View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0082_low_5 (Length: 248)
Name: NF0082_low_5
Description: NF0082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0082_low_5
[» ] chr7 (16 HSPs)
[» ] chr6 (10 HSPs)
[» ] chr5 (10 HSPs)
[» ] scaffold0657 (1 HSPs)
[» ] chr3 (13 HSPs)
[» ] chr2 (15 HSPs)
[» ] chr1 (16 HSPs)
[» ] scaffold0413 (1 HSPs)
[» ] chr4 (8 HSPs)
[» ] scaffold0041 (1 HSPs)
[» ] scaffold1838 (1 HSPs)
[» ] scaffold0120 (1 HSPs)
[» ] scaffold0013 (2 HSPs)
[» ] scaffold0002 (1 HSPs)
[» ] scaffold0069 (1 HSPs)
Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 15873233 - 15873451
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
15873233
aattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
15873332
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
T
15873333
ttcaaagcatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatg
15873431
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
15873432
ccacaaaatagatagtatca
15873451
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 10288047 - 10288266
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaa-atttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaa
127
Q
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
T
10288047
aattaaaactcttaaactaatatccttcaaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaaa
10288146
T
Q
128
cttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaat
227
Q
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
T
10288147
cttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaat
10288245
T
Q
228
gccacaaaatagatagtatca
248
Q
|||||||||||||||||||||
T
10288246
gccacaaaatagatagtatca
10288266
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 11035641 - 11035858
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||| |||||||||
T
11035641
aattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaattttgtcccc-gtacgcacttcaagcaaaaac
11035739
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
T
11035740
ttcaaagcatagaccatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatg
11035838
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
11035839
ccacaaaatagatagtatca
11035858
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 13163530 - 13163714
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||| |||||| | |||||||
T
13163530
aattaaaactcttaaactaatatccttcaaaaatttctattaaagttacaattcaatcaaaaacccaattttgtccctcgtacgcacttcaaacaaaaac
13163629
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
|||||| |||||| ||||| |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||
T
13163630
ttcaaagcatagaccatctattctttggtatctaaaatattagtgtaagggtcaatttccttaaccaaattggttcatactcaaa
13163714
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 22078531 - 22078358
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| || ||||||||||| | |||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||||| ||||||
T
22078531
ttacaattcgattaaaaacccaatat-gtcccccgtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatattagtg
22078433
T
Q
174
taagggtcaatttccttatccaaattggttcat-actcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||
T
22078432
taagggtcaatttccttatccaaattggttcataactc-aaagtacaagaacaatgccacaaaatagatagtatca
22078358
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 12911034 - 12911207
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||||||| |||||| ||| ||| |||||||||||||||| ||||||
T
12911034
ttacaattcgatcaaaaacccaattt-gtcccccgtacgcacttcaagcaaaaacttcaaagcatagaccatatctgctttggtacctaaaatattagtg
12911132
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatca
248
Q
||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||
T
12911133
taagggtcaattttcttatccaaattggttcatactc-aaagcacaagaaacaatgtcataaaatagatagtatca
12911207
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 12196057 - 12196195
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||
T
12196057
ttacaattcgatcaaaaacccaattt-gtcccccgtacgcacttcaagcaaaaacttcaaagtatagaccatctcttctttggtacctaaaatgttagtg
12196155
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaa
213
Q
|||| |||||||||||||||||||||||||||||||||||
T
12196156
taagagtcaatttccttatccaaattggttcatactcaaa
12196195
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 40106715 - 40106542
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| |||||||| ||||||| |||||||||| |||||| ||||||||||||||| |||||| |||||||||| |||||||||||| ||| ||
T
40106715
ttacaattcgatcaaaaatccaattt-gtcccccgtacgcacttcaagcaaaaacttcaaagcatagacaatctcttcttaggtacctaaaattttaatg
40106617
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatca
248
Q
||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||
T
40106616
taagggtcaatttccatatccaaattggttcatactc-aaagcacaagaaacaatgtcataaaatagatagtatca
40106542
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 48653131 - 48653278
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtccccc-gtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagt
172
Q
||||||||| || ||||||||||||| ||||||| ||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||||| ||| |
T
48653131
ttacaattcgat-aaaaacccaattt-gtcccccggtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatattaat
48653228
T
Q
173
gtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaa
223
Q
|||||||||||||||||||||||||||||||||||||| ||||||||||||
T
48653229
gtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaa
48653278
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 49169641 - 49169815
Alignment:
Q
74
ttacaattcaa-tcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagt
172
Q
||||||||||| | |||||| |||||| ||||| |||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||| |
T
49169641
ttacaattcaaataaaaaactcaattt-gtcccacgtacgcacttcaagcaaaaacttcaaatcatagaacatctcttctttggtacctaaaatgttaat
49169739
T
Q
173
gtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatca
248
Q
||| |||||||||| ||||||||||||||||||||||| ||||||| || ||||||| || |||||||||| |||||
T
49169740
gtaggggtcaattttcttatccaaattggttcatactc-aaagcaccagaaacaatgtcataaaatagataatatca
49169815
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 78 - 248
Target Start/End: Complemental strand, 9994220 - 9994053
Alignment:
Q
78
aattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaag
177
Q
|||| ||| |||||||||||||||||||| || |||| ||||||||| |||| |||| | ||| ||||||||| |||||||||||||||||| ||
T
9994220
aatttaattaaaaacccaatttcgtccccgc---acgcttcaagcaaaaacaccaaagcatacaccatgtcttctttgatacctaaaatgttagtgttag
9994124
T
Q
178
ggtc-aatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
|| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
T
9994123
gggccaatttccttatccaaattggttcatactcaaa-gcacaagaacaatgccacaaaatagatagtatca
9994053
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 147 - 246
Target Start/End: Original strand, 21490863 - 21490962
Alignment:
Q
147
tcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagta
245
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || |||||||||||||
T
21490863
tcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaaacaatgtcataaaatagatagta
21490961
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 147 - 248
Target Start/End: Original strand, 18366701 - 18366802
Alignment:
Q
147
tcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagta
245
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| || |||||||||||||
T
18366701
tcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatac-ccaaagcacaagaaacaatgtcataaaatagatagta
18366799
T
Q
246
tca
248
Q
|||
T
18366800
tca
18366802
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 9554543 - 9554619
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatca
248
Q
||||||||||||||| |||||| ||| |||||||||||| |||||||||| ||||||| | ||| ||||||||||||
T
9554543
tgtaagggtcaattttcttatctaaactggttcatactc-aaagcacaagaaacaatgttataaagtagatagtatca
9554619
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 179
Target Start/End: Original strand, 1322294 - 1322326
Alignment:
Q
147
tcttctttggtacctaaaatgttagtgtaaggg
179
Q
||||||||||||||||||||||| |||||||||
T
1322294
tcttctttggtacctaaaatgttggtgtaaggg
1322326
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 24053092 - 24053164
Alignment:
Q
29
aattaaaactcttaaattaa-tatccttcaaaaatttctactaaagttacaattcaatc-aaaaacccaattt
99
Q
|||||||| ||||||||||| |||||||||||||| ||| | ||||| ||||| |||| |||||||||||||
T
24053092
aattaaaattcttaaattaaatatccttcaaaaatctcttatgaagttgcaattaaatcaaaaaacccaattt
24053164
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 34637136 - 34636918
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
T
34637136
aattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaatccaatttcgtcccccgtatacacttccagcaaaaac
34637037
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
T
34637036
ttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatac-ccaaagcacaagaacaatg
34636938
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
34636937
ccacaaaatagatagtatca
34636918
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 10750886 - 10751104
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
T
10750886
aattaaaactcttaaactaatatcattcaaaaatttctactgaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaaac
10750985
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
T
10750986
ttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatg
10751084
T
Q
229
ccacaaaatagatagtatca
248
Q
||||| ||||||||||||||
T
10751085
ccacataatagatagtatca
10751104
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 32449523 - 32449741
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||
T
32449523
aattaaaactcttaaacttaaatccttcaaaaatttctacctaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaagaac
32449622
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
T
32449623
ttcaatgcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatg
32449721
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
32449722
ccacaaaatagatagtatca
32449741
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 34 - 248
Target Start/End: Original strand, 26181955 - 26182168
Alignment:
Q
34
aaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaa
133
Q
||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||||| ||||||||||||||
T
26181955
aaactcttaaactaatatccttcaaaagtttctactaaagttacaattcaatcaaaaacccaattttgttccccgtacgcacttcaagcaaaaacttcaa
26182054
T
Q
134
aacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccaca
233
Q
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||
T
26182055
agcatagaccatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatcaaaattggttcatactc-aaagcaccggaacaatgtcatg
26182153
T
Q
234
aaatagatagtatca
248
Q
||||||||| |||||
T
26182154
aaatagataatatca
26182168
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 23259887 - 23260126
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaa-atttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaa
127
Q
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||
T
23259887
aattaaaactcttaaactaatatccttcaaaaaatttctactaaagttacaattcaatcaaaaacccaatttcatcccccgtacgcacttcaagcaaaaa
23259986
T
Q
128
cttcaaaacatagatcatc--------------------tcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcata
207
Q
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
23259987
cttcaaagcatagatcatctcttctttggtacctaaaattcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcata
23260086
T
Q
208
ctcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
||| |||||||||||||||||||||||||||||||||||||
T
23260087
ctc-aaagcacaagaacaatgccacaaaatagatagtatca
23260126
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 248
Target Start/End: Original strand, 13772725 - 13772885
Alignment:
Q
87
aaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaattt
186
Q
||||||||||||| |||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| ||||||||
T
13772725
aaaaacccaattt-gtcccccgtacgcacttctagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatattagtgtaagagtcaattt
13772823
T
Q
187
ccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatca
248
Q
|||||||||||||||||||||||| |||||||||| ||||||| || || ||||||| |||||
T
13772824
ccttatccaaattggttcatactc-aaagcacaagaaacaatgtcataatatagataatatca
13772885
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 24164623 - 24164522
Alignment:
Q
147
tcttctttggtacctaaaatgttagtgtaaggg-tcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagta
245
Q
|||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||
T
24164623
tcttatttggtacctaaaatgttggtgtaaggggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatgtcataaaatagatagta
24164525
T
Q
246
tca
248
Q
|||
T
24164524
tca
24164522
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 20559625 - 20559542
Alignment:
Q
147
tcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgcca
231
Q
||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
T
20559625
tcttctttgatacctaaaatgttactgtaagggtcaatttctttatccaaattggttcatactc-aaagcacaagaacaatgcca
20559542
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 11166052 - 11166126
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaa-gaacaatgccacaaaatagatagtat
246
Q
||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||||
T
11166052
tgtaagggtcaatttccgtatccaaattggttcatact-gaaagcacaataaacaatgctctaaaatagatagtat
11166126
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 31275943 - 31275975
Alignment:
Q
182
aatttccttatccaaattggttcatactcaaaa
214
Q
|||||||||||||||||||||||||||| ||||
T
31275943
aatttccttatccaaattggttcatacttaaaa
31275975
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 537769 - 537551
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
T
537769
aattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatgcacttccagcaaaaac
537670
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
T
537669
ttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatac-ccaaagcacaagaacaatg
537571
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
537570
ccacaaaatagatagtatca
537551
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 6309644 - 6309461
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtccccc-gtatacacttccagcaaaaa
127
Q
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| ||||||||
T
6309644
aattaaaactc--aaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaattttgtccccccgtatgcacttcaagcaaaaa
6309547
T
Q
128
cttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
6309546
cttcaaagcatagaccatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaa
6309461
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 42862277 - 42862105
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
|||||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||||
T
42862277
ttacaattcaatcaaaaatccaattt-gtcccccgtacgcacttcaagcaaaaacttcaaagcataaatcatctcttctttggtacctaaaatattagtg
42862179
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
||||||||||||| |||||||||||| ||| |||||| ||||||| | ||||||| || ||||||||||||||||
T
42862178
taagggtcaattttcttatccaaattagtttatactc-aaagcaccaaaacaatgtcataaaatagatagtatca
42862105
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 74 - 213
Target Start/End: Complemental strand, 40691781 - 40691641
Alignment:
Q
74
ttacaattcaa-tcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagt
172
Q
||||||||||| |||||||| |||||| ||||||||| |||||| ||||||||||| ||| |||||| ||| ||||||||||||||||||||||||||
T
40691781
ttacaattcaaatcaaaaactcaatttgttcccccgtacgcacttcaagcaaaaactttaaagcatagaccatatcttctttggtacctaaaatgttagt
40691682
T
Q
173
gtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
|||||||||||||||||||||||||||||||||||||||||
T
40691681
gtaagggtcaatttccttatccaaattggttcatactcaaa
40691641
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 38001883 - 38001710
Alignment:
Q
74
ttacaattcaatcaaaaa-cccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagt
172
Q
||||||||| |||||||| |||||||| ||||| |||| |||||| ||||||||||||||| |||||| ||||||||||||| |||||||||| |||||
T
38001883
ttacaattcgatcaaaaaacccaattt-gtccctcgtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttgatacctaaaatattagt
38001785
T
Q
173
gtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
||||| | |||||||||||||||||||||||||||| ||||| ||| | ||||||| || ||||||||||||||||
T
38001784
gtaagagccaatttccttatccaaattggttcatacacaaaa-caccaaaacaatgtcataaaatagatagtatca
38001710
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 74 - 214
Target Start/End: Complemental strand, 30910662 - 30910523
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| |||||||||||||||| || || |||| ||||| ||||||||||||||| |||| | |||||||||||| ||||||||||| ||||||
T
30910662
ttacaattcgatcaaaaacccaattt-gttcctcgtacgcactttaagcaaaaacttcaaagcataaaccatctcttctttcgtacctaaaatattagtg
30910564
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaaa
214
Q
|||||||||||||||||||||||||||||||||||||||||
T
30910563
taagggtcaatttccttatccaaattggttcatactcaaaa
30910523
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 23211249 - 23211180
Alignment:
Q
178
ggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||
T
23211249
ggtcaatttccttatccaaattggttcatactc-aaagcacaataacaatgccacaaagtagatagtatca
23211180
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 141
Target Start/End: Complemental strand, 42640376 - 42640267
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||| ||||||||||||||||||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| ||||| |||||| |||||||||
T
42640376
aattaaaattcttaaattaatatccttc-aaaattacttctaaaattacaattcaat-aaaaatccaa-ttcgtccaccgtacgcacttcaagcaaaaac
42640280
T
Q
129
ttcaaaacataga
141
Q
|||||| ||||||
T
42640279
ttcaaagcataga
42640267
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 27027223 - 27027155
Alignment:
Q
32
taaaactcttaaattaat-atccttcaaaaatttctactaaagttacaattcaatcaaaaacccaattt
99
Q
||||| ||||||| |||| || |||||||||||||| ||||||||||||||||||||||||||||||||
T
27027223
taaaattcttaaaataattatacttcaaaaatttcttctaaagttacaattcaatcaaaaacccaattt
27027155
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 4557364 - 4557450
Alignment:
Q
74
ttacaattca-atcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacc
160
Q
|||||||||| |||||||||||||||| |||||||||| |||||| | ||||||||||||| |||||| ||||||||| ||||||||
T
4557364
ttacaattcatatcaaaaacccaattt-gtcccccgtacgcacttcaaacaaaaacttcaaagcatagaccatctcttcattggtacc
4557450
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0657 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0657
Description:
Target: scaffold0657; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 1595 - 1813
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
T
1595
aattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatgcacttccagcaaaaac
1694
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
T
1695
ttcaaagtatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatac-ccaaagcacaagaacaatg
1793
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
1794
ccacaaaatagatagtatca
1813
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 16976267 - 16976049
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||
T
16976267
aattaaaactcttaaactaatatccttcaaaaatttctactaaagttacaattcaatcaaaaactcaatttcgtcccccgtacgcacttcaagcaaaaac
16976168
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
T
16976167
ttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaa-cacaagaacaatg
16976069
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
16976068
ccacaaaatagatagtatca
16976049
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 5003987 - 5004204
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
T
5003987
aattaaaactcttaact-aatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaaac
5004085
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
T
5004086
ttcaaagcatagatcatctcttatttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaata
5004184
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
5004185
ccacaaaatagatagtatca
5004204
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 46403855 - 46404075
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaa--atttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaa
126
Q
|||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
T
46403855
aattaaaactcttatactaatatccttcaaaataattactactaaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa
46403954
T
Q
127
acttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaa
226
Q
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
T
46403955
acttcaaagcatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaa
46404053
T
Q
227
tgccacaaaatagatagtatca
248
Q
||||| ||||||||||||||||
T
46404054
tgccataaaatagatagtatca
46404075
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 31 - 248
Target Start/End: Original strand, 7335952 - 7336167
Alignment:
Q
31
ttaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaactt
130
Q
||||||||| |||| ||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||
T
7335952
ttaaaactcgtaaactaagatccttcaaaa-tttctactaaagttacaattcaatcacaaacccaatttcgtcccccgtacgcacttcaagcaaaaactt
7336050
T
Q
131
caaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgcc
230
Q
|||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
T
7336051
caaagcataaatcatctcttctttgttacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatgcc
7336149
T
Q
231
acaaaatagatagtatca
248
Q
||||||||||||||||||
T
7336150
acaaaatagatagtatca
7336167
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 32 - 248
Target Start/End: Original strand, 43277302 - 43277518
Alignment:
Q
32
taaaactcttaaattaat-atccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaactt
130
Q
||||| ||||||| |||| ||||||||||||||| | ||||||||||||||||||||||||||||| || || ||||||| |||||| |||||||||
T
43277302
taaaattcttaaaataattatccttcaaaaatttattctaaagttacaattcaatcaaaaacccaactt-gttccccgtacgcacttcaagcaaaaacac
43277400
T
Q
131
caaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagca-caagaacaatgc
229
Q
|||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||
T
43277401
caaagtatagaccatctcttctttagtacctaaaatattagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcaccataaacaatgt
43277499
T
Q
230
cacaaaatagatagtatca
248
Q
|| ||||||||||||||||
T
43277500
cataaaatagatagtatca
43277518
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 74 - 247
Target Start/End: Complemental strand, 9105001 - 9104829
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| || |||||||||||| |||||||||| |||||| |||| |||||||||| |||||| ||||||||||||||||||||||| ||||||
T
9105001
ttacaattcgatttaaaacccaattt-gtcccccgtacgcacttcaagcagaaacttcaaagcatagacaatctcttctttggtacctaaaatattagtg
9104903
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatc
247
Q
|||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||||||||
T
9104902
caaggatcaatttccttatccaaattggttcatactc-aaagcacaagaaacaatgccataaaataaatagtatc
9104829
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 8731575 - 8731473
Alignment:
Q
147
tcttctttggtacctaaaatgttagtgtaaggg-tcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagt
244
Q
|||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||
T
8731575
tcttctttagtacctaaaatgttgatgtaaggggtcaatttccttatccaaattggttcatactc-aaagcacaagaaacaatgccataaaatagatagt
8731477
T
Q
245
atca
248
Q
||||
T
8731476
atca
8731473
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 9083462 - 9083360
Alignment:
Q
147
tcttctttggtacctaaaatgttagtgtaaggg-tcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagt
244
Q
|||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||
T
9083462
tcttctttagtacctaaaatgttgatgtaaggggtcaatttccttatccaaattggttcatactc-aaagcacaagaaacaatgccataaaatagatagt
9083364
T
Q
245
atca
248
Q
||||
T
9083363
atca
9083360
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 11937263 - 11937329
Alignment:
Q
147
tcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
T
11937263
tcttctttggtacctaaaatattagtgtaagggtcaatttccttatccaaattggttcatattcaaa
11937329
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 5704722 - 5704648
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtat
246
Q
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||
T
5704722
tgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaaacaatgctctaaaatagatagtat
5704648
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 1461564 - 1461494
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagata
242
Q
|||||| ||||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||||||||
T
1461564
tgtaagagtcaatttccttatccaaattagttcatactc-aaagcacaagaaacaatgccctaaaatagata
1461494
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 37979904 - 37979833
Alignment:
Q
29
aattaaaactcttaaattaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaattt
99
Q
|||||||| ||||||||||| |||||||||||||| | | |||||||| ||||| |||||||||||||||||
T
37979904
aattaaaattcttaaattaaatatccttcaaaaatctattctaaagttgcaattaaatcaaaaacccaattt
37979833
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 17542113 - 17542145
Alignment:
Q
181
caatttccttatccaaattggttcatactcaaa
213
Q
||||||||||||||||||| |||||||||||||
T
17542113
caatttccttatccaaattagttcatactcaaa
17542145
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 172; Significance: 2e-92; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 40448429 - 40448212
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
T
40448429
aattaaaactcttaaactaatatccttcaaaa-tttctactcaagttacaattcaatcaaaaacccaatttcgtcccccgtaagcacttcaagcaaaaac
40448331
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
T
40448330
ttcaaagtatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatg
40448232
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
40448231
ccacaaaatagatagtatca
40448212
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 32 - 213
Target Start/End: Original strand, 34397115 - 34397296
Alignment:
Q
32
taaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttc
131
Q
||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| |||||| || ||||||| ||||| ||||||||||||
T
34397115
taaaactcttaaactaatatccttcaaaaatttctactaaagttacattccaatcaaaaactcaattttgttccccgtacgtacttcaagcaaaaacttc
34397214
T
Q
132
aaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
T
34397215
aaagctcagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttattcaaattgattcatactcaaa
34397296
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 29 - 213
Target Start/End: Complemental strand, 44789454 - 44789272
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||| |||| |||
T
44789454
aattaaaactcttaaactaatatccttcaaaagtttctactaaagttacaattcaattaaaaacccaattttgtcccatgtacgcacttcaggcaataac
44789355
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
|||||| |||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
T
44789354
ttcaaagcatagacca--tcttctttggtacctaaaatgttagtgtgagggtcaatttccttatccaaattggttcatactcaaa
44789272
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 40728733 - 40728905
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||
T
40728733
ttacaattcgatcaaaaacccaattt-gtcccccgtacgcacttcaagcaaaaacttcaaagcatagactatctcttctttggtacctaaaatattagtg
40728831
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
||||||||||||||||||| ||||||||||||||||| ||||||| | ||||||| || ||||||||||||||||
T
40728832
taagggtcaatttccttattcaaattggttcatactc-aaagcaccaaaacaatgtcataaaatagatagtatca
40728905
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 18292047 - 18292184
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| ||||||| |||||||| |||||| ||| |||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||
T
18292047
ttacaattcgatcaaaa-cccaattta-tcccccatatgcacttcaagcaaaaacttcaaagcataaatcatctcttctttggtacctaaaatgttagtg
18292144
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaa
213
Q
||||||||||||||||||||||||||||||||| ||||||
T
18292145
taagggtcaatttccttatccaaattggttcatcctcaaa
18292184
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 35670071 - 35670243
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| || ||||||| ||||| |||||||| | |||||| ||||||||||||||| |||| | |||||||||||||||||||||||| ||||||
T
35670071
ttacaattcgat-aaaaacctaattt-gtcccccgaacgcacttcaagcaaaaacttcaaagcatataccatctcttctttggtacctaaaatattagtg
35670168
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatca
248
Q
||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| || ||||||||||||||||
T
35670169
taagggtcaatttccttatccaaattggttcctactc-aaagcacaagaaacaatgtcataaaatagatagtatca
35670243
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 218
Target Start/End: Original strand, 41339556 - 41339700
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaa-acttcaaaacatagatcatctcttctttggtacctaaaatgttagt
172
Q
||||||||| || ||||||| ||||| ||||||| || |||||| ||||||| |||||||| ||| || ||||| |||||| ||||||||||| |||||
T
41339556
ttacaattcgataaaaaacctaattt-gtcccccatacgcacttcaagcaaaaaacttcaaagcatggaccatcttttctttcgtacctaaaatattagt
41339654
T
Q
173
gtaagggtcaatttccttatccaaattggttcatactcaaaagcac
218
Q
||||||||||||||||||||||||||||||||||||||||||||||
T
41339655
gtaagggtcaatttccttatccaaattggttcatactcaaaagcac
41339700
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 245
Target Start/End: Original strand, 12773805 - 12773906
Alignment:
Q
144
atctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagata
242
Q
|||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||||| || || |||||||
T
12773805
atctcttctttggtacctaaaaggttagtgtaagtgtcaattttcttatccaaattggttcatactc-aaagcacaagaaacaatgtcataagatagata
12773903
T
Q
243
gta
245
Q
|||
T
12773904
gta
12773906
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 29271415 - 29271339
Alignment:
Q
147
tcttctttggtacctaaaatgttagtgtaaggg-tcaatttccttatccaaattggttcatactcaaaagcacaagaa
223
Q
||||||||| ||||||||||||| ||||| ||| ||||||||||| |||||||||||||||||| |||||||||||||
T
29271415
tcttctttgatacctaaaatgttggtgtatgggctcaatttccttgtccaaattggttcatact-aaaagcacaagaa
29271339
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 23827789 - 23827863
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtat
246
Q
||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||
T
23827789
tgtaagggttaatttccttatccaaattggttcatactc-aaagcacaagaaacaatgctctaaaatagatagtat
23827863
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 28266551 - 28266592
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
||||||||||||||||||||||||||||||||||||||||||
T
28266551
tgtaagggtcaatttccttatccaaattggttcatactcaaa
28266592
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 28266408 - 28266470
Alignment:
Q
29
aattaaaactcttaaattaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaa
90
Q
|||||||| ||||||| ||| |||||||||||||||||| |||||||||||||| ||| ||||
T
28266408
aattaaaattcttaaaataaatatccttcaaaaatttcttctaaagttacaatttaattaaaa
28266470
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 11387746 - 11387707
Alignment:
Q
174
taagggtcaatttccttatccaaattggttcatactcaaa
213
Q
||||||| ||||| ||||||||||||||||||||||||||
T
11387746
taagggttaattttcttatccaaattggttcatactcaaa
11387707
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 169
Target Start/End: Original strand, 27976402 - 27976430
Alignment:
Q
141
atcatctcttctttggtacctaaaatgtt
169
Q
|||||||||||||||||||||||||||||
T
27976402
atcatctcttctttggtacctaaaatgtt
27976430
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 169
Target Start/End: Original strand, 28062930 - 28062958
Alignment:
Q
141
atcatctcttctttggtacctaaaatgtt
169
Q
|||||||||||||||||||||||||||||
T
28062930
atcatctcttctttggtacctaaaatgtt
28062958
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 339056 - 338839
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
T
339056
aattaaaactcttaaactaatatccttcaaaa-tttctactcaagttacaattcaatcaaaaacccaatttcgtcccccgtaagcacttcaagcaaaaac
338958
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
T
338957
ttcaaagtatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatg
338859
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
338858
ccacaaaatagatagtatca
338839
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 43406625 - 43406842
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||
T
43406625
aattaaaactcttaaactaatatccttcaaaa-tttctactcaagttacaattcaatcaaaaacccaatttcgtcccctgtacgcacttcaagcaaaaac
43406723
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
T
43406724
ttcaaagcatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatg
43406822
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
43406823
ccacaaaatagatagtatca
43406842
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 46 - 248
Target Start/End: Original strand, 37666454 - 37666654
Alignment:
Q
46
taatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcat
145
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| || |||| ||||||||||
T
37666454
taatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaa-ctacaaagcatagatcat
37666552
T
Q
146
ctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagta
245
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
T
37666553
ctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatgccacaaaatagatagta
37666651
T
Q
246
tca
248
Q
|||
T
37666652
tca
37666654
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 29 - 241
Target Start/End: Original strand, 35761287 - 35761499
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||
T
35761287
aattaaaactcttaaactaatatccttaaaaaatttatactaaagttacaattcaatcaaaaatccaatttcgtcccccgtacgcacttcaagcaaaaac
35761386
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaat
227
Q
|||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||
T
35761387
ttcaaagcatagacaatatcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaaaccat
35761485
T
Q
228
gccacaaaatagat
241
Q
|||| |||||||||
T
35761486
gccataaaatagat
35761499
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 78 - 248
Target Start/End: Original strand, 18472249 - 18472417
Alignment:
Q
78
aattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaag
177
Q
||||| |||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||| |||||||||||||||| ||||||| ||||||||||
T
18472249
aattcgatcaaaaacccaattt-gtcccccgtacacacttcaagcaaaaacttcaaagcatagaccatctcttctttggtatctaaaatattagtgtaag
18472347
T
Q
178
ggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
||||||||| ||||||||||||||||||||||| ||||||| | ||||||| || ||||||||||||||||
T
18472348
ggtcaattttcttatccaaattggttcatactc-aaagcaccaaaacaatgtcataaaatagatagtatca
18472417
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 6836799 - 6836626
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtccccc-gtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagt
172
Q
|||||||||||| ||||||||||||| |||||| ||| |||||| |||||| || |||| |||| | ||| |||||||||||||||||||||||||
T
6836799
ttacaattcaat-aaaaacccaatttgttccccccgtacgcacttcaagcaaacacaccaaagcatacaccattccttctttggtacctaaaatgttagt
6836701
T
Q
173
gtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
T
6836700
gtaagggtcaatttccttatccaaattggttcatact-taaagcacaagaacaatgccacaaaatagatagtatca
6836626
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 123 - 248
Target Start/End: Complemental strand, 8422412 - 8422287
Alignment:
Q
123
aaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-
221
Q
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
T
8422412
aaaaacttcaaagcatagaccatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcaccaga
8422314
T
Q
222
aacaatgccacaaaatagatagtatca
248
Q
||||||| || |||||||||| |||||
T
8422313
aacaatgtcataaaatagataatatca
8422287
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 24276192 - 24276117
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
|||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| ||||
T
24276192
tgtaagggtcaatttctttatccaaattggttcatactc-aaagtacaagaacaatgccacaaagtagatagcatca
24276117
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 242
Target Start/End: Original strand, 24055667 - 24055736
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagata
242
Q
|||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||
T
24055667
tgtaggggtcaatttccttatccaaattggttgatactc-aaagcacaagaacaatgccacaaagtagata
24055736
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 19198203 - 19198278
Alignment:
Q
175
aagggtcaatttccttatccaaattggttcatactcaaaagcacaag---aacaatgccacaaaatagatagtatca
248
Q
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||
T
19198203
aagggtcaatttccttatccaaattggttcatactc-aaagcacaagataaacaatgtcataaaatagatagtatca
19198278
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 25647880 - 25647809
Alignment:
Q
29
aattaaaactcttaaattaa-tatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaattt
99
Q
|||||||| ||||||||||| |||||||||||||| ||| |||||||| ||||| |||||||||||||||||
T
25647880
aattaaaattcttaaattaaatatccttcaaaaatctcttctaaagttgcaattaaatcaaaaacccaattt
25647809
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 33007051 - 33007127
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatca
248
Q
||||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||| || |||||||||| |||||
T
33007051
tgtaagggtcaatttccttatccaaattgattcatactc-aaagcaccagaaacaatgtcataaaatagataatatca
33007127
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 33009198 - 33009123
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatc
247
Q
||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||| || ||| |||||||||||
T
33009198
tgtaagggtcaattttcttatccaaattggttcatgctc-aaagcacaagaaacaatgtcataaagtagatagtatc
33009123
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 16075527 - 16075468
Alignment:
Q
155
ggtacctaaaatgttagtgtaaggg-tcaatttccttatccaaattggttcatactcaaa
213
Q
||||||||||||||| |||||| || ||||||||||||||||| ||||||||||||||||
T
16075527
ggtacctaaaatgttggtgtaaaggctcaatttccttatccaagttggttcatactcaaa
16075468
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 16111177 - 16111136
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
||||||||||||||| ||||||||||||||||||||||||||
T
16111177
tgtaagggtcaattttcttatccaaattggttcatactcaaa
16111136
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 19198065 - 19198137
Alignment:
Q
32
taaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccc
106
Q
||||| || |||| ||||||||||| |||||| || ||||| |||||||||||| |||||||||||||| |||||
T
19198065
taaaattcctaaactaatatccttc-aaaattacttctaaaattacaattcaat-aaaaacccaatttcatcccc
19198137
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0413 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0413
Description:
Target: scaffold0413; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 29 - 248
Target Start/End: Complemental strand, 381 - 163
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||||||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||
T
381
aattaaaactcttaaactaatatccttcaagagtttctactaaagttaaaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaaac
282
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatg
228
Q
|||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
T
281
ttcaaagcataaatcatctcttctttgttacctaaaatgttagtgtaagggtcaatttccttatccaaattgattcatactc-aaagcacaagaacaatg
183
T
Q
229
ccacaaaatagatagtatca
248
Q
||||||||||||||||||||
T
182
ccacaaaatagatagtatca
163
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 34 - 248
Target Start/End: Complemental strand, 40459894 - 40459682
Alignment:
Q
34
aaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaa
133
Q
||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||
T
40459894
aaactcttaaactaatatccttcaaaa-tttctactcaagttacaattcaatcaaaaacccaatttcgtcccctgtacgcacttcaagcaaaaacttcaa
40459796
T
Q
134
aacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccaca
233
Q
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
T
40459795
agcatagatcatctcttctttggtacctaaaatgttagtgcaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatgccaca
40459697
T
Q
234
aaatagatagtatca
248
Q
|||||||||||||||
T
40459696
aaatagatagtatca
40459682
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 29 - 248
Target Start/End: Original strand, 28968494 - 28968714
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaa-tttcgtcccccgtatacacttccagcaaaaa
127
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||| ||||||||
T
28968494
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaatccaaattttgtcccccgtatgcacttcaagcaaaaa
28968593
T
Q
128
cttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaa
226
Q
||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||
T
28968594
cttcaaagcatagaccatcttttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttgatactc-aaagcacaagaaacaa
28968692
T
Q
227
tgccacaaaatagatagtatca
248
Q
| || |||||||||| |||||
T
28968693
tctcataaaatagataatatca
28968714
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 29 - 212
Target Start/End: Complemental strand, 70247 - 70066
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaac
128
Q
|||||||| ||||||| ||||||| ||||||| || || ||||| |||||||||||| |||||| ||||||||||||||||| |||||| |||||||||
T
70247
aattaaaattcttaaactaatatcattcaaaa-ttacttctaaaattacaattcaat-aaaaactcaatttcgtcccccgtacgcacttcaagcaaaaac
70150
T
Q
129
ttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaa
212
Q
|||||| |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
T
70149
ttcaaagcatagaccatctcttctttggtatctaaaatgttagtgtaaggatcaatttccttatccaaattggttcatactcaa
70066
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 87 - 248
Target Start/End: Complemental strand, 55163082 - 55162922
Alignment:
Q
87
aaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaattt
186
Q
||||||||||||| || | ||||| ||||||| || |||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||
T
55163082
aaaaacccaattt-gttcgccgtacacacttcaagtaaaaacttcaaagcatagaccatctcttctttggtgcctaaaatgttagtgtaagggtcaattt
55162984
T
Q
187
ccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatca
248
Q
|||||||||||||||||||||||| ||||||| || ||||||| || |||||||||| |||||
T
55162983
ccttatccaaattggttcatactc-aaagcaccagaaacaatgtcataaaatagataatatca
55162922
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 84 - 212
Target Start/End: Complemental strand, 49499950 - 49499822
Alignment:
Q
84
atcaaaaacccaatttcgtcccccgtatacacttccagc-aaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtca
182
Q
||||||||| |||||| |||||||||| |||||| ||| |||||||||||| |||||| |||||||||||| | |||||||||||||||||||||||||
T
49499950
atcaaaaactcaattt-gtcccccgtacgcacttcaagcgaaaaacttcaaagcatagaccatctcttctttagcacctaaaatgttagtgtaagggtca
49499852
T
Q
183
atttccttatccaaattggttcatactcaa
212
Q
||||||||||||||||| ||||||||||||
T
49499851
atttccttatccaaattagttcatactcaa
49499822
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 247
Target Start/End: Original strand, 2761356 - 2761565
Alignment:
Q
33
aaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttca
132
Q
|||| ||||||| || |||||||||||| || || |||| ||| |||||||| |||||||||||||||||| | ||| | |||| ||||||||| ||
T
2761356
aaaattcttaaactactatccttcaaaa-ttacttctaatattaaaattcaat-aaaaacccaatttcgtcctc-gtacgcgcttcaagcaaaaacacca
2761452
T
Q
133
aaacatagatcatctcttctttggtacctaaaatgttagtgt--aagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgcc
230
Q
|| |||| | ||| ||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||
T
2761453
aagcatacaccatgtcttctttgatacctaaaatattagtgtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaag---aatgcc
2761548
T
Q
231
acaaaatagatagtatc
247
Q
| |||||||||||||||
T
2761549
ataaaatagatagtatc
2761565
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 10276855 - 10276781
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtat
246
Q
||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||||
T
10276855
tgtaagggtcaatttccttatacaaattggttcatactc-aaagcacaagaaacaatgctctaaaatagatagtat
10276781
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 34828064 - 34828169
Alignment:
Q
69
taaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgt
168
Q
|||| |||||||||||||||||| ||||||| |||| ||| | |||| ||||||||| ||||| |||| | ||| |||| |||||||||||||||||
T
34828064
taaaattacaattcaatcaaaaatccaattttatcccta-tatgcgcttcaagcaaaaacatcaaagcatacaccatgtcttttttggtacctaaaatgt
34828162
T
Q
169
tagtgta
175
Q
| |||||
T
34828163
tggtgta
34828169
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 22815622 - 22815774
Alignment:
Q
61
atttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacc
160
Q
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||| |||||||| ||||||||
T
22815622
atttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtacgcacttcaagcaaaaacttcaaatcatagactatctcttcattggtacc
22815721
T
Q
161
taaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
|||||||||| |||||||||||||||| |||||||||||||||||||||||||
T
22815722
taaaatgttaatgtaagggtcaatttcattatccaaattggttcatactcaaa
22815774
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 47 - 213
Target Start/End: Complemental strand, 44437031 - 44436867
Alignment:
Q
47
aatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatc
146
Q
|||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||| |||||| ||||
T
44437031
aatatccttcaaaa-tttcttctaaagttacaattcaatcaaaaacccaattt-gtcccccatacgcacttcaagcaaaaacttcaaagcatagaccatc
44436934
T
Q
147
tcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaa
213
Q
||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
T
44436933
tcttctttggtacctaaaatgttagtgtaagggtcgatttccttatccaaattgattcatactcaaa
44436867
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 6150424 - 6150250
Alignment:
Q
74
ttacaattca-atcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagt
172
Q
|||||||||| |||||||||| ||||| |||| ||||| |||||| ||||||||||||||| |||||| |||||||||||||||| |||||||||||||
T
6150424
ttacaattcagatcaaaaacctaattt-gtcctccgtacgcacttcaagcaaaaacttcaaagcatagaccatctcttctttggtatctaaaatgttagt
6150326
T
Q
173
gtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtatca
248
Q
|||||||||||||||||||||||||||||||||||||||||| ||| || ||||||| || |||||||||| |||||
T
6150325
gtaagggtcaatttccttatccaaattggttcatactcaaaa-caccagaaacaatgtcataaaatagataatatca
6150250
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 40840782 - 40840975
Alignment:
Q
29
aattaaaactcttaaatt-aatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaa
127
Q
|||||||| ||||||| | |||||||||||||| || || | || |||||||||||||||||| ||||||| |||||||| |||||| ||||||||
T
40840782
aattaaaattcttaaaatgaatatccttcaaaa-ttacttttcaaattacaattcaatcaaaaatccaatttgtccccccgtacgcacttcaagcaaaaa
40840880
T
Q
128
cttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaa
223
Q
||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
T
40840881
ctttaaagcatagaccatctcttctttggtacataaaatgttagtgtaagggtcaatttccttatccaaattagttcatactc-aaagcacaagaa
40840975
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 41957762 - 41957933
Alignment:
Q
74
ttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtg
173
Q
||||||||| |||||||| ||||||| |||||| || |||| | ||||||||||||||| |||||| |||||||||||||||||||||||| ||||||
T
41957762
ttacaattcgatcaaaaatccaattta-tcccccatacgcactacaagcaaaaacttcaaagcatagaccatctcttctttggtacctaaaatattagtg
41957860
T
Q
174
taagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
||||||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||||||||||
T
41957861
taagggtcaatttccttatccaaattggttcatactc-aaagca-agaaacaatgtcataaaatagatagtatca
41957933
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 248
Target Start/End: Complemental strand, 35840955 - 35840881
Alignment:
Q
173
gtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtatca
248
Q
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
T
35840955
gtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaatgccacaaaatagatagtatca
35840881
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 12659338 - 12659412
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtat
246
Q
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||
T
12659338
tgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaaacaatgctctaaaatagatagtat
12659412
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 35841096 - 35841029
Alignment:
Q
33
aaaactcttaaattaat-atccttcaaaaatttctactaaagttacaattcaatcaaaaacccaattt
99
Q
|||| |||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||
T
35841096
aaaattcttaaattaattatccttcaaaattttcttctagagttacaattcaatcaaaaacccaattt
35841029
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 243
Target Start/End: Complemental strand, 10251046 - 10250975
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatag
243
Q
|||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||
T
10251046
tgtaagagtcaatttccttatccaaattggttcatact-aaaagcacaagaaacaatgctctaaaatagatag
10250975
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 22640699 - 22640735
Alignment:
Q
32
taaaactcttaaattaatatccttcaaaaatttctac
68
Q
||||||||||||| |||||||||||||||||||||||
T
22640699
taaaactcttaaactaatatccttcaaaaatttctac
22640735
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 169
Target Start/End: Original strand, 21231121 - 21231149
Alignment:
Q
141
atcatctcttctttggtacctaaaatgtt
169
Q
|||||||||||||||||||||||||||||
T
21231121
atcatctcttctttggtacctaaaatgtt
21231149
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 47 - 248
Target Start/End: Original strand, 32624 - 32820
Alignment:
Q
47
aatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatc
146
Q
|||||||||||||| || | ||||| |||||||||||| ||||| ||||||| |||||| || |||||| | |||||||||||| |||||| ||||
T
32624
aatatccttcaaaa-ttacatctaaaattacaattcaattaaaaatccaattt-gtcccctatacgcacttcaacaaaaaacttcaaagcatagaccatc
32721
T
Q
147
tcttctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaagaacaatgccacaaaatagatagtat
246
Q
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
T
32722
tc--ctttggtacctaaaatgttagtgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaacaaagccacaaaatagatagtat
32818
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1838 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1838
Description:
Target: scaffold1838; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 1077 - 958
Alignment:
Q
87
aaaaacccaatttcgtcccccgtatacacttccagcaaaaacttcaaaacatagatcatctcttctttggtacctaaaatgttagtgtaagggtcaattt
186
Q
||||||||||||| |||||||||| ||||||| || |||||||||||| ||| || ||||||||||||||||| |||||| |||||||||||||||||||
T
1077
aaaaacccaattt-gtcccccgtacacacttcaagaaaaaacttcaaagcatggaccatctcttctttggtacttaaaatattagtgtaagggtcaattt
979
T
Q
187
ccttatccaaattggttcata
207
Q
|||||||||||||||||||||
T
978
ccttatccaaattggttcata
958
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0120 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0120
Description:
Target: scaffold0120; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 2122 - 2196
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtat
246
Q
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||
T
2122
tgtaagggtcaatttccttatccaaattggttcatactc-aaagcacaagaaacaatgctctaaaatagatagtat
2196
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 240908 - 240983
Alignment:
Q
29
aattaaaactcttaaattaatatccttcaaaaatttctactaaagttacaattcaatcaaaaacccaatttcgtcccc
106
Q
|||||||| ||||||||||||||||||| |||||| || ||||| |||||||||||| ||||||||||||||||||||
T
240908
aattaaaattcttaaattaatatccttc-aaaattacttctaaaattacaattcaat-aaaaacccaatttcgtcccc
240983
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 242428 - 242496
Alignment:
Q
155
ggtacctaaaatgttagtgtaa-gggtcaatttccttatccaaattggttcatactcaaaagcacaagaa
223
Q
||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||| ||||||||||||
T
242428
ggtacctaaaatgttggtgtaaagggtcaatttccttgttcaaattggttcatactc-aaagcacaagaa
242496
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 246
Target Start/End: Original strand, 356362 - 356436
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcacaag-aacaatgccacaaaatagatagtat
246
Q
||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||||
T
356362
tgtaagggtcaatttccttattcaaattggttcatactc-aaagcacaagaaacaatgctctaaaatagatagtat
356436
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 11504 - 11430
Alignment:
Q
172
tgtaagggtcaatttccttatccaaattggttcatactcaaaagcac-aagaacaatgccacaaaatagatagtat
246
Q
||||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||| ||||||||||||||
T
11504
tgtaaggatcaatttccttatccaaattggttcatactc-aaagcacaaaaaacaatgctctaaaatagatagtat
11430
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
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