View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0069_low_17 (Length: 289)

Name: NF0069_low_17
Description: NF0069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0069_low_17
NF0069_low_17
[»] chr3 (40 HSPs)
chr3 (30-278)||(6162645-6162893)
chr3 (42-162)||(6137615-6137735)
chr3 (30-162)||(13284738-13284870)
chr3 (30-162)||(6131812-6131944)
chr3 (160-256)||(53827646-53827742)
chr3 (163-254)||(19866733-19866824)
chr3 (163-256)||(44836463-44836556)
chr3 (163-239)||(44833470-44833546)
chr3 (162-246)||(47064863-47064947)
chr3 (163-254)||(15041993-15042084)
chr3 (163-227)||(4969875-4969939)
chr3 (160-235)||(11342887-11342962)
chr3 (161-256)||(42994880-42994975)
chr3 (190-256)||(42381642-42381708)
chr3 (163-241)||(42947375-42947453)
chr3 (163-241)||(53814561-53814639)
chr3 (163-240)||(15040681-15040758)
chr3 (163-256)||(35995137-35995230)
chr3 (163-256)||(42950973-42951066)
chr3 (190-254)||(34086827-34086891)
chr3 (163-254)||(7666949-7667040)
chr3 (163-254)||(11343784-11343876)
chr3 (163-254)||(50663875-50663966)
chr3 (163-241)||(2325561-2325639)
chr3 (164-210)||(13843624-13843670)
chr3 (160-242)||(19872140-19872222)
chr3 (160-230)||(40517534-40517604)
chr3 (169-241)||(7665739-7665811)
chr3 (169-241)||(34082845-34082917)
chr3 (191-254)||(39688739-39688802)
chr3 (163-210)||(44430418-44430465)
chr3 (163-256)||(16931446-16931539)
chr3 (167-260)||(39649863-39649956)
chr3 (164-241)||(42993567-42993644)
chr3 (163-236)||(54528961-54529034)
chr3 (162-241)||(35485242-35485321)
chr3 (163-210)||(39685212-39685259)
chr3 (190-254)||(3860826-3860889)
chr3 (183-219)||(35106003-35106039)
chr3 (161-241)||(39645772-39645852)
[»] chr6 (15 HSPs)
chr6 (162-261)||(35060875-35060974)
chr6 (161-247)||(17436034-17436120)
chr6 (162-242)||(31522534-31522614)
chr6 (163-241)||(14153354-14153432)
chr6 (162-260)||(32275752-32275850)
chr6 (161-256)||(14154562-14154657)
chr6 (163-241)||(17436541-17436619)
chr6 (163-241)||(32274184-32274262)
chr6 (164-256)||(4321723-4321815)
chr6 (163-236)||(23608427-23608500)
chr6 (190-241)||(14830419-14830470)
chr6 (180-258)||(25400850-25400928)
chr6 (163-236)||(806545-806618)
chr6 (163-236)||(14430944-14431017)
chr6 (213-241)||(31483693-31483721)
[»] chr4 (40 HSPs)
chr4 (162-256)||(33164490-33164584)
chr4 (163-256)||(36172165-36172258)
chr4 (162-261)||(34235684-34235783)
chr4 (163-254)||(36217870-36217961)
chr4 (161-256)||(51718172-51718267)
chr4 (163-256)||(28798130-28798223)
chr4 (160-261)||(46817412-46817513)
chr4 (163-254)||(40450931-40451022)
chr4 (171-241)||(36174579-36174649)
chr4 (163-256)||(53267786-53267879)
chr4 (162-254)||(24972389-24972481)
chr4 (166-241)||(24974146-24974221)
chr4 (163-254)||(36498906-36498997)
chr4 (161-254)||(12586182-12586276)
chr4 (190-256)||(42099511-42099577)
chr4 (180-241)||(53265809-53265870)
chr4 (161-241)||(40312794-40312874)
chr4 (161-241)||(40322870-40322950)
chr4 (166-241)||(36501865-36501940)
chr4 (160-210)||(628085-628135)
chr4 (162-253)||(12572807-12572898)
chr4 (163-260)||(45246962-45247059)
chr4 (163-236)||(55523725-55523798)
chr4 (163-254)||(636571-636662)
chr4 (162-237)||(55527917-55527992)
chr4 (163-241)||(12586798-12586875)
chr4 (160-241)||(23283211-23283292)
chr4 (163-236)||(38676939-38677012)
chr4 (193-254)||(40923406-40923467)
chr4 (169-210)||(40923925-40923966)
chr4 (164-236)||(27992116-27992188)
chr4 (161-241)||(45237409-45237489)
chr4 (163-242)||(51719773-51719852)
chr4 (163-237)||(28796620-28796694)
chr4 (163-261)||(37576543-37576641)
chr4 (163-249)||(38677654-38677740)
chr4 (163-236)||(27992309-27992382)
chr4 (161-210)||(37577271-37577320)
chr4 (163-236)||(54208180-54208253)
chr4 (163-239)||(47043991-47044067)
[»] chr2 (23 HSPs)
chr2 (164-256)||(12969249-12969340)
chr2 (162-256)||(18387240-18387334)
chr2 (162-254)||(37892995-37893087)
chr2 (163-242)||(8273245-8273324)
chr2 (166-241)||(11712961-11713036)
chr2 (163-241)||(12967270-12967349)
chr2 (162-254)||(11573632-11573724)
chr2 (197-256)||(42119191-42119250)
chr2 (163-227)||(20685006-20685070)
chr2 (163-254)||(939559-939650)
chr2 (193-256)||(22492476-22492539)
chr2 (162-224)||(20686819-20686881)
chr2 (160-241)||(18394970-18395051)
chr2 (191-254)||(24928686-24928749)
chr2 (177-235)||(8277394-8277452)
chr2 (163-241)||(22496076-22496154)
chr2 (163-240)||(2154262-2154339)
chr2 (162-210)||(24929364-24929412)
chr2 (163-254)||(25678272-25678363)
chr2 (163-261)||(31133179-31133277)
chr2 (163-227)||(22787999-22788063)
chr2 (162-210)||(25678919-25678967)
chr2 (162-222)||(25389869-25389929)
[»] chr8 (17 HSPs)
chr8 (161-242)||(33220786-33220867)
chr8 (163-254)||(23558970-23559061)
chr8 (161-256)||(43640958-43641053)
chr8 (163-241)||(5967237-5967315)
chr8 (164-254)||(9384617-9384707)
chr8 (190-256)||(33800483-33800549)
chr8 (161-210)||(9418585-9418634)
chr8 (161-218)||(37687335-37687392)
chr8 (162-254)||(34276191-34276283)
chr8 (162-242)||(34279560-34279640)
chr8 (162-241)||(4640795-4640874)
chr8 (169-223)||(9448715-9448769)
chr8 (160-218)||(33220021-33220078)
chr8 (162-241)||(43635129-43635208)
chr8 (163-240)||(37686616-37686693)
chr8 (162-208)||(31762240-31762286)
chr8 (174-224)||(43995919-43995969)
[»] scaffold1063 (1 HSPs)
scaffold1063 (162-258)||(1474-1570)
[»] chr7 (25 HSPs)
chr7 (163-256)||(20379653-20379746)
chr7 (166-254)||(26604160-26604248)
chr7 (163-254)||(38790884-38790974)
chr7 (166-241)||(5172-5247)
chr7 (163-256)||(38792033-38792126)
chr7 (163-254)||(44552689-44552780)
chr7 (193-256)||(48221683-48221746)
chr7 (163-256)||(31823589-31823682)
chr7 (162-241)||(1537246-1537325)
chr7 (162-248)||(30359704-30359788)
chr7 (163-218)||(42548161-42548216)
chr7 (163-220)||(5060848-5060905)
chr7 (163-241)||(19365395-19365473)
chr7 (163-241)||(26502431-26502509)
chr7 (163-241)||(26590205-26590283)
chr7 (167-241)||(38386178-38386252)
chr7 (163-224)||(25428731-25428792)
chr7 (166-241)||(41957005-41957079)
chr7 (163-249)||(26009369-26009455)
chr7 (163-224)||(28138759-28138820)
chr7 (160-239)||(5061730-5061809)
chr7 (163-261)||(10526964-10527062)
chr7 (161-219)||(42548781-42548839)
chr7 (163-224)||(28139452-28139513)
chr7 (160-197)||(31853315-31853352)
[»] chr1 (30 HSPs)
chr1 (159-254)||(28442918-28443013)
chr1 (162-241)||(39650195-39650274)
chr1 (163-240)||(45688308-45688385)
chr1 (162-238)||(3792559-3792635)
chr1 (163-239)||(45691050-45691126)
chr1 (163-260)||(28475963-28476060)
chr1 (163-256)||(50069219-50069312)
chr1 (163-235)||(45691196-45691268)
chr1 (163-235)||(45691338-45691410)
chr1 (161-236)||(11821158-11821233)
chr1 (161-241)||(28446530-28446610)
chr1 (163-254)||(33403113-33403204)
chr1 (163-247)||(49033725-49033808)
chr1 (163-241)||(33617644-33617722)
chr1 (163-240)||(28474792-28474869)
chr1 (190-254)||(35577511-35577575)
chr1 (163-254)||(48025556-48025647)
chr1 (162-236)||(2094367-2094441)
chr1 (163-240)||(3792454-3792532)
chr1 (161-240)||(50065476-50065555)
chr1 (162-224)||(5602943-5603005)
chr1 (163-236)||(37260918-37260991)
chr1 (190-241)||(35563532-35563583)
chr1 (163-241)||(33401408-33401486)
chr1 (162-236)||(35392109-35392183)
chr1 (162-241)||(35563363-35563438)
chr1 (175-236)||(35391487-35391548)
chr1 (163-227)||(3792296-3792360)
chr1 (217-255)||(45688382-45688419)
chr1 (166-219)||(9862914-9862967)
[»] chr5 (30 HSPs)
chr5 (162-254)||(6702369-6702461)
chr5 (159-256)||(40008708-40008805)
chr5 (161-241)||(19401999-19402079)
chr5 (167-254)||(30491782-30491869)
chr5 (160-235)||(17644606-17644681)
chr5 (162-260)||(34017600-34017698)
chr5 (191-256)||(1975287-1975352)
chr5 (162-254)||(5504735-5504827)
chr5 (162-256)||(3458013-3458107)
chr5 (164-254)||(4845302-4845392)
chr5 (174-256)||(19399501-19399583)
chr5 (163-240)||(34016002-34016079)
chr5 (163-260)||(38739387-38739484)
chr5 (162-241)||(1974155-1974234)
chr5 (193-240)||(30489753-30489800)
chr5 (163-236)||(1145141-1145214)
chr5 (163-239)||(759160-759236)
chr5 (169-241)||(6706035-6706107)
chr5 (163-254)||(33144171-33144262)
chr5 (163-236)||(11135741-11135814)
chr5 (159-236)||(36580219-36580296)
chr5 (162-236)||(6158948-6159021)
chr5 (163-241)||(28677886-28677964)
chr5 (163-208)||(763327-763372)
chr5 (192-236)||(33037386-33037430)
chr5 (162-208)||(17636343-17636389)
chr5 (161-222)||(40266607-40266669)
chr5 (163-239)||(4846929-4847006)
chr5 (162-222)||(1145895-1145955)
chr5 (148-232)||(6269221-6269305)
[»] scaffold0041 (2 HSPs)
scaffold0041 (163-254)||(24352-24443)
scaffold0041 (160-210)||(23484-23534)
[»] scaffold1763 (1 HSPs)
scaffold1763 (163-236)||(369-442)
[»] scaffold1455 (1 HSPs)
scaffold1455 (163-222)||(392-451)
[»] scaffold0246 (1 HSPs)
scaffold0246 (163-210)||(2884-2931)
[»] scaffold0163 (1 HSPs)
scaffold0163 (158-230)||(35771-35843)
[»] scaffold0016 (1 HSPs)
scaffold0016 (163-238)||(69722-69797)
[»] scaffold0262 (1 HSPs)
scaffold0262 (163-236)||(8384-8457)
[»] scaffold0037 (1 HSPs)
scaffold0037 (166-223)||(38316-38373)


Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 30 - 278
Target Start/End: Complemental strand, 6162893 - 6162645
Alignment:
Q  30 acttgtagtgcataggagaaattccttggaaaagaactttggttttgtttgtatcaacttctgcattaacccaattagcccaagttgtcaaaccacttct 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6162893 acttgtagtgcataggagaaattccttggaaaagaactttggttttgtttgtatcaacttctgcattaacccaattagcccaagttgtcaaaccacttct 6162794  T
Q  130 gaaagcttccatacgatccatgtctttcactatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgca 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6162793 gaaagcttccatacgatccatgtctttcactatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgca 6162694  T
Q  230 tgttaacatgcgtagcgtgacttaagtcacgcaaatcaccccgcttcat 278  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6162693 tgttaacatgcgtagcgtgacttaagtcatgcaaatcaccccgcttcat 6162645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 6137735 - 6137615
Alignment:
Q  42 taggagaaattccttggaaaagaactttggttttgtttgtatcaacttctgcattaacccaattagcccaagttgtcaaaccacttctgaaagcttccat 141  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  6137735 taggagaaattccttggaaaagaactttggttttgcttgtatcaacttctgcattaacccagttagcccaagttgtcaaaccagttctaaaagcttccat 6137636  T
Q  142 acgatccatgtctttcactat 162  Q
    |||||||||||||||||||||    
T  6137635 acgatccatgtctttcactat 6137615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 30 - 162
Target Start/End: Original strand, 13284738 - 13284870
Alignment:
Q  30 acttgtagtgcataggagaaattccttggaaaagaactttggttttgtttgtatcaacttctgcattaacccaattagcccaagttgtcaaaccacttct 129  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13284738 acttgtagtgtacaggagaaattccttggaaaagaactttggttttgcttgtatcaacttctgcattaacccaattagcccaagttgtcaaaccagttct 13284837  T
Q  130 gaaagcttccatacgatccatgtctttcactat 162  Q
     |||||||||||| | ||||| |||||||||||    
T  13284838 aaaagcttccatatggtccatctctttcactat 13284870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 162
Target Start/End: Complemental strand, 6131944 - 6131812
Alignment:
Q  30 acttgtagtgcataggagaaattccttggaaaagaactttggttttgtttgtatcaacttctgcattaacccaattagcccaagttgtcaaaccacttct 129  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||  ||||||||| ||||||||||||||||||||| |||     
T  6131944 acttgtagtgcataggagaaattccttgaaaaagaactttggttttgcttgtatcaacctctttattaacccagttagcccaagttgtcaaaccagttcg 6131845  T
Q  130 gaaagcttccatacgatccatgtctttcactat 162  Q
     ||||||||||||||||||||||||||||||||    
T  6131844 aaaagcttccatacgatccatgtctttcactat 6131812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 53827742 - 53827646
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||||||| |||| ||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  53827742 tatgaattctgctcattacctaaatagtatcgctcattcccaaagtaaatgtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 53827646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 19866733 - 19866824
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||||||||  ||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  19866733 gaattctgctcattacccaaacagtatcgctcattcccaaagtaaaagtcaaaaatgcccctacgcatgttaacttgcgtagcgtgagttaa 19866824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 44836556 - 44836463
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||||||||||| | ||||||||||||||||| | |||||||| ||||| | |||||||||||||||||||||| ||||||||||||||||    
T  44836556 gaattctgctcattatctaaatggttccgctcatttctaaagtaaatgtccatattgcccctacgcatgttaacatgtgtagcgtgacttaagt 44836463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 44833470 - 44833546
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatg 239  Q
    ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||||||    
T  44833470 gaattctgctcattacccaaatggttccgtttatttccaaagtaaaagtccaaaatgcccctacgcatattaacatg 44833546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 47064863 - 47064947
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcg 246  Q
    |||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  47064863 tgaattatgctcattacccaaatgattctgctcattcccaaagtaaaagtccaaaatgctcctacgcatgttaacttacgtagcg 47064947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 15042084 - 15041993
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||||||||   |  ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  15042084 gaattctgctcattacccaaacaatatcgctcattcccaaagtaaaagtcgaaaatgcccctacgcatgttaacttgcgtagcgtgagttaa 15041993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 4969875 - 4969939
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  4969875 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtcgaaaatacccctacg 4969939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 11342887 - 11342962
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaa 235  Q
    |||||||||||||||||   |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  11342887 tatgaattctgctcattgttcaaatggttccgttcattcccaaagtaaaagtccaaaaagcccctacgcatgttaa 11342962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 42994975 - 42994880
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||||||||||||||| |||| ||  ||||||||||||||||||| ||| ||||||||| |  |||||||||||||| |||||||||||||||    
T  42994975 atgaattctgctcattacctaaatagtatcgctcattcccaaagtaaatgtctaaaatgcccatgggcatgttaacatgcatagcgtgacttaagt 42994880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 190 - 256
Target Start/End: Original strand, 42381642 - 42381708
Alignment:
Q  190 cgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  42381642 cgctcatttccaaagtaaatgtccaaaatgcccttacgcatgttaacatgcgtagcgtgacttaagt 42381708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 42947375 - 42947453
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||| ||||| || | ||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  42947375 gaattctgctcattacctaaatgatttcactcattctcaaagtaaaagtccaaaatgctcctacgcatgttaacatgcg 42947453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 53814639 - 53814561
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |  ||||||||||||||||||||||| |||||    
T  53814639 gaattctgctcattacccaaatggattcgctcattcccaaagtaaatgatcaaaatgcccctacgcatgttaatatgcg 53814561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 15040681 - 15040758
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgc 240  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| | |  ||||||||||||||||||||||||||    
T  15040681 gaattctgctcattacccaaatggattcgctcattcccaaagtaaatgactgaaatgcccctacgcatgttaacatgc 15040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 35995137 - 35995230
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||| ||||||||||||||||||| |||| ||| ||||||||||||  ||||||||||| |||||||||||||||||  ||||| ||||||    
T  35995137 gaattctactcattacccaaatggttctgctccttcgcaaagtaaaagtttaaaatgccccttcgcatgttaacatgcgtcacgtgagttaagt 35995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 42951066 - 42950973
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||| |||||  |||||||||||||||||||||| ||||| | ||||| |||| ||||||||||| ||||||||| ||||||    
T  42951066 gaattctgctcattactcaaatacttccgctcattcccaaagtaaatgtccatattgcccatacgtatgttaacatgtgtagcgtgatttaagt 42950973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 34086891 - 34086827
Alignment:
Q  190 cgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  34086891 cgctcattcccaaagtaaaagtcgaaaatgcccctacgcatgttaacttgcgtagcgtgagttaa 34086827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 7667040 - 7666949
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||| |||||||||||||||  ||  |||||||||||||| |||||||| ||||||||||||||||||||||| ||| |||||||| ||||    
T  7667040 gaattttgctcattacccaaacagtatcgctcattcccaaaataaaagtcaaaaatgcccctacgcatgttaacttgcatagcgtgagttaa 7666949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 11343876 - 11343784
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccc-tacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||  |||||||||||||||| || ||||||||||||| |||||||||| |||||||||||||    ||||||||||||||    
T  11343876 gaattctgctcattattcaaatggttccgctcactctcaaagtaaaagtcaaaaatgccccatacgcatgttaactcaggtagcgtgacttaa 11343784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 50663875 - 50663966
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||| | ||||||||| || |||||||||||||||||||   |||||||||||||||||||||||||   |||||||||| ||||    
T  50663875 gaattctgctcttcacccaaatgatttcgctcattcccaaagtaaataaccaaaatgcccctacgcatgttaactcacgtagcgtgagttaa 50663966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 2325639 - 2325561
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||| |||||| | |||||||| ||  ||||||||||||||||||  |||||| |||||||||||||||||||||    
T  2325639 gaattctggtcattatctaaatggtttcgtccattcccaaagtaaaagtttaaaatgtccctacgcatgttaacatgcg 2325561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 13843670 - 13843624
Alignment:
Q  164 aattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  13843670 aattctgctcattacccaaatggtttcgctcattcccaaagtaaaag 13843624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 19872222 - 19872140
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgt 242  Q
    |||||||||||| ||||||| |||||  | |||||||||| ||| |||| | | |||||||| ||||||||||||||||||||    
T  19872222 tatgaattctgcccattacctaaatgaattcgctcattcctaaaataaatgactaaaatgcctctacgcatgttaacatgcgt 19872140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 40517604 - 40517534
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcat 230  Q
    |||||||||||||| ||||||||| |||| |||||||||| |||||||| | |||| || |||||||||||    
T  40517604 tatgaattctgctctttacccaaacggtttcgctcattcctaaagtaaatgaccaagatacccctacgcat 40517534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 7665739 - 7665811
Alignment:
Q  169 tgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||| ||||||||| | ||||||||| ||||||||| | || |||||||| || |||||||||||||||    
T  7665739 tgctcatttcccaaatggattcgctcattcgcaaagtaaatgaccgaaatgcccttatgcatgttaacatgcg 7665811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 34082845 - 34082917
Alignment:
Q  169 tgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||| ||||||||  | |||||||| |||||||||| |  |||||||| ||||||||||||||||||||    
T  34082845 tgctcattgcccaaatgaattcgctcatttccaaagtaaatgatcaaaatgctcctacgcatgttaacatgcg 34082917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 39688802 - 39688739
Alignment:
Q  191 gctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||| ||||||||||||| ||||| ||||||| ||||||||| | |||||||||| ||||    
T  39688802 gctcattctcaaagtaaaagtcgaaaatacccctacacatgttaactttcgtagcgtgagttaa 39688739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 44430418 - 44430465
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  44430418 gaattctgctcattatccaaatggttttgctcattcccaaagtaaaag 44430465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 16931446 - 16931539
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||  ||||| ||  ||||| |||| |||||||| |||||| ||  | || |||||||||||||||||| ||||| ||||||    
T  16931446 gaattctgctcattattcaaatagtatcgctcgttcctaaagtaaatgtccaatatatctctgcgcatgttaacatgcgtaccgtgatttaagt 16931539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 260
Target Start/End: Complemental strand, 39649956 - 39649863
Alignment:
Q  167 tctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacg 260  Q
    ||||||||||||| ||||||||||| | |||| ||||||||| |  | |||||  | |||||| |||||||||||   ||||||||||||||||    
T  39649956 tctgctcattacctaaatggttccgtttattctcaaagtaaatgatcgaaatgttcatacgcaagttaacatgcgctacgtgacttaagtcacg 39649863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 42993567 - 42993644
Alignment:
Q  164 aattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||| |||| |||  ||  |||||||||||||||||||  ||| |||||||||| || |||||||||||||    
T  42993567 aattctgctcactacctaaagagtatcgctcattcccaaagtaaatttcctaaatgcccctgcgtatgttaacatgcg 42993644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 54529034 - 54528961
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||||||| ||||| ||||| ||  |||||||| ||| ||||| ||||||||| ||||||| |||||||||    
T  54529034 gaattctgctctttaccaaaatgattttgctcattctcaatgtaaatgtccaaaatacccctacacatgttaac 54528961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 35485242 - 35485321
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||||||| |||||  ||  |||||||||  |||||||| ||  ||||||||||| | ||||||||||||||    
T  35485242 tgaattctgctcattatccaaacagtatcgctcattcttaaagtaaatgtttaaaatgcccctgcacatgttaacatgcg 35485321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 39685212 - 39685259
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    ||||| |||||||||||||||||||| ||||||||  |||||||||||    
T  39685212 gaattttgctcattacccaaatggtttcgctcattttcaaagtaaaag 39685259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 3860889 - 3860826
Alignment:
Q  190 cgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||| ||||||||||||  |||| |||| |||| |||||||| |||||||||||| ||||    
T  3860889 cgctcattctcaaagtaaaagttgaaaacgccc-tacgtatgttaacttgcgtagcgtgagttaa 3860826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 35106039 - 35106003
Alignment:
Q  183 atggttccgctcattcccaaagtaaaagtccaaaatg 219  Q
    |||||||||||||||||||||||||| | ||||||||    
T  35106039 atggttccgctcattcccaaagtaaatgaccaaaatg 35106003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 39645772 - 39645852
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||| |||||||| | |||||| | || |||||| ||||||||| |  | |||||  ||||||||||||||||||||    
T  39645772 atgaattccgctcattatctaaatggattcgttcattcgcaaagtaaatgatcgaaatgttcctacgcatgttaacatgcg 39645852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 35060974 - 35060875
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacgc 261  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35060974 tgaattctgctcattacccaaatgattccgctcatttccaaagtaaatgtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacgc 35060875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 17436034 - 17436120
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgt 247  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  17436034 atgaattttgctcattattcaaatggttccgctcattcccaaagtaaaagtctaaaatgcctctacgcatgttaacttgcgtagcgt 17436120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 31522614 - 31522534
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgt 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||| |||||| |||||    
T  31522614 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaatgaccgaaatgcccctacgcaagttaacttgcgt 31522534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 14153354 - 14153432
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  14153354 gaattctgctcattacccaaatgattttgctcattcccaaagtaaatgaccaaaatacccctacgcatgttaacatgcg 14153432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 32275850 - 32275752
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacg 260  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| | |  ||||||||||| ||| |||||||||||   ||| ||||||||||||    
T  32275850 tgaattatgctcattatccaaatggttccgctcattcccaaagtaaatgactgaaatgcccctatgcaagttaacatgcgctacgttacttaagtcacg 32275752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 14154657 - 14154562
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||| ||||||||||||  |   |||||||||| ||| |||| |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  14154657 atgaattctgatcattacccaaaccgaatcgctcattcctaaaataaatgtccaaaatgtccctgcgcatgttaacatgtgtagcgtgacttaagt 14154562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 17436619 - 17436541
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||| | || ||||| |||||| ||||||||||||||    
T  17436619 gaattctgctcattacccaaatggattcgctcgttcccaaagtaaatgaccgaaatgtccctacacatgttaacatgcg 17436541  T

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Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 32274184 - 32274262
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||| |||||||| ||||||||| | ||||||||||||||||||| |  | |||||||||||||||||||||||||||    
T  32274184 gaattatgctcattgcccaaatggattcgctcattcccaaagtaaatgatcgaaatgcccctacgcatgttaacatgcg 32274262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 4321815 - 4321723
Alignment:
Q  164 aattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||| |||| ||| ||||||||  ||||||||| |  ||||||||| ||||||| ||||||||||||  ||||||||||||    
T  4321815 aattctgctcattacctaaatagtttcgctcattttcaaagtaaatgatcaaaatgcctctacgcaagttaacatgcgttacgtgacttaagt 4321723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 23608427 - 23608500
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    |||||||||||||||  |||||| ||||| ||||||||||| |||||||| |||||  ||||||||||||||||    
T  23608427 gaattctgctcattattcaaatgattccgttcattcccaaaataaaagtctaaaatatccctacgcatgttaac 23608500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 14830419 - 14830470
Alignment:
Q  190 cgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||    
T  14830419 cgctcattcccaaagtaaatgtccaaaatgtccctacacatgttaacatgcg 14830470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Original strand, 25400850 - 25400928
Alignment:
Q  180 caaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtca 258  Q
    |||||||||||||||||| |||||||||| || |||||| |||||||| |  |||| ||||||  ||| ||||||||||    
T  25400850 caaatggttccgctcatttccaaagtaaatgttcaaaatacccctacgtaacttaagatgcgttacgttacttaagtca 25400928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 806545 - 806618
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||||||| |||||||||  |||  |||||||| ||||||||| ||| ||||| | |||||| ||||||||    
T  806545 gaattctgctctttacccaaacagttttgctcattctcaaagtaaatgtctaaaatactcctacgtatgttaac 806618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 14430944 - 14431017
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||||||  ||||| ||| ||||| ||||||| | |||||||| ||  |||||| ||||||||||||||||    
T  14430944 gaattctgctatttacctaaacggttctgctcatttctaaagtaaatgtttaaaatgtccctacgcatgttaac 14431017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 241
Target Start/End: Original strand, 31483693 - 31483721
Alignment:
Q  213 caaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||||||||||||||||||||    
T  31483693 caaaatgcccctacgcatgttaacatgcg 31483721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 33164584 - 33164490
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33164584 tgaattctgctcattacccaaatggttccgctcattctcaaagtaaatgtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 33164490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 36172165 - 36172258
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| | |||||||||||||| | |||||||||||    
T  36172165 gaattctgctcattacccaaatagttccactcattcccaaagtaaaagtccaaaatacccctatgtatgttaacatgcgtggtgtgacttaagt 36172258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 34235783 - 34235684
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacgc 261  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| | || |||||||| ||||||||||||||||| | | ||||||||| ||||||    
T  34235783 tgaattatgctcattacccaaatggttccgctcattcctaaagtaaatgaccgaaatgcccatacgcatgttaacatgcattgtgtgacttaaatcacgc 34235684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 36217870 - 36217961
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||| |||| |||||||||   ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  36217870 gaattctgctctttactcaaatggttttactcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacttacgtagcgtgagttaa 36217961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 256
Target Start/End: Original strand, 51718172 - 51718267
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||| || |||||||||| ||||||| |||||||||||||||||||||| ||||||||||||| ||  |||||||| ||||||||||||||||    
T  51718172 atgaattatgttcattacccagatggttctgctcattcccaaagtaaaagtcgaaaatgcccctacacaacttaacatgtgtagcgtgacttaagt 51718267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 28798223 - 28798130
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||||||||  ||  ||||||||| ||||||||| ||||||||||||||| | |||||||||||| |||| |||||||||||    
T  28798223 gaattctgctcattacccaaacagtatcgctcattctcaaagtaaatgtccaaaatgcccctgcacatgttaacatgtgtagtgtgacttaagt 28798130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 46817513 - 46817412
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcac 259  Q
    ||||||||||||||||||||  ||  ||  |||||||||  |||||||| || |||||||||||||||||||||||||||||  ||||||||||||||||    
T  46817513 tatgaattctgctcattacctgaacagtatcgctcattcttaaagtaaatgttcaaaatgcccctacgcatgttaacatgcgctgcgtgacttaagtcac 46817414  T
Q  260 gc 261  Q
    ||    
T  46817413 gc 46817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 40450931 - 40451022
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||||| |||  ||  ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||| ||||    
T  40450931 gaattctgctcattacctaaacagtatcgctcattcccaaagtaaaagtcgaaaatgcccctacgcatgttaacttgtgtagcttgagttaa 40451022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 36174649 - 36174579
Alignment:
Q  171 ctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  36174649 ctcattactcaaatggtttcactcattcccaaagtaaaaatccaaaatgccactacgcatgttaacatgcg 36174579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 53267879 - 53267786
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||||| || || |||||||||||| |||||| |||||||||| || || | || |||||||||||||||||| |||||||||||||||||    
T  53267879 gaattctgcacaatatccaaatggttccactcatttccaaagtaaatgttcatattgtccctacgcatgttaacatacgtagcgtgacttaagt 53267786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 24972389 - 24972481
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||||| |||  ||  |||||||||| |||||||||||| ||||  ||||||||||||||||| |||||||||||| ||||    
T  24972389 tgaattctgctcattacctaaacagtatcgctcattcctaaagtaaaagtcaaaaacacccctacgcatgttaacttgcgtagcgtgagttaa 24972481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 24974221 - 24974146
Alignment:
Q  166 ttctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||| |||||||| |  |||||||||||||||||| | || |||||||||||||||||||||||||||    
T  24974221 ttctgctcattatccaaatggatttgctcattcccaaagtaaatgaccgaaatgcccctacgcatgttaacatgcg 24974146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 36498906 - 36498997
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||| ||||  ||  ||||||||||||||||||||||  |||||||||||| |||||||||| ||| |||||||| ||||    
T  36498906 gaattctgctcattactcaaacagtatcgctcattcccaaagtaaaagttgaaaatgcccctatgcatgttaacttgcatagcgtgagttaa 36498997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 161 - 254
Target Start/End: Original strand, 12586182 - 12586276
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtc-caaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||||||| |||   | ||||||||||||||||||||||||  |||||||||||| |||||||||| ||| |||||||| ||||    
T  12586182 atgaattctgctcattacctaaacaataccgctcattcccaaagtaaaagtcgaaaaatgcccctatgcatgttaacttgcatagcgtgagttaa 12586276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 42099577 - 42099511
Alignment:
Q  190 cgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||| |||||||||| ||||||||| | ||| |||||||||||||||||||||||||||||||    
T  42099577 cgctcatttccaaagtaaatgtccaaaatacacctgcgcatgttaacatgcgtagcgtgacttaagt 42099511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 53265809 - 53265870
Alignment:
Q  180 caaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||| |||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  53265809 caaatggtttcgctcattcctaaagtaaaattccaaaatgctcctacgcatgttaacatgcg 53265870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 40312874 - 40312794
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||| |||||||||||||||||||| || |||||||| |||||||||||||| ||||| | | |||| |||||||||||||    
T  40312874 atgatttctgctcattacccaaatgatttcgctcatttccaaagtaaaagtctaaaatactcttacgtatgttaacatgcg 40312794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 40322950 - 40322870
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||| |||||||||||||||||||| || |||||||| |||||||||||||| ||||| | | |||| |||||||||||||    
T  40322950 atgatttctgctcattacccaaatgatttcgctcatttccaaagtaaaagtctaaaatactcttacgtatgttaacatgcg 40322870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 36501940 - 36501865
Alignment:
Q  166 ttctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||||||| |||| | ||||||||||||||||||| |  | ||||||||||||||||||| |||||||    
T  36501940 ttctgctcattacccagatggattcgctcattcccaaagtaaatgatcgaaatgcccctacgcatgttgacatgcg 36501865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 628085 - 628135
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  628085 tatgaattctgctcattacccaaatggtttcgctcattcctaaagtaaaag 628135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 12572898 - 12572807
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgactta 253  Q
    |||||||||||||| | |||||  ||  || |||||| ||||||||| ||||||||||||||| |||||||||| |||| || |||||||||    
T  12572898 tgaattctgctcatcatccaaacagtatcgttcattctcaaagtaaatgtccaaaatgcccctgcgcatgttaatatgcatatcgtgactta 12572807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 45247059 - 45246962
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacg 260  Q
    ||||| |||||||||  |||||||||||| ||||| | |||||||| |  ||||||| ||||||| |||||||||||||   | ||||||||||||||    
T  45247059 gaattatgctcattattcaaatggttccgttcatttctaaagtaaatgatcaaaatgtccctacgtatgttaacatgcgctacatgacttaagtcacg 45246962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 55523725 - 55523798
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||||||||||| |||||   |  ||||||||  ||||||||||||| |||||||||||||||||||||||    
T  55523725 gaattctgctcattatccaaacattatcgctcattttcaaagtaaaagtcgaaaatgcccctacgcatgttaac 55523798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 636662 - 636571
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||| |||||||||||||||  ||  |||| ||| ||||||||||| |  ||||||||| | ||||||||||| |||||||||||| ||||    
T  636662 gaattatgctcattacccaaacagtatcgcttatttccaaagtaaaaattgaaaatgcccatgcgcatgttaacttgcgtagcgtgagttaa 636571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 55527992 - 55527917
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaaca 237  Q
    ||||||||||||||||   |||||| | |||||||| |||||| ||| | || |||||||||||||||||||||||    
T  55527992 tgaattctgctcattatttaaatggattcgctcatttccaaagcaaatgaccgaaatgcccctacgcatgttaaca 55527917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 12586875 - 12586798
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||| ||||||||| ||||||| | |||||||| ||||| |||| | || ||||| |||||||||||||||||||||    
T  12586875 gaattcagctcattactcaaatggattcgctcatttccaaa-taaatgaccgaaatgtccctacgcatgttaacatgcg 12586798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 23283211 - 23283292
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||| ||||  ||||| ||| |||| ||| |||||||||| | || ||||||||||| ||| |||||||||||    
T  23283211 tatgaattctgctgattattcaaatagtttcgcttatttccaaagtaaatgaccgaaatgcccctatgcaagttaacatgcg 23283292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 38676939 - 38677012
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||| ||| ||| ||||| ||||  ||||||||||||| |||| ||||||||| || ||||||||||||||    
T  38676939 gaattctcctctttatccaaacggttttgctcattcccaaaataaatgtccaaaatacctctacgcatgttaac 38677012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 40923406 - 40923467
Alignment:
Q  193 tcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||| |||||||||||||  |||||||||||||| |||||||| ||||||| |||| ||||    
T  40923406 tcatttccaaagtaaaagtaaaaaatgcccctacgtatgttaacttgcgtagagtgagttaa 40923467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 40923966 - 40923925
Alignment:
Q  169 tgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  40923966 tgctcattacccaaatggtttcgctcattcctaaagtaaaag 40923925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 27992116 - 27992188
Alignment:
Q  164 aattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    |||| |||||||||  ||||||| |  |||||||||||||||||| | || ||||||||||| ||||||||||    
T  27992116 aattatgctcattattcaaatggatttgctcattcccaaagtaaatgaccgaaatgcccctaagcatgttaac 27992188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 45237409 - 45237489
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||||||||| ||||||| | |||| ||| | ||||||||   |  ||||||||||| |||||||||||||||    
T  45237409 atgaattctgctcattactcaaatggattcgcttatttctaaagtaaataactgaaatgcccctatgcatgttaacatgcg 45237489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 51719852 - 51719773
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgt 242  Q
    |||||||||| ||||||||||||| | |||| ||| ||||||||||   || |||| |||||||| | ||||||||||||    
T  51719852 gaattctgcttattacccaaatggattcgcttatttccaaagtaaataaccgaaatacccctacgtaagttaacatgcgt 51719773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 28796620 - 28796694
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaaca 237  Q
    |||||||||||||||||||||   |  ||||||||| ||||||||| |||||||||| || |  |||||||||||    
T  28796620 gaattctgctcattacccaaacaatatcgctcattctcaaagtaaatgtccaaaatgtccatgtgcatgttaaca 28796694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 37576543 - 37576641
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacgc 261  Q
    ||||||||||||||||||||| ||||  |||| || |||||||||| ||||| | | ||||||||   |||||| ||||   | |||||||||||||||    
T  37576543 gaattctgctcattacccaaacggttttgctcgtttccaaagtaaatgtccatattacccctacgtgagttaacttgcgctacatgacttaagtcacgc 37576641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 38677740 - 38677654
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtga 249  Q
    ||||||||||| ||||||||| | ||  | ||||||||||||||||  | ||||||  |||| ||||||||||| | ||||||||||    
T  38677740 gaattctgctctttacccaaacgattttgttcattcccaaagtaaatattcaaaatatccctgcgcatgttaacttacgtagcgtga 38677654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 27992382 - 27992309
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||| || ||||||||||||||| |  ||||||| | ||| |||| ||||||||| |||||| ||||||||||    
T  27992382 gaattatgttcattacccaaatggatttgctcatttctaaaataaatgtccaaaatacccctatgcatgttaac 27992309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 37577320 - 37577271
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    ||||||||||||||||| ||||||  || |||||||||| ||||||||||    
T  37577320 atgaattctgctcattatccaaataatttcgctcattcctaaagtaaaag 37577271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 54208180 - 54208253
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||| ||||| ||| ||||||||||  |||||||||||||||||| |  |||||| ||||||| || ||||||    
T  54208180 gaattatgctctttatccaaatggttttgctcattcccaaagtaaatgatcaaaatacccctactcaagttaac 54208253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 47044067 - 47043991
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatg 239  Q
    ||||| |||||||||| ||||  ||  || ||||||| ||||||||  | |||||||||||| ||||||||||||||    
T  47044067 gaattttgctcattactcaaactgtatcgttcattcctaaagtaaatattcaaaatgcccctgcgcatgttaacatg 47043991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 12969340 - 12969249
Alignment:
Q  164 aattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12969340 aattctgctcattatctaaatggttccgctcattcc-aaagtaaaagttcaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 12969249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 18387240 - 18387334
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||    
T  18387240 tgaattctgctcattactcaaatggttctgctcattcccaaagtaaatatcaaaaatgcccttacgcatgttaacatgcgtagcgtgacttaagt 18387334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 37893087 - 37892995
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||| ||||    
T  37893087 tgaattctgctaattacccaaatggtttcgctcattcccaaagtaaaagtccaaaatgcccctatgcatgttaacttacgtagcgtgagttaa 37892995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 8273245 - 8273324
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgt 242  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  8273245 gaattctgctcattacccaaatggattcgctcattcccaaagtaaatgaccgaaatgcccctacgcatgttaacatgcgt 8273324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 11712961 - 11713036
Alignment:
Q  166 ttctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11712961 ttctgctcattacctagatggtttcgctcattcccaaagtaaaagtccaaaatgcccctacgtatgttaacatgcg 11713036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 12967270 - 12967349
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagt-aaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  12967270 gaattctgctcattacctaaatggttccgctcattctcaaagtaaaaagtccaaaatacccctacgcatgttaacatgcg 12967349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 11573632 - 11573724
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||||||||||   |  ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||    
T  11573632 tgaattctgctcattacccaaacaatatcgctcattcccaaagtaaaagtcaaaaatgcccctacgtatgttaacttgcgtagcgtgagttaa 11573724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 42119191 - 42119250
Alignment:
Q  197 tcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  42119191 tcccaaagtaaatgtccaaaatgcccctacgcatgttaacatgtgtagcgtgacttaagt 42119250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 20685006 - 20685070
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacg 227  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| ||||    
T  20685006 gaattctgctcattacccaaatggttccgctcattctcaaagtaaaagtctaaaatacccttacg 20685070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 939559 - 939650
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||  |||||| |||||||||||||||| ||||| |||||||||||||| | |||  ||||| || ||||||||| ||||    
T  939559 gaattctgctcattattcaaatgattccgctcattcccaatgtaaatgtccaaaatgccccaatgcaacttaacttgtgtagcgtgagttaa 939650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 22492476 - 22492539
Alignment:
Q  193 tcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||| || |||||||||||| ||||| |||||||| ||||||||||||||||    
T  22492476 tcattcccaaagtaaatgttcaaaatgcccctgcgcatattaacatgtgtagcgtgacttaagt 22492539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 20686881 - 20686819
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccct 224  Q
    |||||||||||| |||  |||||| ||||||||||||| ||||||||||||||||||||||||    
T  20686881 tgaattctgctcgttattcaaatgtttccgctcattcctaaagtaaaagtccaaaatgcccct 20686819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 18395051 - 18394970
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||||||||||   |  ||||||||||||||||||  |||||||||||| ||  |||||||||||||||    
T  18395051 tatgaattctgctcattacccaaacaatatcgctcattcccaaagtaattgtccaaaatgcctctgtgcatgttaacatgcg 18394970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 24928686 - 24928749
Alignment:
Q  191 gctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||||||||| ||||||| ||||  ||||||||| |||||||||||| ||||    
T  24928686 gctcattcccaaagtaaaagtcgaaaatgctcctaaacatgttaacttgcgtagcgtgagttaa 24928749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 8277452 - 8277394
Alignment:
Q  177 acccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaa 235  Q
    |||||||||||||||||||||||||||||||| | || |||||||| |||||| |||||    
T  8277452 acccaaatggttccgctcattcccaaagtaaatgaccgaaatgcccttacgcaagttaa 8277394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 22496154 - 22496076
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||| ||||||||||| |||| ||  ||||||||  ||||||||| ||| ||||||||| ||||||||||||||||||    
T  22496154 gaattatgctcattacctaaatagtatcgctcattttcaaagtaaatgtctaaaatgcccttacgcatgttaacatgcg 22496076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 2154262 - 2154339
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgc 240  Q
    |||||||||||||||||||||   |  |||||||||||||||||||||  ||||||| |||||||||  |||||||||    
T  2154262 gaattctgctcattacccaaacaatatcgctcattcccaaagtaaaagatcaaaatgtccctacgcaacttaacatgc 2154339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 24929412 - 24929364
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  24929412 tgaattctgctcattaccaaaatggtttcgctgattcccaaagtaaaag 24929364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 25678272 - 25678363
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||| |||||  ||  ||||||||  ||||||||||||| ||||||| ||||  ||||||||| |||||||| ||| ||||    
T  25678272 gaattctgctcattatccaaacagtatcgctcattttcaaagtaaaagtcaaaaatgctcctaaacatgttaacttgcgtagcatgagttaa 25678363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 31133179 - 31133277
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacgc 261  Q
    ||||||||||| ||||||||||  || ||||||||   |||||||| |||  |||||||||||| || |||||||||||   |||||||||| ||||||    
T  31133179 gaattctgctctttacccaaatcatttcgctcatttttaaagtaaatgtcataaatgcccctacacaagttaacatgcgctacgtgacttaactcacgc 31133277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 22788063 - 22787999
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacg 227  Q
    ||||||||||| |||||||||||| |  | |||||||||||||||| | ||||||| ||||||||    
T  22788063 gaattctgctctttacccaaatggatttgttcattcccaaagtaaatgaccaaaatacccctacg 22787999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Complemental strand, 25678967 - 25678919
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    |||| ||||||||||||| |||||||| |||| ||||||||||||||||    
T  25678967 tgaagtctgctcattaccaaaatggtttcgctgattcccaaagtaaaag 25678919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 25389929 - 25389869
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgccc 222  Q
    |||||||||||| |||| ||||||| |  |||||||| ||||||||| | |||||||||||    
T  25389929 tgaattctgctctttactcaaatggatttgctcattctcaaagtaaatgaccaaaatgccc 25389869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 33220867 - 33220786
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgt 242  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33220867 atgaattctgctcattacccaaatggtttcactcattcccaaagtaaaagttcaaaatgcccctacgcatgttaacatgcgt 33220786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 23559061 - 23558970
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  23559061 gaattctgctcattatccaaatggttccgctcattgccaaggtaaaagtccaaaatgcccctacgcatgttaacttacgtagcgtgagttaa 23558970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 256
Target Start/End: Complemental strand, 43641053 - 43640958
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||| |  |||| ||||||||||||||||||| || ||||||||||||||||    
T  43641053 atgaattctgctcattacccaaatggtttggctcatttccaaagtaaatgatcaaattgcccctacgcatgttaacttgtgtagcgtgacttaagt 43640958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 5967315 - 5967237
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |  | |||||||||||||||||||||||||||    
T  5967315 gaattctgctcattacccaaatggattcgctcattcccaaagtaaatgatcgaaatgcccctacgcatgttaacatgcg 5967237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 9384617 - 9384707
Alignment:
Q  164 aattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||  ||||||||||||||||||  |||| |||| |||||||||| |||||||||  |||||||||||||||||| ||||    
T  9384617 aattctgctcattattcaaatggttccgctcattttcaaaataaatgtccaaaatgtccctacgcaacttaacatgcgtagcgtgagttaa 9384707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 33800549 - 33800483
Alignment:
Q  190 cgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||| |||||||| ||| ||||||||| | |||||||||||||||||||||||||||||||    
T  33800549 cgctcattcctaaagtaaatgtctaaaatgcccttgcgcatgttaacatgcgtagcgtgacttaagt 33800483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 9418585 - 9418634
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9418585 atgaattctgctcattacccaaatggtttcgctcattcccaaagtaaaag 9418634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 37687392 - 37687335
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaat 218  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||    
T  37687392 atgaattctgcttattacccaaatggttccgctcatttccaaagtaaatgtccaaaat 37687335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 34276191 - 34276283
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||||||||||   |  |||| ||| |||||||||||||  |||||||||||| |||||||||| |||||||||||| ||||    
T  34276191 tgaattctgctcattacccaaacaatatcgcttatttccaaagtaaaagtaaaaaatgcccctatgcatgttaacttgcgtagcgtgagttaa 34276283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 34279640 - 34279560
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgt 242  Q
    |||||||||||||||||  |||||| | |||||||||| |||||||| |  | |||||||||||| |||||||||||||||    
T  34279640 tgaattctgctcattacttaaatggattcgctcattcctaaagtaaatgatcgaaatgcccctacacatgttaacatgcgt 34279560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 4640874 - 4640795
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||||||||  ||  |||||||| |||||||||||| | ||||||||||||| ||  ||||||||||    
T  4640874 tgaattctgctcattacccaaactgtatcgctcatttccaaagtaaaagactaaaatgcccctacacaacttaacatgcg 4640795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 223
Target Start/End: Complemental strand, 9448769 - 9448715
Alignment:
Q  169 tgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccc 223  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||    
T  9448769 tgctcattatccaaatggtttcactcattctcaaagtaaaagtccaaaatgcccc 9448715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 33220021 - 33220078
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaat 218  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||| || ||||||    
T  33220021 tatgaattctgctcattatccaaatggttccgctcatt-ccaaagtaaatgttcaaaat 33220078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 43635129 - 43635208
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||| ||||| |||||||||||| | ||| | |||||||| ||| | | ||||| ||||||||||||||||||    
T  43635129 tgaattctgcttattactcaaatggttccgtttatttctaaagtaaatgtctatattgcccgtacgcatgttaacatgcg 43635208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 37686616 - 37686693
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgc 240  Q
    ||||||| ||| |||||||||| ||| || |||||||||||||||||||| |||||| || | ||||  |||||||||    
T  37686616 gaattctcctctttacccaaatcgtttcgttcattcccaaagtaaaagtctaaaatggccttgcgcaacttaacatgc 37686693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 31762240 - 31762286
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaa 208  Q
    ||||||||||||||||  ||||||| | |||||||||||||||||||    
T  31762240 tgaattctgctcattattcaaatggattcgctcattcccaaagtaaa 31762286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 43995919 - 43995969
Alignment:
Q  174 attacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccct 224  Q
    |||||| ||||||||||||||||| | |||||||||||| ||||| |||||    
T  43995919 attacctaaatggttccgctcatttctaaagtaaaagtcgaaaatacccct 43995969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 1474 - 1570
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtca 258  Q
    ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||    
T  1474 tgaattctgctcattacccaaatggttccgctcatttttaaagtaaaagtccaaaatgcccctgcgcatgttaacatgcgttacgtgagttaagtca 1570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 20379746 - 20379653
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||||||||||    
T  20379746 gaattatgctcattatctaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcaacttaatatgcatagcgtgacttaagt 20379653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 26604248 - 26604160
Alignment:
Q  166 ttctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||| | |||||||||| ||||    
T  26604248 ttctgctcattactcaaatggttccgctcattctcaaagtaaaagtttaaaatgcccctacgcatgttaacttacgtagcgtgagttaa 26604160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 38790884 - 38790974
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattc-ccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  38790884 gaattctgctcattatccaaatggtttcgctcattttccaaagtaaaagtccaaaatacccctacgcatgttaacatgc--agcgtgacttaa 38790974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 5247 - 5172
Alignment:
Q  166 ttctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||||||| | ||||||||||||||||||| | || |||||||||||||||||||||||||||    
T  5247 ttctgctcattacccaaatggattcgctcattcccaaagtaaatgaccgaaatgcccctacgcatgttaacatgcg 5172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 38792126 - 38792033
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||| |||||||| ||||||||| | ||||||| ||||||||||||| ||||| ||||||| | || ||||||||||||||||||||||||    
T  38792126 gaattctactcattactcaaatggtttcactcattctcaaagtaaaagtctaaaatacccctacacttgataacatgcgtagcgtgacttaagt 38792033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 44552780 - 44552689
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||||||||   |  ||||||||| ||||||||||||| ||||||| ||||||||||||||| |||||| ||||| ||||    
T  44552780 gaattctgctcattacccaaacaatatcgctcattctcaaagtaaaagtcgaaaatgctcctacgcatgttaacttgcgtaacgtgagttaa 44552689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 193 - 256
Target Start/End: Complemental strand, 48221746 - 48221683
Alignment:
Q  193 tcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||||||    
T  48221746 tcattcccaaagtaaatgtccaaaatacccctacgcatgctaacatgtgtagcgtgacttaagt 48221683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 31823589 - 31823682
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||||||||   |  |||||||||||||| ||||  |||||||||||||| | ||||||||||||||| |||| ||||||||    
T  31823589 gaattctgctcattacccaaacaatatcgctcattcccaaaataaatatccaaaatgcccctgcacatgttaacatgcgttgcgtaacttaagt 31823682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 1537325 - 1537246
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||||||||  ||  || |||||| ||||||||| || |||||||||||| ||||||||||||||||    
T  1537325 tgaattctgctcattacccaaacagtatcgttcattctcaaagtaaatgttcaaaatgcccctgcgcatgttaacatgcg 1537246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 30359704 - 30359788
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtg 248  Q
    |||||||||||| ||||||||   |||||||||||||||||||||||||||||||| | ||||| || ||||||| | |||||||||    
T  30359704 tgaattctgctctttacccaac--gttccgctcattcccaaagtaaaagtccaaaacgtccctatgcttgttaacttacgtagcgtg 30359788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 218
Target Start/End: Original strand, 42548161 - 42548216
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaat 218  Q
    |||||||||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  42548161 gaattctgctcattacccaaatcgttttgctcattcccaaagtaaaagtccaaaat 42548216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 5060848 - 5060905
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgc 220  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  5060848 gaattctactcattatccaaatggttccgctcattcccaaagtaaaagttgaaaatgc 5060905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 19365473 - 19365395
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||| |||||| | ||||||||||||||  ||| | || |||| ||||||||||| ||||||||||    
T  19365473 gaattctgctcattacctaaatggattcgctcattcccaaataaaatgaccgaaatacccctacgcattttaacatgcg 19365395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 26502509 - 26502431
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||| ||||| ||| | |||||||| ||||||||| ||||||||||||||||||||| ||||| ||| | ||||||||    
T  26502509 gaattatgctccttatctaaatggtttcgctcattctcaaagtaaaagtccaaaatgcgcctacacatttcaacatgcg 26502431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 26590205 - 26590283
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||| ||||| ||| | |||||||| ||||||||| ||||||||||||||||||||| ||||| ||| | ||||||||    
T  26590205 gaattatgctccttatctaaatggtttcgctcattctcaaagtaaaagtccaaaatgcgcctacacatttcaacatgcg 26590283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 38386178 - 38386252
Alignment:
Q  167 tctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||| |||||||| | |||||||| |||||||||| |    |||||||||||||||||||||||||||    
T  38386178 tctgctcattatccaaatggattcgctcatttccaaagtaaatgattgaaatgcccctacgcatgttaacatgcg 38386252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 25428731 - 25428792
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccct 224  Q
    ||||| ||||| ||||||||| ||||| ||||||||||||||||||  ||||||||||||||    
T  25428731 gaattttgctctttacccaaacggttctgctcattcccaaagtaaatatccaaaatgcccct 25428792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 41957005 - 41957079
Alignment:
Q  166 ttctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||| |||||||||| ||||| |||||||| ||||| |||||||||||||| ||| || | |||||||||||||    
T  41957005 ttctgcacattacccaa-tggtttcgctcatttccaaaataaaagtccaaaatacccataagtatgttaacatgcg 41957079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 26009369 - 26009455
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtga 249  Q
    ||||||||||| ||||||||| | ||  |||||||||||||||||| | |||||||   |||||||||||||||   ||||||||||    
T  26009369 gaattctgctctttacccaaacgattttgctcattcccaaagtaaatgaccaaaatattcctacgcatgttaactcacgtagcgtga 26009455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 28138759 - 28138820
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccct 224  Q
    ||||||||||| ||||||||||| ||  |||||||||||||||||| | ||||||| |||||    
T  28138759 gaattctgctctttacccaaatgattttgctcattcccaaagtaaatgaccaaaatacccct 28138820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 5061809 - 5061730
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatg 239  Q
    ||||||||||||||||||||||||||| | | |||||| ||||| |||| |  | ||||| |  ||||||||||||||||    
T  5061809 tatgaattctgctcattacccaaatggattcactcatttccaaaataaatgaacgaaatgtcgttacgcatgttaacatg 5061730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 10527062 - 10526964
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacgc 261  Q
    ||||||||||| |||||||||||| | |  |||||||||||||||| ||||||| ||||  | || | ||||||||| ||  | ||| |||||||||||    
T  10527062 gaattctgctctttacccaaatggattcaatcattcccaaagtaaatgtccaaattgcctttgcgtaagttaacatgtgttacctgagttaagtcacgc 10526964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 42548839 - 42548781
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatg 219  Q
    ||||||||||||| |  ||||||||||| ||||||||  ||||||||||| ||||||||    
T  42548839 atgaattctgctcttcccccaaatggtttcgctcattttcaaagtaaaagaccaaaatg 42548781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 28139513 - 28139452
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccct 224  Q
    ||||||||||  |||||||||||| |  || ||||||||||||||| | |||||||||||||    
T  28139513 gaattctgctttttacccaaatggatttgcccattcccaaagtaaatgaccaaaatgcccct 28139452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 31853352 - 31853315
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcatt 197  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  31853352 tatgaattctgctcattatccaaatagttccgctcatt 31853315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 28442918 - 28443013
Alignment:
Q  159 ctatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| || ||||||||| ||||    
T  28442918 ctatgacttctgctcattaatcaaatggttccgctcattcccaaagtaaaagttgaaaatgcccctacgcatgttaacttgtgtagcgtgagttaa 28443013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 39650195 - 39650274
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  39650195 tgaattctgctcattacctaaatggtttcgctcattcctaaagtaaatgtccaaaatgcccctacgcatgttaacatgcg 39650274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 45688308 - 45688385
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgc 240  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45688308 gaattccgctcattatccaaatggttctgctcattcccaaagtaaaagttcaaaatgcccctacgcatgttaacatgc 45688385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 3792559 - 3792635
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacat 238  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| |||||||||||||||    
T  3792559 tgaattctgctcattacccaaatagtttcgctcatttccaaagtaaaagtccaaaatgcccttacgcatgttaacat 3792635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 45691126 - 45691050
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatg 239  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45691126 gaattttgctcattactcaaatggtttcgctcattcccaaagtaaaagtccaaaatgcccctacacatgttaacatg 45691050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 28476060 - 28475963
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacg 260  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |  | |||||||||||| ||||||||||||||    |||||||||||||||    
T  28476060 gaattctgctcattacccaaatggttccgctcattctcaaagtaaatgatcgaaatgcccctacacatgttaacatgcgctatgtgacttaagtcacg 28475963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 256
Target Start/End: Complemental strand, 50069312 - 50069219
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||||||||  |   ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||||    
T  50069312 gaattctgctcattacccaaacagcatcgctcattcccaaagtaaatgtccaaaatgcccctgcgcatgttaacatacgtagcgtgagttaagt 50069219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 45691268 - 45691196
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaa 235  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  45691268 gaattttgctcattactcaaatggtttcgctcattcccaaagtaaaagtccaaaatgcccctacacatgttaa 45691196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 45691410 - 45691338
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaa 235  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  45691410 gaattttgctcattactcaaatggtttcgctcattcccaaagtaaaagtccaaaatgcccctacacatgttaa 45691338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 11821158 - 11821233
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||| |||| ||||||||||    
T  11821158 atgaattctgctcattatccaaatggtttcgttcattcccaaagtaaaagtccaaaatgctcctatgcatgttaac 11821233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 28446610 - 28446530
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  28446610 atgaattttgctcattacccaaatggattcgctcattcccaaagtaaatgactgaaatgcccctacgcatgttaacatgcg 28446530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 33403204 - 33403113
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||| |||||||||||||||  ||  |||||||| |||||||||||||| ||||||||||||||||||||||| |||||| ||||| ||||    
T  33403204 gaattatgctcattacccaaacagtatcgctcatttccaaagtaaaagtcgaaaatgcccctacgcatgttaacttgcgtaacgtgagttaa 33403113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 49033808 - 49033725
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgt 247  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| |||| ||||||| |||||||  ||||| ||||||||||    
T  49033808 gaattctgctcattattcaaatggttccgctcattcccaaagtaaatgtcc-aaatgcctctacgcaatttaacttgcgtagcgt 49033725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 33617644 - 33617722
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||| |||||||||||||||||| | ||||||||| ||||||||| | || ||||||||||| |||||||||||||||    
T  33617644 gaattatgctcattacccaaatggattcgctcattctcaaagtaaatgaccgaaatgcccctatgcatgttaacatgcg 33617722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 28474792 - 28474869
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgc 240  Q
    |||||||||||||||||||||||| | | |||||||||||| |||| | |  ||||||||||||||||||||||||||    
T  28474792 gaattctgctcattacccaaatggattcactcattcccaaaataaatgactgaaatgcccctacgcatgttaacatgc 28474869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 35577575 - 35577511
Alignment:
Q  190 cgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||| |||||||||||| ||||    
T  35577575 cgctcattcccaaagtaaaagtcgaaaatgcccctacatatgttaacttgcgtagcgtgagttaa 35577511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 48025556 - 48025647
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||| ||||| |||||||||  ||  ||||||||||||||||| ||||  ||||||||| ||||||||||||| |||||||||||| ||||    
T  48025556 gaattatgctcgttacccaaacagtatcgctcattcccaaagtagaagttgaaaatgcccttacgcatgttaacttgcgtagcgtgagttaa 48025647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 2094441 - 2094367
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||||||||||||||||||| |||| ||||||| |||||||||| ||| |||||  |||||||||| |||||    
T  2094441 tgaattctgctcattacccaaattgttctgctcatttccaaagtaaatgtctaaaatatccctacgcatattaac 2094367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 3792532 - 3792454
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatg-cccctacgcatgttaacatgc 240  Q
    ||||| ||||||||| |||||||||| |||||||| |||| |||||||||||||||| ||| ||| |||||||||||||    
T  3792532 gaattatgctcattatccaaatggtttcgctcatttccaacgtaaaagtccaaaatgtcccatacacatgttaacatgc 3792454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 50065476 - 50065555
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgc 240  Q
    ||||||||| ||||||||| ||||||   ||||||||||||||||||| | || ||||||| || |||||||||||||||    
T  50065476 atgaattctactcattaccaaaatggaatcgctcattcccaaagtaaatgaccgaaatgcctctgcgcatgttaacatgc 50065555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 5602943 - 5603005
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccct 224  Q
    |||||||||||| |||||||||||| |  |||||||||||||||||| | |||||||||||||    
T  5602943 tgaattctgctctttacccaaatggatttgctcattcccaaagtaaatgaccaaaatgcccct 5603005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 37260991 - 37260918
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||| ||||| ||||||||| ||||  || ||||| ||||||||| |||||||||||||||| ||||||||||    
T  37260991 gaattatgctctttacccaaacggttttgcccattctcaaagtaaatgtccaaaatgcccctatgcatgttaac 37260918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 241
Target Start/End: Original strand, 35563532 - 35563583
Alignment:
Q  190 cgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  35563532 cgctcattcccaaagtaaatgactgaaatgcccctacgcatgttaacatgcg 35563583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 33401408 - 33401486
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||| |||||||||  ||||||| | ||||||||| ||||||||| | || |||||||| || |||||||||||||||    
T  33401408 gaattttgctcattagtcaaatggattcgctcattctcaaagtaaatgaccgaaatgcccttatgcatgttaacatgcg 33401486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 35392183 - 35392109
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    |||| ||||||| |||||||||| |||  |||||||||||||||||| || |||||| |  ||||||||||||||    
T  35392183 tgaactctgctctttacccaaattgttttgctcattcccaaagtaaatgttcaaaatacttctacgcatgttaac 35392109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 35563363 - 35563438
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||||    ||||| | ||||||||||||||||||| | |  |||||||||| ||||||||||||||||    
T  35563363 tgaattctgctcatta----aatggattcgctcattcccaaagtaaatgactgaaatgcccctgcgcatgttaacatgcg 35563438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 35391487 - 35391548
Alignment:
Q  175 ttacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||| |||||||| || |||||||||||||||| ||||||||| | | |||||||||||||    
T  35391487 ttacctaaatggtttcgttcattcccaaagtaaatgtccaaaatactcatacgcatgttaac 35391548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 3792296 - 3792360
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacg 227  Q
    ||||||||||||||||||||||| |||  ||||||| |||| |||| ||||||||| ||| ||||    
T  3792296 gaattctgctcattacccaaatgattctactcattctcaaaataaatgtccaaaatacccttacg 3792360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 45688382 - 45688419
Alignment:
Q  217 atgcccctacgcatgttaacatgcgtagcgtgacttaag 255  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  45688382 atgcccctacgcatgttaacatgcgtagc-tgacttaag 45688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 9862967 - 9862914
Alignment:
Q  166 ttctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatg 219  Q
    |||||||| ||||||||||| || |||||||||||||| |||| ||| ||||||    
T  9862967 ttctgctctttacccaaatgatttcgctcattcccaaaataaatgtctaaaatg 9862914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 6702369 - 6702461
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||||| ||||    
T  6702369 tgaattctgctcattgcccaaatagtttcgctcattctcaaagtaaaagtcaaaaatgcccatacgcatgttaacttgcgtagcgtgagttaa 6702461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 256
Target Start/End: Original strand, 40008708 - 40008805
Alignment:
Q  159 ctatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||||||||||||||||| |||   |  ||||||||| ||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||    
T  40008708 ctatgaattctgctcattacctaaacattatcgctcattctcaaagtaaatgtctaaaatgcccctgcgcatgttaacatgcgtagcgtgacttaagt 40008805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 19402079 - 19401999
Alignment:
Q  161 atgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||| | |||||||||||||||||| | ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  19402079 atgaattattctcattacccaaatggtttcactcattctcaaagtaaaagtccaaaatgcccatacgcatgttaacatgcg 19401999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 30491869 - 30491782
Alignment:
Q  167 tctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||||||  | ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||| |||| ||||    
T  30491869 tctgctcattacccaaatgaattcgctcattcccaaagtaaaagtcgaaaatgtccctacgcatgttaacttgcgtagtgtgagttaa 30491782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 17644681 - 17644606
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaa 235  Q
    |||||||| ||||||||||| |||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  17644681 tatgaattgtgctcattaccgaaatggattcgctcattcccaaagtaaatgtccaaaatacccctacgcatgttaa 17644606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 34017698 - 34017600
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacg 260  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||| | || |||| |||||||||| || ||||||||   ||||||||||||||||    
T  34017698 tgaattctgctcattactcaaatggttccgctcattttcaaagtaaatgaccgaaatacccctacgcaagtaaacatgcgctacgtgacttaagtcacg 34017600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 191 - 256
Target Start/End: Complemental strand, 1975352 - 1975287
Alignment:
Q  191 gctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    ||||||| |||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  1975352 gctcatttccaaagtaaatgtccaaaatgcccatgcgcatgttaacatgcgtagcgtgacttaagt 1975287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 5504735 - 5504827
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||| |||||||||||||   |  |||||||||| |||||||||||| |||||||| |||||||||||||| |||||||||||| ||||    
T  5504735 tgaattctactcattacccaaacactatcgctcattcctaaagtaaaagtcgaaaatgcctctacgcatgttaacttgcgtagcgtgagttaa 5504827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 3458013 - 3458107
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||||||||||||||| |||  ||   ||||||| |||||||||| ||||||||| ||| | | |||||||||||||||||||||||||||||    
T  3458013 tgaattctgctcattaccgaaaccgtattgctcatttccaaagtaaatgtccaaaatacccatgcacatgttaacatgcgtagcgtgacttaagt 3458107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 4845302 - 4845392
Alignment:
Q  164 aattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    ||||||||||||||  ||||| ||  |||||||||| |||||||| ||| ||||||| ||| |||||||||||||| ||||||||||||||    
T  4845302 aattctgctcattattcaaatagtatcgctcattcctaaagtaaatgtctaaaatgctcctgcgcatgttaacatgtgtagcgtgacttaa 4845392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 19399501 - 19399583
Alignment:
Q  174 attacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagt 256  Q
    |||||| |||||||||| |||||||| ||||||||||| |||||||  | ||| |||||||||||| ||||||||||||||||    
T  19399501 attacctaaatggttccactcattcctaaagtaaaagttcaaaatgtacatacacatgttaacatgtgtagcgtgacttaagt 19399583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 34016002 - 34016079
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgc 240  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||| | |  |||||||||||| |||||||||||||    
T  34016002 gaattctgctcattacctaaatggattcgctcattcccaaagtaaatgactgaaatgcccctacacatgttaacatgc 34016079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 38739387 - 38739484
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaagtcacg 260  Q
    ||||| ||||| |||||||||| ||| ||||||||  ||||||||| |||  ||||||||||||||| |||| |||||||  ||||||||||||||||    
T  38739387 gaattatgctctttacccaaatcgtttcgctcattgtcaaagtaaatgtcacaaatgcccctacgcaagttagcatgcgttacgtgacttaagtcacg 38739484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 1974155 - 1974234
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    |||||| ||||||||||||| || ||  ||||||||||||||||||| ||||||||||| | | ||||||||||||||||    
T  1974155 tgaattatgctcattacccagatagtatcgctcattcccaaagtaaatgtccaaaatgctcttgcgcatgttaacatgcg 1974234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 30489753 - 30489800
Alignment:
Q  193 tcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgc 240  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  30489753 tcattcccaaagtaaaagtcgaaaatgcccctacgcatgttaacatgc 30489800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 1145141 - 1145214
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||| ||||||||| |||||  ||| ||||||||||||||||||| | |||||||||| ||||||||||||||    
T  1145141 gaattatgctcattatccaaacagtttcgctcattcccaaagtaaatgaccaaaatgcctctacgcatgttaac 1145214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 759160 - 759236
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatg 239  Q
    ||||||||||||||||| |||||| | || |||||||||||||||| | || |||||| | ||||||||||||||||    
T  759160 gaattctgctcattacctaaatggattcgatcattcccaaagtaaatgaccgaaatgctcatacgcatgttaacatg 759236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 6706107 - 6706035
Alignment:
Q  169 tgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||| |||||||| | |||||||| |||||||||| | |  |||||||||||||||||||||||||||    
T  6706107 tgctcattatccaaatggattcgctcatttccaaagtaaatgactgaaatgcccctacgcatgttaacatgcg 6706035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 33144262 - 33144171
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||| ||||||||||||   |  |||||||||| |||||||| | || |||||||||||||||||||||| ||||||| |||| ||||    
T  33144262 gaattctgttcattacccaaacaatatcgctcattcctaaagtaaatgaccgaaatgcccctacgcatgttaacttgcgtagggtgagttaa 33144171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 11135741 - 11135814
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||| ||||| ||||||||||| || |||||||| ||||| |||| | ||||||| |||||||||||||||||    
T  11135741 gaattatgctctttacccaaatgatttcgctcatttccaaaataaatgaccaaaatacccctacgcatgttaac 11135814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 36580219 - 36580296
Alignment:
Q  159 ctatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||||||||||||||||  ||||||||||||| ||| | ||| ||||||| ||||||  |||||| |||||||||    
T  36580219 ctatgaattctgctcattacttaaatggttccgcttatttctaaaataaaagttcaaaatatccctacacatgttaac 36580296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 6159021 - 6158948
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    |||||||||||||||||  |||||| | ||||||||||||||||||| ||| |||||  ||||||| ||||||||    
T  6159021 tgaattctgctcattacttaaatggattcgctcattcccaaagtaaatgtctaaaat-accctacgtatgttaac 6158948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 28677886 - 28677964
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcg 241  Q
    ||||||||||||||| ||||||||   |||||||||| |||||||| | || |||| |||||||| | |||||||||||    
T  28677886 gaattctgctcattatccaaatggaatcgctcattcctaaagtaaatgaccgaaatacccctacgtaagttaacatgcg 28677964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 763372 - 763327
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaa 208  Q
    ||||| |||||||||| |||||||||||||||||||||||| ||||    
T  763372 gaattatgctcattactcaaatggttccgctcattcccaaaataaa 763327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 33037430 - 33037386
Alignment:
Q  192 ctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||    
T  33037430 ctcattcccaaagtaaatgaccaaaatgcccctacacatgttaac 33037386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 17636343 - 17636389
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaa 208  Q
    |||||||||||||||||| |||||| | |||||||||||||| ||||    
T  17636343 tgaattctgctcattacctaaatggattcgctcattcccaaaataaa 17636389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 222
Target Start/End: Complemental strand, 40266669 - 40266607
Alignment:
Q  161 atgaattctgctcatt-acccaaatggttccgctcattcccaaagtaaaagtccaaaatgccc 222  Q
    ||||||||||||| || |||||||||| |  |||||||||||||||||| | |||||||||||    
T  40266669 atgaattctgctcttttacccaaatggatttgctcattcccaaagtaaatgaccaaaatgccc 40266607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 4847006 - 4846929
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcc-cctacgcatgttaacatg 239  Q
    ||||||| ||||||||||||| | |  |||||||| |||||||||| ||| ||||| || ||| ||||||||||||||    
T  4847006 gaattctactcattacccaaacgctatcgctcatttccaaagtaaatgtctaaaatacctcctgcgcatgttaacatg 4846929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 1145955 - 1145895
Alignment:
Q  162 tgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgccc 222  Q
    |||||||||| |||||||||||   || ||||||||||||||||||| |  ||||||||||    
T  1145955 tgaattctgcacattacccaaacaatttcgctcattcccaaagtaaatgatcaaaatgccc 1145895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 6269221 - 6269305
Alignment:
Q  148 catgtctttcactatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgt 232  Q
    ||||||||  ||| |||||||||||||||| |||||  ||  ||||||||  ||| ||||| |||||||||| |||| |||||||    
T  6269221 catgtcttgaactttgaattctgctcattatccaaacagtatcgctcattttcaatgtaaatgtccaaaatgtccctgcgcatgt 6269305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 24443 - 24352
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacatgcgtagcgtgacttaa 254  Q
    |||||||||||||||| ||||  ||  ||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||| ||||    
T  24443 gaattctgctcattactcaaacagtatcgctcattcccaaagtaaaagtttaaaatgcccctacgcatgttaacttgcgtagcgtgagttaa 24352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 23484 - 23534
Alignment:
Q  160 tatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    ||||||||||||||||||  |||||||||  |||||||| |||||||||||    
T  23484 tatgaattctgctcattattcaaatggttttgctcattctcaaagtaaaag 23534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1763 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 442 - 369
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||| ||||| |||||||||||||| |||||||||||||||||||| ||| |||||||| || ||||||||||    
T  442 gaattatgctctttacccaaatggtttcgctcattcccaaagtaaaaatcccaaatgcccttatgcatgttaac 369  T

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Target: scaffold1455 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 222
Target Start/End: Complemental strand, 451 - 392
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgccc 222  Q
    ||||||| ||| ||||||||||||    ||||||||||||||||||||||||||||||||    
T  451 gaattctactctttacccaaatggaaatgctcattcccaaagtaaaagtccaaaatgccc 392  T

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Target: scaffold0246 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 2931 - 2884
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaag 210  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  2931 gaattctgctcattacccaaatggtttcgctcattctcaaaataaaag 2884  T

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Target: scaffold0163 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 35771 - 35843
Alignment:
Q  158 actatgaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcat 230  Q
    |||| ||||||||||| ||| |||||   ||  |||||||| ||||||||| |||||||||||||||||||||    
T  35771 actaagaattctgctctttaaccaaacaattttgctcattctcaaagtaaatgtccaaaatgcccctacgcat 35843  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 69722 - 69797
Alignment:
Q  163 gaattctgctcattacccaaat-ggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaacat 238  Q
    ||||| ||||| |||| ||||| |||| |||||||| ||||||||||||||||||||| || ||| |||||||||||    
T  69722 gaattttgctctttactcaaattggtttcgctcattaccaaagtaaaagtccaaaatg-ccttacacatgttaacat 69797  T

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Target: scaffold0262 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 8384 - 8457
Alignment:
Q  163 gaattctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccctacgcatgttaac 236  Q
    ||||||||||| ||||||||| | ||| ||||||| | |||||||| ||  ||||| ||| |||||||||||||    
T  8384 gaattctgctctttacccaaacgtttctgctcatttctaaagtaaatgtgtaaaatacccttacgcatgttaac 8457  T

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Target: scaffold0037 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Complemental strand, 38373 - 38316
Alignment:
Q  166 ttctgctcattacccaaatggttccgctcattcccaaagtaaaagtccaaaatgcccc 223  Q
    |||||||| |||||||||  ||| ||||||||||||||||||  ||| ||||||||||    
T  38373 ttctgctctttacccaaactgtttcgctcattcccaaagtaattgtcgaaaatgcccc 38316  T

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