View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0080_low_2 (Length: 542)
Name: NF0080_low_2
Description: NF0080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0080_low_2 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 406; Significance: 0; HSPs: 27)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 30 - 528
Target Start/End: Complemental strand, 15964552 - 15964051
Alignment:
| Q |
30 |
actctgatggctatgatcttgaaggagatttaagcaatggagatgacttaaaagtgtttacctattcatcaataattgtggcaaccaatggcttttcatc |
129 |
Q |
| |
|
|||||||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15964552 |
actctgatggtgatgatctagaaggagatttgagcaacggagatgacttaaaagtgtttacctattcatcaataattgtggcaaccaatggcttttcatc |
15964453 |
T |
|
| Q |
130 |
agaaaacaagttaggacaaggtggctttggacctgttttcaaggtgaccctttttt-atagtttttctgagatgaaacagttgcgattattcagtcatcg |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
15964452 |
agaaaacaagttaggacaaggtggctttggacctgttttcaaggtgaccctttttttatagtttttctgagatgaaacagttgcgattattgagtcatcg |
15964353 |
T |
|
| Q |
229 |
gttttttaata-gcttttatattcaacacagggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacg |
327 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15964352 |
gttttttaatatgcttttaaattcaacacagggaattctaccttcggagcaagaggtagctgtgaagaaactttcaaaaacatctggacaaggaatgact |
15964253 |
T |
|
| Q |
328 |
gagtttagaaatgaattaacactcatttgtaagcttcagcatacaaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatct |
427 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
15964252 |
gagtttagaaatgaattaacactcatttgtaagcttcagcatacaaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttgatct |
15964153 |
T |
|
| Q |
428 |
acgagtatatgcccaacaaaagtttggacttctttttatttggtaagatatattaatttctacaatttcttaaggttgtgta-tgaatatttgtgtgacc |
526 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
15964152 |
atgagtatatgcccaacaaaagtttggacttctttttatttggtgagatatattgattgctacaatttcttaaggttgtgtattgaatatttgggtgacc |
15964053 |
T |
|
| Q |
527 |
tt |
528 |
Q |
| |
|
|| |
|
|
| T |
15964052 |
tt |
15964051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 44 - 485
Target Start/End: Complemental strand, 19149986 - 19149535
Alignment:
| Q |
44 |
gatcttgaaggagatttaagcaatggagatgacttaaaagtgtttacctattcatcaataattgtggcaaccaatggcttttcatcagaaaacaagttag |
143 |
Q |
| |
|
||||| ||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||| |
|
|
| T |
19149986 |
gatctagaaggagatttaagcaacggtgatgacttaaaagtgtttagctattcatcaataattgtggctaccaatggcttttcttctgaaaacaagttag |
19149887 |
T |
|
| Q |
144 |
gacaaggtggctttggacctgttttcaaggtgacccttttttatagtttttctgagatg----------aaacagttgcgattattcagtcatcggtttt |
233 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||| |||||| || ||||| |||| |
|
|
| T |
19149886 |
gacaaggtggctttggacctgttttcaaggtgaccctttttta--gttttgctgagatggtggctcctgaaatagtttagattatgcattcatccatttt |
19149789 |
T |
|
| Q |
234 |
-ttaat-agcttttatattcaacacagggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagt |
331 |
Q |
| |
|
||||| | ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19149788 |
attaatgatattttatatttaattcagggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagt |
19149689 |
T |
|
| Q |
332 |
ttagaaatgaattaacactcatttgtaagcttcagcatacaaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacga |
431 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | || || ||||| || |
|
|
| T |
19149688 |
ttagaaatgaattaacactcatttgtaagcttcagcatacaaatcttgttcaactaatcggtcattgcattcatgaacaagagcggatattgatctatga |
19149589 |
T |
|
| Q |
432 |
gtatatgcccaacaaaagtttggacttctttttatttggtaagatatattaatt |
485 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
19149588 |
gtatatgcccaacaaaagcttggacttctttttatttggtgagatatattaatt |
19149535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 44 - 484
Target Start/End: Complemental strand, 15983026 - 15982575
Alignment:
| Q |
44 |
gatcttgaaggagatttaagcaatggagatgacttaaaagtgtttacctattcatcaataattgtggcaaccaatggcttttcatcagaaaacaagttag |
143 |
Q |
| |
|
||||| ||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||||| || |||| ||||||||| || ||||||||||||| |
|
|
| T |
15983026 |
gatctagaaggagatttgagcaacggcgatgacttaaaagtgtttagctattcatcaataattgttgctaccagtggcttttcttctgaaaacaagttag |
15982927 |
T |
|
| Q |
144 |
gacaaggtggctttggacctgttttcaaggtgacccttttttatagtttttctgagatg----------aaacagttgcgattattcagtcatcggtttt |
233 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||| |||||| || | ||| |||| |
|
|
| T |
15982926 |
gacaaggtggctttggacctgttttcaaggtgaccctttttta--gttttgctgagatggtggcttctgaaatagtttagattatgcatttatccatttt |
15982829 |
T |
|
| Q |
234 |
-ttaat--agcttttatattcaacacagggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggag |
330 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
15982828 |
attaatgaagtttttatattcaattcagggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgaccgag |
15982729 |
T |
|
| Q |
331 |
tttagaaatgaattaacactcatttgtaagcttcagcatacaaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacg |
430 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| | || || ||||| | |
|
|
| T |
15982728 |
tttagaaatgaattaactctcatttgtaagcttcagcataccaatcttgttcaactaatcggtcattgcattcatgaacaagagcgtatattgatctatg |
15982629 |
T |
|
| Q |
431 |
agtatatgcccaacaaaagtttggacttctttttatttggtaagatatattaat |
484 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
15982628 |
agtatatgcctaacaaaagcttggacttctttttatttggtgagatatattaat |
15982575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 242 - 504
Target Start/End: Original strand, 16005865 - 16006127
Alignment:
| Q |
242 |
ttttatattcaacacagggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatga |
341 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16005865 |
ttttatattcaattcagggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgactgagtttagaaatga |
16005964 |
T |
|
| Q |
342 |
attaacactcatttgtaagcttcagcatacaaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgccc |
441 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| | || || ||||| |||||||||||| |
|
|
| T |
16005965 |
attaacactcattagtaagcttcagcatacgaatcttgttcggctaatcggacattgcattcatgaacatgagcgtatattgatctatgagtatatgccc |
16006064 |
T |
|
| Q |
442 |
aacaaaagtttggacttctttttatttggtaagatatattaatttctacaatttcttaaggtt |
504 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||||| ||||| | |||||||||| |
|
|
| T |
16006065 |
aacaaaagcttggacttctttttatttggtgagatatattaattgctacagtctcttaaggtt |
16006127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 240 - 506
Target Start/End: Original strand, 19186676 - 19186942
Alignment:
| Q |
240 |
gcttttatattcaacacagggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaat |
339 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
19186676 |
gcttttatattcaattcagggaattctaccttcggggcaagaagtagctgtgaagaaactttcaaaaacatctggacaaggaatgattgagtttagaaat |
19186775 |
T |
|
| Q |
340 |
gaattaacactcatttgtaagcttcagcatacaaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgc |
439 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
19186776 |
gaattaacactcatttgtaagcttcagcatacaaatcttgttcaactaatcggtcattgcattcatgaacgagagagaatgttgatctatgagtatatgc |
19186875 |
T |
|
| Q |
440 |
ccaacaaaagtttggacttctttttatttggtaagatatattaatttctacaatttcttaaggttgt |
506 |
Q |
| |
|
| |||| ||| ||||||||||||||||||||| || |||||| ||| |||||| |||||||||||| |
|
|
| T |
19186876 |
caaacagaagcttggacttctttttatttggtgaggtatattgattgatacaatctcttaaggttgt |
19186942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 242 - 522
Target Start/End: Original strand, 15954341 - 15954622
Alignment:
| Q |
242 |
ttttatattcaacacagggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatga |
341 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || |||| |||||| |
|
|
| T |
15954341 |
ttttatattcaattcagggaattctaccttcagggcaagaagtagctgtgaagaaactttcacaaacttctggacaaggaattattgaatttaaaaatga |
15954440 |
T |
|
| Q |
342 |
attaacactcatttgtaagcttcagcatacaaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgccc |
441 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| | || || ||||| |||||||||||| |
|
|
| T |
15954441 |
attaacactcatttgtaagcttcagcatacaaatcttgttcggctaatcggacattgcattcatgaacaagagcggatattgatctatgagtatatgccc |
15954540 |
T |
|
| Q |
442 |
aacaaaagtttggacttctttttatttggtaagatatattaatttctacaatttcttaaggttgtgtat-gaatatttgtgt |
522 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||| |||||| | ||||| |||||||||||| ||| |||||||||||| |
|
|
| T |
15954541 |
aacaaaagcttggacttctttttatttggtgagatatgttaattgcgacaatctcttaaggttgtttatggaatatttgtgt |
15954622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 257 - 471
Target Start/End: Original strand, 15942793 - 15943007
Alignment:
| Q |
257 |
agggaattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttg |
356 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| | |||||||||| |||||||||||||||| || |||| ||||||||||| ||||| || |
|
|
| T |
15942793 |
agggaattctaccttctgggcaagaagtagctgtgaaaagactttcaaaatcttctggacaaggaattgttgaatttaaaaatgaattaaatctcatatg |
15942892 |
T |
|
| Q |
357 |
taagcttcagcatacaaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggac |
456 |
Q |
| |
|
|||||| |||||||||||||| |||| |||||| ||||| ||||||||||||| ||||||||| |||||||| |||||| | || || |||||||||||| |
|
|
| T |
15942893 |
taagctccagcatacaaatctggttcagctaataggtcactgcattcatgaacaagagagaatattaatctatgagtatcttccaaataaaagtttggac |
15942992 |
T |
|
| Q |
457 |
ttctttttatttggt |
471 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
15942993 |
ttctttttatttggt |
15943007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 19186448 - 19186611
Alignment:
| Q |
30 |
actctgatggctatgatcttgaaggagatttaagcaatggagatgacttaaaagtgtttacctattcatcaataattgtggcaaccaatggcttttcatc |
129 |
Q |
| |
|
||||||||||| ||||||| ||||| ||||||||||||| ||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
19186448 |
actctgatggcgatgatctagaaggcgatttaagcaatgcagatgacctaaaagtgtttagctattcatcaatacttgtggctaccaatggcttttcatc |
19186547 |
T |
|
| Q |
130 |
agaaaacaagttaggacaaggtggctttggacctgttttcaaggtgacccttttttatagtttt |
193 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||||||| |
|
|
| T |
19186548 |
agaaaacaagttaggacagggtggctttggacctgtttttaaggtgacatttttgtatagtttt |
19186611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 34 - 186
Target Start/End: Original strand, 15954116 - 15954268
Alignment:
| Q |
34 |
tgatggctatgatcttgaaggagatttaagcaatggagatgacttaaaagtgtttacctattcatcaataattgtggcaaccaatggcttttcatcagaa |
133 |
Q |
| |
|
||||||| | ||||| |||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |
|
|
| T |
15954116 |
tgatggcgacgatctaaaaggagatttgagcaacggcgatgacttaaaagtgtttagctattcatcaataattgtggctaccaatggcttttcttctgaa |
15954215 |
T |
|
| Q |
134 |
aacaagttaggacaaggtggctttggacctgttttcaaggtgaccctttttta |
186 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15954216 |
aacaagttaggacaaggtggctttggacctgttttcaaggtgaccctttttta |
15954268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 16005626 - 16005782
Alignment:
| Q |
30 |
actctgatggctatgatcttgaaggagatttaagcaatggagatgacttaaaagtgtttacctattcatcaataattgtggcaaccaatggcttttcatc |
129 |
Q |
| |
|
|||||||| || ||||||| ||||| |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
16005626 |
actctgatagcgatgatctagaaggcaatttcagcagtggagatgacttaaaagtgtttagctattcatcaataattgtggccaccaatggcttttcttc |
16005725 |
T |
|
| Q |
130 |
agaaaacaagttaggacaaggtggctttggacctgttttcaaggtgaccctttttta |
186 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
16005726 |
tgaaaacaagttaggacaaggtggctttgaacctgtttttaaggtgaccctttttta |
16005782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 37 - 174
Target Start/End: Original strand, 15941932 - 15942069
Alignment:
| Q |
37 |
tggctatgatcttgaaggagatttaagcaatggagatgacttaaaagtgtttacctattcatcaataattgtggcaaccaatggcttttcatcagaaaac |
136 |
Q |
| |
|
|||| ||||||| |||| ||||||||||| ||||||||||| ||||| |||| |||||||||||||| || || || |||| ||||||||| |||||| |
|
|
| T |
15941932 |
tggcaatgatctagaagttgatttaagcaaaggagatgacttgaaagtatttagctattcatcaataaaagtagctactaatgacttttcatctgaaaac |
15942031 |
T |
|
| Q |
137 |
aagttaggacaaggtggctttggacctgttttcaaggt |
174 |
Q |
| |
|
||||||||||| |||||||||||| | ||||| ||||| |
|
|
| T |
15942032 |
aagttaggacagggtggctttggatcggtttttaaggt |
15942069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 522
Target Start/End: Complemental strand, 16050691 - 16050500
Alignment:
| Q |
331 |
tttagaaatgaattaacactcatttgtaagcttcagcatacaaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacg |
430 |
Q |
| |
|
|||||||| ||| || ||||||||||||||||| ||||||||||| || | ||||| |||||||| ||||||||| |||||||||||| |||| |
|
|
| T |
16050691 |
tttagaaaggaactatcactcatttgtaagcttaagcatacaaattcggtacatctaattggtcattgagttcatgaacaagagagaatgttgatctgtc |
16050592 |
T |
|
| Q |
431 |
agtatatgcccaacaaaagtttggacttctttttatttggtaagatatattaatttctacaatttcttaaggttgtgtatgaatatttgtgt |
522 |
Q |
| |
|
| |||||||| |||||||| ||||| ||||||||||||| | ||| ||||||||| ||| | | |||||| ||| ||||| || |||||||| |
|
|
| T |
16050591 |
aatatatgcctaacaaaagcttggagttctttttatttgatgagaaatattaattgctatagtctcttaaagttctgtattaagatttgtgt |
16050500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 468
Target Start/End: Original strand, 19190283 - 19190467
Alignment:
| Q |
284 |
tagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcatacaaatcttgttcg |
383 |
Q |
| |
|
|||||||||| | || ||||||| |||||||||||||| | | || |||||||| |||||||||||||| || ||||| |||||||||||||| |||| |
|
|
| T |
19190283 |
tagctgtgaaaagacattcaaaatcttctggacaaggagttattgaatttagaaacgaattaacactcatctgcaagctccagcatacaaatctggttca |
19190382 |
T |
|
| Q |
384 |
gctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttctttttattt |
468 |
Q |
| |
|
||| ||||| ||||||||| || ||| ||||||| ||||| |||||| || | || ||||| |||||||||||||||||| |
|
|
| T |
19190383 |
gctgcaaggtcactgcattcataaagaagaacgaatgttgatctatgagtatttgtcaaataaaagcttggacttctttttattt |
19190467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 273 - 471
Target Start/End: Original strand, 19453832 - 19454030
Alignment:
| Q |
273 |
agggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcataca |
372 |
Q |
| |
|
|||||||||||| ||||| || | |||||||||||| |||||||||||||| | ||| || | ||||||||| ||| || ||| | |||||||| ||| |
|
|
| T |
19453832 |
agggcaagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattatggaattcaaaaatgaattggtacttatatgtgaacttcagcacaca |
19453931 |
T |
|
| Q |
373 |
aatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttctttttatttggt |
471 |
Q |
| |
|
|||||||| | ||| | ||| ||||||||||||| ||| || || ||||||| || |||||||| |||||||| ||||| |||| |||||||||| |
|
|
| T |
19453932 |
aatcttgtacaactacttggttgttgcattcatgaagaagaaaggattctaatctatgaatatatgccaaacaaaagcttggatttctatttatttggt |
19454030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 261 - 322
Target Start/End: Complemental strand, 15977231 - 15977170
Alignment:
| Q |
261 |
aattctaccttcagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaa |
322 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
15977231 |
aattctaccttctgagcaagaagtagctgtgaagaaactttcaagaacttctggacaaggaa |
15977170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 273 - 471
Target Start/End: Complemental strand, 19527243 - 19527044
Alignment:
| Q |
273 |
agggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcat-ttgtaagcttcagcatac |
371 |
Q |
| |
|
|||||||||||| ||||| || | |||||||||||| |||||||||||||| | ||| || | ||||||||| ||| || ||| | |||||||| || |
|
|
| T |
19527243 |
agggcaagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattatggaattcaaaaatgaattggtacttatactgtgaacttcagcacac |
19527144 |
T |
|
| Q |
372 |
aaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttctttttatttggt |
471 |
Q |
| |
|
||||||||| | ||| | ||| ||||||||||||| ||| || || ||||||| || |||||||| |||||||| ||||| |||| |||||||||| |
|
|
| T |
19527143 |
aaatcttgtacaactacttggttgttgcattcatgaagaagaaaggattctaatctatgaatatatgccaaacaaaagcttggatttctatttatttggt |
19527044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 199 - 310
Target Start/End: Complemental strand, 16050807 - 16050694
Alignment:
| Q |
199 |
gatgaaacagttgcgattattcagtcatcggttttttaata--gcttttatattcaacacagggaattctaccttcagggcaagaagtagctgtgaagaa |
296 |
Q |
| |
|
||||||||| ||| |||||| |||||| |||||| ||||| | ||||||||| || ||| ||||| ||| || |||| ||||||||| ||||||||| |
|
|
| T |
16050807 |
gatgaaacaattgagattatgtagtcattggttttataataatgtttttatatttaatacaatgaattatacattgagggtaagaagtagttgtgaagaa |
16050708 |
T |
|
| Q |
297 |
actttcaaaaactt |
310 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
16050707 |
actttcaaaaactt |
16050694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 460
Target Start/End: Complemental strand, 19537916 - 19537728
Alignment:
| Q |
272 |
cagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcatac |
371 |
Q |
| |
|
||||||||||||| ||||| || | |||||| ||||| |||||||||||||| ||| || | ||||||||| ||| || ||| | |||||||| || |
|
|
| T |
19537916 |
cagggcaagaagttgctgtaaaaagactttcgaaaacatctggacaaggaattgtggaattcaaaaatgaattggtacttatatgtgaacttcagcacac |
19537817 |
T |
|
| Q |
372 |
aaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttct |
460 |
Q |
| |
|
||||||||| | ||| | ||| ||||||||||||| ||| || || |||| ||||| |||||||| |||||||| ||||| |||| |
|
|
| T |
19537816 |
aaatcttgtacaactacttggttgttgcattcatgaagaagaaaggattctaatttacgaatatatgcctaacaaaagcttggatttct |
19537728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 471
Target Start/End: Original strand, 19338804 - 19339003
Alignment:
| Q |
272 |
cagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcatac |
371 |
Q |
| |
|
|||| |||||||| ||||| || | |||||||||||| |||||||||||||| ||| || ||||||||||| || | || ||| | ||||| || || |
|
|
| T |
19338804 |
caggacaagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattgtggaattcagaaatgaattggcattgatatgtgaacttcaacacac |
19338903 |
T |
|
| Q |
372 |
aaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttctttttatttggt |
471 |
Q |
| |
|
||||||||| | ||| | ||| ||||||||||||| ||| || || |||| ||||| |||||||| || ||||| ||||| |||| | |||||||| |
|
|
| T |
19338904 |
aaatcttgtacaactacttggttgttgcattcatgaagaagaaaggattctaatttacgaatatatgccaaataaaagcttggatttctatctatttggt |
19339003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 471
Target Start/End: Original strand, 19356831 - 19357030
Alignment:
| Q |
272 |
cagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcatac |
371 |
Q |
| |
|
|||| |||||||| ||||| || | |||||||||||| |||||||||||||| ||| || ||||||||||| || | || ||| | ||||| || || |
|
|
| T |
19356831 |
caggacaagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattgtggaattcagaaatgaattggcattgatatgtgaacttcaacacac |
19356930 |
T |
|
| Q |
372 |
aaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttctttttatttggt |
471 |
Q |
| |
|
||||||||| | ||| | ||| ||||||||||||| ||| || || |||| ||||| |||||||| || ||||| ||||| |||| | |||||||| |
|
|
| T |
19356931 |
aaatcttgtacaactacttggttgttgcattcatgaagaagaaaggattctaatttacgaatatatgccaaataaaagcttggatttctatctatttggt |
19357030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 475
Target Start/End: Original strand, 19378370 - 19378573
Alignment:
| Q |
272 |
cagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcatac |
371 |
Q |
| |
|
||||||||||||| ||||| || | ||||||||||| |||| ||||||||| ||| |||| ||||||||| ||| || ||| | |||||||| || |
|
|
| T |
19378370 |
cagggcaagaagttgctgtaaaaaggctttcaaaaacatctgtacaaggaattgtggaatttaaaaatgaattggtacttatatgtgaacttcagcacac |
19378469 |
T |
|
| Q |
372 |
aaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttctttttatttggt |
471 |
Q |
| |
|
||||||||| | ||| | ||| |||||||||||| ||| || || |||| ||||| |||||||| |||||||| |||| |||| | |||||||| |
|
|
| T |
19378470 |
aaatcttgtacaactacttggttgttgcattcatgaggaagaaaggattctaatttacgaatatatgccaaacaaaagcctggatttctatctatttggt |
19378569 |
T |
|
| Q |
472 |
aaga |
475 |
Q |
| |
|
|||| |
|
|
| T |
19378570 |
aaga |
19378573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 471
Target Start/End: Complemental strand, 19552209 - 19552010
Alignment:
| Q |
272 |
cagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcatac |
371 |
Q |
| |
|
||||||||||||| ||||| || | |||||||||||| |||||||||||||| ||| || | ||||||||| ||| || ||| | |||||||| | |
|
|
| T |
19552209 |
cagggcaagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattgtggaattcaaaaatgaattggtacttatatgtgaacttcagcacaa |
19552110 |
T |
|
| Q |
372 |
aaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttctttttatttggt |
471 |
Q |
| |
|
||||||||| | ||| | ||| ||||||||||||| ||| || || | ||||| || |||||||| |||||||| ||||| |||| | |||||||| |
|
|
| T |
19552109 |
aaatcttgtacaactacttggttgttgcattcatgaagaagaaaggattctgatctatgaatatatgccaaacaaaagcttggatttctatctatttggt |
19552010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 471
Target Start/End: Original strand, 19580479 - 19580678
Alignment:
| Q |
272 |
cagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcatac |
371 |
Q |
| |
|
||||||||||||| ||||| || | |||||||||||| |||||||||||||| ||| || | ||||||||| ||| || ||| | |||||||| | |
|
|
| T |
19580479 |
cagggcaagaagttgctgtaaaaagactttcaaaaacatctggacaaggaattgtggaattcaaaaatgaattggtacttatatgtgaacttcagcacaa |
19580578 |
T |
|
| Q |
372 |
aaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttctttttatttggt |
471 |
Q |
| |
|
||||||||| | ||| | ||| ||||||||||||| ||| || || | ||||| || |||||||| |||||||| ||||| |||| | |||||||| |
|
|
| T |
19580579 |
aaatcttgtacaactacttggttgttgcattcatgaagaagaaaggattctgatctatgaatatatgccaaacaaaagcttggatttctatctatttggt |
19580678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 471
Target Start/End: Original strand, 19406888 - 19407087
Alignment:
| Q |
272 |
cagggcaagaagtagctgtgaagaaactttcaaaaacttctggacaaggaatgacggagtttagaaatgaattaacactcatttgtaagcttcagcatac |
371 |
Q |
| |
|
||||||||||||| || | || | |||||||||||| |||||||||||||| | ||| || | ||||||||| ||| || ||| | |||||||| | |
|
|
| T |
19406888 |
cagggcaagaagttgccataaaaagactttcaaaaacatctggacaaggaattatggaattcaaaaatgaattggtacttatatgtgaacttcagcacat |
19406987 |
T |
|
| Q |
372 |
aaatcttgttcggctaatcggtcattgcattcatgaacgagagagaatgttaatctacgagtatatgcccaacaaaagtttggacttctttttatttggt |
471 |
Q |
| |
|
||||||||| | ||| | ||| ||||||||||||| ||| || || ||||||| | |||||||| |||||||| ||||| |||| | |||||||| |
|
|
| T |
19406988 |
aaatcttgtacaactacttggttgttgcattcatgaagaagaaaggattctaatctataaatatatgccaaacaaaagcttggatttctatctatttggt |
19407087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 174
Target Start/End: Complemental strand, 15698205 - 15698171
Alignment:
| Q |
140 |
ttaggacaaggtggctttggacctgttttcaaggt |
174 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| |
|
|
| T |
15698205 |
ttaggagaaggtggctttggacctgttttcaaggt |
15698171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 19356560 - 19356616
Alignment:
| Q |
121 |
cttttcatcagaaaacaagttaggacaaggtggctttggacctgttttcaaggtgac |
177 |
Q |
| |
|
||||||||| ||||||||||||||||| || |||| |||||| |||| |||||||| |
|
|
| T |
19356560 |
cttttcatctgaaaacaagttaggacagggaggctatggacccgtttataaggtgac |
19356616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 19501648 - 19501592
Alignment:
| Q |
121 |
cttttcatcagaaaacaagttaggacaaggtggctttggacctgttttcaaggtgac |
177 |
Q |
| |
|
||||||| | ||||||||||||||||| || |||| ||||||||||| |||||||| |
|
|
| T |
19501648 |
cttttcacctgaaaacaagttaggacagggaggctatggacctgtttataaggtgac |
19501592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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