View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0075_low_17 (Length: 266)
Name: NF0075_low_17
Description: NF0075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0075_low_17 |
 | |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 35327573 - 35327345
Alignment:
| Q |
1 |
cctccaggttcaccagctctgcttcttcacaccattttctatattcattcattcattcattttgtttccgatcgatcatcaatcctattttcgtaattgc |
100 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
35327573 |
cctccaggttcaccagctctgcttcttcacaccattttctatattcattcatt--------ttgtttccgatcgatcatcaatcctattttcgtaattgc |
35327482 |
T |
|
| Q |
101 |
agaattttccttgtcaagaagttgaaagacataacaaacccgaggttgaactcaagtaagcattttctcacttacaccgattaacatcattatagttaca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
35327481 |
agaattttccttgtcaagaagttgaaagacataacaaacccgaggttgaactcaagtaagcattttctcacttacaccgattaacatcattatagttaca |
35327382 |
T |
|
| Q |
201 |
tcgatcagtgcttatgctatgtttaagattttcacct |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
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|
| T |
35327381 |
tcgatcagtgcttatgctatgtttaagattttcacct |
35327345 |
T |
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