View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0063_2D_low_82 (Length: 228)
Name: NF0063_2D_low_82
Description: NF0063_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0063_2D_low_82
Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 46466249 - 46466457
Alignment:
Q
1
ttccctcctagtcttctttgtatccttggttgtgtagccatacttctgcagattccctggcaagtaatcaaacaagttcaaaagtgttctaataagtaag
100
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
46466249
ttccctcctagtcttctttgtatccttggttgtgtagccatacttctgcagattccctggcaagtaatcaaacaagttcaaaagtgttctaataagtaag
46466348
T
Q
101
ttaataaatagaaagaaaggattagttaccatagttagtgtcttctttgatctgaaggtgagaaattgcttctttagatactagtgtagttcatttgcca
200
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
46466349
ttaataaatagaaagaaaggattagttaccatagttagtgtcttctttgatctgaaggtgagaaattgcttctttagatactagtgtagttcatttgcca
46466448
T
Q
201
tgaacttat
209
Q
|||||||||
T
46466449
tgaacttat
46466457
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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