View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0063_1D_low_30 (Length: 211)

Name: NF0063_1D_low_30
Description: NF0063_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0063_1D_low_30
NF0063_1D_low_30
[»] chr4 (33 HSPs)
chr4 (64-211)||(54041706-54041851)
chr4 (8-68)||(7487419-7487479)
chr4 (8-68)||(8939551-8939611)
chr4 (8-68)||(16664795-16664855)
chr4 (1-68)||(17361276-17361343)
chr4 (8-68)||(3035666-3035726)
chr4 (8-68)||(4653107-4653167)
chr4 (8-68)||(13534416-13534476)
chr4 (8-68)||(23419157-23419217)
chr4 (8-68)||(46717844-46717904)
chr4 (8-76)||(52447516-52447584)
chr4 (8-68)||(54919533-54919593)
chr4 (9-68)||(49873870-49873929)
chr4 (12-68)||(20353931-20353987)
chr4 (8-68)||(20786887-20786947)
chr4 (8-68)||(35045134-35045194)
chr4 (8-68)||(49970076-49970136)
chr4 (14-68)||(34073167-34073221)
chr4 (8-64)||(27962296-27962352)
chr4 (8-64)||(30827355-30827411)
chr4 (12-68)||(31292458-31292514)
chr4 (9-68)||(35824672-35824731)
chr4 (8-68)||(23933407-23933467)
chr4 (12-67)||(50496040-50496095)
chr4 (19-68)||(34073801-34073850)
chr4 (19-76)||(35045757-35045814)
chr4 (18-76)||(20342543-20342601)
chr4 (26-68)||(31309778-31309820)
chr4 (8-38)||(55450973-55451003)
chr4 (19-68)||(13533770-13533819)
chr4 (19-68)||(35825332-35825381)
chr4 (19-68)||(46718505-46718554)
chr4 (20-64)||(50495470-50495514)
[»] chr1 (26 HSPs)
chr1 (8-68)||(24781189-24781249)
chr1 (8-68)||(33704725-33704785)
chr1 (8-68)||(36307967-36308027)
chr1 (8-68)||(7153049-7153109)
chr1 (8-68)||(10772858-10772918)
chr1 (8-68)||(14488646-14488706)
chr1 (8-68)||(29521749-29521809)
chr1 (8-76)||(31030207-31030275)
chr1 (9-68)||(36730791-36730850)
chr1 (8-68)||(44512244-44512304)
chr1 (14-68)||(48127899-48127953)
chr1 (15-68)||(25655975-25656028)
chr1 (12-68)||(12768365-12768421)
chr1 (8-76)||(46118354-46118422)
chr1 (8-66)||(35954544-35954602)
chr1 (12-76)||(30302849-30302913)
chr1 (20-68)||(46463910-46463958)
chr1 (14-68)||(29649522-29649576)
chr1 (19-68)||(25656626-25656675)
chr1 (15-68)||(33006291-33006344)
chr1 (9-68)||(29648742-29648801)
chr1 (21-68)||(33005623-33005670)
chr1 (19-68)||(36731452-36731501)
chr1 (1-66)||(52404727-52404790)
chr1 (1-66)||(52405828-52405891)
chr1 (1-66)||(52406160-52406223)
[»] chr8 (37 HSPs)
chr8 (8-68)||(2082112-2082172)
chr8 (8-68)||(41545147-41545207)
chr8 (8-68)||(276907-276967)
chr8 (8-68)||(638882-638942)
chr8 (8-68)||(824688-824748)
chr8 (8-68)||(3704968-3705028)
chr8 (8-68)||(3850202-3850262)
chr8 (8-68)||(17948331-17948391)
chr8 (8-68)||(25583439-25583499)
chr8 (9-68)||(23347002-23347061)
chr8 (8-61)||(6093506-6093559)
chr8 (8-68)||(4622581-4622641)
chr8 (8-68)||(15883259-15883319)
chr8 (8-68)||(16096084-16096144)
chr8 (8-76)||(27912561-27912629)
chr8 (8-76)||(27958980-27959048)
chr8 (12-68)||(28085742-28085798)
chr8 (8-68)||(30556527-30556587)
chr8 (8-68)||(39858185-39858245)
chr8 (8-68)||(42735769-42735829)
chr8 (1-68)||(44256268-44256335)
chr8 (14-67)||(42645492-42645545)
chr8 (15-68)||(43695012-43695065)
chr8 (8-68)||(13141143-13141203)
chr8 (8-68)||(18955419-18955479)
chr8 (8-68)||(40304213-40304273)
chr8 (19-68)||(42646152-42646201)
chr8 (19-68)||(45408420-45408469)
chr8 (12-64)||(30105919-30105971)
chr8 (23-68)||(13140503-13140548)
chr8 (19-68)||(30555877-30555926)
chr8 (19-68)||(39858815-39858864)
chr8 (19-68)||(40617323-40617372)
chr8 (19-68)||(43694355-43694404)
chr8 (20-64)||(30111563-30111607)
chr8 (24-68)||(38576901-38576945)
chr8 (24-68)||(41545669-41545713)
[»] chr7 (33 HSPs)
chr7 (8-68)||(20120157-20120217)
chr7 (8-68)||(40015478-40015538)
chr7 (8-68)||(44459094-44459154)
chr7 (8-68)||(46555286-46555346)
chr7 (8-68)||(47909178-47909238)
chr7 (8-68)||(3415946-3416006)
chr7 (8-68)||(9663392-9663452)
chr7 (8-68)||(16277361-16277421)
chr7 (8-68)||(18994758-18994818)
chr7 (8-68)||(41858340-41858400)
chr7 (8-68)||(48683392-48683452)
chr7 (8-68)||(48951969-48952029)
chr7 (1-68)||(46000842-46000909)
chr7 (12-68)||(725328-725384)
chr7 (8-68)||(4925072-4925132)
chr7 (8-68)||(21815533-21815593)
chr7 (12-68)||(28589392-28589448)
chr7 (8-68)||(33246430-33246490)
chr7 (8-68)||(48607422-48607482)
chr7 (14-68)||(17968115-17968169)
chr7 (12-64)||(21729838-21729890)
chr7 (1-68)||(41336433-41336501)
chr7 (8-68)||(44882885-44882945)
chr7 (14-68)||(23594366-23594420)
chr7 (14-68)||(30759890-30759944)
chr7 (19-68)||(30759236-30759285)
chr7 (19-68)||(44521245-44521294)
chr7 (20-68)||(41289307-41289355)
chr7 (20-58)||(21736276-21736314)
chr7 (19-68)||(9662746-9662795)
chr7 (19-68)||(46935436-46935485)
chr7 (19-68)||(47504414-47504463)
chr7 (8-64)||(46936075-46936131)
[»] chr6 (20 HSPs)
chr6 (8-68)||(16918519-16918579)
chr6 (8-68)||(17550720-17550780)
chr6 (5-68)||(11154509-11154572)
chr6 (8-68)||(4589714-4589774)
chr6 (8-68)||(27782591-27782651)
chr6 (8-68)||(955478-955538)
chr6 (8-68)||(11837480-11837540)
chr6 (12-61)||(27438528-27438577)
chr6 (8-68)||(14104114-14104174)
chr6 (12-68)||(21861162-21861218)
chr6 (8-68)||(23580400-23580460)
chr6 (8-68)||(28578731-28578791)
chr6 (8-68)||(25109664-25109723)
chr6 (15-68)||(24083246-24083299)
chr6 (19-77)||(25119043-25119101)
chr6 (19-76)||(954820-954877)
chr6 (19-68)||(11153874-11153923)
chr6 (19-68)||(24083887-24083936)
chr6 (19-68)||(28579368-28579417)
chr6 (20-68)||(5687512-5687560)
[»] chr5 (25 HSPs)
chr5 (8-76)||(12499519-12499587)
chr5 (8-68)||(20546016-20546076)
chr5 (8-68)||(42612081-42612141)
chr5 (8-68)||(745434-745494)
chr5 (8-68)||(30130782-30130842)
chr5 (8-68)||(37270555-37270615)
chr5 (8-68)||(13305290-13305350)
chr5 (8-68)||(19665080-19665140)
chr5 (8-68)||(39588577-39588637)
chr5 (8-68)||(824674-824734)
chr5 (8-68)||(9591927-9591987)
chr5 (8-68)||(27019959-27020019)
chr5 (14-68)||(7180924-7180978)
chr5 (14-68)||(9987188-9987242)
chr5 (14-68)||(27550906-27550960)
chr5 (24-68)||(15420505-15420549)
chr5 (19-68)||(27551562-27551611)
chr5 (9-68)||(11984768-11984827)
chr5 (18-68)||(744790-744840)
chr5 (18-76)||(27019310-27019368)
chr5 (19-68)||(9986534-9986583)
chr5 (19-76)||(11985427-11985484)
chr5 (14-68)||(31551995-31552053)
chr5 (19-68)||(37271196-37271245)
chr5 (8-44)||(34654210-34654246)
[»] chr3 (45 HSPs)
chr3 (8-68)||(16008940-16009000)
chr3 (8-68)||(18410368-18410428)
chr3 (8-68)||(30440126-30440186)
chr3 (8-68)||(37785589-37785649)
chr3 (8-68)||(41101823-41101883)
chr3 (8-68)||(50548318-50548378)
chr3 (1-68)||(6175477-6175544)
chr3 (9-68)||(45170147-45170206)
chr3 (8-68)||(4232914-4232974)
chr3 (8-68)||(30043322-30043382)
chr3 (8-68)||(37219932-37219992)
chr3 (8-68)||(41697931-41697991)
chr3 (8-68)||(44843032-44843092)
chr3 (8-68)||(47912777-47912837)
chr3 (14-68)||(15084404-15084458)
chr3 (12-66)||(27325498-27325552)
chr3 (12-66)||(27331735-27331789)
chr3 (8-68)||(16464071-16464131)
chr3 (8-68)||(27126362-27126422)
chr3 (8-68)||(27321160-27321220)
chr3 (8-68)||(38235660-38235720)
chr3 (12-68)||(38696997-38697053)
chr3 (8-68)||(45053554-45053614)
chr3 (8-68)||(51722635-51722695)
chr3 (8-61)||(23019947-23020000)
chr3 (15-68)||(53778213-53778266)
chr3 (8-68)||(11121753-11121813)
chr3 (1-68)||(22605020-22605087)
chr3 (8-68)||(13213613-13213674)
chr3 (8-68)||(22428774-22428834)
chr3 (16-68)||(40423846-40423898)
chr3 (8-68)||(42826149-42826209)
chr3 (8-68)||(43338501-43338561)
chr3 (20-68)||(53777562-53777610)
chr3 (20-68)||(55412018-55412066)
chr3 (14-68)||(3892525-3892579)
chr3 (19-68)||(37181188-37181237)
chr3 (15-68)||(37181812-37181865)
chr3 (8-68)||(8851619-8851678)
chr3 (8-68)||(10827562-10827622)
chr3 (20-68)||(51722003-51722051)
chr3 (14-68)||(30363521-30363575)
chr3 (19-68)||(18762737-18762786)
chr3 (19-68)||(31312825-31312874)
chr3 (19-67)||(42826792-42826840)
[»] chr2 (24 HSPs)
chr2 (8-68)||(37725344-37725404)
chr2 (8-68)||(38282103-38282163)
chr2 (12-76)||(3851572-3851636)
chr2 (8-68)||(4738081-4738141)
chr2 (8-76)||(39967001-39967069)
chr2 (12-68)||(2292147-2292203)
chr2 (8-68)||(3906734-3906794)
chr2 (8-68)||(15152704-15152764)
chr2 (8-68)||(25223605-25223665)
chr2 (12-68)||(39774949-39775005)
chr2 (8-68)||(77445-77505)
chr2 (12-68)||(3754729-3754785)
chr2 (8-68)||(6644791-6644851)
chr2 (8-68)||(15399114-15399174)
chr2 (23-68)||(14005921-14005966)
chr2 (15-68)||(42080648-42080701)
chr2 (19-68)||(27550809-27550858)
chr2 (18-76)||(39966352-39966410)
chr2 (19-68)||(2291494-2291543)
chr2 (19-68)||(4737432-4737481)
chr2 (19-68)||(15399779-15399828)
chr2 (20-64)||(3850996-3851040)
chr2 (17-65)||(27551448-27551496)
chr2 (20-64)||(42080065-42080109)
[»] scaffold0208 (1 HSPs)
scaffold0208 (14-68)||(5618-5672)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-61)||(48785-48834)
[»] scaffold0115 (1 HSPs)
scaffold0115 (8-60)||(21035-21087)
[»] scaffold0060 (1 HSPs)
scaffold0060 (12-68)||(56444-56500)
[»] scaffold0259 (2 HSPs)
scaffold0259 (8-68)||(5909-5969)
scaffold0259 (19-68)||(5170-5219)


Alignment Details
Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 64 - 211
Target Start/End: Complemental strand, 54041851 - 54041706
Alignment:
Q  64 tgaaattaatttggagaaaattattaaactatcccatattcatcccctctcaatcgtgtaaagttttatatgacttttatgttaagaattttcgttctct 163  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  54041851 tgaaattaatttggagaaaattattaaactctcccatactcatctcctctcaatcgtgtaaagttttat--gacttttatgttaagaattttcgttctct 54041754  T
Q  164 ctaatattttaggcaagatctgccactaacgctatgtattttgattga 211  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  54041753 ctaatattttaggcaagatctgccactaacactatgtattttgattga 54041706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 7487479 - 7487419
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  7487479 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 7487419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 8939611 - 8939551
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  8939611 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 8939551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 16664855 - 16664795
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  16664855 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 16664795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17361343 - 17361276
Alignment:
Q  1 gtttggtgttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  17361343 gtttggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacattcagatgaaa 17361276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3035666 - 3035726
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3035666 gttctgaaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 3035726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 4653167 - 4653107
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  4653167 gttctgaaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 4653107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 13534416 - 13534476
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  13534416 gttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 13534476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 23419157 - 23419217
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  23419157 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcgagatgaaa 23419217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 46717904 - 46717844
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||    
T  46717904 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaatgacatccagatgaaa 46717844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 52447584 - 52447516
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||    
T  52447584 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccatatgaaataaatttg 52447516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 54919593 - 54919533
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  54919593 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcaagatgaaa 54919533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 49873929 - 49873870
Alignment:
Q  9 ttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  49873929 ttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 49873870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 20353931 - 20353987
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||| || |||| |||||||||||||||    
T  20353931 tggaatggaagaaattttatgaatgtaaatgatgaatttaaagacatccagatgaaa 20353987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 20786887 - 20786947
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||    
T  20786887 gttctggaatggaagaaattttatgaatgtaaataatgaatttaaggacatctagatgaaa 20786947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 35045194 - 35045134
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||    
T  35045194 gttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatctagatgaaa 35045134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 49970076 - 49970136
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||| ||||||||| |||||||| || ||||||||||||||||||||    
T  49970076 gttctggaatggaagaaaatttatgaatataaatgatgaatttaaggacatccagatgaaa 49970136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 34073221 - 34073167
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  34073221 gaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 34073167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 27962296 - 27962352
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagat 64  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||||    
T  27962296 gttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggatatccagat 27962352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 30827355 - 30827411
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagat 64  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  30827355 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacatctagat 30827411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 31292458 - 31292514
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||| ||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  31292458 tggaatgaaagaaatttaatgaatgtaaatgatgaatttaaggacatccagatgaaa 31292514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 35824731 - 35824672
Alignment:
Q  9 ttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||| |||| || |||||||||||  |||||||    
T  35824731 ttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatctggatgaaa 35824672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 23933407 - 23933467
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||| |||||||| ||||||| |||| || ||||||||||||| ||||||    
T  23933407 gttctggaatggaaggaattttataaatgtaagtgatgaatttaaggacatccaaatgaaa 23933467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 50496040 - 50496095
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaa 67  Q
    ||||||||| ||||||||||||||||||  ||| || |||||||||||||||||||    
T  50496040 tggaatggatgaaattttatgaatgtaagcgatgaatttaaggacatccagatgaa 50496095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 34073801 - 34073850
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||||    
T  34073801 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 34073850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 35045757 - 35045814
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||| ||||||    
T  35045757 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaataaatttg 35045814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 20342601 - 20342543
Alignment:
Q  18 ggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    |||| ||||||||||||| ||| |||| || |||||||||| |||||||||| ||||||    
T  20342601 ggaataaattttatgaatataactgataaatttaaggacattcagatgaaataaatttg 20342543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 31309820 - 31309778
Alignment:
Q  26 ttttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||| |||| || ||||||||||||||||||||    
T  31309820 ttttatgaatgtaagtgatgaatttaaggacatccagatgaaa 31309778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 38
Target Start/End: Original strand, 55450973 - 55451003
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgta 38  Q
    |||||||||||||||||||||||||||||||    
T  55450973 gttctggaatggaagaaattttatgaatgta 55451003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 13533819 - 13533770
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  13533819 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 13533770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 35825332 - 35825381
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  35825332 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 35825381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 46718505 - 46718554
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  46718505 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 46718554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 50495514 - 50495470
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagat 64  Q
    |||||||||||||||||||||| || || |||||||||| |||||    
T  50495514 aagaaattttatgaatgtaaattataaacttaaggacattcagat 50495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 5e-24; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 24781249 - 24781189
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24781249 gttctggaatggaagaaattttatgaatgtaaatgattaatttaaggacatccagatgaaa 24781189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 33704785 - 33704725
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  33704785 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 33704725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 36308027 - 36307967
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  36308027 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 36307967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 7153109 - 7153049
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  7153109 gttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaa 7153049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 10772918 - 10772858
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10772918 gttcttgaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 10772858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 14488646 - 14488706
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  14488646 gttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 14488706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 29521749 - 29521809
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  29521749 gttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 29521809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 31030275 - 31030207
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  31030275 gttctggaattgaagaaattttatgaatgtaaatgataaatttaaggacatcgagatgaaataaatttg 31030207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 36730850 - 36730791
Alignment:
Q  9 ttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  36730850 ttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 36730791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 44512244 - 44512304
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| |||||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  44512244 gttctagaatggaataaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 44512304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 48127953 - 48127899
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  48127953 gaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccaaatgaaa 48127899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 25656028 - 25655975
Alignment:
Q  15 aatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  25656028 aatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 25655975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 12768421 - 12768365
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  12768421 tggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 12768365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 46118422 - 46118354
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    |||||||||||||| ||||||||||||||||| |||| || ||||||||||||| || |||| ||||||    
T  46118422 gttctggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccaaattaaataaatttg 46118354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 35954602 - 35954544
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatga 66  Q
    ||||| |||||||||||||||||||||||||| |||| || ||||| ||||||||||||    
T  35954602 gttctagaatggaagaaattttatgaatgtaagtgatgaatttaagtacatccagatga 35954544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 30302849 - 30302913
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    |||||| ||| ||||||||||||||||| |||| || |||||||||||||||| |||| ||||||    
T  30302849 tggaattgaataaattttatgaatgtaagtgatgaatttaaggacatccagattaaataaatttg 30302913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 46463910 - 46463958
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||| || |||||||||| |||||||||    
T  46463910 aagaaattttatgaatgtaaatgataaaattaaggacattcagatgaaa 46463958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 29649522 - 29649576
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||| | |||| || ||||||||||| ||||||||    
T  29649522 gaatggaagaaattttatgaatgttagtgatgaatttaaggacatcaagatgaaa 29649576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 25656626 - 25656675
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||||    
T  25656626 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 25656675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 33006291 - 33006344
Alignment:
Q  15 aatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||| |||  || || |||||||||||||||||    
T  33006291 aatggaagaaattttatgaatgtaagtgaagaatttgaggacatccagatgaaa 33006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 29648801 - 29648742
Alignment:
Q  9 ttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||| |||||||||||||||||| || |||| || |||||||||| || ||||||    
T  29648801 ttctggaatagaagaaattttatgaatgaaattgataaatttaaggacattcaaatgaaa 29648742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 33005670 - 33005623
Alignment:
Q  21 agaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||| || |||||||||| || ||||||    
T  33005670 agaaattttatgaatgtaaatgataaacttaaggacattcatatgaaa 33005623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 36731452 - 36731501
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  36731452 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 36731501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 52404790 - 52404727
Alignment:
Q  1 gtttggtgttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatga 66  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||  | ||||||||||||| ||||    
T  52404790 gtttggggttctggaatggaagaaa-tttatgaatgtaagtgatgga-ttaaggacatccaaatga 52404727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 52405891 - 52405828
Alignment:
Q  1 gtttggtgttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatga 66  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||  | ||||||||||||| ||||    
T  52405891 gtttggggttctggaatggaagaaa-tttatgaatgtaagtgatgga-ttaaggacatccaaatga 52405828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 52406223 - 52406160
Alignment:
Q  1 gtttggtgttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatga 66  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||  | ||||||||||||| ||||    
T  52406223 gtttggggttctggaatggaagaaa-tttatgaatgtaagtgatgga-ttaaggacatccaaatga 52406160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 2082112 - 2082172
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  2082112 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 2082172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 41545207 - 41545147
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  41545207 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 41545147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 276967 - 276907
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  276967 gttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaa 276907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 638882 - 638942
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  638882 gttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaa 638942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 824688 - 824748
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  824688 gttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaa 824748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3704968 - 3705028
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3704968 gttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 3705028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 3850262 - 3850202
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  3850262 gttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 3850202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 17948331 - 17948391
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  17948331 gttctggaatggaagaaattttatgaatgtaaatgacgaatttaaggacatccagatgaaa 17948391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 25583439 - 25583499
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  25583439 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatctagatgaaa 25583499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 23347002 - 23347061
Alignment:
Q  9 ttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  23347002 ttctggaatggaagaaactttatgaatgtaaatgatgaatttaaggacatccagatgaaa 23347061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 6093559 - 6093506
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatcca 61  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  6093559 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcca 6093506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 4622581 - 4622641
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  4622581 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaagaacatccagatgaaa 4622641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 15883259 - 15883319
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| |||||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  15883259 gttctagaatggaagaaattctatgaatgtaaatgatgaatttaaggacatccagatgaaa 15883319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 16096144 - 16096084
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||    
T  16096144 gttctggaatggaagaaattttataaatgtaaatgatgaatttaagcacatccagatgaaa 16096084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 27912629 - 27912561
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||| ||||||    
T  27912629 gttcttgaatggaagaaattttatgaatgtaaatgatgaatttaaggatatctagatgaaataaatttg 27912561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 27959048 - 27958980
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||| ||||||    
T  27959048 gttcttgaatggaagaaattttatgaatgtaaatgatgaatttaaggatatctagatgaaataaatttg 27958980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 28085742 - 28085798
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  28085742 tggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 28085798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30556527 - 30556587
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| |||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  30556527 gttctagaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 30556587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 39858245 - 39858185
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| ||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  39858245 gttctgaaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 39858185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 42735829 - 42735769
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||||||    
T  42735829 gttctggaatggaagaaattttataaatgtaagtgatgaatttaaggacatccagatgaaa 42735769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44256335 - 44256268
Alignment:
Q  1 gtttggtgttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  44256335 gtttggggttctagaaaggaagaaattttatgaatgtaaatgatgaatttaaggacatctagatgaaa 44256268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 42645545 - 42645492
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaa 67  Q
    |||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  42645545 gaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaa 42645492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 43695012 - 43695065
Alignment:
Q  15 aatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  43695012 aatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 43695065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 13141143 - 13141203
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| ||||||||||||||||||||| |||| || ||||| ||||||||||||||    
T  13141143 gttctggaatagaagaaattttatgaatgtaagtgatgaatttaagtacatccagatgaaa 13141203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 18955479 - 18955419
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| |||||||||||||||||||||||||| || | |||||||| |||||||||    
T  18955479 gttctggaatagaagaaattttatgaatgtaaatgatgaattcaaggacattcagatgaaa 18955419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 40304213 - 40304273
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||| |||||||||||||||||||| |||| || ||||||||||||||||||||    
T  40304213 gttctagaatgaaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 40304273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 42646152 - 42646201
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||||    
T  42646152 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 42646201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 45408469 - 45408420
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||||    
T  45408469 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 45408420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 30105971 - 30105919
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagat 64  Q
    ||||||| |||||||||||||||||||| |||| || |||||||||| |||||    
T  30105971 tggaatgaaagaaattttatgaatgtaagtgatgaatttaaggacattcagat 30105919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 13140548 - 13140503
Alignment:
Q  23 aaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||| ||| |||| || ||||||||||||||||||||    
T  13140548 aaattttatgaatataactgataaatttaaggacatccagatgaaa 13140503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 30555926 - 30555877
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  30555926 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 30555877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 39858815 - 39858864
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  39858815 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 39858864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 40617323 - 40617372
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||| |||| || |||||||||| |||||||||    
T  40617323 gaagacattttatgaatgtaactgataaatttaaggacattcagatgaaa 40617372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 43694404 - 43694355
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  43694404 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 43694355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 30111563 - 30111607
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagat 64  Q
    |||||||||||||||| |||||||| || |||||||||| |||||    
T  30111563 aagaaattttatgaatataaatgataaacttaaggacattcagat 30111607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 38576901 - 38576945
Alignment:
Q  24 aattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||| |||| || ||||||||||| ||||||||    
T  38576901 aattttatgaatgtaagtgatgaatttaaggacatcgagatgaaa 38576945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 41545669 - 41545713
Alignment:
Q  24 aattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||| ||| ||||||| |||||||||| |||||||||    
T  41545669 aattttatgaatataactgattaatttaaggacattcagatgaaa 41545713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 1e-21; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 20120217 - 20120157
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  20120217 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 20120157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 40015478 - 40015538
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  40015478 gttctggaatggaagaaattttatgaatgtaaatgataaatttaaggacatccagatgaaa 40015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 44459094 - 44459154
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  44459094 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 44459154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 46555286 - 46555346
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  46555286 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 46555346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 47909178 - 47909238
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  47909178 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 47909238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3415946 - 3416006
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||    
T  3415946 gttctggaatggaagaaattttatgaaagtaaatgatgaatttaaggacatccagatgaaa 3416006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 9663392 - 9663452
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  9663392 gttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 9663452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 16277361 - 16277421
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  16277361 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 16277421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 18994758 - 18994818
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  18994758 gttctggaatggaataaattttatgaatgtaaatgatgaagttaagaacatccagatgaaa 18994818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 41858340 - 41858400
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  41858340 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatacagatgaaa 41858400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 48683452 - 48683392
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  48683452 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 48683392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 48951969 - 48952029
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  48951969 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatacagatgaaa 48952029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 46000909 - 46000842
Alignment:
Q  1 gtttggtgttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| |||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  46000909 gtttggggttctggaattgaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 46000842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 725328 - 725384
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  725328 tggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcgagatgaaa 725384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 4925132 - 4925072
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  4925132 gttctggaattgaagaaattttatgaatgtaaatgatgaatttaaggacatctagatgaaa 4925072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 21815593 - 21815533
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||||||||||||||||||| || |||| |||||||||||||||    
T  21815593 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaaagacatccagatgaaa 21815533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 28589392 - 28589448
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  28589392 tggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccaaatgaaa 28589448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 33246430 - 33246490
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| |||||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  33246430 gttctagaatggaagaaattttatgaatataaatgatgaatttaaggacatccagatgaaa 33246490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 48607422 - 48607482
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  48607422 gttctggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 48607482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 17968115 - 17968169
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  17968115 gaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 17968169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 21729890 - 21729838
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagat 64  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  21729890 tggaatggaagaaattttatgaatgtaattgatgaatttaaggacatccagat 21729838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41336501 - 41336433
Alignment:
Q  1 gtttggtgttctggaatggaagaaa-ttttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| |||||| ||||||| ||| ||||||||||||||||||| || ||||||||||||||||||||    
T  41336501 gtttggggttctgaaatggaaaaaaattttatgaatgtaaatgataaatttaaggacatccagatgaaa 41336433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 44882945 - 44882885
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||| ||||||||||||||||||||||| || ||||||||||  ||||||||    
T  44882945 gttctggaatggatgaaattttatgaatgtaaatgatgaatttaaggacatttagatgaaa 44882885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 23594366 - 23594420
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||| ||||||    
T  23594366 gaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccacatgaaa 23594420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 30759890 - 30759944
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||| |||| || |||||||||| || ||||||    
T  30759890 gaatggaagaaattttatgaatgtaagtgatgaatttaaggacattcaaatgaaa 30759944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 30759285 - 30759236
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||||    
T  30759285 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 30759236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 44521294 - 44521245
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||||    
T  44521294 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 44521245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 41289355 - 41289307
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||| |||| || |||||||||| |||||||||    
T  41289355 aagaaattttatgaatgtaactgataaacttaaggacattcagatgaaa 41289307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 21736276 - 21736314
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacat 58  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  21736276 aagaaattttatgaatgtaaatgataaacttaaggacat 21736314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 9662795 - 9662746
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  9662795 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 9662746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 46935485 - 46935436
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||  ||| || |||||||||| |||||||||    
T  46935485 gaagaaattttatgaatgtaacagataaatttaaggacattcagatgaaa 46935436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 47504414 - 47504463
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||  ||| || |||||||||| |||||||||    
T  47504414 gaagaaattttatgaatgtaaccgataaatttaaggacattcagatgaaa 47504463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 46936075 - 46936131
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagat 64  Q
    ||||| |||||||||||||||||| ||| ||| |||| || ||||| ||||||||||    
T  46936075 gttcttgaatggaagaaattttataaatataagtgatgaatttaagaacatccagat 46936131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 16918579 - 16918519
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  16918579 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 16918519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 17550720 - 17550780
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  17550720 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 17550780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 11154509 - 11154572
Alignment:
Q  5 ggtgttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  11154509 ggtgttctggaatcgaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 11154572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 4589714 - 4589774
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  4589714 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagaagaaa 4589774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 27782651 - 27782591
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  27782651 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaagaacatccagatgaaa 27782591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 955478 - 955538
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||| |||||||||||||||| |||||||| || ||||||||||||||||||||    
T  955478 gttctggaatgtaagaaattttatgaatataaatgatgaatttaaggacatccagatgaaa 955538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 11837480 - 11837540
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || |||| |||||| ||||||||    
T  11837480 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaatgacatctagatgaaa 11837540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 27438577 - 27438528
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatcca 61  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  27438577 tggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcca 27438528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 14104174 - 14104114
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||| ||||||||||||||| ||||||||| || ||||| ||||||||||||||    
T  14104174 gttctggaatgaaagaaattttatgaaagtaaatgatgaatttaagaacatccagatgaaa 14104114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 21861162 - 21861218
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  21861162 tggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 21861218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 23580460 - 23580400
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||| |||||||| |||| ||||||||||| || ||||||||||||||||||||    
T  23580460 gttctggaatgaaagaaattgtatggatgtaaatgatgaatttaaggacatccagatgaaa 23580400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 28578791 - 28578731
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| |||||||||||| |||||||||||| |||| || ||||||||||||||||||||    
T  28578791 gttctgaaatggaagaaatgttatgaatgtaagtgatgaatttaaggacatccagatgaaa 28578731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 25109723 - 25109664
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||  | |||| || ||||||||||||||||||||    
T  25109723 gttctggaatggaagaaattttatgaatg-cattgatgaatttaaggacatccagatgaaa 25109664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 24083299 - 24083246
Alignment:
Q  15 aatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||| |||||||||||||||||||| |||| || |||||||||| |||||||||    
T  24083299 aatgaaagaaattttatgaatgtaagtgatgaatttaaggacattcagatgaaa 24083246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 25119043 - 25119101
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttgg 77  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||  |||||||    
T  25119043 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaagaaatttgg 25119101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 954877 - 954820
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    ||||||||||||||||| ||| |||| || |||||||||| ||||| |||| ||||||    
T  954877 gaagaaattttatgaatataactgataaatttaaggacattcagataaaataaatttg 954820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 11153923 - 11153874
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  11153923 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 11153874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 24083887 - 24083936
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| || ||||||    
T  24083887 gaagaaattttatgaatgtaattgataaatttaaggacattcaaatgaaa 24083936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 28579368 - 28579417
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  28579368 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 28579417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 5687560 - 5687512
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  5687560 aagaaattttatgaatataactgataaatttaaggacattcagatgaaa 5687512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 12499587 - 12499519
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  12499587 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcgagatgaaataaatttg 12499519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 20546016 - 20546076
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  20546016 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 20546076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 42612081 - 42612141
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  42612081 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 42612141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 745434 - 745494
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||    
T  745434 gttctggaatggaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaa 745494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30130782 - 30130842
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  30130782 gttctggaatggaagaaattttatgaatataaatgatgaatttaaggacatccagatgaaa 30130842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 37270615 - 37270555
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  37270615 gttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 37270555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 13305290 - 13305350
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||||| ||||||    
T  13305290 gttctggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccaaatgaaa 13305350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 19665140 - 19665080
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| |||||||||||||||||||||||||||||| || |||| |||||||||||||||    
T  19665140 gttctgtaatggaagaaattttatgaatgtaaatgatgaatttaaagacatccagatgaaa 19665080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 39588637 - 39588577
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||| |||||| |||||||||||||||||| || ||||||||||||||||||||    
T  39588637 gttctggaatgaaagaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaa 39588577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 824674 - 824734
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||| |||||||| |||| ||||||||||| || ||||||||||||||||||||    
T  824674 gttctggaatgaaagaaattgtatggatgtaaatgatgaatttaaggacatccagatgaaa 824734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 9591987 - 9591927
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||  ||||| ||||||||    
T  9591987 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaacaacatctagatgaaa 9591927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 27019959 - 27020019
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| |||||||| ||| |||||||||||||||||| || ||||||||||||||||||||    
T  27019959 gttctagaatggaaaaaaatttatgaatgtaaatgatgaatttaaggacatccagatgaaa 27020019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 7180924 - 7180978
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  7180924 gaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 7180978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 9987188 - 9987242
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||| |||| || ||||||||||| ||||||||    
T  9987188 gaatggaagaaattttatgaatgtaattgatgaatttaaggacatctagatgaaa 9987242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 27550960 - 27550906
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||| ||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  27550960 gaatagaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 27550906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 15420549 - 15420505
Alignment:
Q  24 aattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  15420549 aattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 15420505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 27551562 - 27551611
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||||    
T  27551562 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 27551611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 11984827 - 11984768
Alignment:
Q  9 ttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||| |||| ||||| |||||||||||||||||||| || ||||||| ||| ||||||||    
T  11984827 ttctagaatagaagacattttatgaatgtaaatgatgaatttaaggagatcaagatgaaa 11984768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 744840 - 744790
Alignment:
Q  18 ggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||| ||||||||||||||||| |||| || |||||||||| |||||||||    
T  744840 ggaataaattttatgaatgtaactgataaatttaaggacattcagatgaaa 744790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 27019368 - 27019310
Alignment:
Q  18 ggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    |||| ||||||||||||| ||| |||| || |||||||||| |||||||||| ||||||    
T  27019368 ggaataaattttatgaatataactgataaatttaaggacattcagatgaaataaatttg 27019310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 9986583 - 9986534
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || ||||||||||  ||||||||    
T  9986583 gaagaaattttatgaatgtaactgataaatttaaggacatttagatgaaa 9986534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 11985427 - 11985484
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    ||||||||||||||||| ||| |||| || ||||||| || |||||||||| ||||||    
T  11985427 gaagaaattttatgaatataactgataaatttaaggaaattcagatgaaataaatttg 11985484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 31551995 - 31552053
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaat----gattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||| |    ||| || ||||||||||||||||||||    
T  31551995 gaatggaagaaattttatgaatgtaattaagtgatgaatttaaggacatccagatgaaa 31552053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 37271196 - 37271245
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  37271196 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 37271245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 34654210 - 34654246
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgat 44  Q
    |||||||||||||||||||||||||| ||||| ||||    
T  34654210 gttctggaatggaagaaattttatgagtgtaagtgat 34654246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 1e-21; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 16009000 - 16008940
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  16009000 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 16008940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 18410428 - 18410368
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  18410428 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 18410368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30440126 - 30440186
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  30440126 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 30440186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 37785649 - 37785589
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  37785649 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 37785589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 41101883 - 41101823
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  41101883 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 41101823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 50548318 - 50548378
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  50548318 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 50548378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6175477 - 6175544
Alignment:
Q  1 gtttggtgttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  6175477 gtttggggttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatctagatgaaa 6175544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 45170206 - 45170147
Alignment:
Q  9 ttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  45170206 ttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 45170147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 4232914 - 4232974
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  4232914 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatctagatgaaa 4232974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 30043322 - 30043382
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  30043322 gttctggaatggaagaaatttcatgaatgtaaatgatgaatttaaggacatccagatgaaa 30043382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 37219932 - 37219992
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  37219932 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatacagatgaaa 37219992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 41697931 - 41697991
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  41697931 gttctggaatggaagaaattttatgaatgtaaacgatgaatttaaggacatccagatgaaa 41697991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 44843032 - 44843092
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  44843032 gttctggaattgaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 44843092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 47912777 - 47912837
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||    
T  47912777 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggaaatccagatgaaa 47912837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 15084404 - 15084458
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  15084404 gaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 15084458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 27325498 - 27325552
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatga 66  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  27325498 tggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatga 27325552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 27331735 - 27331789
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatga 66  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  27331735 tggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatga 27331789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 16464131 - 16464071
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||||||||||||||||||| || |||| |||||||||||||||    
T  16464131 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaaagacatccagatgaaa 16464071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 27126422 - 27126362
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  27126422 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacattcagatgaaa 27126362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 27321220 - 27321160
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||||| |||||||||    
T  27321220 gttctggaatgaaagaaattttatgaatgtaaatgatgaatttaaggacattcagatgaaa 27321160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 38235720 - 38235660
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| |||||||||||||| |||| || ||||||||||||||||||||    
T  38235720 gttctggaatggaagaacttttatgaatgtaagtgatgaatttaaggacatccagatgaaa 38235660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 38697053 - 38696997
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  38697053 tggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 38696997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 45053554 - 45053614
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||    
T  45053554 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggagatctagatgaaa 45053614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 51722635 - 51722695
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||| || |||| || ||||||||||||||||||||    
T  51722635 gttctggaatggaagaaattttatgaatgaaagtgatgaatttaaggacatccagatgaaa 51722695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 23020000 - 23019947
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatcca 61  Q
    ||||||||||||||||||||||||||||||||||||| || ||||| |||||||    
T  23020000 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaagtacatcca 23019947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 53778213 - 53778266
Alignment:
Q  15 aatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  53778213 aatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 53778266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 11121813 - 11121753
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||||||||||||||||||| || ||||||| ||| ||||||||    
T  11121813 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggagatctagatgaaa 11121753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22605087 - 22605020
Alignment:
Q  1 gtttggtgttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||| || |||||||||| | |||||||    
T  22605087 gtttggggttctagaatggaagaaattttatgaaagtaaatgatgaatttaaggacattcggatgaaa 22605020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 13213674 - 13213613
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgt-aaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||| ||||||| || ||||||| ||| ||||||||    
T  13213674 gttctggaatggaagaaattttatgaatgtaaaatgatgaatttaaggatatctagatgaaa 13213613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 22428774 - 22428834
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| |||| ||||||||||||||||| || |||| || ||||||||||||||||||||    
T  22428774 gttctgaaatgtaagaaattttatgaatgcaagtgatgaatttaaggacatccagatgaaa 22428834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 40423898 - 40423846
Alignment:
Q  16 atggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||| |||  || ||||||||||||||||||||    
T  40423898 atggaagaaattttatgaatgtaagtgaggaatttaaggacatccagatgaaa 40423846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 42826209 - 42826149
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||| ||||||||||||||| |||| || |||| ||||| |||||||||    
T  42826209 gttctggaatggaagatattttatgaatgtaagtgatgaatttaaagacattcagatgaaa 42826149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 43338561 - 43338501
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||||||| |||| || ||| | ||||| ||||||||    
T  43338561 gttctggaatggaagaaattttatgaatgtaagtgatgaatttatgaacatcaagatgaaa 43338501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 53777610 - 53777562
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||| || |||||||||| |||||||||    
T  53777610 aagaaattttatgaatgtaaatgataaacttaaggacattcagatgaaa 53777562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 55412018 - 55412066
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||| || |||||||||| |||||||||    
T  55412018 aagaaattttatgaatgtaaatgataaatttaaggacattcagatgaaa 55412066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 3892525 - 3892579
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| |||||||||||||||||||| |||| || ||||||| ||||||||||||    
T  3892525 gaatgaaagaaattttatgaatgtaagtgatgaatttaaggatatccagatgaaa 3892579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 37181237 - 37181188
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||||    
T  37181237 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 37181188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 37181812 - 37181865
Alignment:
Q  15 aatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||| |||||||||||||||||| |||| || | ||||||||||||||||||    
T  37181812 aatggacgaaattttatgaatgtaagtgatgaattcaaggacatccagatgaaa 37181865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 8851619 - 8851678
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||| ||||||||||||||| || ||||||| ||| ||||||||    
T  8851619 gttcttgaatggaagaaattt-atgaatgtaaatgatgaatttaaggagatctagatgaaa 8851678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 10827562 - 10827622
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| ||||||||||||||||||||  | || || ||||||||||| ||||||||    
T  10827562 gttctggaatagaagaaattttatgaatgtatgtcatgaatttaaggacatctagatgaaa 10827622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 51722051 - 51722003
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||| |||| || |||||||||| |||||||||    
T  51722051 aagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 51722003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 30363521 - 30363575
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||| ||||| ||||||||||||||| |||| ||  |||||||||||||||||||    
T  30363521 gaatagaagacattttatgaatgtaattgatgaatctaaggacatccagatgaaa 30363575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 18762737 - 18762786
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  18762737 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 18762786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 31312874 - 31312825
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  31312874 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 31312825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 42826792 - 42826840
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaa 67  Q
    ||||||||||||||||||||| |||| || |||||||||| || |||||    
T  42826792 gaagaaattttatgaatgtaactgataaatttaaggacattcatatgaa 42826840  T

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Target: chr2 (Bit Score: 53; Significance: 1e-21; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 37725344 - 37725404
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  37725344 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 37725404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 38282103 - 38282163
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  38282103 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 38282163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 3851572 - 3851636
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| ||||||    
T  3851572 tggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaataaatttg 3851636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 4738081 - 4738141
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||    
T  4738081 gttctggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatccaaatgaaa 4738141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 39967001 - 39967069
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||||| |||||||||| ||||||    
T  39967001 gttctggaattgaagaaattttatgaatgtaaatgatgaatttaaggacattcagatgaaataaatttg 39967069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 2292147 - 2292203
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  2292147 tggaatggaagaaattttatgaatgtaactgatgaatttaaggacatccagatgaaa 2292203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 3906734 - 3906794
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| ||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  3906734 gttctagaatggaagaaattttatgaatgtaaatgatgaatttaaggacattcagatgaaa 3906794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 15152764 - 15152704
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| |||||||||||||||||||||||||| || |||||||||||| |||||||    
T  15152764 gttctggaatagaagaaattttatgaatgtaaatgatgaatttaaggacatcctgatgaaa 15152704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 25223665 - 25223605
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  25223665 gttctggaatcgaagaaattttataaatgtaaatgatgaatttaaggacatccagatgaaa 25223605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 39774949 - 39775005
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  39774949 tggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 39775005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 77445 - 77505
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| ||| |||||||| ||||||||||||| || ||||||||||||||||||||    
T  77445 gttctggaatagaaaaaattttacgaatgtaaatgatgaatttaaggacatccagatgaaa 77505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 3754729 - 3754785
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||| ||||||||    
T  3754729 tggaatggaagaaattttatgaatgtaagtgatgaatttaaggacatcgagatgaaa 3754785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 6644851 - 6644791
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||| ||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  6644851 gttccggaattgaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 6644791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 15399174 - 15399114
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| |||||||||||||| |||| || |||||||||||||| |||||    
T  15399174 gttctggaatggaagaagttttatgaatgtaagtgatgaatttaaggacatccagttgaaa 15399114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 14005921 - 14005966
Alignment:
Q  23 aaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||| || ||||||||||||||||||||    
T  14005921 aaattttatgaatgtaaatgatgaatttaaggacatccagatgaaa 14005966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 42080648 - 42080701
Alignment:
Q  15 aatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||| |||||||||||||||||||| |||| || ||||||||||||||||||||    
T  42080648 aatgaaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 42080701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 27550858 - 27550809
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||||    
T  27550858 gaagaaattttatgaatgtaactgataaatttaaggacattcagatgaaa 27550809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 39966410 - 39966352
Alignment:
Q  18 ggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaattaatttg 76  Q
    |||| ||||||||||||| ||| |||| || |||||||||| |||||||||| ||||||    
T  39966410 ggaataaattttatgaatataactgataaatttaaggacattcagatgaaataaatttg 39966352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 2291543 - 2291494
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  2291543 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 2291494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 4737481 - 4737432
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  4737481 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 4737432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 15399779 - 15399828
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||| ||| |||| || |||||||||| |||||||||    
T  15399779 gaagaaattttatgaatataactgataaatttaaggacattcagatgaaa 15399828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 3851040 - 3850996
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagat 64  Q
    |||||||||||||||||||||| || || |||||||||| |||||    
T  3851040 aagaaattttatgaatgtaaattataaacttaaggacattcagat 3850996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 27551448 - 27551496
Alignment:
Q  17 tggaagaaattttatgaatgtaaatgattaagttaaggacatccagatg 65  Q
    ||||||||||||||||||||||| |||| || |||| || |||||||||    
T  27551448 tggaagaaattttatgaatgtaagtgatgaatttaaagagatccagatg 27551496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 42080109 - 42080065
Alignment:
Q  20 aagaaattttatgaatgtaaatgattaagttaaggacatccagat 64  Q
    |||||||||||||||||||||| || || |||||||||| |||||    
T  42080109 aagaaattttatgaatgtaaattataaacttaaggacattcagat 42080065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 5618 - 5672
Alignment:
Q  14 gaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  5618 gaatggaagaaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 5672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 61
Target Start/End: Original strand, 48785 - 48834
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatcca 61  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||    
T  48785 tggaatggaagaaattttatgaatgtaaatgatgaatttaaggacatcca 48834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 21087 - 21035
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatcc 60  Q
    |||||||||||||| |||||||||||||||||||||| || ||||||||||||    
T  21087 gttctggaatggaaaaaattttatgaatgtaaatgatgaatttaaggacatcc 21035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 56500 - 56444
Alignment:
Q  12 tggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    |||||||||| ||||||||||||||||| |||| || ||||||||||||||||||||    
T  56500 tggaatggaataaattttatgaatgtaagtgatgaatttaaggacatccagatgaaa 56444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 5909 - 5969
Alignment:
Q  8 gttctggaatggaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||| |||||||||||| |||||||||||||||||| || ||| ||| ||||||||||||    
T  5909 gttctagaatggaagaaagtttatgaatgtaaatgatgaatttagggaaatccagatgaaa 5969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 5219 - 5170
Alignment:
Q  19 gaagaaattttatgaatgtaaatgattaagttaaggacatccagatgaaa 68  Q
    ||||||||||||||||||||| |||| || |||||||||| || ||||||    
T  5219 gaagaaattttatgaatgtaattgataaatttaaggacattcaaatgaaa 5170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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