View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0074_low_3 (Length: 330)
Name: NF0074_low_3
Description: NF0074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0074_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 3 - 286
Target Start/End: Original strand, 1721085 - 1721367
Alignment:
| Q |
3 |
atcactcattatttgatcaggccaagtatatatgcatctaacaagaagaatgtttaaatagagaagttttcaactcaagtgtaccattggatttgagctg |
102 |
Q |
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| T |
1721085 |
atcactcattatttgatcagggcaagtatatatgcatctaacaagaagaatgtttaaatagagaagttttcaactcaagtgtaccattggatttgagctg |
1721184 |
T |
|
| Q |
103 |
tcttcagctcaaatatgaaaacaaacattatttttggattgacaactttcacctttgtcgatgcattttctttcagaaaattgtgaaccgttacataaac |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
1721185 |
tcttcagctcaaatatgaaaacaaacattatttttggattgacaactttcacctttgttaatgcattttctttcagaaaattgtgaaccgttacataaac |
1721284 |
T |
|
| Q |
203 |
aaagctacatattttttgtattaataaaaaagatgtgaaatgtggaatccaatccctcaaattggaggatgcatattggttacc |
286 |
Q |
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|||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1721285 |
aaagttacatattttttgtattaat-aaaaagatgtgaaatgtggaatccaatccctcaaattggaggatgcatattggttacc |
1721367 |
T |
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