View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0063_2D_high_33 (Length: 256)
Name: NF0063_2D_high_33
Description: NF0063_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0063_2D_high_33
Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 49 - 249
Target Start/End: Original strand, 32261303 - 32261503
Alignment:
Q
49
acaagcatcgtcctcgagtcttaagttcatcaagcatatttgatgaagaaatgagaacaatccaaaacactccaagaaattcagagtttcgcattgttac
148
Q
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
32261303
acaagcatcgtcctcgagtattaagttcatcaagcatatttgatgaagaaatgagaacaatccaaaacactccaagaaattcagagtttcgcattgttac
32261402
T
Q
149
ttgtttacatagtgaaggaaacgttcgtggcatgactgccctagtggaaatttgcaacccaattcaagaaagtcccttatgtgtctttgtgattcatctc
248
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
32261403
ttgtttacatagtgaaggaaacgttcgtggcatgactgccctagtggaaatttgcaacccaattcaagaaagtcccttatgtgtctttgtgattcatctc
32261502
T
Q
249
a
249
Q
|
T
32261503
a
32261503
T
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