View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0070_low_6 (Length: 337)
Name: NF0070_low_6
Description: NF0070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0070_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 20171258 - 20170978
Alignment:
| Q |
46 |
gagaccaaaactttaactgcacacattgtttcttaaataatttcattcctacct-atatctctataaaattgcatcgatgtatagagcacatttttccca |
144 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20171258 |
gagaccaaaactttaactacacacattgtttcttaaataatttcattcctacctcatatctctataaaattgcatcgatgtatagagcacatttttccca |
20171159 |
T |
|
| Q |
145 |
gttcaagttaaacttccacttcaactttcatcaaactcgaggtgtaatggtttatataggctgagaactccttgttggagaagcaggacacgtgcaactc |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20171158 |
gttcaagttaaacttccacttcaactttcatcaaactcgaggtgtaatggtttatataggctgagaactccttgttggagaagcaggacacgtgcaactc |
20171059 |
T |
|
| Q |
245 |
tgttgtgtctagaatgcttatgccaccgaatcatttgcatgtgttctgtttctccaagatgggtttctctccttgtctctc |
325 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
20171058 |
tgttgtgtctagaatgcttatgccaccgaatcatttgcatgtgctctgtttctccaagatgggtttctctccttgtctctc |
20170978 |
T |
|
Back To:
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Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 46 - 325
Target Start/End: Complemental strand, 44392968 - 44392688
Alignment:
| Q |
46 |
gagaccaaaactttaactgcacacattgtttcttaaataatttcattcctacct-atatctctataaaattgcatcgatgtatagagcacatttttccca |
144 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44392968 |
gagaccaaaactttaactacacacattgtttcttaaataatttcattcctacctcatatctctataaaattgcatcgatgtatagagcacatttttccca |
44392869 |
T |
|
| Q |
145 |
gttcaagttaaacttccacttcaactttcatcaaactcgaggtgtaatggtttatataggctgagaactccttgttggagaagcaggacacgtgcaactc |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44392868 |
gttcaagttaaacttccacttcaactttcatcaaactcgaggtgtaatggtttatataggctgagaactccttgttggagaagcaggacacgtgcaactc |
44392769 |
T |
|
| Q |
245 |
tgttgtgtctagaatgcttatgccaccgaatcatttgcatgtgttctgtttctccaagatgggtttctctccttgtctctc |
325 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
44392768 |
tgttgtgtctagaatgcttatgccaccgaatcatttgcatgtgctctgtttctccaagatgggtttctctccttgtctctc |
44392688 |
T |
|
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