View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0076-INSERTION-5 (Length: 295)
Name: NF0076-INSERTION-5
Description: NF0076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0076-INSERTION-5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 33887208 - 33887502
Alignment:
| Q |
1 |
atcagtcagcttggaaatccatgcataatgtgatatgtgggggagcaaaattcatggatagttacttgaaaattttgacaaaaaatggagttagagtaaa |
100 |
Q |
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| T |
33887208 |
atcaatcagcttggaaatccatgcataatgtgatatgtgggggagcaaaattcatggatagttacttgaaaattttgacaaaaaatggagttagaataaa |
33887307 |
T |
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| Q |
101 |
tgttatacaaggtgatagagatcaagttgtcccaaaggagtgtaccactaagttcaagttaaaggctccatatgctgaaattaacataattccaaatgca |
200 |
Q |
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| T |
33887308 |
tgttatacaaggtgatggagatcaagttgtcccaaaggagtgtatcactaagttcaagttaaaggctccatatgctgaaattaacataattccaaatgca |
33887407 |
T |
|
| Q |
201 |
gatcacagcactgtgctattgggcagagagaagcaatttgcacaaagtctggagcatacatgggcatcttgctaagttccattgattaaatatga |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33887408 |
gatcacagcactgtgctattgggcagagagaagcaatttgcacaaagtctggagcatacatgggcatcttgctaagttccattgattaaatatga |
33887502 |
T |
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