View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0063_2D_low_67 (Length: 260)
Name: NF0063_2D_low_67
Description: NF0063_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0063_2D_low_67
Alignment Details
Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 126 - 255
Target Start/End: Complemental strand, 2113115 - 2112986
Alignment:
Q
126
tatattaaccttgacaaacatcatgtgacataattaggggaatgttgaatcaataattaagtatgtggtcatgagtttaatcttcgctcaatggagacgt
225
Q
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
2113115
tatattaaccttgacaaacatcatgtgacataattagggggatgttgaatcaataattaagtatgtggtcatgagtttaatcttcgctcaatggagacgt
2113016
T
Q
226
atggaaaagagtatgttaaaatcatgatca
255
Q
|||||||||| |||||||||||||||||||
T
2113015
atggaaaagaatatgttaaaatcatgatca
2112986
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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