View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0063_2D_low_84 (Length: 225)
Name: NF0063_2D_low_84
Description: NF0063_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0063_2D_low_84
Alignment Details
Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 30635750 - 30635591
Alignment:
Q
18
catactagactcaggagaatattaatttcaaaatcaaactagttgcagtcgaacacatgcattatgcatgacacattttttatttaaaaatgcaatgaat
117
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
T
30635750
catactagactcaggagaatattaatttcaaaatcaaactagttgcagtcgaacacatgcattatgcatgacacattttttatttaaaaatacaatgaat
30635651
T
Q
118
cagaggctagaatataaaaatcttatattatttactttagtcaacaattcccttgctctc
177
Q
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
T
30635650
cagaggctagaatatagaaatcttatattatttactttagtcaacaattcccttgctctc
30635591
T
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