target Start/End: Complemental strand, 13603 - 13438
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||| |||||||||||||||||||| || | ||| ||  ||||||  ||||| |  ||| ||||||||||||| |||||||| |||||||||||    
T  13603 gatgaatacttaagctactcttgtgactttcctctagaattaactttttcaaatcatcatcatcaagaatgcaaattcttcctctgaatctcaacacacc 13504  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     | ||||||||||||||| |||| | | |||||   ||||||| ||| ||||||||| ||||||||    
T  13503 cttttcatcaaccttgaagtcactatcctcagtgccattactagcaaccattaaatcaacaaactt 13438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 12092 - 11968
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||     
T  12092 cggatgaatactcaagctactcttgtgactttcatctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatact 11993  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  11992 ccctgatcatcaaccttgaagtcac 11968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 5642 - 5518
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||     
T  5642 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatact 5543  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || |  |||||||| ||||| ||||    
T  5542 ccctaatcatcaactttgaagtcac 5518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 6315 - 6229
Alignment:
Q  152 cctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttg 238  Q
    ||||||||||| |||||||| || |||||||| ||||| |||||| |||||||||||||||||  || |||||||||||||||||||    
T  6315 cctctgaaccttaacacaccttgatcatcaactttgaagtcaccatcttcagtttgattactagtaaccattaaatccacaaacttg 6229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 6213 - 6337
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| ||||||||  ||||||| ||||| ||     
T  6213 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaatacaaattctatctctgaatctcaatact 6312  T
Q  170 ccgtgttcatcaaccttgaaatcac 194  Q
    || || |||||||||||||| ||||    
T  6313 ccctgatcatcaaccttgaagtcac 6337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 186
Target Start/End: Complemental strand, 857 - 742
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||| ||||||||||| || ||||||||  |||||| ||| || || |||||||| |||||||| |||||||||||||| |||    
T  857 cggatgaatacttaagctacttttgtgactttcctctaaaatcaactttttcaactc-tcattatcaggaatacaaattcttcctctgaacctcaataca 759  T
Q  170 ccgtgttcatcaacctt 186  Q
    || || |||||||||||    
T  758 ccttgatcatcaacctt 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 237
Target Start/End: Original strand, 13065 - 13225
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||| ||||  | ||||| ||||| | ||||| | | ||||||||||| ||||| ||||| ||||| || ||||  || ||||||||||| || |    
T  13065 atactcaagttacttctatgactctcttcaagaatcattttcttcatctcatcattgtctggaatacaaatcctacctcgaaatctcaacacaccttgat 13164  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    |||| | ||| |||||||   ||||||| ||||||||| ||| ||  || |||||||||||    
T  13165 catcgatcttaaaatcactgtcttcagtctgattactagcaaccaacaagtccacaaactt 13225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 10763 - 10596
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||   |||| |  | ||||||||||||||| ||||||||||||| ||||    
T  10763 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaaccatcatcattaggaatgcaaattctccctctgaacctcagcaca 10664  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||||||||| || |||| | | ||||| | ||||| || || ||| ||||| ||||||||    
T  10663 ccctgatcatcaaccttaaagtcactatcctcagtgtcattaccaataaccatcaaatcaacaaactt 10596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 20977 - 20810
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||   |||| |  | ||||||||||||||| ||||||||||||| ||||    
T  20977 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaaccatcatcattaggaatgcaaattctccctctgaacctcagcaca 20878  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||||||||| || |||| | | ||||| | ||||| || || ||| ||||| ||||||||    
T  20877 ccctgatcatcaaccttaaagtcactatcctcagtgtcattaccaataaccatcaaatcaacaaactt 20810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 32618 - 32501
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||||||| |||||||||||||  ||||| || |    
T  32618 atactcaaactactcttgtgactctcttctagaatcaacttcttcaaatcatcattgtcaggaatacaaattcttcctctgaacctcattacaccctgat 32519  T
Q  177 catcaaccttgaaatcac 194  Q
    |||| |||||||| ||||    
T  32518 catctaccttgaagtcac 32501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 4652 - 4515
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||  ||||| | ||||| | | |||||||| || | |||||||||||||||||  |||| ||| ||||||||||| || |    
T  4652 atactcaagctacttctatgaccctcttcaagaatcattatcttcatctcttcatcgtcaggaatgcaaattcgacctcggaatctcaacacaccatggt 4553  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||||||||| || |||||| ||||||| |||||||||    
T  4552 catcaaccttaaagtcaccatcttcagtctgattacta 4515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 81131 - 81014
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| || || || |    
T  81131 atactcaaactactcttgtgactctcttcaagaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatactccctgat 81032  T
Q  177 catcaaccttgaaatcac 194  Q
    ||||||||||||| ||||    
T  81031 catcaaccttgaagtcac 81014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 230043 - 230187
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  | ||||||||||| | |||| ||||| ||||||||||| | ||| |||||  ||||||| |||| ||| ||||||||    
T  230043 cggatgaatactcaagctacttctatgactttcttcaagaatc-atcttcttcatctcatcatcgtctggaatataaattctacctcggaatctcaacac 230141  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    ||| || ||||| | ||| ||||||||| ||||||| |||||||||    
T  230142 accttgatcatcgatcttaaaatcaccatcttcagtctgattacta 230187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 218723 - 218626
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaaca 167  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| || |||||||| ||||||||||||| ||| |||||||    
T  218723 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcattatcaggaatacaaattctgcctcggaatctcaaca 218626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 1373 - 1229
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||| | ||||| ||||| || |||| | | ||||||||||| | ||||||||| |||||||| |||| ||| |||||||||    
T  1373 cggatgaatactcaagctactcctatgactctcttcaaatatcattttcttcatctcatcatcgtcaggaatacaaattctacctcggaatctcaacaca 1274  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || ||||| |  || |||||||   ||||||| |||||||||    
T  1273 ccttgatcatcgattttaaaatcactgtcttcagtctgattacta 1229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 44; Significance: 4e-16; HSPs: 4)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 5788 - 5831
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5788 catcaactttagatggatctactgcaataccaccactagaaata 5831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 12918 - 12961
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  12918 catcaactttagatggatctactgcaataccaccactagaaata 12961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 4871 - 5015
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | ||| ||||| ||||||||| ||| ||| ||||||||    
T  4871 cggatgaatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtctggaatacaaattctggctcggaatctcaacac 4969  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
     || || ||||| |  || || |||| | ||||||| |||||||||    
T  4970 tccttgatcatcgattttaaagtcactatcttcagtctgattacta 5015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 12001 - 12145
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | ||| ||||| ||||||||| ||| ||| ||||||||    
T  12001 cggatgaatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtctggaatacaaattctggctcggaatctcaacac 12099  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
     || || ||||| |  || || |||| | ||||||| |||||||||    
T  12100 tccttgatcatcgattttaaagtcactatcttcagtctgattacta 12145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 10501 - 10604
Alignment:
Q  134 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaa 233  Q
    ||||| || ||||||||||||| | | ||||||||||| |  |||||||||||||| |||||| ||||||||||||||||| ||| ||  || |||||||    
T  10501 tcagggatacaaattctgcctcggtatctcaacacaccttcatcatcaaccttgaagtcaccatcttcagtttgattactagcaaccaacaagtccacaa 10600  T
Q  234 actt 237  Q
    ||||    
T  10601 actt 10604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 16012 - 15895
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || || |||||||| |||| ||| ||||||||||||| |||||| || |    
T  16012 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattatcaggaatacaaactctacctctgaacctcagcacaccctgat 15913  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||||||| |||||||    
T  15912 catcaaccttaaaatcac 15895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 261308 - 261427
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||||||||||||| |||||| ||||| ||  ||||||  || || |||||| |||  |||||||| |||||||| ||||| ||     
T  261308 cggatgaatactcaagctactcttgtgaccttcttctaaaattaactttttcaattcttcattgtcaagaacacaaattctacctctgaatctcaatact 261407  T
Q  170 ccgtgttcatcaaccttgaa 189  Q
    || || ||||||||||||||    
T  261408 ccctgatcatcaaccttgaa 261427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 278129 - 277992
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| ||||||| ||||| ||| ||||||||||| || |    
T  278129 atactcaacctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcggcctcggaatctcaacacaccatggt 278030  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||| ||||| || |||||| ||||||| |||||||||    
T  278029 catcgaccttaaagtcaccatcttcagtctgattacta 277992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 7444 - 7327
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  7444 atactcaacctactcttgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagaacaccctgat 7345  T
Q  177 catcaaccttgaaatcac 194  Q
    ||| ||||||||| ||||    
T  7344 cataaaccttgaagtcac 7327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 32059 - 31915
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||||||||||||| ||||  | ||||| ||||| | ||||| |||| ||||||||||| | ||||||||| |||||||| |||| ||| ||||||||    
T  32059 cggatggatactcaagttacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtcaggaatacaaattctacctcggaatctcaacac 31961  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    ||| || ||||| |  || ||||||| | ||||||| |||||||||    
T  31960 accttgatcatcgattttaaaatcactatcttcagtctgattacta 31915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 210
Target Start/End: Complemental strand, 116211 - 116071
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| |||| ||||||||||| ||||||||||| |||||||||||||  || | ||||||    
T  116211 cggatgaatactcaagctacttctgtgactctcttcaagaatca-tcttcttcatctcatcattgtcaggaatacaaattctgcctcgaaatcgcaacac 116113  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgatt 210  Q
     || || ||||| ||||| || |||| | ||||||| |||||    
T  116112 tccctgatcatcgaccttaaagtcactatcttcagtctgatt 116071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 17283 - 17116
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||| |||| |||||||| ||||| | ||||| |||| ||||||||||| |  ||| |||| ||||||||||||| ||| | ||||||    
T  17283 cggatgaatactcaagttacttttgtgactctcttcaagaatca-tcttcttcatctcatcatcttcaagaatacaaattctgcctcagaatcgcaacac 17185  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
      | || |||||||||||||| |||  | ||||||| ||||||||| ||| ||  || |||||||||||    
T  17184 ctcctgatcatcaaccttgaagtcattatcttcagtctgattactagcaaccaacaagtccacaaactt 17116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 25171 - 25079
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacct 162  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||  ||||| || |||||||| |||||||| |||||||||||    
T  25171 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacct 25079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 20401 - 20513
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| || |||||||| |||||||| ||| |||||||||  ||||| || |    
T  20401 atactcaaactactcttgtgactctcttctagaatcaacttcttcaaatcatcattctcaggaatacaaattcttcctatgaacctcagaacaccctgat 20500  T
Q  177 catcaaccttgaa 189  Q
    |||||||||||||    
T  20501 catcaaccttgaa 20513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 23221 - 23333
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| || |||||||| |||||||| ||| |||||||||  ||||| || |    
T  23221 atactcaaactactcttgtgactctcttctagaatcaacttcttcaaatcatcattctcaggaatacaaattcttcctatgaacctcagaacaccctgat 23320  T
Q  177 catcaaccttgaa 189  Q
    |||||||||||||    
T  23321 catcaaccttgaa 23333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 40065 - 39921
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  ||||| | ||||| ||||||||  ||||||  ||||| || | |||||| |||||||| ||||  || ||||||||     
T  40065 cggatgaatacttaagctacttctgtgaatatcttctaaaatcaactttttcaattcatcattataaggaatacaaattcttcctcgaaatctcaacacg 39966  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || |||||||||||||| |||| | ||||||| |||||||||    
T  39965 ccttgatcatcaaccttgaagtcactatcttcagtctgattacta 39921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 4)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 11503 - 11336
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||||||||||||||||||  ||||||| ||||  | | ||| |||| ||||||||||| | ||| ||||| |||||||| |||| ||| ||||||||    
T  11503 cggatggatactcaagctacttctgtgactctctttaagagtca-tcttcttcatctcatcatcgtctggaatacaaattctacctcagaatctcaacac 11405  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     || || ||||| || ||||| |||| | |||||||  |||||||| ||| ||  ||||||||||||||    
T  11404 tccttgatcatcgactttgaagtcactatcttcagtcggattactagcaaccaacaaatccacaaactt 11336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 17695 - 17528
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||||||||||||||||||  ||||||| ||||  | | ||| |||| ||||||||||| | ||| ||||| |||||||| |||| ||| ||||||||    
T  17695 cggatggatactcaagctacttctgtgactctctttaagagtca-tcttcttcatctcatcatcgtctggaatacaaattctacctcagaatctcaacac 17597  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     || || ||||| || ||||| |||| | |||||||  |||||||| ||| ||  ||||||||||||||    
T  17596 tccttgatcatcgactttgaagtcactatcttcagtcggattactagcaaccaacaaatccacaaactt 17528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 11131 - 11087
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||| || ||||||| || |||||||    
T  11131 acatcaactttagatggatctaccgcgataccactaccagaaata 11087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 17323 - 17279
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||||||||||||| || ||||||| || |||||||    
T  17323 acatcaactttagatggatctaccgcgataccactaccagaaata 17279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 210
Target Start/End: Complemental strand, 14383 - 14245
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 170  Q
    |||| ||||||||||||||  ||||||| ||||| | ||||| |||| ||||||||||| | ||||||||| |||||||||||||  |||| |||||| |    
T  14383 gatgaatactcaagctacttctgtgactctcttcaagaatca-tcttcttcatctcatcatagtcaggaatacaaattctgcctcgaaaccgcaacactc 14285  T
Q  171 cgtgttcatcaaccttgaaatcaccaccttcagtttgatt 210  Q
    | || ||||| ||||| || |||| | ||||||| |||||    
T  14284 cctgatcatcgaccttaaagtcactatcttcagtctgatt 14245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 17681 - 17848
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||| ||||||||  | ||||| ||||| | ||||| | | ||||||||||| | ||||||||| ||||||||||||| ||| ||||||||     
T  17681 cggatgaatacttaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcgtcaggaatacaaattctgcctcagaatctcaacact 17780  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||| |  || ||||||  | ||||||| ||||||||| ||| ||  || |||||||||||    
T  17781 ccctgatcatcgattttaaaatcattatcttcagtctgattactagcaaccaacaagtccacaaactt 17848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 239
Target Start/End: Original strand, 66407 - 66574
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||||||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| |||||||||||    
T  66407 gatggatactcaagctacttctatgactctcttcaagaatcattttcttcatctctacatcgtcaggaatgcaaatccgacctcggaatctcaacacacc 66506  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||| |||||||| || || |||||  |||||||  |||||||| ||| ||  || || ||||||||||    
T  66507 gtgatcatcaactttaaagtcaccgtcttcagtccgattactagcaaccaacaagtctacaaacttga 66574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 214
Target Start/End: Complemental strand, 39119 - 38982
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||| | ||||| | ||||| | | |||||||| || | ||||||||| |||||||   ||| ||| ||||||||||| || |    
T  39119 atactcaagctacttctatgagtctcttcaagaatcattttcttcatctcttcatcgtcaggaatacaaattcgatctcggaatctcaacacaccatggt 39020  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||||| ||| || |||||| ||||||| |||||||||    
T  39019 catcaagcttaaagtcaccatcttcagtctgattacta 38982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 15877 - 16044
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| | | ||||||||||||| ||||||||| |||||| |  |||  || |||||||||    
T  15877 cggatgaatactcaagctacttctgtgactctcttcaagaatcattttcttcatctcatcgtcgtcaggaatacaaattatatctcgaaatctcaacaca 15976  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||| || ||||| |||| | |||| || ||||||||  ||| ||  || |||||||||||    
T  15977 ccctgatcatcgactttgaagtcactatcttccgtctgattacttgcaaccaacaagtccacaaactt 16044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 111877 - 111834
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||| |||||||||||||||||||||| |||||||    
T  111877 catcaactttagagggatctactgcaataccaccaccagaaata 111834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 112794 - 112650
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| |||| |||||||| || | ||| ||||| |||||||| |||| ||| ||||||||    
T  112794 cggatgaatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcctcatcgtctggaatacaaattctacctcggaatctcaacac 112696  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||  | ||||| |  || ||||||||| ||||||| |||||||||    
T  112695 acctcgatcatcgattttaaaatcaccatcttcagtatgattacta 112650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 102233 - 102400
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||||||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || | ||||||||| |||||||| |||| ||| |||||||||    
T  102233 cggatggatactcaagctacttctatgactctcttcaagaatcattttcttcatctcctcatcgtcaggaatacaaattctacctcggaatctcaacaca 102332  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || ||||| |  || ||||||| |  |||||| | ||||||| ||| ||  ||||| ||||||||    
T  102333 ccttggtcatcgattttaaaatcactattttcagtctcattactatcaaccaacaaatctacaaactt 102400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 103152 - 103193
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  103152 tcaactttagagggatctactgcaataccactaccagaaata 103193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 7014 - 7183
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| |||||||  |||| ||| |||||||||    
T  7014 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcgacctcggaatctcaacaca 7113  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||  | ||||| || || ||||||||| ||||||||||||| ||| ||| ||  || || ||||||||||    
T  7114 ccaaggtcatcgactttaaaatcaccatcttcagtttgattgctagcaaccaacaagtctacaaacttga 7183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 27940 - 28057
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| ||||| | ||||||  |  |||  ||||||||||||||||| |||| ||| |||||||| ||||  ||||| |  |    
T  27940 atactcaatctactcttgtgactctcttcaagaatcaacttcctcaattcatcgttgtcaggaatacaaactcttcctctgaatctcagtacaccctaat 28039  T
Q  177 catcaaccttgaaatcac 194  Q
    |||||| |||||||||||    
T  28040 catcaatcttgaaatcac 28057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 1908 - 2075
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| |||| || |||||||| |||||| |||| |||||||||||||  || | ||||||    
T  1908 cggatgaatactcaagctacttctgtgactctcttcgagaatca-tcttctttatctcatcattgtcaagaatacaaattctgcctcgaaatcgcaacac 2006  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     || || |||||||| || || |||| | | ||||| ||||| | | |||||| |||||| ||||||||    
T  2007 tccctgatcatcaactttaaagtcactatcctcagtctgatttccaccaatcaataaatctacaaactt 2075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 19373 - 19229
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| | ||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| |||||||||| ||    
T  19373 cggatgaatactcaagctacttatatgactctattcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaacctcaacgca 19274  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || |||||||| || || |||||| ||||||| |||||||||    
T  19273 ccatggtcatcaactttaaagtcaccatcttcagtctgattacta 19229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 57021 - 57186
Alignment:
Q  74 tggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgt 173  Q
    |||||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | |||||||||| |||| |  |||| ||| |||||||||||||    
T  57021 tggatactcaagctacttctatgactctcttcaagaatcattttcttcatctctgcatcgtcaggaatgtaaatccgacctcggaatctcaacacaccgt 57120  T
Q  174 gttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    | || || || || || |||||  ||||||| ||||||||| ||| ||  ||||| ||||||||||    
T  57121 gatcgtcgactttaaagtcaccgtcttcagtctgattactagcaaccaacaaatctacaaacttga 57186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 196721 - 196615
Alignment:
Q  133 gtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccaca 232  Q
    ||||||||||||||| |  |||| ||| ||||||||||  || |||||||| || || |||||| ||||||| ||||||||| ||| ||  || || |||    
T  196721 gtcaggaatgcaaatacgacctcggaatctcaacacacgatggtcatcaactttaaagtcaccatcttcagtctgattactagcaaccaacaagtctaca 196622  T
Q  233 aacttga 239  Q
    |||||||    
T  196621 aacttga 196615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 8366 - 8476
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||| ||||||||||||||| ||||||| ||||| | |||| ||||| || ||||| || ||||| ||||| |||||||| |||| ||| ||||||||    
T  8366 cggatgaatactcaagctactcctgtgactctcttcaagaatc-atcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaacac 8464  T
Q  169 accgtgttcatc 180  Q
    ||| || |||||    
T  8465 accttgatcatc 8476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 6223 - 6322
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||||||||||||||||||  | ||||||||||| | ||||| | | ||||||||||| |||||  |||||||||| || ||||  ||| ||||||||||    
T  6223 gatggatactcaagctacttctatgactttcttcaagaatcattttcttcatctcatcattgtctagaatgcaaatcctacctcgaaacttcaacacacc 6322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 7137 - 7181
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||| ||| ||||||||||||||||||| || |||||||    
T  7137 acatcaacttaagacggatctactgcaataccactaccagaaata 7181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 10322 - 10155
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| | | ||||| ||||||| ||||||||| |||||||||| || ||| | ||||||     
T  10322 cggatgtatactcaagctacttctgtgactctcttcaagaatcattttcttcatgtcatcgtcgtcaggaatacaaattctgcttcggaatcgcaacact 10223  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    || || || || ||||| || |||| | ||||||| || || | | |||| | |||||| ||||||||    
T  10222 ccctgatcgtcgaccttaaagtcactatcttcagtctggtttccaccaataaataaatctacaaactt 10155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 9424 - 9380
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||| |||||||| |||||||||| || |||||||    
T  9424 acatcaactttagacggatctaccgcaataccactaccagaaata 9380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 19651 - 19746
Alignment:
Q  119 ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||||||| || | ||||||||| |||||||  |||| ||| ||||||||||| || ||||| ||||| || |||||| ||||||| |||||||||    
T  19651 ttcatctcttcatcgtcaggaatacaaattcgacctcggaatctcaacacaccatggtcatcgaccttaaagtcaccatcttcagtctgattacta 19746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 35090 - 35170
Alignment:
Q  134 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    |||||||| |||||||  |||| ||| ||||||||||| || ||||| ||||| || |||||| ||||||| |||||||||    
T  35090 tcaggaatacaaattcgacctcggaatctcaacacaccatggtcatcgaccttaaagtcaccatcttcagtctgattacta 35170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 50432 - 50576
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| |  || ||||| |||||||| ||||  |||||||| |||    
T  50432 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcttctggaatacaaattctacctcgaaacctcaataca 50531  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || |||||||  || |||||||   ||||||| |||||||||    
T  50532 ccttgatcatcaattttaaaatcactgtcttcagtctgattacta 50576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 20518 - 20562
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||| |||||||| ||||||||| ||| |||||||    
T  20518 acatcaactttagagggatctacagcaataccatcaccagaaata 20562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 35942 - 35986
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||| |||||||| ||||||||| ||| |||||||    
T  35942 acatcaactttagagggatctacagcaataccatcaccagaaata 35986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 2894 - 2851
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||    
T  2894 catcaactttagagggatctactgcaataccactactagaaata 2851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 3761 - 3622
Alignment:
Q  72 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 171  Q
    |||| ||||||||||||||  | ||||| ||||| | |||||   |||||||||||||   ||||||||| |||||||| |||| ||| |||||| ||||    
T  3761 gatgaatactcaagctacttctatgactctcttcaagaatcatctttttcatctcatcaccgtcaggaatacaaattctacctcggaatctcaacgcacc 3662  T
Q  172 gtgttcatcaaccttgaaatcaccaccttcagtttgatta 211  Q
     ||  |||| |  || ||||||| ||||||||| ||||||    
T  3661 ttgagcatcgattttaaaatcactaccttcagtctgatta 3622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 151029 - 151069
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaat 58  Q
    ||||||||||| ||||||||||||||||||| || ||||||    
T  151029 tcaactttagacggatctactgcaataccactaccagaaat 151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 3201 - 3337
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| ||||||   |||| ||| ||||||||||| || |    
T  3201 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattaaacctcggaatctcaacacaccatggt 3300  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattact 213  Q
    |||| ||||| || |||||| ||||||| ||||||||    
T  3301 catcgaccttaaagtcaccatcttcagtctgattact 3337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 455 - 487
Alignment:
Q  16 catcaactttagatggatctactgcaataccac 48  Q
    |||||||||||||||||||||||||||||||||    
T  455 catcaactttagatggatctactgcaataccac 487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 5039 - 5174
Alignment:
Q  78 tactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||| || ||||| ||||| | |||| ||||| ||||||||||| | ||| ||||| |||||||||||||  || | |||||| || || |    
T  5039 tactcaagctacttttatgactctcttcaagaatc-atcttcttcatctcatcatcgtctggaatacaaattctgcctcgaaaacgcaacactccctgat 5137  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattact 213  Q
    |||| ||||| || |||| | ||||||| ||||||||    
T  5138 catcgaccttaaagtcactatcttcagtctgattact 5174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 14869 - 14825
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||| ||||||||||||||||||| || |||||||    
T  14869 acatcaactttagagggatctactgcaataccactaccagaaata 14825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 237
Target Start/End: Complemental strand, 15715 - 15621
Alignment:
Q  143 caaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
    ||||||||||||| ||| |||||||| || || ||||| |  || ||||||||| ||||||| ||||||||| ||| ||  || |||||||||||    
T  15715 caaattctgcctcggaatctcaacactccctgatcatcgattttaaaatcaccatcttcagtctgattactagcaaccaacaagtccacaaactt 15621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 367 - 411
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||||||||||||||| ||||||||||| || |||||||    
T  367 acatcaactttagatggatctaatgcaataccactacaagaaata 411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1715 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1715
Description:

Target: scaffold1715; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 13 - 72
Alignment:
Q  125 tcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaacc 184  Q
    ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |||||||||    
T  13 tcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgatcatcaacc 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1373 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1373
Description:

Target: scaffold1373; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 1223 - 1180
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    |||||||||| |||||||||||||||||||||| || |||||||    
T  1223 catcaactttcgatggatctactgcaataccactaccagaaata 1180  T

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Target: scaffold0333 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 17571 - 17614
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||| ||||||||||||||||||| || |||||||    
T  17571 catcaactttagacggatctactgcaataccactaccagaaata 17614  T

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Target: scaffold0333; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 16655 - 16798
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||| | | ||| |||||||||||||| ||||  |||||||| |||    
T  16655 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctca-catcgtctggaatgcaaattctacctcgaaacctcaagaca 16753  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || ||||| |  || ||||||| | |||| || |||||||||    
T  16754 ccttgatcatcgattttaaaatcactatcttctgtctgattacta 16798  T

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Target: scaffold0293 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 47
Target Start/End: Original strand, 14385 - 14416
Alignment:
Q  16 catcaactttagatggatctactgcaatacca 47  Q
    ||||||||||||||||||||||||||||||||    
T  14385 catcaactttagatggatctactgcaatacca 14416  T

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Target: scaffold0293; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 13468 - 13612
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| ||||||||     
T  13468 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacacg 13567  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    ||||| ||||| || || || |||||  || |||| |||||||||    
T  13568 ccgtggtcatcgactttaaagtcaccgtctccagtctgattacta 13612  T

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Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38337 - 38294
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||| ||||||||||||||||||| || |||||||    
T  38337 catcaactttagacggatctactgcaataccactaccagaaata 38294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 4147 - 4309
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgt 175  Q
    ||||||||||||||  | ||||| |||||||||||| ||||| || |||||||| | |||| |||| ||||||| |||||  || |||| |||||| ||     
T  4147 atactcaagctacttctatgactctcttccaaaatc-atcttcttaatctcatcatcgtcatgaatacaaattcggcctcgaaatctcagcacaccttgg 4245  T
Q  176 tcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||||||  | || |||| | | ||||| ||||||||| ||| ||  || |||||||||||||    
T  4246 tcatcaactctaaagtcactatcctcagtctgattactagcaaccaacaagtccacaaacttga 4309  T

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Target: scaffold0074; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 48
Target Start/End: Original strand, 5031 - 5061
Alignment:
Q  18 tcaactttagatggatctactgcaataccac 48  Q
    |||||||||||||||||||||||||||||||    
T  5031 tcaactttagatggatctactgcaataccac 5061  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 55672 - 55715
Alignment:
Q  16 catcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||||| ||||||||||||||||||| || |||||||    
T  55672 catcaactttagagggatctactgcaataccactaccagaaata 55715  T

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Target: scaffold0375 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 239
Target Start/End: Complemental strand, 3113 - 2951
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | ||||||||| ||||| |  |||| ||||||||||||||| || |    
T  3113 atactcaagctacttctatgactctcttcaagaatcattttcttcatctctacatcgtcaggaatacaaatccgacctcggaacctcaacacaccatggt 3014  T
Q  177 catcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    |||| || || || |||||| ||||||| | ||||||| ||| ||  || || ||||||||||    
T  3013 catcgactttaaagtcaccatcttcagtcttattactagcaaccaacaagtctacaaacttga 2951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 20154 - 20200
Alignment:
Q  15 acatcaactttagatggatctactgcaataccaccactagaaatagc 61  Q
    |||||||||||||| ||||||||| ||||||||| || |||||||||    
T  20154 acatcaactttagacggatctactacaataccactaccagaaatagc 20200  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 40781 - 40867
Alignment:
Q  153 ctctgaacctcaacacaccgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaacttga 239  Q
    ||||||| ||||||||||| || | |||||||||||| |||||| ||||||||| |||  ||  || ||| ||||| ||||||||||    
T  40781 ctctgaatctcaacacaccctgataatcaaccttgaagtcaccatcttcagtttcattgttagtaaccatcaaatcaacaaacttga 40867  T

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Target: scaffold0540 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 6718 - 6677
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||||||||||||||||| ||||| ||||    
T  6718 tcaactttagacggatctactgcaataccactactagcaata 6677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 685 - 726
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  685 tcaactttagacggatctactgcaataccactaccagaaata 726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 27268 - 27377
Alignment:
Q  77 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 176  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| |  |||||||| |||| ||| ||| ||||||||| |||||| || |    
T  27268 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcatgatcaggaatacaaactcttcctttgaacctcagcacaccctgat 27367  T
Q  177 catcaacctt 186  Q
    ||||||||||    
T  27368 catcaacctt 27377  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 50009 - 50050
Alignment:
Q  18 tcaactttagatggatctactgcaataccaccactagaaata 59  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  50009 tcaactttagacggatctactgcaataccactacgagaaata 50050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 864 - 896
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttc 102  Q
    |||||| ||||||||||||||||||||||||||    
T  864 cggatgaatactcaagctactcttgtgactttc 896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 186
Target Start/End: Original strand, 9971 - 10086
Alignment:
Q  71 ggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    ||||| || |||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | |||| |||| |||||||| |||| ||| |||||||||    
T  9971 ggatgaatgctcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtcatgaatacaaattcttcctcagaatctcaacaca 10069  T
Q  170 ccgtgttcatcaacctt 186  Q
    || || ||||| |||||    
T  10070 ccttggtcatcgacctt 10086  T

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Target: scaffold0379 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 7197 - 7030
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 168  Q
    |||||||||||||||||||||  ||||||| ||||| | ||||| |||| ||||| ||||| | || |||||| |||||||| ||||  || | ||||||    
T  7197 cggatggatactcaagctacttctgtgactctcttcaagaatca-tcttcttcatttcatcatcgtaaggaatacaaattctacctcaaaaacgcaacac 7099  T
Q  169 accgtgttcatcaaccttgaaatcaccaccttcagtttgattactaacaatcattaaatccacaaactt 237  Q
     || || ||||| ||||| || |||  | ||||||| |||| |||| ||| ||  || |||||||||||    
T  7098 tccctgatcatcgaccttaaagtcattatcttcagtctgatcactagcaaccaacaagtccacaaactt 7030  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 26250 - 26106
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| |||||||||||| |  | ||||| ||||| | ||||| | | ||||||||||| | ||| ||||| |||||||| ||||  || |||||||||    
T  26250 cggatgaatactcaagctatttctatgactctcttcaagaatcattttcttcatctcatcatcgtctggaatacaaattctacctcgaaatctcaacaca 26151  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    || || ||||| |  || |||||||   ||||||| |||||||||    
T  26150 ccttgatcatcgattttaaaatcactgtcttcagtctgattacta 26106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 32879 - 32735
Alignment:
Q  70 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 169  Q
    |||||| ||||||||||||||  | ||||| || || | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  32879 cggatgaatactcaagctacttctatgactctcctcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 32780  T
Q  170 ccgtgttcatcaaccttgaaatcaccaccttcagtttgattacta 214  Q
    ||||| || || || || || |||||  ||||||| |||||||||    
T  32779 ccgtgatcgtcgactttaaagtcaccgtcttcagtctgattacta 32735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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