View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0075-INSERTION-34 (Length: 769)
Name: NF0075-INSERTION-34
Description: NF0075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0075-INSERTION-34 |
 | |
|
| [»] scaffold0182 (1 HSPs) |
| | |
|
| [»] scaffold0430 (1 HSPs) |
| | |
|
| [»] scaffold0115 (1 HSPs) |
| | |
|
| [»] scaffold0004 (1 HSPs) |
| | |
|
| [»] scaffold0501 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 474; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 8 - 733
Target Start/End: Complemental strand, 21750519 - 21749755
Alignment:
| Q |
8 |
gggatgagatttaatttctcatctctgttgaatacgagtatgtaagaagtaaatatatggaagtagaaaatgaagatgggaaaggcaaaatccatcccca |
107 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |
|
|
| T |
21750519 |
gggatgagattcaatttctcatctctgttgggtacgagtaggtaacaattaaatatatggaagtagaaaatggagatggggaagacaaaatccatcccca |
21750420 |
T |
|
| Q |
108 |
ccccactccg-----ttgtcatgcctacgtattacttaaaaacccattcgacccaataaactaaaactttgacctacaaaattacaactcctcttattgt |
202 |
Q |
| |
|
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21750419 |
ccccaccccaccccattgccatgcctacgtattacttaaaaacccattcgacccaataaactaaaactttgacctacaaaattacaactcctcttattgt |
21750320 |
T |
|
| Q |
203 |
att-----tgtcgacaaaacaaataaccacacttgtatctcgaaa---------------------gctctaggacttaaataccaaaaggcagagaaga |
276 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
21750319 |
attgtatgtgtcaacaaaacaaataaccacacttgtatctcgaaattaagcatgagtacaccgaatgctctaggacttaaataccaaaaggcagagaaga |
21750220 |
T |
|
| Q |
277 |
acaataattacaaaagttacaaaaaactatacatattatgcagaaaaataagcttgtaaagaatggtaagaagcatacgacttcttcccagccttatcac |
376 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21750219 |
acaataattacaa--gttacaaaaaactatacatattatgcagaaaaataaacttgtaaagaatggtaagaagcatacgacttcttcccagccttatcac |
21750122 |
T |
|
| Q |
377 |
aaaaaaggaaaatgacttcgcaacactaatgtggcaaaaagaaaagcaacgacatcagaccccaaatctcactactacaaaataatccctttaatagcgc |
476 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21750121 |
aaaaaagaaaaatgacttcgcaacactaatgtggcaaaaagaaaagcaacaacatcaaaccccaaatctcactactacaaaataatccctttaatagcgc |
21750022 |
T |
|
| Q |
477 |
catttgagcattttaataatgtttgtgaagtgctaggaaaccccctgctattaaaagtcaaaatgctataatagcgttttctaag----------tagca |
566 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21750021 |
catttgagcattttaataatgtttgtgaagtgctaggaaaccccctacaattaaaggtcaaaatgctataatagcgttttctaagtgctattaaatagca |
21749922 |
T |
|
| Q |
567 |
acatttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgctaataaaa |
666 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21749921 |
acatttcaatagagctttcagaaaagcgctaatacagccttacttttgggctatttttaaactggtgtttcttagcgttttacggaaagcgctaataaaa |
21749822 |
T |
|
| Q |
667 |
gtccctannnnnnnnnnnnnaattaaatctacaaccaaaaacattataataaaatgctgatgagaca |
733 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
21749821 |
gtccctatttttatttttttaattaaatctacaaccaaaagcattataataaaatgctaatgagaca |
21749755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 569 - 673
Target Start/End: Original strand, 23921964 - 23922068
Alignment:
| Q |
569 |
atttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgctaataaaagt |
668 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||| |||||||| || |||||| | ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
23921964 |
atttcaatagcactttcagaaaagcgctaagaaagccttatttttgtgcatttattaaacagatgtttcttagcgttttcaaaaaagcgctaataaaagt |
23922063 |
T |
|
| Q |
669 |
cccta |
673 |
Q |
| |
|
||||| |
|
|
| T |
23922064 |
cccta |
23922068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 386; Significance: 0; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 8 - 733
Target Start/End: Complemental strand, 16697 - 15935
Alignment:
| Q |
8 |
gggatgagatttaatttctcatctctgttgaatacgagtatgtaagaagtaaatatatggaagtagaaaatgaagatgggaaaggcaaaatccatcccca |
107 |
Q |
| |
|
||||||| ||| ||||||||||| ||||| ||||||||| |||| | ||||||||||| |||| ||||||| |||| | ||||||||| | |||||| |
|
|
| T |
16697 |
gggatgaaattcaatttctcatccatgttggatacgagtaggtaacatgtaaatatatgagagta-aaaatgaggatgaggaaggcaaaacctgtcccca |
16599 |
T |
|
| Q |
108 |
ccccactccgttgtcatgcctacgtattacttaaaaacccattcgacccaataaactaaaactttgacctacaaaattacaactcctcttattgtatt-- |
205 |
Q |
| |
|
|||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| |
|
|
| T |
16598 |
tcccatcccgttgccatgcctacgtattacttaagaacccattcgacccaataaactaaaactttggcctacaaaattacaactcctcctgttgtattgt |
16499 |
T |
|
| Q |
206 |
---tgtcgacaaaacaaataaccacacttgtatctcgaaa---------------------gctctaggacttaaataccaaaaggcagagaagaacaat |
281 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16498 |
atgtgtcaacaaaacaaataaccacacttgtatctcgaaattaagcatgagtacaccgaatgctttaggacttaaataccaaaaggcagagaagaacaat |
16399 |
T |
|
| Q |
282 |
aattacaaaagttacaaaaaactatacatattatgcagaaaaataagcttgtaaagaatggtaagaagcatacgacttcttcccagccttatcacaaaaa |
381 |
Q |
| |
|
||||| |||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16398 |
aattagaaaagtaacaaaaaagcatacatattatgcagaaaaataaacttgtaaagaatggtaagaagcatacgacttcttcccagccttatcacaaaaa |
16299 |
T |
|
| Q |
382 |
aggaaaatgacttcgcaacactaatgtggcaaaaagaaaagcaacgacatcagaccccaaatctcactactacaaaataatccctttaatagcgc-catt |
480 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
16298 |
agaaaaatgacttcgcaacactaatatggcaaaaagaaaagcaacaacatcagacctcaaatctcactactacaaaataatctctttaatagcgctcatt |
16199 |
T |
|
| Q |
481 |
tgagcattttaataatgtttgtgaagtgctaggaaaccccctgctattaaaagtcaaaatgctataatagcgttttctaag----------tagcaacat |
570 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||| |
|
|
| T |
16198 |
tgagcattttaataatatttgtgaagcgctaggaaagcccctgctattaaaagtcaaaacgctataatatcgttttctaagtgctattaaatagcaacat |
16099 |
T |
|
| Q |
571 |
ttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgctaataaaagtcc |
670 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
16098 |
ttcaatagagctttcagaaaagcgttaatacaaccttaattttgtgctatttttaaactggtgtttctcagcattttacggaaagcgctaacaaaagtcc |
15999 |
T |
|
| Q |
671 |
cta-nnnnnnnnnnnnnaattaaatctacaaccaaaaacattataataaaatgctgatgagaca |
733 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
15998 |
ctatttttattttttttaattaaatctacaaccaaaagcattataataaaatgctgatgagaca |
15935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 444 - 673
Target Start/End: Complemental strand, 3316239 - 3316001
Alignment:
| Q |
444 |
ctcactactacaaaataatccctttaatagcgc-catttgagcattttaataatgtttgtgaagtgctaggaaaccccctgctattaaaagtcaaaatgc |
542 |
Q |
| |
|
||||||||||||||||| |||||||||||| | ||||| ||| ||| |||| | || ||||| |||| |||| |||| ||||||||| || | ||||| |
|
|
| T |
3316239 |
ctcactactacaaaataccccctttaatagcactcattttagcgttt-aatagcgcttatgaagcgctaagaaagcccccgctattaaaggtaagaatgc |
3316141 |
T |
|
| Q |
543 |
tataatagcgttttctaag----------tagcaacatttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggt |
632 |
Q |
| |
|
|||||||||| |||||||| |||||| ||||||||| ||||||| ||||||||||| | ||||| ||||||||||||||||| ||| | |
|
|
| T |
3316140 |
tataatagcgctttctaagcgctattaaatagcaatgtttcaatagcgctttcaaaaaagcgctaacaaagcctcatttttgtgctatttttaa-ctgat |
3316042 |
T |
|
| Q |
633 |
gtttcttagcattttacggaaagcgctaataaaagtcccta |
673 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||| ||||||| |
|
|
| T |
3316041 |
gtttcttagcgttttacggaaagcgctgataaatgtcccta |
3316001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 580 - 673
Target Start/End: Complemental strand, 2532466 - 2532373
Alignment:
| Q |
580 |
gctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgctaataaaagtcccta |
673 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| ||||||||||| || ||||||||||||| ||| | ||||||||||||||||||||| |
|
|
| T |
2532466 |
gctttcagaaaagcgctaataaagccttatttttatgctatttttagacaggtgtttcttagcgctttcagacaagcgctaataaaagtcccta |
2532373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 569 - 647
Target Start/End: Complemental strand, 31471693 - 31471615
Alignment:
| Q |
569 |
atttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtgtttcttagcatttt |
647 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||| |||||| ||||| |||||||||||||| | | ||||||||| |||| |
|
|
| T |
31471693 |
atttcaatagcgctttcaaaaaagcgctaataaagccttacttttatgctatttttaaacagatatttcttagcgtttt |
31471615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 691 - 733
Target Start/End: Complemental strand, 45838152 - 45838110
Alignment:
| Q |
691 |
aaatctacaaccaaaaacattataataaaatgctgatgagaca |
733 |
Q |
| |
|
||||||||| |||||| || ||||||||||||||||||||||| |
|
|
| T |
45838152 |
aaatctacagccaaaagcaatataataaaatgctgatgagaca |
45838110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0430 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0430
Description:
Target: scaffold0430; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 580 - 673
Target Start/End: Original strand, 10473 - 10565
Alignment:
| Q |
580 |
gctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgctaataaaagtcccta |
673 |
Q |
| |
|
||||||||||||||||||||| |||||| |||| |||||| ||||| ||| ||||||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
10473 |
gctttcagaaaagcgctaatatagccttatttttttgctatatttaa-ctgatgtttcttagcgttttacagaaagcgctaataaaagtcccta |
10565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 570 - 660
Target Start/End: Original strand, 27004886 - 27004976
Alignment:
| Q |
570 |
tttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgcta |
660 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||| ||| |||||| ||||| |
|
|
| T |
27004886 |
tttcaatagtgctttcagaaaagcgctaatatagccttatttttgttctatttttaaacatatgtttcttagcgcttttcggaaatcgcta |
27004976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0115 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0115
Description:
Target: scaffold0115; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 584 - 673
Target Start/End: Original strand, 37187 - 37276
Alignment:
| Q |
584 |
tcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgctaataaaagtcccta |
673 |
Q |
| |
|
||||||||||||||||| |||||| |||| ||||||||||| || ||||||||||||| ||| | ||||||||||||||||||||| |
|
|
| T |
37187 |
tcagaaaagcgctaataaagccttatttttatgctatttttagacaggtgtttcttagcgctttcagagaagcgctaataaaagtcccta |
37276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 604 - 673
Target Start/End: Original strand, 25103457 - 25103525
Alignment:
| Q |
604 |
ccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgctaataaaagtcccta |
673 |
Q |
| |
|
||||| ||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
25103457 |
ccttgtttttgtgctatttttaa-ctgatgtttcttagcgttttacataaagcgctaataaaagtcccta |
25103525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 604 - 673
Target Start/End: Original strand, 25162550 - 25162618
Alignment:
| Q |
604 |
ccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgctaataaaagtcccta |
673 |
Q |
| |
|
||||| ||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
25162550 |
ccttgtttttgtgctatttttaa-ctgatgtttcttagcgttttacataaagcgctaataaaagtcccta |
25162618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 445 - 660
Target Start/End: Original strand, 25103224 - 25103448
Alignment:
| Q |
445 |
tcactactacaaaataatccctttaatagcgc-catttgagcattttaataatgtttgtgaagtgctaggaaaccccctgctattaaaagtcaaaatgct |
543 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||| ||| ||| |||| | |||||||| |||| |||| ||| ||||||||| |||| ||| || |
|
|
| T |
25103224 |
tcactactacaaaataccccctttaatagcattcattttagcgttt-aatagcgcttgtgaagagctaagaaagccctggctattaaaggtcagaatcct |
25103322 |
T |
|
| Q |
544 |
ataatagcgttttctaag----------tagcaacatttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtg |
633 |
Q |
| |
|
||||||| | |||||||| ||||||| ||||||||| |||||| ||||||||||||| ||| | ||||||| ||||||| | ||| || |
|
|
| T |
25103323 |
ataatagtgctttctaagcgctattaaatagcaacgtttcaatagcactttcataaaagcgctaataaagcttcatttttgtgttattttt-atctgatg |
25103421 |
T |
|
| Q |
634 |
tttcttagcattttacggaaagcgcta |
660 |
Q |
| |
|
||||||||||| ||||| ||||||||| |
|
|
| T |
25103422 |
tttcttagcatcttacgaaaagcgcta |
25103448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 445 - 660
Target Start/End: Original strand, 25162317 - 25162541
Alignment:
| Q |
445 |
tcactactacaaaataatccctttaatagcgc-catttgagcattttaataatgtttgtgaagtgctaggaaaccccctgctattaaaagtcaaaatgct |
543 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||| ||| ||| |||| | |||||||| |||| |||| ||| ||||||||| |||| ||| || |
|
|
| T |
25162317 |
tcactactacaaaataccccctttaatagcattcattttagcgttt-aatagcgcttgtgaagagctaagaaagccctggctattaaaggtcagaatcct |
25162415 |
T |
|
| Q |
544 |
ataatagcgttttctaag----------tagcaacatttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtg |
633 |
Q |
| |
|
||||||| | |||||||| ||||||| ||||||||| |||||| ||||||||||||| ||| | ||||||| ||||||| | ||| || |
|
|
| T |
25162416 |
ataatagtgctttctaagcgctattaaatagcaacgtttcaatagcactttcataaaagcgctaataaagcttcatttttgtgttattttt-atctgatg |
25162514 |
T |
|
| Q |
634 |
tttcttagcattttacggaaagcgcta |
660 |
Q |
| |
|
||||||||||| ||||| ||||||||| |
|
|
| T |
25162515 |
tttcttagcatcttacgaaaagcgcta |
25162541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 607
Target Start/End: Original strand, 17005509 - 17005554
Alignment:
| Q |
562 |
tagcaacatttcaatagagctttcagaaaagcgctaatacagcctt |
607 |
Q |
| |
|
|||||| || ||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
17005509 |
tagcaatatgtcaatagcgctttcagaaaagcgctaatatagcctt |
17005554 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 570 - 660
Target Start/End: Original strand, 333499 - 333588
Alignment:
| Q |
570 |
tttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgcta |
660 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| | | |||||||| | ||| |||||||||||| |
|
|
| T |
333499 |
tttcaatagcactttcagaaaagcgctaatatagccttatctttgtgctatttttaaacagatatttcttag-agttttcggaaagcgcta |
333588 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 570 - 628
Target Start/End: Original strand, 34711897 - 34711955
Alignment:
| Q |
570 |
tttcaatagagctttcagaaaagcgctaatacagccttgcttttgtgctatttttaaac |
628 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||| |||||| |||||||||||| |
|
|
| T |
34711897 |
tttcaatagtgctttcagaaaagcgctaatatagccttatttttgttctatttttaaac |
34711955 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 670
Target Start/End: Complemental strand, 1579162 - 1579102
Alignment:
| Q |
610 |
ttttgtgctatttttaaactggtgtttcttagcattttacggaaagcgctaataaaagtcc |
670 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
1579162 |
ttttttgctatttttaaacaaatgtttcttagcgtttttcggaaagcgctaataaaagtcc |
1579102 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0501 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0501
Description:
Target: scaffold0501; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 632 - 670
Target Start/End: Original strand, 10548 - 10586
Alignment:
| Q |
632 |
tgtttcttagcattttacggaaagcgctaataaaagtcc |
670 |
Q |
| |
|
||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
10548 |
tgtttcttagcgtttttcggaaagcgctaataaaagtcc |
10586 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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