View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0079_high_1 (Length: 244)

Name: NF0079_high_1
Description: NF0079
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0079_high_1
NF0079_high_1
[»] chr3 (39 HSPs)
chr3 (15-237)||(1598359-1598581)
chr3 (15-244)||(15941776-15942006)
chr3 (15-244)||(3833678-3833908)
chr3 (15-244)||(38814388-38814618)
chr3 (36-244)||(17241998-17242206)
chr3 (17-105)||(4589207-4589294)
chr3 (17-105)||(19775353-19775440)
chr3 (15-102)||(8489487-8489573)
chr3 (15-102)||(15464869-15464955)
chr3 (15-107)||(16696789-16696880)
chr3 (15-102)||(5223068-5223154)
chr3 (15-132)||(16798039-16798156)
chr3 (36-102)||(11854442-11854507)
chr3 (36-148)||(15850052-15850164)
chr3 (15-102)||(12339470-12339556)
chr3 (15-132)||(16808866-16808983)
chr3 (17-102)||(16750605-16750689)
chr3 (36-132)||(31097539-31097637)
chr3 (36-80)||(11300802-11300846)
chr3 (148-244)||(16865005-16865101)
chr3 (36-83)||(2897858-2897905)
chr3 (36-83)||(14668584-14668631)
chr3 (36-83)||(19725953-19726000)
chr3 (36-102)||(4107414-4107479)
chr3 (36-102)||(4111266-4111331)
chr3 (15-148)||(15482666-15482802)
chr3 (36-102)||(15964996-15965061)
chr3 (36-102)||(15968920-15968985)
chr3 (36-102)||(15972844-15972909)
chr3 (36-102)||(19775792-19775857)
chr3 (36-79)||(3403003-3403046)
chr3 (36-79)||(12172823-12172866)
chr3 (36-83)||(14665428-14665475)
chr3 (36-83)||(15617401-15617448)
chr3 (36-79)||(18383962-18384005)
chr3 (36-83)||(20461535-20461582)
chr3 (36-83)||(30065973-30066020)
chr3 (36-78)||(11862820-11862862)
chr3 (36-102)||(37439653-37439718)
[»] chr8 (22 HSPs)
chr8 (15-242)||(17828457-17828684)
chr8 (15-244)||(15538452-15538682)
chr8 (15-190)||(24445433-24445608)
chr8 (15-244)||(15531893-15532122)
chr8 (15-244)||(23846887-23847117)
chr8 (36-237)||(16231354-16231556)
chr8 (15-244)||(30308626-30308855)
chr8 (15-107)||(17055390-17055481)
chr8 (15-107)||(32605214-32605305)
chr8 (15-107)||(32598682-32598773)
chr8 (15-102)||(21387077-21387163)
chr8 (36-244)||(23834197-23834407)
chr8 (15-102)||(21383657-21383743)
chr8 (36-223)||(22044909-22045097)
chr8 (15-102)||(14398124-14398210)
chr8 (187-244)||(24434109-24434166)
chr8 (36-102)||(18862662-18862727)
chr8 (36-102)||(21410974-21411039)
chr8 (36-102)||(21805466-21805531)
chr8 (36-102)||(21828031-21828096)
chr8 (36-79)||(30643338-30643381)
chr8 (172-244)||(18619640-18619712)
[»] chr4 (32 HSPs)
chr4 (15-244)||(45938152-45938381)
chr4 (15-244)||(19757473-19757703)
chr4 (15-244)||(19782103-19782333)
chr4 (15-244)||(16243272-16243502)
chr4 (15-244)||(26243537-26243767)
chr4 (15-244)||(23139275-23139504)
chr4 (15-242)||(2014782-2015010)
chr4 (15-244)||(9530438-9530667)
chr4 (36-244)||(18222250-18222459)
chr4 (15-244)||(18236895-18237126)
chr4 (36-244)||(17152359-17152567)
chr4 (15-140)||(42997426-42997552)
chr4 (15-107)||(28569455-28569546)
chr4 (15-107)||(14708645-14708736)
chr4 (15-244)||(3412802-3413030)
chr4 (36-244)||(18228725-18228934)
chr4 (36-120)||(1951758-1951842)
chr4 (17-105)||(15224800-15224887)
chr4 (15-102)||(43256428-43256514)
chr4 (15-107)||(18602742-18602833)
chr4 (36-102)||(10712877-10712942)
chr4 (36-102)||(10926647-10926712)
chr4 (36-89)||(14954196-14954249)
chr4 (36-148)||(17810296-17810411)
chr4 (15-120)||(22634418-22634525)
chr4 (36-89)||(25689894-25689947)
chr4 (36-83)||(9556554-9556601)
chr4 (36-79)||(16488124-16488167)
chr4 (15-102)||(18609319-18609405)
chr4 (36-83)||(20157502-20157549)
chr4 (36-83)||(36133997-36134044)
chr4 (36-72)||(13813072-13813108)
[»] scaffold0070 (1 HSPs)
scaffold0070 (15-244)||(9907-10137)
[»] chr7 (32 HSPs)
chr7 (15-244)||(13149158-13149388)
chr7 (36-238)||(6801237-6801440)
chr7 (36-244)||(18930-19139)
chr7 (15-132)||(18556976-18557093)
chr7 (15-244)||(16724503-16724732)
chr7 (15-244)||(17701517-17701746)
chr7 (15-244)||(8917430-8917660)
chr7 (36-244)||(11987236-11987446)
chr7 (15-107)||(16275495-16275586)
chr7 (15-132)||(14216918-14217035)
chr7 (15-132)||(15728328-15728445)
chr7 (36-120)||(9593370-9593454)
chr7 (15-244)||(13461764-13461995)
chr7 (15-107)||(35151609-35151700)
chr7 (15-102)||(13918795-13918881)
chr7 (36-120)||(16457354-16457438)
chr7 (15-89)||(1859113-1859187)
chr7 (15-89)||(25927530-25927604)
chr7 (40-102)||(7519373-7519434)
chr7 (17-120)||(2530387-2530491)
chr7 (17-102)||(18425443-18425527)
chr7 (15-148)||(13635436-13635572)
chr7 (15-148)||(12318130-12318266)
chr7 (15-148)||(16583259-16583395)
chr7 (36-102)||(45170023-45170088)
chr7 (36-148)||(11312672-11312787)
chr7 (15-83)||(15580694-15580762)
chr7 (36-83)||(2832484-2832531)
chr7 (36-83)||(9751797-9751844)
chr7 (36-83)||(39722290-39722337)
chr7 (36-72)||(26292419-26292455)
chr7 (36-72)||(39267953-39267989)
[»] chr5 (25 HSPs)
chr5 (15-244)||(33409232-33409462)
chr5 (36-244)||(21340639-21340847)
chr5 (15-242)||(16674156-16674384)
chr5 (17-244)||(17718311-17718538)
chr5 (36-236)||(26666011-26666211)
chr5 (36-236)||(26937608-26937808)
chr5 (37-237)||(20232577-20232777)
chr5 (36-223)||(24532941-24533128)
chr5 (36-244)||(18784071-18784281)
chr5 (36-244)||(18774228-18774438)
chr5 (15-107)||(21885200-21885291)
chr5 (36-244)||(42805445-42805654)
chr5 (36-113)||(26742751-26742827)
chr5 (15-107)||(4036223-4036314)
chr5 (15-107)||(25229417-25229508)
chr5 (15-107)||(25293573-25293664)
chr5 (15-102)||(20911186-20911272)
chr5 (17-105)||(10752949-10753036)
chr5 (15-107)||(26172468-26172559)
chr5 (15-102)||(18355961-18356047)
chr5 (36-102)||(10753388-10753453)
chr5 (37-83)||(24767588-24767634)
chr5 (15-83)||(23535622-23535690)
chr5 (36-83)||(17410464-17410511)
chr5 (36-79)||(21366711-21366754)
[»] chr2 (18 HSPs)
chr2 (15-244)||(18855333-18855561)
chr2 (15-244)||(19928374-19928604)
chr2 (36-238)||(22461067-22461269)
chr2 (15-107)||(41666953-41667044)
chr2 (15-131)||(27263276-27263392)
chr2 (15-244)||(23187079-23187309)
chr2 (15-244)||(23598342-23598572)
chr2 (15-102)||(31344881-31344967)
chr2 (15-132)||(60820-60936)
chr2 (15-107)||(26125212-26125298)
chr2 (36-148)||(41530977-41531086)
chr2 (36-79)||(22811958-22812001)
chr2 (36-102)||(30345008-30345073)
chr2 (36-148)||(10101612-10101727)
chr2 (36-83)||(24735427-24735474)
chr2 (36-102)||(1283413-1283478)
chr2 (36-72)||(27379479-27379515)
chr2 (36-72)||(27383525-27383561)
[»] scaffold0003 (2 HSPs)
scaffold0003 (15-244)||(139715-139944)
scaffold0003 (15-73)||(71072-71130)
[»] chr6 (30 HSPs)
chr6 (15-237)||(22592683-22592905)
chr6 (15-244)||(9482165-9482395)
chr6 (15-223)||(12496312-12496521)
chr6 (36-238)||(19662795-19662997)
chr6 (36-236)||(2685199-2685399)
chr6 (15-244)||(5616686-5616917)
chr6 (36-237)||(12706714-12706916)
chr6 (15-132)||(1587716-1587833)
chr6 (17-105)||(1644293-1644380)
chr6 (17-105)||(31478244-31478331)
chr6 (35-223)||(16741230-16741419)
chr6 (15-102)||(23414649-23414735)
chr6 (15-102)||(27556407-27556493)
chr6 (15-132)||(20803539-20803656)
chr6 (15-107)||(21702291-21702382)
chr6 (15-140)||(25135648-25135774)
chr6 (17-102)||(16624137-16624221)
chr6 (36-148)||(22429997-22430112)
chr6 (15-73)||(27416231-27416289)
chr6 (36-102)||(31477827-31477892)
chr6 (36-148)||(17804221-17804336)
chr6 (36-89)||(22949132-22949185)
chr6 (36-89)||(22953088-22953141)
chr6 (36-89)||(23871576-23871629)
chr6 (36-89)||(23875532-23875585)
chr6 (38-102)||(16760321-16760384)
chr6 (36-79)||(16523430-16523473)
chr6 (36-83)||(27325653-27325700)
chr6 (36-148)||(1644729-1644844)
chr6 (36-148)||(25767135-25767250)
[»] scaffold0042 (2 HSPs)
scaffold0042 (15-244)||(63858-64087)
scaffold0042 (15-230)||(75742-75957)
[»] chr1 (20 HSPs)
chr1 (15-242)||(46975471-46975699)
chr1 (15-244)||(18882371-18882601)
chr1 (36-244)||(20138108-20138317)
chr1 (36-238)||(12646896-12647098)
chr1 (36-244)||(19211892-19212101)
chr1 (15-102)||(33797286-33797372)
chr1 (36-244)||(23819171-23819380)
chr1 (17-107)||(20229241-20229330)
chr1 (17-89)||(39244170-39244242)
chr1 (17-89)||(39247725-39247797)
chr1 (17-89)||(41388270-41388342)
chr1 (36-102)||(1925146-1925211)
chr1 (36-102)||(20924160-20924225)
chr1 (36-145)||(24783070-24783182)
chr1 (36-83)||(1010747-1010794)
chr1 (36-79)||(3472969-3473012)
chr1 (36-79)||(18182167-18182210)
chr1 (15-82)||(36819345-36819412)
chr1 (36-148)||(20228776-20228891)
chr1 (36-84)||(22449307-22449355)
[»] scaffold0132 (1 HSPs)
scaffold0132 (15-244)||(36310-36539)
[»] scaffold0284 (1 HSPs)
scaffold0284 (15-244)||(18358-18588)
[»] scaffold0193 (1 HSPs)
scaffold0193 (15-244)||(9424-9654)
[»] scaffold0334 (1 HSPs)
scaffold0334 (36-244)||(18232-18441)
[»] scaffold0585 (1 HSPs)
scaffold0585 (15-140)||(9338-9464)
[»] scaffold0546 (2 HSPs)
scaffold0546 (15-242)||(6131-6359)
scaffold0546 (15-140)||(1903-2029)
[»] scaffold0109 (3 HSPs)
scaffold0109 (15-242)||(6948-7176)
scaffold0109 (15-140)||(11278-11404)
scaffold0109 (15-140)||(38795-38921)
[»] scaffold0043 (1 HSPs)
scaffold0043 (15-107)||(77182-77273)
[»] scaffold0111 (2 HSPs)
scaffold0111 (15-107)||(8503-8594)
scaffold0111 (15-107)||(15647-15738)
[»] scaffold0008 (1 HSPs)
scaffold0008 (15-107)||(1880-1971)
[»] scaffold0371 (1 HSPs)
scaffold0371 (15-106)||(15341-15431)
[»] scaffold0130 (1 HSPs)
scaffold0130 (15-140)||(5976-6102)
[»] scaffold0001 (1 HSPs)
scaffold0001 (15-148)||(173295-173429)
[»] scaffold0044 (3 HSPs)
scaffold0044 (15-132)||(62264-62381)
scaffold0044 (15-148)||(12907-13043)
scaffold0044 (15-83)||(19191-19259)
[»] scaffold0029 (4 HSPs)
scaffold0029 (17-105)||(80300-80387)
scaffold0029 (36-102)||(80739-80804)
scaffold0029 (36-148)||(65495-65610)
scaffold0029 (36-148)||(61579-61694)
[»] scaffold0293 (1 HSPs)
scaffold0293 (15-102)||(20480-20566)
[»] scaffold0168 (1 HSPs)
scaffold0168 (36-244)||(3402-3611)
[»] scaffold0010 (1 HSPs)
scaffold0010 (36-244)||(23241-23450)
[»] scaffold1552 (1 HSPs)
scaffold1552 (15-132)||(372-489)
[»] scaffold0034 (1 HSPs)
scaffold0034 (18-107)||(16674-16762)
[»] scaffold0012 (2 HSPs)
scaffold0012 (36-244)||(24840-25050)
scaffold0012 (36-102)||(189394-189459)
[»] scaffold0037 (1 HSPs)
scaffold0037 (17-105)||(80789-80876)
[»] scaffold0009 (1 HSPs)
scaffold0009 (15-120)||(228370-228475)
[»] scaffold0299 (1 HSPs)
scaffold0299 (15-102)||(6684-6770)
[»] scaffold0120 (1 HSPs)
scaffold0120 (15-120)||(20014-20119)
[»] scaffold0051 (1 HSPs)
scaffold0051 (17-102)||(30890-30974)
[»] scaffold0016 (1 HSPs)
scaffold0016 (15-83)||(207883-207951)
[»] scaffold0013 (1 HSPs)
scaffold0013 (15-120)||(2669-2775)
[»] scaffold0425 (1 HSPs)
scaffold0425 (36-83)||(186-233)
[»] scaffold1052 (1 HSPs)
scaffold1052 (37-83)||(2933-2979)
[»] scaffold0405 (1 HSPs)
scaffold0405 (36-102)||(9682-9747)
[»] scaffold0229 (1 HSPs)
scaffold0229 (36-102)||(11518-11583)
[»] scaffold0228 (1 HSPs)
scaffold0228 (15-148)||(18599-18735)
[»] scaffold0166 (1 HSPs)
scaffold0166 (37-83)||(10085-10131)
[»] scaffold0141 (1 HSPs)
scaffold0141 (36-102)||(14104-14169)
[»] scaffold0031 (2 HSPs)
scaffold0031 (36-102)||(36103-36168)
scaffold0031 (36-148)||(53589-53704)
[»] scaffold0525 (1 HSPs)
scaffold0525 (36-148)||(3842-3957)
[»] scaffold0036 (1 HSPs)
scaffold0036 (36-148)||(66382-66497)
[»] scaffold1296 (1 HSPs)
scaffold1296 (36-79)||(420-463)
[»] scaffold0761 (1 HSPs)
scaffold0761 (36-79)||(6355-6398)
[»] scaffold0676 (2 HSPs)
scaffold0676 (36-102)||(474-540)
scaffold0676 (36-79)||(4457-4500)
[»] scaffold0615 (1 HSPs)
scaffold0615 (36-79)||(2131-2174)
[»] scaffold0476 (2 HSPs)
scaffold0476 (36-79)||(5613-5656)
scaffold0476 (36-79)||(6808-6851)
[»] scaffold0410 (1 HSPs)
scaffold0410 (36-79)||(2195-2238)
[»] scaffold0393 (1 HSPs)
scaffold0393 (36-79)||(1521-1564)
[»] scaffold0216 (1 HSPs)
scaffold0216 (36-83)||(17154-17201)
[»] scaffold0124 (1 HSPs)
scaffold0124 (36-79)||(42654-42697)
[»] scaffold0022 (1 HSPs)
scaffold0022 (36-79)||(73813-73856)
[»] scaffold0372 (1 HSPs)
scaffold0372 (36-72)||(5147-5183)


Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 1598581 - 1598359
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1598581 catcatcagcttatacatagacatgcaacttagttaaataacatt-gcagcataatcaaatcacatcaagcttaaataacaaatcattttcaacaattct 1598483  T
Q  115 tgatcaattaacaataatcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatcc 213  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  1598482 tgatcaattaacaataatcaagtgaaggcaatcaaattcatatttcatttcattatcccttaacagttcataaaatcatcacagttcacagtcattatcc 1598383  T
Q  214 ctaataggtcatattagcacctaa 237  Q
    ||||||||||||||||||||||||    
T  1598382 ctaataggtcatattagcacctaa 1598359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 15942006 - 15941776
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| |||||||||||    
T  15942006 catcatcagcttatacttagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaaatttaa-taacaaatcattttcaacaattct 15941908  T
Q  115 tgatcaattaacaataa-tcaagtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| || |||||||||||| |    
T  15941907 tgatcaattagcaataaatcaagtaaaggcaatcaaatccatatttcacttcattatcctttaacagttcataaaatcttcaaagctcacagtcattacc 15941808  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
     ||||||||||  |||||||||||| ||||||    
T  15941807 tctaataggtctcattagcacctaaagttcct 15941776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 3833678 - 3833908
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-c 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || || |||||||| ||||||||||||||| |    
T  3833678 catcatcagcttattcatagacatgcaacttagttaaataacatttgcagcataatcaaatcacaac-aggtttaataacaagtcattctcaacaattgc 3833776  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||| ||    
T  3833777 ttgatcattcaacaataattcaagtaaaggcaatc-aatccatatttcatttcataatctcttaacagttcataaaaacttcacagttcacagtcatcat 3833875  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  3833876 ctttaataggtcacattagtacctaaagttcct 3833908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 38814388 - 38814618
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||| |||    
T  38814388 catcatcagcttattgatagacatgcaacttagttaaataacatttgcagcataatcaaatcacaac-aggtttaataacaaatcattctcaacaatttc 38814486  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| | ||||||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||||||    
T  38814487 ttgatcattcaacaataattcaagtaaaggcaatc-attccatatttcatttcataatctcttaacagttcataaaaacttcacagttcacagtcattat 38814585  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||  ||||| |||||| ||||||    
T  38814586 ctttaataggtcgcattagtacctaaagttcct 38814618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 17241998 - 17242206
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||| ||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||    
T  17241998 catgcaacatagtttaataacaattgcagcataatcaaatcacgtcaagcttaa-taacaaatcattctcaacaattcttgatcaatcaacaataattca 17242096  T
Q  135 agtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcac 233  Q
    ||||| ||||||| |||||||| |||| ||||| ||| ||||| |  |||||||  | |||||| || |||||| |||| ||||||||||  | ||||||    
T  17242097 agtaagggcaatc-aatccataattcacttcataatcacttaatatatcataaaggcttcacagttctcagtcaatatctctaataggtctcactagcac 17242195  T
Q  234 ctaaggttcct 244  Q
    |||| ||||||    
T  17242196 ctaaagttcct 17242206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 4589294 - 4589207
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctc 105  Q
    |||||| ||||| ||||  | |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  4589294 tcatcaacttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctc 4589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 19775353 - 19775440
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctc 105  Q
    |||||| ||||| ||||  | |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  19775353 tcatcaacttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctc 19775440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 8489573 - 8489487
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  8489573 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 8489487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 15464869 - 15464955
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  15464869 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 15464955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 16696789 - 16696880
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||| |||||||||    
T  16696789 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataaacaaatcacatcaag-ttaaagaacaaaacattctcaa 16696880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 5223068 - 5223154
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  ||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  5223068 catcatcaacttattcatactcatacaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 5223154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 16798156 - 16798039
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| ||||  |||||||| ||||| |||||||  |||| ||||||||||||||||||| ||| |||||||||||||| ||||||| |||    
T  16798156 catcatcaacttattcatactcatgcaacatagtttaataacaagtgcaacataatcaaatcacatcaaactt-aataacaaatcattttcaacaatttc 16798058  T
Q  114 ttgatcaattaacaataat 132  Q
    ||||||| | |||||||||    
T  16798057 ttgatcattcaacaataat 16798039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 11854442 - 11854507
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| |||||    
T  11854442 catgcaacttagttaaataacaattgcggcataatcaaatcacatcaagctt-aataacaattcatt 11854507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 15850164 - 15850052
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||||||||||||||||| |||||||||||||| |||| |||||| || |||||||| ||||| |||  | |||||||||| | |||||||| |||    
T  15850164 catgcaacttagttaaataacaattgcagcataatcagatcatatcaag-tttaataacaattcattttcacaatttcttgatcattcaacaataattca 15850066  T
Q  135 agtaaggcaatcaa 148  Q
    ||| | ||||||||    
T  15850065 agttatgcaatcaa 15850052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 12339470 - 12339556
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||| || ||||||| || |||||||| |||||    
T  12339470 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaattctcatcaag-tttaataacaattcatt 12339556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 16808983 - 16808866
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| ||||  |||||||  ||||| |||||||  |||| ||||||||||||||||||||||| ||||||||||||||  |||||| |||    
T  16808983 catcatcaacttattcatactcatgcaatatagtttaataacaagtgcaacataatcaaatcacatcaagctt-aataacaaatcatttgcaacaatttc 16808885  T
Q  114 ttgatcaattaacaataat 132  Q
    |||| || | |||||||||    
T  16808884 ttgaccattcaacaataat 16808866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 16750689 - 16750605
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||| ||||| ||||  | |||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  16750689 tcatcaacttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 16750605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 31097637 - 31097539
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataat 132  Q
    |||||||| ||||||| ||||| |||||||||||||| |||||||||  ||||| |||||||| ||||| ||||||| |||||||||| | |||||||||    
T  31097637 catgcaacatagttaattaacaattgcagcataatcagatcacatcaatagctt-aataacaattcattttcaacaatttcttgatcattcaacaataat 31097539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 11300846 - 11300802
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacat 80  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||    
T  11300846 catgcaacttagttaaataacaattgtagcataatcaaatcacat 11300802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 16865101 - 16865005
Alignment:
Q  148 aatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcacctaaggttcct 244  Q
    ||||||||  ||||||||| ||| ||||||| ||||||||||| |||||| ||| | ||||||||  | |||||||| ||||| |||||| ||||||    
T  16865101 aatccataaatcatttcataatctcttaacaattcataaaatcttcacagttcataatcattatctttgataggtcacattagtacctaaagttcct 16865005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 2897905 - 2897858
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  2897905 catgcaacttagttaaataacaatagcagcataatcagatcacatcaa 2897858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 14668584 - 14668631
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  14668584 catgcaacttagttaaataacaatagcagcataatcagatcacatcaa 14668631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 19726000 - 19725953
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  19726000 catgcaacttagttaaataacaatagcagcataatcagatcacatcaa 19725953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 4107479 - 4107414
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  4107479 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 4107414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 4111331 - 4111266
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  4111331 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 4111266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 15482666 - 15482802
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-t 111  Q
    |||||||| ||||| || |  |||||||||||||||| ||||| | |||||||||||| |||||||||  ||||| |||| ||| ||||| ||||||| |    
T  15482666 catcatcaacttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagctt-aatatcaattcattttcaacaatt 15482764  T
Q  112 tcttgatcaattaacaataa-tcaagtaaggcaatcaa 148  Q
    |||||| || | || ||||| |||||||| ||||||||    
T  15482765 tcttgagcattcaataataattcaagtaatgcaatcaa 15482802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 15964996 - 15965061
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  15964996 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 15965061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 15968920 - 15968985
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  15968920 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 15968985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 15972844 - 15972909
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  15972844 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 15972909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 19775792 - 19775857
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  19775792 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 19775857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 3403046 - 3403003
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  3403046 catgcaacttagttaaataacaatagcagcataatcagatcaca 3403003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 12172823 - 12172866
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  12172823 catgcaacttagttaaataacaatagcagcataatcagatcaca 12172866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 14665428 - 14665475
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | ||| |||||||| ||||||||||    
T  14665428 catgcaacttagttaaataacaatagcaacataatcagatcacatcaa 14665475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 15617401 - 15617448
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| |||| |||||    
T  15617401 catgcaacttagttaaataacaatagcagcataatcagatcatatcaa 15617448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 18384005 - 18383962
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  18384005 catgcaacttagttaaataacaatagcagcataatcagatcaca 18383962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 20461582 - 20461535
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||| ||||| | |||||||||||| ||||||||||    
T  20461582 catgcaacttagttaattaacaatagcagcataatcagatcacatcaa 20461535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 30065973 - 30066020
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| |||| |||||    
T  30065973 catgcaacttagttaaataacaatagcagcataatcagatcatatcaa 30066020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 11862820 - 11862862
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcac 78  Q
    |||||||||||||||||||||| | |||||||||||| |||||    
T  11862820 catgcaacttagttaaataacaatagcagcataatcagatcac 11862862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 37439718 - 37439653
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||| ||||||||||| ||| ||||||||| |||||||| |||||    
T  37439718 catgcaacttagtttaacaacaattgtagcataatcaattcatatcaagctt-aataacaattcatt 37439653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 9e-91; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 15 - 242
Target Start/End: Complemental strand, 17828684 - 17828457
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17828684 catcatcagcttatacatagacatgcaacttagttaattaacatttgcagcataatcaaatcacatcaagctt-aataacaaatcattctcaacaattct 17828586  T
Q  115 tgatcaattaacaataatcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatcc 213  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||||| ||||||||||||||     
T  17828585 tgatcaattaacaataatcaagtaaagacaatcaaatccatatttcatttcattatcccttaacaaatcataaaatcttcacagttcacagtcattatct 17828486  T
Q  214 ctaataggtcatattagcacctaaggttc 242  Q
    ||||||||||   ||||||||||| ||||    
T  17828485 ctaataggtctcgttagcacctaaagttc 17828457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 15538452 - 15538682
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-c 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||| ||||||||||||||| |    
T  15538452 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacaacaggtttaa-taacaattcattctcaacaatttc 15538550  T
Q  114 ttgatcaattaacaataa-tcaagtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||    
T  15538551 ttgatcattcaacaataactcaagtaaaggcaatcaa-tccatatttcatttcattatcccttaacagttcataaaatcttcactgttcacagtcattat 15538649  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    | ||||||||||  |||||||||||| ||||||    
T  15538650 ctctaataggtctcattagcacctaaagttcct 15538682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 24445608 - 24445433
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||  |||||||||||||||||||||||||    
T  24445608 catcatcagcttatacatagacatgcaacttagttaaataacatttacagcataatcaaatcacatc-aggtttcataacaaatcattctcaacaattct 24445510  T
Q  115 tgatcaattaacaataatcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatc 190  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24445509 tgatcaattgacaataatcacgtaaaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatc 24445433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 15531893 - 15532122
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || || |||||||| ||||||||||||| |||    
T  15531893 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacaac-aggtttaataacaattcattctcaacaatttc 15531991  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| || |||||||||||||    
T  15531992 ttgatcattcaacaataattcaagtaaaggcaatc-aatccatatttcatttcattatcccttaacagtt-ataaaatcttcatagttcacagtcattat 15532089  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    | ||||||||||  |||||||||||| ||||||    
T  15532090 ctctaataggtctcattagcacctaaagttcct 15532122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 23847117 - 23846887
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-c 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || | || |||||||||||||||||||||||| |    
T  23847117 catcatcagcttattcataaacatgcaacttagttaaataacatttgcagcataatcaaatcacaaca-gatttaataacaaatcattctcaacaatttc 23847019  T
Q  114 ttgatcaattaacaataat-caagtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | ||||||||| ||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||||||    
T  23847018 ttgatcattcaacaataattcaagtaaaggcaatcaa-tccatatttcatttcataatctcttaacagttcataaaaacttcacagttcacagtcattat 23846920  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  23846919 ctttaataggtcacattagtacctaaagttcct 23846887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 237
Target Start/End: Complemental strand, 16231556 - 16231354
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaac-aattcttgatcaattaacaataa-tc 133  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||| | || ||||| ||    
T  16231556 catgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcattttcaacaaattcttgatcattcaataataattc 16231458  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| || |||||| |||||||| |||| || ||  || ||||||| ||||||||| | |||||| || |||||| ||||  |||||||||  ||||| |    
T  16231457 aagtaaatgcaatc-aatccataattcactttatattcacttaacatttcataaaagcttcacagttctcagtcaatatctttaataggtctcattagta 16231359  T
Q  233 cctaa 237  Q
    |||||    
T  16231358 cctaa 16231354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 30308855 - 30308626
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| ||||  ||||||| |||||| ||||||| ||||| |||||||||||| |||| || || ||||||||||||||| |||||| |||    
T  30308855 catcatcaacttattcatactcatgcaaattagtttaataacaattgcaacataatcaaatcccatc-agatttaataacaaatcattcacaacaatttc 30308757  T
Q  114 ttgatcaattaacaataa-tcaagtaaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    ||||||| | |||||||| ||||||||  ||||| |||||||| |||| ||||| ||| ||||||| ||| ||||| | ||| || || |||||| ||||    
T  30308756 ttgatcattcaacaataattcaagtaatacaatc-aatccataattcacttcataatcacttaacaattcttaaaagcttcagagttctcagtcaatatc 30308658  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
      |||||||||  |||||||||||| ||||||    
T  30308657 tttaataggtctcattagcacctaaagttcct 30308626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 17055481 - 17055390
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  17055481 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaataacatcaa-cttaaataacaaatcattctcaa 17055390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 32605214 - 32605305
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  32605214 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcacaatcaaatcacatcaag-ttaaataacaaatcattctcaa 32605305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 32598682 - 32598773
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||    
T  32598682 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcacaatcaaatcacatcaag-tcaaataacaaatcattctcaa 32598773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 21387077 - 21387163
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  21387077 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 21387163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 23834197 - 23834407
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-tc 133  Q
    |||||||| ||||| ||||||| ||||| |||| |||||||||||||||||| |||||||||||||||||||||| |||||| ||| | |||||||| ||    
T  23834197 catgcaacatagtttaataacaattgcatcatagtcaaatcacatcaagctt-aataacaaatcattctcaacaatttcttggtcattcaacaataattc 23834295  T
Q  134 aagt-aaggcaatcaaatccat-atttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagc 231  Q
    |||| ||  ||||| | ||||| | |||| ||||| ||| ||||||| |||||||||   |||||| || |||||| ||||  |||||||||  |||||     
T  23834296 aagtaaatacaatc-agtccataaattcacttcataatcacttaacaattcataaaagattcacagttctcagtcaatatctttaataggtctcattagt 23834394  T
Q  232 acctaaggttcct 244  Q
    |||||| ||||||    
T  23834395 acctaaagttcct 23834407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 21383657 - 21383743
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |||||    
T  21383657 catcatcaacttattcatactcatgcaacttagttaaataacaattgcaacataatcaaatcacatcaagctt-aataacaattcatt 21383743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 223
Target Start/End: Original strand, 22044909 - 22045097
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-tc 133  Q
    ||||||||||||||  |||||| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||| |||||||||| |  | ||||| ||    
T  22044909 catgcaacttagtttgataacaattgcagcacaatcaaatcacatcaagctt-aataacaattcattttcaacaatttcttgatcattccataataattc 22045007  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtc 223  Q
    |||| || |||||| |||||||| |||| || || ||| |||||||  |||||||| | |||||| || |||||| ||||  |||||||||    
T  22045008 aagtaaatgcaatc-aatccataattcactttataatcacttaacatctcataaaagcttcacagttctcagtcaatatctttaataggtc 22045097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 14398210 - 14398124
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||| ||| |||||| |||||||| |||||    
T  14398210 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcgcataaagctt-aataacaattcatt 14398124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 24434166 - 24434109
Alignment:
Q  187 aatcctcacagatcacagtcattatccctaataggtcatattagcacctaaggttcct 244  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  24434166 aatcatcacagttcacagtcattatccctaataggtcatattagcacctaaagttcct 24434109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 18862727 - 18862662
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  18862727 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 18862662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 21410974 - 21411039
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  21410974 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 21411039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 21805466 - 21805531
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  21805466 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 21805531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 21828096 - 21828031
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  21828096 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 21828031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 30643381 - 30643338
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  30643381 catgcaacttagttaaataacaatagcagcataatcagatcaca 30643338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 18619640 - 18619712
Alignment:
Q  172 cttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcacctaaggttcct 244  Q
    |||||||  |||||||| | |||||| || |||||| ||||  |||||||||  |||||||||||||||||||    
T  18619640 cttaacatctcataaaagcttcacagttctcagtcaatatctttaataggtctcattagcacctaaggttcct 18619712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 45938152 - 45938381
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45938152 catcatcagcttatacatagacatgcatcttagttaaataacatttgcagcataatcaaatcacatcaagcttaa-taacaaatcattctcaacaattct 45938250  T
Q  115 tgatcaattaacaataatcaagtaaggcaatcaaatccatatttcatttc-attatcccttaacagttcataaaatcctcacagatcacagtcattatcc 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||| ||| |||||| ||      
T  45938251 tgatcaattaacaataatcaagtaaggcaatcaaatccatatttcatttcaattatctcttaacagttcgtaaaatcttcacagttcatagtcatcattt 45938350  T
Q  214 ctaataggtcatattagcacctaaggttcct 244  Q
    ||||||||||  |||||||||||| ||||||    
T  45938351 ctaataggtctcattagcacctaaagttcct 45938381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 19757703 - 19757473
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-c 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||||||||||||||| |    
T  19757703 catcatcagcttattcataaacatgcaacttagttaaataacatttgcagcataatcaaatcacaacaggtttaa-taacaaatcattctcaacaatttc 19757605  T
Q  114 ttgatcaattaacaataat-caagtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | ||||||||| ||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||||||    
T  19757604 ttgatcattcaacaataattcaagtaaaggcaatcaa-tccatatttcatttcataatctcttaacagttcataaaaacttcacagttcacagtcattat 19757506  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  19757505 ctttaataggtcacattagtacctaaagttcct 19757473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 19782103 - 19782333
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||| |||    
T  19782103 catcatcagcttattcataaacatgcaacttagttaaataacatttgcagcataatcaaatcacaac-aggtttaataacaaatcattctcaacaatttc 19782201  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||||||    
T  19782202 ttgatcattcaacaataattcaagtaaaggcaatc-aatccatatttcatttcataatctcttaacagttcataaaaacttcacagttcacagtcattat 19782300  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  19782301 ctttaataggtcacattagtacctaaagttcct 19782333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 16243502 - 16243272
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||    
T  16243502 catcatcagcttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatc-aggtttaataacaaatcattctcaacaatttc 16243404  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||||||||  ||| ||||||| ||||||||| | |||||| |||||||||||||    
T  16243403 ttgatcattcaacaataattcaagtaaaggcaatc-aatccatatttcatttcacaatctcttaacaattcataaaaacttcacagttcacagtcattat 16243305  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  16243304 ctttaataggtcacattagtacctaaagttcct 16243272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 26243767 - 26243537
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  26243767 catcatcagcttattcataaacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagctt-aataacaaatcattctcaacaatttc 26243669  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| | ||||||||||||||||| ||| ||||||| ||||||||  | |||||| || |||||| |||    
T  26243668 ttgatcattcaacaataattcaagtaaaggcaatc-attccatatttcatttcataatctcttaacaattcataaaggcttcacagttctcagtcaatat 26243570  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    | ||||||||||  | |||||||||| ||||||    
T  26243569 ctctaataggtctcactagcacctaaagttcct 26243537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 23139275 - 23139504
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23139275 catcatcagcttattcataaacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagctt-aataacaaatcattctcaacaattct 23139373  T
Q  115 tgatcaattaacaataa-tcaagta-aggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    ||||||||||||||||| |||||||  ||||||| |||||||| |||| ||||| ||| ||||| |  |||||||  | |||||| || |||||| ||||    
T  23139374 tgatcaattaacaataattcaagtatgggcaatc-aatccataattcacttcataatcacttaatatatcataaaggcttcacagttctcagtcaatatc 23139472  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
     ||||||||||  | |||||||||| ||||||    
T  23139473 tctaataggtctcactagcacctaaagttcct 23139504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 15 - 242
Target Start/End: Original strand, 2014782 - 2015010
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||| |||||| |||    
T  2014782 catcatcagcttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatc-aggtttaataacaaatcattcgcaacaatttc 2014880  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| |  ||||||| |||||| ||||||||| ||||||||||||||||||| ||  ||||||| ||||||||| | |||||| |||||||||||||    
T  2014881 ttgatcattccacaataattcaagtaaaggcaatc-aatccatatttcatttcataatttcttaacaattcataaaaacttcacagttcacagtcattat 2014979  T
Q  212 ccctaataggtcatattagcacctaaggttc 242  Q
    |  ||||||||||  |||| |||||| ||||    
T  2014980 ctttaataggtcaccttagtacctaaagttc 2015010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 9530438 - 9530667
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    ||||||||| || | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  9530438 catcatcagtttgttcataaaaatgcaacttagttaaatgacatttgcagcataatcaaatcacatcaagctt-aataataaatcattctcaacaattct 9530536  T
Q  115 tgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    ||||||||||||||||| || ||| ||||||||| | ||||||||||||||| | ||| |||||||  |||||||| | |||||| || | |||||||||    
T  9530537 tgatcaattaacaataattcgagtaaaggcaatc-actccatatttcatttcctaatcacttaacaaatcataaaagcttcacagttctcggtcattatc 9530635  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
      |||||||||  ||||| |||||||||||||    
T  9530636 tttaataggtctcattagtacctaaggttcct 9530667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 18222459 - 18222250
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-cttgatcaattaacaataa-tc 133  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||||| | || ||||| ||    
T  18222459 catgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcattttcaacaattccttgatcattcaataataattc 18222361  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| ||  ||||| |||||||| |||| || ||  || |||||||  |||||||| | |||||| || |||||||||||  |||||||||  |||||||    
T  18222360 aagtaaatacaatc-aatccataattcactttatattcacttaacatatcataaaagcttcacagttctcagtcattatctttaataggtctcattagca 18222262  T
Q  233 cctaaggttcct 244  Q
    ||||| ||||||    
T  18222261 cctaaagttcct 18222250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 18236895 - 18237126
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| |||    
T  18236895 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatc-aggtttaataacaaatcattctcaacaatttc 18236993  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcat-aaaatcctcacagatcacagtcatta 210  Q
    || |||| | |||||||| |||||| ||  ||||| |||||||| |||| ||||| ||| ||||||| ||||| |||||| ||| || || |||||  ||    
T  18236994 ttaatcattcaacaataattcaagtaaatacaatc-aatccataattcacttcataatcacttaacaattcataaaaatcttcaaagttctcagtccata 18237092  T
Q  211 tccctaataggtcatattagcacctaaggttcct 244  Q
    ||  || |||||| |||| |||||||| ||||||    
T  18237093 tctttagtaggtcttatttgcacctaaagttcct 18237126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 17152567 - 17152359
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-cttgatcaattaacaataa-tc 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||||| | || ||||| ||    
T  17152567 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagctt-aataacaattcatt-tcaacaattccttgatcattcaataataattc 17152470  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| ||  ||||| |||||||| |||| || ||  || |||||||  |||||||||| |||||| || |||||| ||||  |||||||||  |||| ||    
T  17152469 aagtaaatacaatc-aatccataattcactttatattcacttaacatatcataaaatcttcacagttctcagtcaatatctttaataggtctcattaaca 17152371  T
Q  233 cctaaggttcct 244  Q
    ||||| ||||||    
T  17152370 cctaaagttcct 17152359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 42997552 - 42997426
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  |||    
T  42997552 catcatcaacttattcataatcatgcaactcagttaaataacatttgcagcataatcaaatcacatcaag-ttaaataacaaatcattctcaatagtttc 42997454  T
Q  114 ttgatcaattaacaataa-tcaagtaag 140  Q
    ||||||| ||||||| || |||||||||    
T  42997453 ttgatcatttaacaacaattcaagtaag 42997426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 28569546 - 28569455
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28569546 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaa-cttaaataacaaatcattctcaa 28569455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 14708736 - 14708645
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  14708736 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttagataacaaatcattctcaa 14708645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 3412802 - 3413030
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| | ||||||||||||||||||||| || |||||||||||||||||||||| || |||    
T  3412802 catcatcaacttattcatactcatgcaacttagtttaataacaatagcagcataatcaaatcacatc-aggttaaataacaaatcattctcaataatttc 3412900  T
Q  114 ttgatcaattaacaataa-tcaagtaaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    ||||||| | |||||||| ||||  ||   |||  |||||||| |||| ||||| ||| ||||||| ||||| ||| | |||||| || || ||| ||||    
T  3412901 ttgatcattcaacaataattcaataaatataattcaatccataattcacttcataatcacttaacaattcat-aaagcttcacagttctca-tcaatatc 3412998  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
      |||||||||  ||||| |||||||||||||    
T  3412999 tttaataggtctcattagtacctaaggttcct 3413030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 18228934 - 18228725
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-cttgatcaattaacaataa-tc 133  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||  ||||||| |||||  |||||||| |||||||| | || ||||| ||    
T  18228934 catgcaacttagttaaataaaaattgcagcataatcaaatcacatcaagctt-cataacaattcatttccaacaattccttgatcattcaataataattc 18228836  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| ||| ||||| |||||||| |||| || ||  || |||||||  || ||||| | |||||| || |||||||||||  |||||||||  |||||||    
T  18228835 aagtaaagacaatc-aatccataattcactttatattcacttaacatatcgtaaaagcttcacagttctcagtcattatctttaataggtctcattagca 18228737  T
Q  233 cctaaggttcct 244  Q
    ||||| ||||||    
T  18228736 cctaaagttcct 18228725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 1951842 - 1951758
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatca 120  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||    
T  1951842 catgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcattttcaacaatttcttgatca 1951758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 15224800 - 15224887
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctc 105  Q
    |||||| ||||| ||||  | |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  15224800 tcatcaacttattcatattcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctc 15224887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 43256514 - 43256428
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| |||||    
T  43256514 catcatcaacttattcatactcatgcaacttagttaaataacaattgtagcataatcaaatcacatcaagctt-aataacaattcatt 43256428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 18602833 - 18602742
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||| ||| ||||| ||||  |||| ||||||||| | ||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  18602833 catcgtcaacttattcatactcatgaaacttagtttagtaacaattgcagcataatcaaatcacatc-aggttaaacaacaaatcattctcaa 18602742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 10712877 - 10712942
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  10712877 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 10712942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 10926647 - 10926712
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  10926647 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 10926712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 14954249 - 14954196
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||||||||||| || |||| ||||||||||||||| ||| |||||||||||    
T  14954249 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagcttaa 14954196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 17810296 - 17810411
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||||||||| | |||||||||||| |||| ||||  ||||| |||| ||| ||||| ||||||| ||| |||||| | || |||||     
T  17810296 catgcaacttagttaaataacaatagcagcataatcagatcatatcaacagctt-aatatcaattcattttcaacaacttcctgatcattcaataataat 17810394  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  17810395 tcaagtaatgcaatcaa 17810411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 22634525 - 22634418
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-t 111  Q
    |||||||| ||||| || |  |||||||||||||||| ||||| | |||||||||||| |||||||||  ||||| |||| ||| ||||| ||||||| |    
T  22634525 catcatcaacttattcagacgcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagctt-aatatcaattcattttcaacaatt 22634427  T
Q  112 tcttgatca 120  Q
    |||||||||    
T  22634426 tcttgatca 22634418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 25689894 - 25689947
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||||||||||| || |||| ||||||||||||||| ||| |||||||||||    
T  25689894 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagcttaa 25689947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 9556554 - 9556601
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| |||| |||||    
T  9556554 catgcaacttagttaaataacaatagcagcataatcagatcatatcaa 9556601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 16488167 - 16488124
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  16488167 catgcaacttagttaaataacaatagcagcataatcagatcaca 16488124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 18609405 - 18609319
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||| ||| ||||| ||||  |||| ||||||||| | ||||| ||||||||||||||||||||||  || ||||| |||||||||||    
T  18609405 catcgtcaacttattcatactcatgaaacttagtttagtaacaattgcagcataatcaaatcacat-gaggttaaacaacaaatcatt 18609319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 20157549 - 20157502
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    ||||||| |||||||||||||| | |||||||||||| ||||||||||    
T  20157549 catgcaaattagttaaataacaatagcagcataatcagatcacatcaa 20157502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 36134044 - 36133997
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||| ||||| | |||||||||||| ||||||||||    
T  36134044 catgcaacttagttaattaacaatagcagcataatcagatcacatcaa 36133997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 13813108 - 13813072
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatca 72  Q
    |||||||||||||||||||||| | ||||||||||||    
T  13813108 catgcaacttagttaaataacaatagcagcataatca 13813072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 9907 - 10137
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||    
T  9907 catcatcagcttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatc-aggtttaataacaaatcattctcaacaatttc 10005  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||||||    
T  10006 ttgatcattcaacaataattcaagtaaaggcaatc-aatccatatttcatttcataatctcttaacagttcataaaaacttcacagttcacagtcattat 10104  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  10105 ctttaataggtcacattagtacctaaagttcct 10137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 13149158 - 13149388
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||    
T  13149158 catcatcagcttattcatacacatgcaacttagttaaataacatttgcagcataatcaaatcacatc-aggtttaataacaaatcattctcaacaatttc 13149256  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||||||    
T  13149257 ttgatcattcaacaataattcaagtaaaggcaatc-aatccatatttcatttcataatctcttaacagttcataaaaacttcacagttcacagtcattat 13149355  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  13149356 ctttaataggtcacattagtacctaaagttcct 13149388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 238
Target Start/End: Original strand, 6801237 - 6801440
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||| ||||| ||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  6801237 catgcaacatagtttaataacaattgcagcataatcaaatcatgtcaagcttaa-taacaaatcattctcaacaattcttgatcaattaacaataattca 6801335  T
Q  135 agtaa-ggcaatcaaatccat-atttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    ||||| ||||||| ||||||| |||||| ||||| ||| ||||| |  ||||||   | |||||| || |||||| |||| | ||||||||  | |||||    
T  6801336 agtaagggcaatc-aatccataatttcacttcataatcacttaatatatcataatggcttcacagttctcagtcaatatctccaataggtctcactagca 6801434  T
Q  233 cctaag 238  Q
    ||||||    
T  6801435 cctaag 6801440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 19139 - 18930
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-cttgatcaattaacaataa-tc 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||||| | || ||||| ||    
T  19139 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagctt-aataacaattcattttcaacaattccttgatcattcaataataattc 19041  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| ||  ||||| |||||||| |||| || ||  || |||||||  |||||||| | |||||| || |||||| ||||  |||||||||  |||||||    
T  19040 aagtaaatacaatc-aatccataattcactttatattcacttaacatatcataaaagcttcacagttctcagtcaatatctttaataggtctcattagca 18942  T
Q  233 cctaaggttcct 244  Q
    ||||| ||||||    
T  18941 cctaaagttcct 18930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 18556976 - 18557093
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || || |||| |||||||||||||| |  |||    
T  18556976 catcatcaacttatacatagtcatgcaacttagttaaataacatttgcagcataatcaaatcacatc-aggttcaatagcaaatcattctcaatagtttc 18557074  T
Q  114 ttgatcaattaacaataat 132  Q
    ||||||| |||||||||||    
T  18557075 ttgatcatttaacaataat 18557093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 16724732 - 16724503
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| |||||||||||| |||||||||| || ||||||||||| |||||||||| | ||||    
T  16724732 catcatcaacttattcatactcatgcaacttagtttaataacaattgcagcataatgaaatcacatc-aggttaaataacaagtcattctcaatagttct 16724634  T
Q  115 tgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    |||||| | |||||||| |||| | ||   |||  |||||||| |||| ||||| ||| ||||||| ||||||||| | |||||| || |||||| ||||    
T  16724633 tgatcattcaacaataattcaaataaatataattcaatccataattcacttcataatcacttaacaattcataaaa-cttcacagttctcagtcaatatc 16724535  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
      |||||||||  ||||| |||||||||||||    
T  16724534 tttaataggtctcattagtacctaaggttcct 16724503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 17701746 - 17701517
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| |||||||||||| |||||||||| || ||||||||||| |||||||||| | ||||    
T  17701746 catcatcaacttattcatactcatgcaacttagtttaataacaattgcagcataatgaaatcacatc-aggttaaataacaagtcattctcaatagttct 17701648  T
Q  115 tgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    |||||| | |||||||| |||| | ||   |||  |||||||| |||| ||||| ||| ||||||| ||||||||| | |||||| || |||||| ||||    
T  17701647 tgatcattcaacaataattcaaataaatataattcaatccataattcacttcataatcacttaacaattcataaaa-cttcacagttctcagtcaatatc 17701549  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
      |||||||||  ||||| |||||||||||||    
T  17701548 tttaataggtctcattagtacctaaggttcct 17701517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 8917430 - 8917660
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| ||||| ||||||||||||||||| || || ||||||||||||||| |||||| |||    
T  8917430 catcatcaacttattcatactcatgcaacttagtttaataacaattgcaacataatcaaatcacatc-aggtttaataacaaatcattcacaacaatttc 8917528  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| || |||||| |||||||| |||| ||||| ||| ||||||| ||| ||||| | ||| || || | |||| |||    
T  8917529 ttgatcattcaacaataattcaagtaaatgcaatc-aatccataattcacttcataatcacttaacaattcttaaaagcttcagagttctcggtcaatat 8917627  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||  ||||||||| || ||||||    
T  8917628 ctttaataggtctcattagcacccaaagttcct 8917660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 11987236 - 11987446
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attcttgatcaattaacaat-aatc 133  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||  |||||||||| | || ||| ||||    
T  11987236 catgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaaatcattttcaacagtttcttgatcattcaataataaatc 11987334  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcatta-tcccttaacagttcataaaatcctcacagatcacagtcattatc-cctaataggtcatattag 230  Q
    |||| || |||||| |||||||| |||| || |||| || ||||||| ||||||||| | |||||| || |||||| ||||   |||||||||  | |||    
T  11987335 aagtaaatgcaatc-aatccataattcactt-attattcacttaacatttcataaaagcttcacagttctcagtcaatatcttttaataggtctcactag 11987432  T
Q  231 cacctaaggttcct 244  Q
     |||||||||||||    
T  11987433 tacctaaggttcct 11987446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 16275495 - 16275586
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||    
T  16275495 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcatactcaa 16275586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 14216918 - 14217035
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |  |||    
T  14216918 catcatcaacttattcatattcatgcaacttagttcaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcattctcaatagtttc 14217016  T
Q  114 ttgatcaattaacaataat 132  Q
    ||||||| | |||||||||    
T  14217017 ttgatcattcaacaataat 14217035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 15728328 - 15728445
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |  |||    
T  15728328 catcatcaacttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcattctcaatagtttc 15728426  T
Q  114 ttgatcaattaacaataat 132  Q
    ||||||| | |||||||||    
T  15728427 ttgatcattcaacaataat 15728445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 9593370 - 9593454
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatca 120  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||    
T  9593370 catgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcattttcaacaatttcttgatca 9593454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 13461764 - 13461995
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| ||||  ||||||| |||||| ||| ||| ||||||||||||||||||||||| || || ||||||||||||||| |||||| |||    
T  13461764 catcatcaacttattcatactcatgcaaattagtttaattacaattgcagcataatcaaatcacatc-aggtttaataacaaatcattcacaacaatttc 13461862  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccat-atttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcatta 210  Q
    ||||||| | |||||||| |||||| ||  ||||| ||||||| |||||| ||||| |||  |||||| ||||||||| | ||| || || ||||||  |    
T  13461863 ttgatcattcaacaataattcaagtaaaaacaatc-aatccataatttcacttcataatcaattaacaattcataaaagcttcagagttctcagtcaaca 13461961  T
Q  211 tccctaataggtcatattagcacctaaggttcct 244  Q
    ||  |||||||||  |||||||||||| ||||||    
T  13461962 tctttaataggtctcattagcacctaaagttcct 13461995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 35151609 - 35151700
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| |||||    
T  35151609 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcatactcaa 35151700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 13918881 - 13918795
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  13918881 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 13918795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 16457438 - 16457354
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatca 120  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  16457438 catgcaacatagtttaataacaattgcagcataatcaaatcacatcaagctt-aataacaaatcattttcaacaatttcttgatca 16457354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 1859187 - 1859113
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  1859187 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacaacaagcttaa 1859113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 25927604 - 25927530
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  25927604 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaaacttaa 25927530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 7519434 - 7519373
Alignment:
Q  40 caacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  7519434 caacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 7519373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 2530491 - 2530387
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatca-catcaagcttaaataacaaatcattctcaacaa-ttct 114  Q
    |||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||| ||||| ||| ||| ||||    
T  2530491 tcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcataatcaagctt-aataacaattcattttcagcaatttct 2530393  T
Q  115 tgatca 120  Q
    ||||||    
T  2530392 tgatca 2530387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 18425443 - 18425527
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||| ||||| ||||  | |||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  18425443 tcatcaacttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 18425527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 13635572 - 13635436
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-t 111  Q
    |||||||| ||||| || |  |||||||||||||||| ||||| | |||||||||||| |||||||||  ||||| |||| ||| ||||| ||||||| |    
T  13635572 catcatcaacttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagctt-aatatcaattcattttcaacaatt 13635474  T
Q  112 tcttgatcaattaacaataa-tcaagtaaggcaatcaa 148  Q
    ||||||||| | || ||||| |||||||| ||||||||    
T  13635473 tcttgatcattcaataataattcaagtaatgcaatcaa 13635436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 12318130 - 12318266
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-t 111  Q
    |||||||| ||||| || |  |||||||||||||||| ||||| | |||||||||||| |||||||||  ||||| |||| ||| ||||| ||||||| |    
T  12318130 catcatcatcttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatcaacagctt-aatatcaattcattttcaacaact 12318228  T
Q  112 tcttgatcaattaacaataa-tcaagtaaggcaatcaa 148  Q
    |||| |||| | || ||||| |||||||| ||||||||    
T  12318229 tcttaatcattcaataataattcaagtaatgcaatcaa 12318266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 16583259 - 16583395
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-t 111  Q
    |||||||| ||||| || |  |||||||| ||||||| ||||| | |||||||||||| |||||||||  ||||| |||| ||| ||||| ||||||| |    
T  16583259 catcatcaacttattcagactcatgcaacgtagttaattaacaatagcagcataatcagatcacatcaacagctt-aatatcaattcattttcaacaatt 16583357  T
Q  112 tcttgatcaattaacaataa-tcaagtaaggcaatcaa 148  Q
    ||| ||||| | |||||||| |||||||| ||||||||    
T  16583358 tctcgatcattcaacaataattcaagtaatgcaatcaa 16583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 45170088 - 45170023
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  45170088 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 45170023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 11312672 - 11312787
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||| ||||| | |||||||||||| |||||||||  ||||| |||| ||| ||||  ||||||| |||||||||| | || |||||     
T  11312672 catgcaacttagttaattaacaatagcagcataatcagatcacatcaacagctt-aatatcaattcatcttcaacaacttcttgatcattcaataataat 11312770  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  11312771 tcaagtaatgcaatcaa 11312787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 15580694 - 15580762
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||| ||||| || |  |||||||||||||||||||||  | |||||||||||| ||||||||||    
T  15580694 catcatcatcttattcagactcatgcaacttagttaaataacgatagcagcataatcagatcacatcaa 15580762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 2832531 - 2832484
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| ||| ||||||    
T  2832531 catgcaacttagttaaataacaatagcagcataatcagatcccatcaa 2832484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 9751844 - 9751797
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| |||| |||||    
T  9751844 catgcaacttagttaaataacaatagcagcataatcagatcatatcaa 9751797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 39722290 - 39722337
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| |||| |||||    
T  39722290 catgcaacttagttaaataacaatagcagcataatcagatcatatcaa 39722337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 26292419 - 26292455
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatca 72  Q
    |||||||||||||||||||||| | ||||||||||||    
T  26292419 catgcaacttagttaaataacaatagcagcataatca 26292455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 39267989 - 39267953
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatca 72  Q
    |||||||||||||||||||||| | ||||||||||||    
T  39267989 catgcaacttagttaaataacaatagcagcataatca 39267953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 33409232 - 33409462
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||| |||    
T  33409232 catcatcagcttattcatagacatgcaacttagttaaataacatttgcagcataatcaaatcacaac-aggtttaataacaaatcattctcaacaatttc 33409330  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||||||    
T  33409331 ttgatcattcaacaataattcaagtaaaggcaatc-aatccatatttcatttcataatctcttaacagttcataaaaacttcacagttcacagtcattat 33409429  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  33409430 ctttaataggtcacattagtacctaaagttcct 33409462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 21340847 - 21340639
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||     
T  21340847 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagctt-aataacaaatcattctaaacaattcttgatcaattaacaataattcg 21340749  T
Q  135 agt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcac 233  Q
    ||| ||||||||| | ||||||||||||||||| ||||||||||| |||| |||  | |||||| || ||||||||||| ||||||||||  | ||||||    
T  21340748 agtaaaggcaatc-actccatatttcatttcataatcccttaacaattcaaaaaggcttcacagttcccagtcattatctctaataggtctcactagcac 21340650  T
Q  234 ctaaggttcct 244  Q
    |||| ||||||    
T  21340649 ctaaagttcct 21340639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 15 - 242
Target Start/End: Original strand, 16674156 - 16674384
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||| |||    
T  16674156 catcatcagcttattcttaaacatgcaacttagttaaataacatttgcagcataatcaaatcacaac-aggtttaataacaaatcattctcaacaatttc 16674254  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| |||| ||||||||||||||  || ||||||||||||||||| | | |||| |||||||||||||    
T  16674255 ttgatcattcaacaataattcaagtaaaggcaatc-aatctatatttcatttcatagtctcttaacagttcataaaaactttacagttcacagtcattat 16674353  T
Q  212 ccctaataggtcatattagcacctaaggttc 242  Q
    |  |||||||||| ||||| |||||| ||||    
T  16674354 ctttaataggtcacattagtacctaaagttc 16674384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 244
Target Start/End: Complemental strand, 17718538 - 17718311
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttctt 115  Q
    |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| | || ||||||| |||||||||||||| |||||    
T  17718538 tcatcagcttattcata-acatgcaacttagttaaataacatttgccgcataatcaaatcacatcatg-ttcaataacagatcattctcaacaatttctt 17718441  T
Q  116 gatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatcc 213  Q
    ||||| | || ||||| |||||| |||| |||| ||| ||||||||||||||| ||| || |||||||||||||| | |||||| ||||||||| ||||     
T  17718440 gatcattcaataataattcaagtaaaggaaatc-aattcatatttcatttcataatctctaaacagttcataaaaacttcacagttcacagtcaatatct 17718342  T
Q  214 ctaataggtcatattagcacctaaggttcct 244  Q
     |||||||||  ||||| |||||| ||||||    
T  17718341 ttaataggtctcattagtacctaaagttcct 17718311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 236
Target Start/End: Complemental strand, 26666211 - 26666011
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||| ||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||    
T  26666211 catgcaacatagtttaataacaattgcagcataatcaaatcacgtcaagcttaa-taacaaatcattctcaacaattcttgatcaatcaacaataattca 26666113  T
Q  135 agtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcac 233  Q
    ||||| ||||||| |||||||| |||| ||||| ||| ||||| |  |||||||  | |||||| || |||||| |||| ||||||||||  | ||||||    
T  26666112 agtaagggcaatc-aatccataattcacttcataatcacttaatatatcataaaggcttcacagttctcagtcaatatctctaataggtctcactagcac 26666014  T
Q  234 cta 236  Q
    |||    
T  26666013 cta 26666011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 236
Target Start/End: Complemental strand, 26937808 - 26937608
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||| ||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||    
T  26937808 catgcaacatagtttaataacaattgcagcataatcaaatcacgtcaagcttaa-taacaaatcattctcaacaattcttgatcaatcaacaataattca 26937710  T
Q  135 agtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcac 233  Q
    ||||| ||||||| |||||||| |||| ||||| ||| ||||| |  |||||||  | |||||| || |||||| |||| ||||||||||  | ||||||    
T  26937709 agtaagggcaatc-aatccataattcacttcataatcacttaatatatcataaaggcttcacagttctcagtcaatatctctaataggtctcactagcac 26937611  T
Q  234 cta 236  Q
    |||    
T  26937610 cta 26937608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 37 - 237
Target Start/End: Original strand, 20232577 - 20232777
Alignment:
Q  37 atgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tcaa 135  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||| |||||||| ||||    
T  20232577 atgcaacatagtttaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcattctcaacaattattgatcaatcaacaataattcaa 20232675  T
Q  136 gt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcacc 234  Q
    || ||||||||| |||||||| |||| ||||| ||| ||||| |  |||||||  | |||||| || |||||| ||||   |||||||| |||||| |||    
T  20232676 gtaaaggcaatc-aatccataattcacttcataatcacttaatatatcataaaggcttcacagttctcagtcaatatcttaaataggtcttattagtacc 20232774  T
Q  235 taa 237  Q
    |||    
T  20232775 taa 20232777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 223
Target Start/End: Complemental strand, 24533128 - 24532941
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||| ||||| ||||||| ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||    
T  24533128 catgcaacatagtttaataacaattgcaacataatcaaatcacgtcaagcttaa-taacaaatcattctcaacaattcttgatcaatcaacaataattca 24533030  T
Q  135 agtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtc 223  Q
    ||||| ||||||| |||||||| |||| ||||| ||| ||||  |  |||||||  | |||||| || |||||| |||| ||||||||||    
T  24533029 agtaagggcaatc-aatccataattcacttcataatcacttagtatatcataaaggcttcacagttctcagtcaatatctctaataggtc 24532941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 18784071 - 18784281
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-tc 133  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||| |||| | |||||||| ||    
T  18784071 catgcaacatagtttaataacaattgcagcataatcaaatcacatcaagctt-aataacaaatcattttcaacaatttctttatcattcaacaataattc 18784169  T
Q  134 aagt-aaggcaatcaaatccat-atttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagc 231  Q
    |||| ||  ||||| ||||||| |||||| ||||| ||| || |||| ||||||||| |||||||| || |||||| ||||  |||| ||||  ||||||    
T  18784170 aagtaaatacaatc-aatccataatttcacttcataatcactgaacaattcataaaagcctcacagttctcagtcaatatctttaattggtctcattagc 18784268  T
Q  232 acctaaggttcct 244  Q
    |||||| ||||||    
T  18784269 acctaaagttcct 18784281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 18774228 - 18774438
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-tc 133  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| | |||||||| ||    
T  18774228 catgcaacatagtttaataacaattgcagcataatcaaatcacatcaagctt-aataacaaatcattttcaacaatttcttgatcattcaacaataattc 18774326  T
Q  134 aagt-aaggcaatcaaatccat-atttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagc 231  Q
    |||| ||  ||||| ||||||| |||||| ||||| ||| || |||| ||||||||| | |||||| || |||  | ||||  |||||||||  ||||||    
T  18774327 aagtaaatacaatc-aatccataatttcacttcataatcactgaacaattcataaaagcttcacagttctcaggtaatatctttaataggtctcattagc 18774425  T
Q  232 acctaaggttcct 244  Q
    |||||| ||||||    
T  18774426 acctaaagttcct 18774438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 21885291 - 21885200
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21885291 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctcaa 21885200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 42805445 - 42805654
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-cttgatcaattaacaataa-tc 133  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||||| |||| ||||| ||    
T  42805445 catgcaacttggttaaataacatttgcagcataatcaaatcacatcaagctt-aataacaattcattttcaacaattccttgatcatttaataataattc 42805543  T
Q  134 aagtaaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcac 233  Q
    ||||||   ||   |||||||| |||| || ||  || |||||||  |||||||| | |||||| || |||||| ||||  |||||||||  | | ||||    
T  42805544 aagtaaataaaatcaatccataattcactttatattcacttaacatatcataaaagcttcacagttctcagtcaatatctttaataggtctcaatggcac 42805643  T
Q  234 ctaaggttcct 244  Q
    |||| ||||||    
T  42805644 ctaaagttcct 42805654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 26742827 - 26742751
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  26742827 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaggctt-aataacaactcattctcaacaattc 26742751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 4036223 - 4036314
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  4036223 catcatcaacttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcattctcaa 4036314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 25229508 - 25229417
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  25229508 catcatcaacttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcattctcaa 25229417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 25293664 - 25293573
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  25293664 catcatcaacttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcattctcaa 25293573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 20911272 - 20911186
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  20911272 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 20911186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 10752949 - 10753036
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctc 105  Q
    |||||| ||||| ||||  | |||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  10752949 tcatcaacttattcatactcttgcaacttagttaaataacaattgcagcataattaaatcacatcaag-ttaaataacaaatcattctc 10753036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 26172468 - 26172559
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||  ||||  ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||    
T  26172468 catcatcaacttaatcataatcattcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcgttctcaa 26172559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 18355961 - 18356047
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||| |||||||||||||||||||| || |||||||| |||||    
T  18355961 catcatcaacttattcatactcatgcaacttagttaaataacaattgcaacataatcaaatcacatcaag-tttaataacaattcatt 18356047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 10753388 - 10753453
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  10753388 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 10753453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 24767634 - 24767588
Alignment:
Q  37 atgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||||    
T  24767634 atgcaacttagttaaataacaatagcagcataatcagatcacatcaa 24767588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 23535690 - 23535622
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||| ||||| || |  |||||||||||||||||||||| | |||||||||||| |||| |||||    
T  23535690 catcatcaacttattcagactcatgcaacttagttaaataacaatagcagcataatcagatcatatcaa 23535622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 17410464 - 17410511
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||| ||||| | |||||||||||| ||||||||||    
T  17410464 catgcaacttagttaattaacaatagcagcataatcagatcacatcaa 17410511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 21366754 - 21366711
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  21366754 catgcaacttagttaaataacaatagcagcataatcagatcaca 21366711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 18855561 - 18855333
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    ||||||||| |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18855561 catcatcagtttattcata-acatgcaacttagttaaacaacatttgcagcataatcaaatcacatcaagctt-aataacaaatcattctcaacaattct 18855464  T
Q  115 tgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    ||||||||||||||||| |||||| ||||||||| | | ||||||||||||||| ||| |||||||  |||||||| | |||||| || |||||||||||    
T  18855463 tgatcaattaacaataattcaagtaaaggcaatc-acttcatatttcatttcataatcacttaacaaatcataaaagcttcacagttctcagtcattatc 18855365  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
     ||||||||||  | |||||||||| ||||||    
T  18855364 tctaataggtctcactagcacctaaagttcct 18855333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 19928604 - 19928374
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||    
T  19928604 catcatcagattattcataaacatgcaacttagttaaataacatttgcagcataatcaaatcacatc-aggtttaataacaaatcattctcaacaatttc 19928506  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||| | ||| ||||| ||||||||||||||||||| ||| | ||||| ||||||||| | |||||| |||||||||||||    
T  19928505 ttgatcattcaacaataattcaaataaagacaatc-aatccatatttcatttcataatctcctaacaattcataaaaacttcacagttcacagtcattat 19928407  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  19928406 ctttaataggtcacattagtacctaaagttcct 19928374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 238
Target Start/End: Complemental strand, 22461269 - 22461067
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||| ||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||    
T  22461269 catgcaacatagtttaataacaattgcagcataatcaaatcacgtcaagcttaa-taacaaatcattctcaacaattcttgatcaatcaacaataattca 22461171  T
Q  135 agtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcac 233  Q
    ||||| ||||||| |||||||| |||| ||||| ||| ||||| |  |||||||  | |||||| || |||||| |||| | ||||||||  | ||||||    
T  22461170 agtaagggcaatc-aatccataattcacttcataatcacttaatatatcataaaggcttcacagttctcagtcaatatctccaataggtctcactagcac 22461072  T
Q  234 ctaag 238  Q
    |||||    
T  22461071 ctaag 22461067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 41666953 - 41667044
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41666953 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctcaa 41667044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 27263276 - 27263392
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |  |||    
T  27263276 catcatcaacttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcattctcaatagtttc 27263374  T
Q  114 ttgatcaattaacaataa 131  Q
    ||||||| | ||||||||    
T  27263375 ttgatcattcaacaataa 27263392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 23187079 - 23187309
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||| ||||| ||| ||||||| ||||||||||||||||||| ||| || |||||||| ||||||||||||| |  |||    
T  23187079 catcatcaacttattcatactcatggaacttggtttaataacaattgcagcataatcaaatcatatc-aggttaaataaaaaatcattctcaatagtttc 23187177  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||  ||||  |||||| | |||| ||||| ||| |||||||  |||||||| | |||||| |||||||||||||    
T  23187178 ttgatcattcaacaataattcaagtaaatacaat-taatccacaattcacttcataatcacttaacaaatcataaaagcttcacagttcacagtcattat 23187276  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||  ||||| ||||||| |||||    
T  23187277 ctttaataggtctcattagtacctaagattcct 23187309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 23598342 - 23598572
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||| ||||| ||| ||||||| ||||||||||||||||||| ||| || |||||||| ||||||||||||| |  |||    
T  23598342 catcatcaacttattcatactcatggaacttggtttaataacaattgcagcataatcaaatcatatc-aggttaaataaaaaatcattctcaatagtttc 23598440  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||  ||||  |||||| | |||| ||||| ||| |||||||  |||||||| | |||||| |||||||||||||    
T  23598441 ttgatcattcaacaataattcaagtaaatacaat-taatccacaattcacttcataatcacttaacaaatcataaaagcttcacagttcacagtcattat 23598539  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||  ||||| ||||||| |||||    
T  23598540 ctttaataggtctcattagtacctaagattcct 23598572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 31344881 - 31344967
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||| |||||    
T  31344881 catcatcaacttattcatactcatgcaacttagttaaataataattgcagcataatcaaatcacatcaagctt-aataacaattcatt 31344967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 60820 - 60936
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    ||||| || ||||| ||||  |||||||||||||| ||||||| ||||||||||||| ||||||||| || |||||||||||||||||||||| |  |||    
T  60820 catcaacaacttattcatattcatgcaacttagtttaataacaattgcagcataatc-aatcacatc-aggttaaataacaaatcattctcaatagtttc 60917  T
Q  114 ttgatcaattaacaataat 132  Q
    ||||||| | |||||||||    
T  60918 ttgatcattcaacaataat 60936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 26125212 - 26125298
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  ||||||||||||||||||||||     |||||||||||||||||| || |||||||||||||||||||||||    
T  26125212 catcatcaacttattcataatcatgcaacttagttaaataaca-----agcataatcaaatcacat-aaacttaaataacaaatcattctcaa 26125298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 41531086 - 41530977
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| ||||| ||||||  ||||||||| | || ||||| |||    
T  41531086 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt-tcaaca--tcttgatcattcaataataattca 41530991  T
Q  135 agtaaggcaatcaa 148  Q
    ||||| ||||||||    
T  41530990 agtaatgcaatcaa 41530977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 22812001 - 22811958
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  22812001 catgcaacttagttaaataacaatagcagcataatcaaatcaca 22811958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 30345073 - 30345008
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  30345073 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 30345008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 10101727 - 10101612
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||||||||| | |||||||||||| |||| ||||  ||||| |||| ||| ||||| ||||||| ||| |||||| | || |||||     
T  10101727 catgcaacttagttaaataacaatagcagcataatcagatcatatcaacagctt-aatatcaattcattttcaacaacttcctgatcattcaataataat 10101629  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  10101628 tcaagtaatgcaatcaa 10101612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 24735427 - 24735474
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||| ||||| | |||||||||||| ||||||||||    
T  24735427 catgcaacttagttaattaacaatagcagcataatcagatcacatcaa 24735474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 1283413 - 1283478
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||| | || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  1283413 catgcaacttagattaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 1283478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 27379515 - 27379479
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatca 72  Q
    |||||||||||||||||||||| | ||||||||||||    
T  27379515 catgcaacttagttaaataacaatagcagcataatca 27379479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 27383561 - 27383525
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatca 72  Q
    |||||||||||||||||||||| | ||||||||||||    
T  27383561 catgcaacttagttaaataacaatagcagcataatca 27383525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 139715 - 139944
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  139715 catcatcagtttattcataaacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagctt-aacaacaaatcattctcaacaattct 139813  T
Q  115 tgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    |||||||| | |||||| || ||| ||||||||| | ||||||||||||||||| ||| ||||||| ||||||||  | |||||| || |||||||||||    
T  139814 tgatcaataatcaataattcgagtaaaggcaatc-actccatatttcatttcataatctcttaacaattcataaagccttcacagttctcagtcattatc 139912  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
     ||||||||||  | |||||||||| ||||||    
T  139913 tctaataggtctcactagcacctaaagttcct 139944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 71072 - 71130
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaa 73  Q
    |||||||| | ||| ||||  |||||||||||||||||||||| |||||||||||||||    
T  71072 catcatcaacatattcatactcatgcaacttagttaaataacaattgcagcataatcaa 71130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 6e-58; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 15 - 237
Target Start/End: Complemental strand, 22592905 - 22592683
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | || || |||||||||||||||||||||| |||    
T  22592905 catcatcagcttattcatagacatgcaacttagttaaataacatttgtagcataatcaaatcacaac-aggtttaataacaaatcattctcaacaatttc 22592807  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||||||||| ||| ||||||||||||||||| | |||||| ||||||| |||||    
T  22592806 ttgatcattcaacaataattcaagtaaaggcaatc-aatccatatttcatttcataatctcttaacagttcataaaa-cttcacagttcacagttattat 22592709  T
Q  212 ccctaataggtcatattagcacctaa 237  Q
    |  |||||||||| ||||| ||||||    
T  22592708 ctttaataggtcacattagtacctaa 22592683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 9482395 - 9482165
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||||||||||| |||    
T  9482395 catcatcagcttattcatacacatgcaacttagttaaataacatttgcagcataagcaaatcacatc-aggtttaataacaaatcattctcaacaatttc 9482297  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| |||| ||| |||||||||| ||| ||||||| ||||||||| | |||||| | |||||||||||    
T  9482296 ttgatcattcaacaataattcaagtaaaggcaatc-aatctataattcatttcataatctcttaacaattcataaaaacttcacagtttacagtcattat 9482198  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||| ||| ||||| |||||| ||||||    
T  9482197 ctttaatagttcacattagtacctaaagttcct 9482165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 12496312 - 12496521
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| | || ||  ||||||||||||||||||||| |||    
T  12496312 catcatcagcttattcatagacatgcaacttagttaaataacatttgcagcataatcagatcacaac-aggttctataacaaatcattctcaacaatttc 12496410  T
Q  114 ttgatcaattaacaata-atcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||  |||||| ||||||||| ||||||||||||| ||||| ||| ||||||||||| ||||| | |||||| |||||||||||||    
T  12496411 ttgatcattcaacaatatttcaagtaaaggcaatc-aatccatatttcagttcataatctcttaacagttcctaaaagcttcacagttcacagtcattat 12496509  T
Q  212 ccctaataggtc 223  Q
    |  |||||||||    
T  12496510 ctttaataggtc 12496521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 238
Target Start/End: Original strand, 19662795 - 19662997
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||| ||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||    
T  19662795 catgcaacatagtttaataacaattgcagcataatcaaatcacgtcaagcttaa-taacaaatcattctcaacaattcttgatcaatcaacaataattca 19662893  T
Q  135 agtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcac 233  Q
    ||||| ||||||| |||||||| |||| ||||| ||| ||||| |  |||||||  | |||||| || |||||| |||| | ||||||||  | ||||||    
T  19662894 agtaagggcaatc-aatccataattcacttcataatcacttaatatatcataaaggcttcacagttctcagtcaatatctccaataggtctcactagcac 19662992  T
Q  234 ctaag 238  Q
    |||||    
T  19662993 ctaag 19662997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 36 - 236
Target Start/End: Complemental strand, 2685399 - 2685199
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||| ||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||  ||||||| |||    
T  2685399 catgcaacatagtttaataacaattgcagcataatcaaatcacgtcaagctt-aataacaaatcattctcaacaattcttgatcaatcgacaataattca 2685301  T
Q  135 agtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcac 233  Q
    ||||| ||||||| |||||||| |||| ||||| ||| ||||| |  |||||||  | |||||| || |||||| |||| ||||||||||  | ||||||    
T  2685300 agtaagggcaatc-aatccataattcacttcataatcacttaatatatcataaaggcttcacagttctcagtcaatatctctaataggtctcactagcac 2685202  T
Q  234 cta 236  Q
    |||    
T  2685201 cta 2685199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 5616917 - 5616686
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| ||| |||    
T  5616917 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-tttaataacaaatcattctcagcaacttc 5616819  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcat-aaaatcctcacagatcacagtcatta 210  Q
    ||||||| | |||||||| |||||| ||  ||||| |||||||| |||| ||||| ||| ||||||| ||||| |||||| ||| || || |||||  ||    
T  5616818 ttgatcattcaacaataattcaagtaaatacaatc-aatccataattcacttcataatcacttaacaattcataaaaatcttcaaagttctcagtccata 5616720  T
Q  211 tccctaataggtcatattagcacctaaggttcct 244  Q
    ||  || |||||| |||| |||||||| ||||||    
T  5616719 tctttagtaggtcttatttgcacctaaagttcct 5616686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 237
Target Start/End: Original strand, 12706714 - 12706916
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-tc 133  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||| ||| |||||||||| | || ||||| ||    
T  12706714 catgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcattttcagcaatttcttgatcattcaaaaataattc 12706812  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| || |||||| |||||||| ||||||| ||  || ||||||| ||||||||| | |||||| || |||||| ||||  |||||||||  ||||| |    
T  12706813 aagtaaatgcaatc-aatccataattcattttatattcacttaacatttcataaaagcttcacagttctcagtcaatatctttaataggtctcattagta 12706911  T
Q  233 cctaa 237  Q
    |||||    
T  12706912 cctaa 12706916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 1587833 - 1587716
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |  |||    
T  1587833 catcatcaacttattcatattcatgcaacttagtttaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcattctcaatagtttc 1587735  T
Q  114 ttgatcaattaacaataat 132  Q
    ||||||| | |||||||||    
T  1587734 ttgatcattcaacaataat 1587716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 1644293 - 1644380
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctc 105  Q
    |||||| ||||| ||||  | |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  1644293 tcatcaacttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctc 1644380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 31478331 - 31478244
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctc 105  Q
    |||||| ||||| ||||  | |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  31478331 tcatcaacttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctc 31478244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 16741230 - 16741419
Alignment:
Q  35 acatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-t 132  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| |||||||| ||| | ||||||| |||||||||| | || ||||| |    
T  16741230 acatgcaacttagtttaataacaattgtagcataatcaaatcacatcaagctt-aataacaattcactgtcaacaatttcttgatcattcaataataatt 16741328  T
Q  133 caagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtc 223  Q
    ||||| || |||||| |||||||| |||| || || ||| ||||||| ||||||||| | |||||  || |||||| ||||  |||||||||    
T  16741329 caagtaaatgcaatc-aatccataattcactttataatcacttaacatttcataaaagcttcacaattctcagtcaatatctttaataggtc 16741419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 23414649 - 23414735
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  23414649 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 23414735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 27556407 - 27556493
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  27556407 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 27556493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 20803656 - 20803539
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||||| ||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |  |||    
T  20803656 catcatcaacttattcatattcatgcagcttagtttaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcattctcaatagtttc 20803558  T
Q  114 ttgatcaattaacaataat 132  Q
    ||||||| | |||||||||    
T  20803557 ttgatcattcaacaataat 20803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 21702291 - 21702382
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  ||||||||||| |||||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  21702291 catcatcaacttattcataatcatgcaacttaattaaataacaattgcagcaaaatcaaatcacatcaag-ttaaataacaaatcatactcaa 21702382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 25135774 - 25135648
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  ||||||||| | |||||||||||||||||||| |||||||||||||||| |||| |||| ||||| |||||| |  |||    
T  25135774 catcatcaacttattcataatcatgcaactcaattaaataacatttgcagcattatcaaatcacatcaag-ttaagtaacgaatcactctcaataggttc 25135676  T
Q  114 ttgatcaattaacaataa-tcaagtaag 140  Q
    ||||||| ||||||| || |||||||||    
T  25135675 ttgatcatttaacaacaattcaagtaag 25135648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 16624137 - 16624221
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||| ||||| ||||  | |||||||||||||||||||| ||||||||||||||| ||| ||||| ||| |||||||| |||||    
T  16624137 tcatcaacttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatcaaactt-aataacaattcatt 16624221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 22430112 - 22429997
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||| ||||  | |||||||||||| |||||||||  ||||| |||| ||| ||||| ||||||| |||||||||| |||| |||||     
T  22430112 catgcaacttagttaattaactatagcagcataatcagatcacatcaacagctt-aatatcaattcattttcaacaatttcttgatcatttaataataat 22430014  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  22430013 tcaagtaatgcaatcaa 22429997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 27416289 - 27416231
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaa 73  Q
    |||||||| | ||| ||||  |||||||||||||||||||||| |||||||||||||||    
T  27416289 catcatcaacatattcatactcatgcaacttagttaaataacaattgcagcataatcaa 27416231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 31477892 - 31477827
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  31477892 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 31477827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 17804221 - 17804336
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||| ||||| | |||||||||||| |||||||||  ||||| |||| ||| ||||  ||||||| |||||||||| | || |||||     
T  17804221 catgcaacttagttaattaacaatagcagcataatcagatcacatcaacagctt-aatatcaattcatcttcaacaacttcttgatcattcaataataat 17804319  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  17804320 tcaagtaatgcaatcaa 17804336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 22949132 - 22949185
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||||||||||| || |||| ||||||||||||||| ||| |||||||||||    
T  22949132 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagcttaa 22949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 22953088 - 22953141
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||||||||||| || |||| ||||||||||||||| ||| |||||||||||    
T  22953088 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagcttaa 22953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 23871576 - 23871629
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||||||||||| || |||| ||||||||||||||| ||| |||||||||||    
T  23871576 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagcttaa 23871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 23875532 - 23875585
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||||||||||| || |||| ||||||||||||||| ||| |||||||||||    
T  23875532 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagcttaa 23875585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 16760321 - 16760384
Alignment:
Q  38 tgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  16760321 tgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 16760384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 16523473 - 16523430
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  16523473 catgcaacttagttaaataacaatagcagcataatcagatcaca 16523430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 27325700 - 27325653
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||| ||||| | |||||||||||| ||||||||||    
T  27325700 catgcaacttagttaattaacaatagcagcataatcatatcacatcaa 27325653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 1644729 - 1644844
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||| ||||||| | |||||||||||| |||| ||||  ||||| |||| ||| ||||| ||||||| ||| |||||| | || |||||     
T  1644729 catgcaacttagtttaataacaatggcagcataatcagatcatatcaacagctt-aatatcaattcattttcaacaacttcctgatcattcaataataat 1644827  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  1644828 tcaagtaatgcaatcaa 1644844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 25767250 - 25767135
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||| ||||| | |||||||||||| |||||| ||  ||||| |||| ||| ||||  ||||||| |||||||||| | || |||||     
T  25767250 catgcaacttagttaagtaacaatagcagcataatcagatcacaccaacagctt-aatatcaattcatcttcaacaacttcttgatcattcaataataat 25767152  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  25767151 tcaagtaatgcaatcaa 25767135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 63858 - 64087
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-c 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || | |||| |||||| ||||||||||||||| |    
T  63858 catcatcagcttattcata-acatgcaacttagttaaataacatttgcagcataatcaaatcacaacaggtttaa-taacaattcattctcaacaatttc 63955  T
Q  114 ttgatcaattaacaataat-caagtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | ||||||||| ||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||| | |||||| ||| |||||||||    
T  63956 ttgatcattcaacaataattcaagtaaaggcaatcaa-tccatatttcatttcataatctcttaacagttcataaaaacttcacagttcatagtcattat 64054  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  64055 ctttaataggtcacattagtacctaaagttcct 64087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 230
Target Start/End: Original strand, 75742 - 75957
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-c 113  Q
    |||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||| || | |||| |||||| ||||||||||||||| |    
T  75742 catcatcagcttattcata-acatgcaacttagttaaataacattttcagcataatcaaatcacaacaggtttaa-taacaattcattctcaacaatttc 75839  T
Q  114 ttgatcaattaacaataat-caagtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    |||| || | ||||||||| ||||||| ||||||| | ||||||||||||||||| ||| ||||||||||||||||| | |||||| |||||||||||||    
T  75840 ttgaccattcaacaataattcaagtaaaggcaatcta-tccatatttcatttcataatctcttaacagttcataaaaacttcacagttcacagtcattat 75938  T
Q  212 ccctaataggtcatattag 230  Q
    |  ||||| |||| |||||    
T  75939 ctttaatatgtcacattag 75957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 15 - 242
Target Start/End: Original strand, 46975471 - 46975699
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||||||| |||    
T  46975471 catcatcagcttattcatagacgtgcaacttagttaaataacatttgcagcataatcaaatcacaac-aggtttaataacaaatcattctcaacaatttc 46975569  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||| ||||| ||||||||||||||||||| ||| |||||||| |||||||| | ||| || |||||||||||||    
T  46975570 ttgatcattcaacaataattcaagtaaagacaatc-aatccatatttcatttcataatctcttaacaggtcataaaaacttcatagttcacagtcattat 46975668  T
Q  212 ccctaataggtcatattagcacctaaggttc 242  Q
    |  |||||||||| ||||| |||||| ||||    
T  46975669 ctttaataggtcacattagtacctaaagttc 46975699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 18882371 - 18882601
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||| | |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |||    
T  18882371 catcatcagcttattcataaaaatgcaacttagttaaataacattttcagcataatcaaatcacatcaagctt-aataacaaatcattatcaacaatttc 18882469  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||  | |||||||||| |||||| ||| ||||||| ||||||||  | |||||  || |||| | |||    
T  18882470 ttgatcattcaacaataattcaagtaaaggcaat-tattccatatttcttttcataatctcttaacaattcataaaggcttcacaattctcagttaatat 18882568  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    | ||||||||||  | |||||||||| ||||||    
T  18882569 ctctaataggtctcactagcacctaaagttcct 18882601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 20138108 - 20138317
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-cttgatcaattaacaataat-c 133  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||| || | ||||||||| |    
T  20138108 catgcaacttagttaaataacaattgcagcataatcaaatcacatcaggtttaa-taacaaatcattctcaacaatttcttgaacattcaacaataattc 20138206  T
Q  134 aagtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    ||| || ||||| ||| ||||||||||||||||  ||| ||||||||||||||||| | |||||| ||||||| ||||||  |||||||||  ||||| |    
T  20138207 aagcaaaggcaaccaa-tccatatttcatttcaaaatctcttaacagttcataaaaacttcacagttcacagttattatctttaataggtctcattagta 20138305  T
Q  233 cctaaggttcct 244  Q
    ||||| ||||||    
T  20138306 cctaaagttcct 20138317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 36 - 238
Target Start/End: Original strand, 12646896 - 12647098
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattcttgatcaattaacaataa-tca 134  Q
    |||||||| ||||| ||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||    
T  12646896 catgcaacatagtttaataacaattgcagcataatcaaatcacgtcaagcttaa-taacaaatcattctcaacaattcttgatcaatcaacaataattca 12646994  T
Q  135 agtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagcac 233  Q
    ||||| ||||||| |||||||| |||| ||||| ||| ||||| |  |||||||  | |||||| || |||||| |||| | ||||||||  | ||||||    
T  12646995 agtaagggcaatc-aatccataattcacttcataatcacttaatatatcataaaggcttcacagttctcagtcaatatctccaataggtctcactagcac 12647093  T
Q  234 ctaag 238  Q
    |||||    
T  12647094 ctaag 12647098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 19211892 - 19212101
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-tc 133  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||| |||||||||| | |||||||| ||    
T  19211892 catgcaacttagttaaataacaattgcagcataatcaaatcacgtcaagctt-aataacaattcattctcaacaatttcttgatcattcaacaataattc 19211990  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| ||  ||||| |||||||| |||| || || ||| ||||||| ||||||||| | |||||| || |||||| ||||  | |||||||  ||||| |    
T  19211991 aagtaaatacaatc-aatccataattcactttataatcacttaacatttcataaaagcttcacagttctcagtcaatatcttttataggtctcattagta 19212089  T
Q  233 cctaaggttcct 244  Q
    ||||| ||||||    
T  19212090 cctaaagttcct 19212101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 33797286 - 33797372
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  33797286 catcatcaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 33797372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 23819380 - 23819171
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-tc 133  Q
    |||||||||| ||| ||||||| ||||||||||||||| ||| ||||||||| |||||||| ||||| ||| ||| |||||||||| | || ||||| ||    
T  23819380 catgcaacttcgtttaataacaattgcagcataatcaattcatatcaagctt-aataacaattcattttcagcaatttcttgatcattcaataataattc 23819282  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| ||| ||||| ||||||||  ||| || ||  || |||||||  |||||||| | |||||| || |||||| ||||  |||||||||  |||||||    
T  23819281 aagtaaagacaatc-aatccataaatcactttatattcacttaacatctcataaaagcttcacagttctcagtcaatatctttaataggtctcattagca 23819183  T
Q  233 cctaaggttcct 244  Q
    ||||||||||||    
T  23819182 cctaaggttcct 23819171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 20229330 - 20229241
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||| ||||| ||||  | |||||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  20229330 tcatcaacttattcatactcttgcaacttagttaaataacaattccagcataatcaaatcacattaag-ttaaataacaaatcattctcaa 20229241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 39244242 - 39244170
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||| ||||| ||||  | |||||||||||||||||||| ||||||||||||||| ||| ||||| |||||    
T  39244242 tcatcaacttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatcaaacttaa 39244170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 39247797 - 39247725
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||| ||||| ||||  | |||||||||||||||||||| ||||||||||||||| ||| ||||| |||||    
T  39247797 tcatcaacttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcatatcaaacttaa 39247725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 41388342 - 41388270
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaa 89  Q
    |||||| ||||| ||||  | |||||||||||||||||||| ||||||||||||||| ||  |||||||||||    
T  41388342 tcatcaacttattcatattcttgcaacttagttaaataacaattgcagcataatcaattcgtatcaagcttaa 41388270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 1925211 - 1925146
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  1925211 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 1925146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 20924225 - 20924160
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  20924225 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 20924160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 24783182 - 24783070
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||||||||| | |||||||||||| ||||||| |  ||||| |||| ||| ||||| ||||||| |||||||||| | || |||||     
T  24783182 catgcaacttagttaaataacaatagcagcataatcagatcacatgaacagctt-aatatcaattcattttcaacaacttcttgatcattcaataataat 24783084  T
Q  132 tcaagtaaggcaat 145  Q
    |||||||| |||||    
T  24783083 tcaagtaatgcaat 24783070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 1010747 - 1010794
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| |||| |||||    
T  1010747 catgcaacttagttaaataacaatagcagcataatcagatcatatcaa 1010794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 3473012 - 3472969
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  3473012 catgcaacttagttaaataacaatagcagcataatcagatcaca 3472969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 18182210 - 18182167
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  18182210 catgcaacttagttaaataacaatagcagcataatcagatcaca 18182167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 36819412 - 36819345
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatca 82  Q
    |||||||| ||||| || |  |||||||||||||||| ||||| | |||||||||||| |||||||||    
T  36819412 catcatcaacttattcagactcatgcaacttagttaattaacaatagcagcataatcagatcacatca 36819345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 20228891 - 20228776
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||| ||||||| | |||||||||||| |||| ||||  ||||| |||| ||| ||||| ||||||| ||| |||||| | || |||||     
T  20228891 catgcaacttagtttaataacaatggcagcataatcagatcatatcaacagctt-aatatcaattcattttcaacaacttcctgatcattcaataataat 20228793  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  20228792 tcaagtaatgcaatcaa 20228776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 22449355 - 22449307
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaag 84  Q
    |||||||||||||||||||| | | |||||||||||| |||||| ||||    
T  22449355 catgcaacttagttaaataatagtagcagcataatcagatcacaacaag 22449307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 36310 - 36539
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattct 114  Q
    ||||||||| |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  36310 catcatcagtttattcataaacatgcaacttaattaaataacatttgcagcataatcaaatcacatcaagctt-aataacaaatcattcttaacaattct 36408  T
Q  115 tgatcaattaacaataa-tcaagtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatc 212  Q
    |||||||||||||| || |   |||| ||||||| ||||||||||||| ||||| ||| |||||||  |||||||| | |||||| || |||||||||||    
T  36409 tgatcaattaacaacaatttgggtaatggcaatc-aatccatatttcacttcataatcacttaacaaatcataaaagcttcacagttctcagtcattatc 36507  T
Q  213 cctaataggtcatattagcacctaaggttcct 244  Q
     ||||||||||  | |||||||||| ||||||    
T  36508 tctaataggtctcactagcacctaaagttcct 36539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 18358 - 18588
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| || || |||||||||||||||||||||| |||    
T  18358 catcatcagcttattcatacacatgcaacttagttaaataacatttgcagcataaacaaatcacatc-aggtttaataacaaatcattctcaacaatttc 18456  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||||||||| | |||||| ||||||| || ||| ||||||| ||||||||| | ||| || |||||||||||||    
T  18457 ttgatcattcaacaataattcaagtaaaggcaatc-agtccataattcatttaataatctcttaacaattcataaaaacttcatagttcacagtcattat 18555  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  18556 ctttaataggtcacattagtacctaaagttcct 18588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 244
Target Start/End: Original strand, 9424 - 9654
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-c 113  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||| |||||| | || | |||| |||||||||||||||||||||| |    
T  9424 catcatcagcttattcataaacatgcaacttagttaaataacatttgcagtataattaaatcataacaggtttaa-taacaaatcattctcaacaatttc 9522  T
Q  114 ttgatcaattaacaataat-caagtaa-ggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | || |||||| ||||||| ||||||||| || |||||||||||||| ||| ||||||||||||| ||| | |||||| |||||||||||||    
T  9523 ttgatcattcaataataattcaagtaaaggcaatcaattc-atatttcatttcataatctcttaacagttcatgaaaacttcacagttcacagtcattat 9621  T
Q  212 ccctaataggtcatattagcacctaaggttcct 244  Q
    |  |||||||||| ||||| |||||| ||||||    
T  9622 ctttaataggtcacattagtacctaaagttcct 9654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 18441 - 18232
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaatt-cttgatcaattaacaataa-tc 133  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||||| | || ||||| ||    
T  18441 catgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcattttcaacaattccttgatcattcaataataattc 18343  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| ||  ||||| |||||||| |||| || ||| || |||||||  |||||||| | |||||| || |||||||||||  |||||||||  |||||||    
T  18342 aagtaaatacaatc-aatccataattcactttattttcacttaacatatcataaaagcttcacagttctcagtcattatctttaataggtctcattagca 18244  T
Q  233 cctaaggttcct 244  Q
    ||||| ||||||    
T  18243 cctaaagttcct 18232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 9338 - 9464
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |  |||    
T  9338 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctcaatagtttc 9436  T
Q  114 ttgatcaattaacaataa-tcaagtaag 140  Q
    ||||||| ||||||| || |||||||||    
T  9437 ttgatcatttaacaacaactcaagtaag 9464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 242
Target Start/End: Complemental strand, 6359 - 6131
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| |||   |||||||| ||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||| || ||| |||    
T  6359 catcatcaacttattcatgctcatgcaacatagtttaataacaattgcagcataatcaaatcacatcaag-tttaataacaaatcattcacagcaacttc 6261  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||  ||||| |||||||| |||| ||||| ||| | ||||| ||||||||| | ||| || || |||||| |||    
T  6260 ttgatcattcaacaataattcaagtaaatacaatc-aatccataattcacttcataatcacataacaattcataaaagcttcagagttctcagtcaatat 6162  T
Q  212 ccctaataggtcatattagcacctaaggttc 242  Q
    |  |||||||||| |||||||||||| ||||    
T  6161 ctttaataggtcacattagcacctaaagttc 6131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 1903 - 2029
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| |  |||    
T  1903 catcatcaacttattcataatcatgcaactcagttaaataacatttgcagcattatcaaatcacatcaag-ttaaataacaaatcactctcaatagtttc 2001  T
Q  114 ttgatcaattaacaataa-tcaagtaag 140  Q
    ||||||| ||||||| || |||||||||    
T  2002 ttgatcatttaacaacaattcaagtaag 2029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 242
Target Start/End: Original strand, 6948 - 7176
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| |||   |||||||| ||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||| || ||| |||    
T  6948 catcatcaacttattcatgctcatgcaacatagtttaataacaattgcagcataatcaaatcacatcaag-tttaataacaaatcattcacagcaacttc 7046  T
Q  114 ttgatcaattaacaataa-tcaagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattat 211  Q
    ||||||| | |||||||| |||||| ||  ||||| |||||||| |||| ||||| ||| | ||||| ||||||||| | ||| || || |||||| |||    
T  7047 ttgatcattcaacaataattcaagtaaatacaatc-aatccataattcacttcataatcacataacaattcataaaagcttcagagttctcagtcaatat 7145  T
Q  212 ccctaataggtcatattagcacctaaggttc 242  Q
    |  |||||||||| |||||||||||| ||||    
T  7146 ctttaataggtcacattagcacctaaagttc 7176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 11404 - 11278
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| |  |||    
T  11404 catcatcaacttattcataatcatgcaactcagttaaataacatttgcagcattatcaaatcacatcaag-ttaaataacaaatcactctcaatagtttc 11306  T
Q  114 ttgatcaattaacaataa-tcaagtaag 140  Q
    ||||||| ||||||| || |||||||||    
T  11305 ttgatcatttaacaacaattcaagtaag 11278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 38921 - 38795
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  ||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| |||||| |  |||    
T  38921 catcatcaacttattcataatcatgcaactcagttaaataacatttgcagcattatcaaatgacatcaag-ttaaataacaaatcactctcaatagtttc 38823  T
Q  114 ttgatcaattaacaataa-tcaagtaag 140  Q
    ||||||| ||||||| || |||||||||    
T  38822 ttgatcatttaacaacaattcaagtaag 38795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 77273 - 77182
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  77273 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctcaa 77182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 8503 - 8594
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  8503 catcatcaacttattcataatcatgcaacttagttaaataacaattgcaacataatcaaatcacatcaag-ttaaataacaaatcattctcaa 8594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 15647 - 15738
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  15647 catcatcaacttattcataatcatgcaacttagttaaataacaattgcaacataatcaaatcacatcaag-ttaaataacaaatcattctcaa 15738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 1880 - 1971
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    |||||||| ||||| ||||  |||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1880 catcatcaacttattcataatcatgcaacttagttaaatcacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctcaa 1971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 15341 - 15431
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctca 106  Q
    |||||||| ||||| ||||   ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  15341 catcatcaacttattcataattatgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctca 15431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 140
Target Start/End: Complemental strand, 6102 - 5976
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |  |||    
T  6102 catcatcaacttattcatactcatgcaacttagtttaataacaattgcagcataatcaaatcacatc-aggttaaataacaaatcattctcaatagtttc 6004  T
Q  114 ttgatcaattaacaataa-tcaagtaag 140  Q
    ||||||| | |||||||| |||||||||    
T  6003 ttgatcattcaacaataattcaagtaag 5976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 173295 - 173429
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| || |  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||    
T  173295 catcatcaacttattcagactcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcattttcaacaatttc 173393  T
Q  114 ttgatcaattaacaataa-tcaagtaaggcaatcaa 148  Q
    || |||| | || ||||| |||||||| ||||||||    
T  173394 tttatcattcaataataattcaagtaatgcaatcaa 173429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 62264 - 62381
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaaca-attc 113  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||| |  |||    
T  62264 catcatcaacttattcataatcatgcaacttagttaaataacaattgcagcataatcaaatcacatc-aggttaaataacaactcattctcaatagtttc 62362  T
Q  114 ttgatcaattaacaataat 132  Q
    ||||||| | |||||||||    
T  62363 ttgatcattcaacaataat 62381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 12907 - 13043
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-t 111  Q
    |||||||| ||||| || |  |||||||||||||||| ||||| | | |||||||||| |||||||||  ||||| |||| ||| ||||  ||||||| |    
T  12907 catcatcaacttattcagactcatgcaacttagttaattaacaataggagcataatcagatcacatcaacagctt-aatatcaattcatcttcaacaatt 13005  T
Q  112 tcttgatcaattaacaataa-tcaagtaaggcaatcaa 148  Q
    ||||||||| | || ||||| |||||||| ||||||||    
T  13006 tcttgatcattcaataataattcaagtaatgcaatcaa 13043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 19191 - 19259
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||| ||||| || |  |||||||||||||||| ||||| | | |||||||||| ||||||||||    
T  19191 catcatcaacttattcagactcatgcaacttagttaattaacaataggagcataatcagatcacatcaa 19259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 57; Significance: 6e-24; HSPs: 4)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 80300 - 80387
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctc 105  Q
    |||||| ||||| ||||  | |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  80300 tcatcaacttattcatactcttgcaacttagttaaataacaattgcagcataatcaaatcacatcaag-ttaaataacaaatcattctc 80387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 80739 - 80804
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| ||||||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  80739 catgcaacttagtttaataacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 80804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 65610 - 65495
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||||||||| | |||||||||||| |||| ||||  ||||| |||| ||| ||||| ||||||| |||||||||| | || |||||     
T  65610 catgcaacttagttaaataacaatagcagcataatcagatcatatcaacagctt-aatatcaattcattttcaacaacttcttgatcattcaataataat 65512  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  65511 tcaagtaatgcaatcaa 65495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 61694 - 61579
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||||||||| | |||||||||||| |||| ||||  ||||| |||| ||| ||||| ||||||| ||| |||||| | || |||||     
T  61694 catgcaacttagttaaataacaatagcagcataatcagatcatatcaacagctt-aatatcaattcattttcaacaacttcctgatcattcaataataat 61596  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  61595 tcaagtaatgcaatcaa 61579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 20566 - 20480
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  20566 catcatcaacttattcatattcatgcaacttagttaaataacaattgcagcataatcaaatcacatcaagctt-aataacaattcatt 20480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 3611 - 3402
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-tc 133  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||| ||||| ||||||| |||||||||| | || || || ||    
T  3611 catgcaacttagttaaataacaattgcagtataatcaaatcacatcaagctt-aataacaattcattttcaacaatttcttgatcattcaataacaattc 3513  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| || |||||| |||||||| |||| |  ||  || ||||||| ||||||||| | |||||| || |||||| ||||  |||| ||||  ||||| |    
T  3512 aagtaaatgcaatc-aatccataattcactctatattcacttaacatttcataaaagcttcacagttctcagtcaatatctttaatgggtctcattagta 3414  T
Q  233 cctaaggttcct 244  Q
    ||||| ||||||    
T  3413 cctaaagttcct 3402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 244
Target Start/End: Original strand, 23241 - 23450
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa-tc 133  Q
    |||| ||| ||||| ||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| ||| | |||||||| ||    
T  23241 catgaaacatagtttaataataattgcagcttaatcaaatcacatcaagctt-aataacaaatcattctcaacaatttcttggtcattcaacaataattc 23339  T
Q  134 aagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagca 232  Q
    |||| ||  ||||| |||||||| |||| ||||| ||| ||||||| ||||||||| | ||| || || |||||| ||||   ||||||||  ||||| |    
T  23340 aagtaaatacaatc-aatccataattcacttcataatcacttaacaattcataaaagcttcatagttctcagtcaatatcttgaataggtctcattagta 23438  T
Q  233 cctaaggttcct 244  Q
     |||||||||||    
T  23439 actaaggttcct 23450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 372 - 489
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| ||||  ||||||||||| |||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||||| || |||    
T  372 catcatcaacttattcataatcatgcaacttaattaaataacaattgcagcataatcaaatcacatc-aggttaaacaacaaatcattctcaataatttc 470  T
Q  114 ttgatcaattaacaataat 132  Q
    || |||| | |||||||||    
T  471 ttaatcattcaacaataat 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 16762 - 16674
Alignment:
Q  18 catcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaa 107  Q
    ||||| ||||| ||||  ||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  16762 catcaacttattcataatcatgcgacttagttaaataacaattgcagcataatcaaatcatatcaa-cttaaataacaaatcattctcaa 16674  T

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Target: scaffold0012 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 25050 - 24840
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaattc--ttgatcaattaacaataa-t 132  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||||||||  |||| |||| |||||  ||||||| | || ||||| |    
T  25050 catgcaactcagtttaataacaattgcagcataatcaaatcacatcaagctt-aataacaacacattttcaataattcctttgatcattcaataataatt 24952  T
Q  133 caagt-aaggcaatcaaatccatatttcatttcattatcccttaacagttcataaaatcctcacagatcacagtcattatccctaataggtcatattagc 231  Q
    ||||| || |||||| |||||||| |||| || || ||| ||||||| ||| ||||| | |||||| || |||||| ||||  |||||||||  |||||     
T  24951 caagtaaatgcaatc-aatccataattcactttataatcacttaacatttcctaaaagcttcacagttctcagtcaatatctttaataggtctcattagt 24853  T
Q  232 acctaaggttcct 244  Q
    |||||| ||||||    
T  24852 acctaaagttcct 24840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 189459 - 189394
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  189459 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 189394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 105
Target Start/End: Complemental strand, 80876 - 80789
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctc 105  Q
    |||||| ||||| ||||  | |||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  80876 tcatcaacttattcatactcttgcaacttagttaaataacaattgcagcataattaaatcacatcaag-ttaaataacaaatcattctc 80789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 228475 - 228370
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaac-aattc 113  Q
    |||||||| ||||| || |  |||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||| ||||| | |||    
T  228475 catcatcaacttattcagactcatgcaacttagttaaataacaattgcagcataatcagatcacatcaagctt-aataacaattcattttcaactatttc 228377  T
Q  114 ttgatca 120  Q
    |||||||    
T  228376 ttgatca 228370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 6684 - 6770
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||| | ||||| ||||  |||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||    
T  6684 catcatgaacttattcatactcatgcaacttagttaaataacaattgcagcataatcaaatctcatcaagctt-aataacaattcatt 6770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 20119 - 20014
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcattctcaacaa-ttc 113  Q
    |||||||| ||||| || |  |||||||||||||| ||||||| ||||| |||||||| |||||||||||||| |||||||| ||||| ||||||| |||    
T  20119 catcatcaacttattcagattcatgcaacttagtttaataacaattgcaacataatcagatcacatcaagctt-aataacaattcattttcaacaatttc 20021  T
Q  114 ttgatca 120  Q
    |||||||    
T  20020 ttgatca 20014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 30890 - 30974
Alignment:
Q  17 tcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||| ||||| ||||  |||||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||| |||||    
T  30890 tcatcaacttattcatactcatgcaacttagttaaataacaattacagcataatcaaatctcatcaagctt-aataacaattcatt 30974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 207951 - 207883
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||| ||||| ||||  |||||||||||||||||||||| |||||||||||||| |||| |||||    
T  207951 catcatcaacttattcatattcatgcaacttagttaaataacaattgcagcataatcatatcatatcaa 207883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 2775 - 2669
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-t 111  Q
    |||||||| ||||| || |  |||||||||||||||| ||||| |||||||||||||| |||||||||  ||||| |||||||| ||||| ||||||| |    
T  2775 catcatcaacttattcagactcatgcaacttagttaattaacaattgcagcataatcagatcacatcaacagctt-aataacaattcatt-tcaacaatt 2678  T
Q  112 tcttgatca 120  Q
    |||||||||    
T  2677 tcttgatca 2669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 186 - 233
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||    
T  186 catgcaacttagttaaataacaatagcagcataatcagatcacatcaa 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 2933 - 2979
Alignment:
Q  37 atgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||||    
T  2933 atgcaacttagttaaataacaatagcagcataatcagatcacatcaa 2979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 9747 - 9682
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||| ||||||| ||||| ||||||| |||||| |||||||||||||| |||||||| |||||    
T  9747 catgcaacatagttaattaacaattgcagcgtaatcagatcacatcaagctt-aataacaattcatt 9682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 11583 - 11518
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  11583 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 11518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 18735 - 18599
Alignment:
Q  15 catcatcagcttatacatagacatgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-t 111  Q
    |||||||| ||||| || |  |||||||||||| ||||||||| | |||||||||||| |||| ||||  ||||| |||||||| ||||| |||| || |    
T  18735 catcatcaacttattcagactcatgcaacttaggtaaataacaatagcagcataatcagatcatatcaacagctt-aataacaattcattttcaataatt 18637  T
Q  112 tcttgatcaattaacaataa-tcaagtaaggcaatcaa 148  Q
    ||||||||| | || ||||| |||||||| ||||||||    
T  18636 tcttgatcattcaaaaataattcaagtaatgcaatcaa 18599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 10131 - 10085
Alignment:
Q  37 atgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||||    
T  10131 atgcaacttagttaaataacaatagcagcataatcagatcacatcaa 10085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 14169 - 14104
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  14169 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 14104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 36168 - 36103
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||||||| || |||| ||||||||||||||| ||| ||||||||| |||||||| |||||    
T  36168 catgcaacttagtttaacaacaattgcagcataatcaattcatatcaagctt-aataacaattcatt 36103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 53589 - 53704
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||| ||||| | |||||||||||| |||||||||  ||||| |||| ||| ||||  ||||||| |||||||||| | || |||||     
T  53589 catgcaacttagttaattaacaatagcagcataatcagatcacatcaacagctt-aatatcaattcatcttcaacaacttcttgatcattcaataataat 53687  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  53688 tcaagtaatgcaatcaa 53704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 3957 - 3842
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||||||||| | |||||||||||| |||| ||||  ||||| |||| ||| ||||| ||||||| ||| |||||| | || |||||     
T  3957 catgcaacttagttaaataacaatagcagcataatcagatcatatcaacagctt-aatatcaattcattttcaacaacttcctgatcattcaataataat 3859  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  3858 tcaagtaatgcaatcaa 3842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 66497 - 66382
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatca--agcttaaataacaaatcattctcaacaa-ttcttgatcaattaacaataa- 131  Q
    |||||||||||||||| ||||| | |||||||||||| |||||||||  ||||| |||| ||| ||||  ||||||| |||||||||| | || |||||     
T  66497 catgcaacttagttaattaacaatagcagcataatcagatcacatcaacagctt-aatatcaattcatcttcaacaacttcttgatcattcaataataat 66399  T
Q  132 tcaagtaaggcaatcaa 148  Q
    |||||||| ||||||||    
T  66398 tcaagtaatgcaatcaa 66382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 420 - 463
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  420 catgcaacttagttaaataacaatagcagcataatcagatcaca 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 6398 - 6355
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  6398 catgcaacttagttaaataacaatagcagcataatcagatcaca 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 474 - 540
Alignment:
Q  36 catgcaactt-agttaaataacatttgcagcataatcaaatcacatcaagcttaaataacaaatcatt 102  Q
    |||||||||| |||||||||||| | ||||||||||||| ||| ||||||||| |||||||| |||||    
T  474 catgcaactttagttaaataacaatagcagcataatcaattcatatcaagctt-aataacaattcatt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 4457 - 4500
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  4457 catgcaacttagttaaataacaatggcagcataatcagatcaca 4500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 2174 - 2131
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  2174 catgcaacttagttaaataacaatagcagcataatcagatcaca 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 5613 - 5656
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  5613 catgcaacttagttaaataacagtagcagcataatcagatcaca 5656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 6808 - 6851
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  6808 catgcaacttagttaaataacagtagcagcataatcagatcaca 6851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 2195 - 2238
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  2195 catgcaacttagttaaataacagcagcagcataatcaaatcaca 2238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 1521 - 1564
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  1521 catgcaacttagttaaataacaatagcagcataatcagatcaca 1564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 17201 - 17154
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcacatcaa 83  Q
    |||| ||||||||||||||||| | |||||||||||| ||||||||||    
T  17201 catggaacttagttaaataacaatagcagcataatcagatcacatcaa 17154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 42654 - 42697
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  42654 catgcaacttagttaaataacaatagcagcataatcagatcaca 42697  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 73856 - 73813
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatcaaatcaca 79  Q
    |||||||||||||||||||||| | |||||||||||| ||||||    
T  73856 catgcaacttagttaaataacaatagcagcataatcagatcaca 73813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 5183 - 5147
Alignment:
Q  36 catgcaacttagttaaataacatttgcagcataatca 72  Q
    |||||||||||||||||||||| | ||||||||||||    
T  5183 catgcaacttagttaaataacaatagcagcataatca 5147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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