View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0066-INSERTION-7 (Length: 194)
Name: NF0066-INSERTION-7
Description: NF0066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0066-INSERTION-7 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 45285939 - 45285746
Alignment:
| Q |
1 |
caaagatccaaaccagcttatgttacagggccacagtcatcattcagccatcatggtctatcccattcatgatttttctcaaacatttaccgtcttcata |
100 |
Q |
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| T |
45285939 |
caaagatccagaccagcttatgttacagggccacagtcatcattcagccatcatggtctatcccattcatgatttttctcaaacatttaccgtcttcata |
45285840 |
T |
|
| Q |
101 |
taagatacacatatacattgcagtacaaagtagacaaccggtgttcctattgctagatactatcaaatattgcaacaataccaaaactaattgc |
194 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45285839 |
taatatacacatatacattgcagtacaaagtagacaaccggtgttcctattgctagatactatcaaatattgcaacaataccaaaactaattgc |
45285746 |
T |
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