View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0075-INSERTION-8 (Length: 265)

Name: NF0075-INSERTION-8
Description: NF0075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0075-INSERTION-8
NF0075-INSERTION-8
[»] chr2 (1 HSPs)
chr2 (8-265)||(8795820-8796076)


Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 8 - 265
Target Start/End: Original strand, 8795820 - 8796076
Alignment:
Q  8 ccgaagtcctccaaatatttggattcattacaaagtagattctttaataatgttaatatattaagaacactacaaaagccagtgaaatctgagagtttct 107  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8795820 ccgaagtcctccaatt-tttggattcattacaaagtagattctttaataatgttaatatattaagaacactacaaaagccagtgaaatctgagagtttct 8795918  T
Q  108 gtgacctcatcaaaagggaaattttaagaaaaagctatatgtgtgatgatgcaagtcttatagttcccataaaaacaatactatcaagcacacacaaaag 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8795919 gtgacctcatcaaaagggaaattttaagaaaaagctatatgtgtgatgatgcaagtcttatagttcccataaaaacaatactatcaagcacacacacaag 8796018  T
Q  208 aaaagacgaatttaacaagatacctatatagttaagttccttcaatgcaccaacacca 265  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8796019 aaaagacgaatttaacaagatacctatatagttaagttccttcaatgcaccaacacca 8796076  T

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