View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0084_1D_low_7 (Length: 278)
Name: NF0084_1D_low_7
Description: NF0084_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0084_1D_low_7 |
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| [»] scaffold0130 (1 HSPs) |
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| [»] chr3 (5 HSPs) |
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| [»] chr4 (3 HSPs) |
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| [»] chr7 (5 HSPs) |
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| [»] chr2 (5 HSPs) |
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| [»] chr6 (4 HSPs) |
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| [»] chr8 (4 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] chr5 (2 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] chr1 (3 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0080 (1 HSPs) |
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| [»] scaffold0423 (1 HSPs) |
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| [»] scaffold0019 (1 HSPs) |
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| [»] scaffold0319 (2 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold1611 (1 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0577 (1 HSPs) |
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| [»] scaffold0008 (1 HSPs) |
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| [»] scaffold0507 (1 HSPs) |
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Alignment Details
Target: scaffold0130 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 37884 - 37607
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| ||||| ||||||||| |||||||||||||||||||||| |
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|
| T |
37884 |
gctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacataatccctgaaacaagtgcaacgagataagttatggcccaaaaaac |
37785 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37784 |
catgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaactagaagatcaaa |
37685 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37684 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
37607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 2 - 278
Target Start/End: Complemental strand, 10150069 - 10149793
Alignment:
| Q |
2 |
ctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacc |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10150069 |
ctttagccttttctccgaatttcagtcttccttcatcaagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaacc |
10149970 |
T |
|
| Q |
102 |
atgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaat |
201 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
10149969 |
atgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagcaactagaagatcaaat |
10149870 |
T |
|
| Q |
202 |
atttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10149869 |
atttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcattttttggttcttctacgttttt |
10149793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 13307787 - 13308064
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
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|
| T |
13307787 |
gctttagccttttctccgaatttcaatcttccttcatcgagagctttctgcacagaatccctaaaacgagtgcaacgggataagttatggcccaaaaaac |
13307886 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | ||||||||| |
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| T |
13307887 |
catgaaatttacaaaaaccccttttctttctctgatctagaggagggagtttcatattatccggcactaaaattatgccatcagcaactaaaagatcaaa |
13307986 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13307987 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctgcgttttt |
13308064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 14694138 - 14694415
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||| |
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| T |
14694138 |
gctttagccttttctccgaatttcagtcttccttcatcgagagctttctgcatagaatccctgaaacgagtacaacgggataagttatggcccaaaaaac |
14694237 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| ||||||||||| |||||||||||||| ||||| || | ||||||||||||||||||||||||||||||||||| ||| | |||||| || |
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| T |
14694238 |
catgaaattttcaaaaaccccttttcttcctctgatccagagggggaattttcatattatctggcactaaaattatgccatcagcaactaaaagatcgaa |
14694337 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14694338 |
tatttcttcacacttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
14694415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 28 - 278
Target Start/End: Complemental strand, 10781432 - 10781182
Alignment:
| Q |
28 |
cttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttct |
127 |
Q |
| |
|
|||||| |||||||||| ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || |||| |
|
|
| T |
10781432 |
cttccttcatcgagagctttctgcacagaatccctgaaacgagtacaacgggataagttatggcccaaaaaaccatgaaatttacaaaaacctcttttct |
10781333 |
T |
|
| Q |
128 |
tcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaa |
227 |
Q |
| |
|
||||||| || |||||||| | ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||| | |||||| |||||||| |
|
|
| T |
10781332 |
tcctctggtcaagaggaggaattttcatattatctggcactaaaattatgccatcagcaactaaaagatcaaatatttcttcgcttttagatacatcaaa |
10781233 |
T |
|
| Q |
228 |
agtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
10781232 |
cgtataagtttttgagggatatttataatttttgggctcttctacgttttt |
10781182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 7402898 - 7403081
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
7402898 |
gctttaaccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtacaacgggataagttatggcccaaaaaac |
7402997 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcag |
184 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||| || | |||||||||||||||||| |||||||||||||||| |
|
|
| T |
7402998 |
catgaaatttgcaaaaaccccttttcttcctctgatccagagggggaattttcatattatctggcaccaaaattatgccatcag |
7403081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 3 - 278
Target Start/End: Original strand, 13290281 - 13290556
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||||||||||||| ||||||||| ||||| ||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13290281 |
tttagccttttctccaaatttcagtgttccttcatcgagagccttctacacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaacca |
13290380 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
13290381 |
tgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaactagaagatcaaata |
13290480 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13290481 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
13290556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 278
Target Start/End: Original strand, 14773481 - 14773756
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
14773481 |
tttagccttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaaaacca |
14773580 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
14773581 |
tgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttttctggcactaaaattatgccatcagcaactagaagatcaaata |
14773680 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||| || ||||| ||||||||| |||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
14773681 |
tttcttcacatttggatacatcgaaagtataaattttcgggggatatttatcatttttggattcttctacgttttt |
14773756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 269
Target Start/End: Original strand, 18564752 - 18564982
Alignment:
| Q |
39 |
gagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcctctgatct |
138 |
Q |
| |
|
||||| |||||||||||| |||| ||||||||| ||||| ||||||||||| || ||||| |||| ||||| ||||| || ||||| ||||| || ||| |
|
|
| T |
18564752 |
gagagacttctgcacagaatccctgaaacgagtacaacgagataagttatgtcctaaaaacccatagaatttacaaaatcctctctttttcctttgttct |
18564851 |
T |
|
| Q |
139 |
agaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaaagtataagttt |
238 |
Q |
| |
|
| |||||| | |||||| || | |||||||||||||||||||| || || || ||| || || |||||||||||||| ||||| |||||||| |||| |
|
|
| T |
18564852 |
aaaggaggcaatttcatgttctttggcactaaaattatgccatgagtgactcaaaaatcgaagatctcttcacatttagaaacatcgaaagtatatgttt |
18564951 |
T |
|
| Q |
239 |
ttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
| || |||||||| |||||||| |||||||| |
|
|
| T |
18564952 |
taggaggatatttgtcatttttaggttcttc |
18564982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 18172545 - 18172822
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18172545 |
gctttagccttttctccgaatttcagccttccttcatcgagagccttctgcacagaatccctgaaacaagtgcaacgggataagttatggcccaaaaaac |
18172644 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
18172645 |
catgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaactagaagatcaaa |
18172744 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18172745 |
tatttcttcacatttagacacatcaaaagtataagttttcgggggatacttatcatttttgggttcttctacgttttt |
18172822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 14343568 - 14343845
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
14343568 |
gctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtacaacgggataagttatggcccaaaaaac |
14343667 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| ||||| || | ||||||||||||||||||||||||||||||||||| ||| | ||||||||| |
|
|
| T |
14343668 |
catgaaatttgcaaaaaccctttttcttcctctgatccagagggggaactttcatattatctggcactaaaattatgccatcagcaactaaaagatcaaa |
14343767 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
14343768 |
tatttcttcacatttagacacatcaaaagtataagttttggggggatatttatcatttttgggctcttctacgttttt |
14343845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 18134447 - 18134724
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
|||||||||||||| || |||||||| |||||| |||||||||| ||||||||||| |||| |||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
18134447 |
gctttagccttttccccaaatttcagccttccttcatcgagagctttctgcacagaatccctgaaatgagtacaacgggataagttatggcccaaaaaac |
18134546 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| |||||||| || |||||||||||||| ||||| || | |||||||||||||||||||||||||| |||||||| ||| | ||||||||| |
|
|
| T |
18134547 |
catgaaatttacaaaaacctcttttcttcctctgatccagagggggtattttcatattatctggcactaaaattacgccatcagcaactaaaagatcaaa |
18134646 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
18134647 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttggactcttctacgttttt |
18134724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 3 - 271
Target Start/End: Complemental strand, 15764295 - 15764027
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |||| |||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
15764295 |
tttagacttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgtgtgcaacgggataagttatgtcccaaaaaacca |
15764196 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|| ||||| |||||||| |||||||||||||| || |||| ||| |||||||| || |||||||||| |||||||||||||| ||| ||||||||||| | |
|
|
| T |
15764195 |
tggaatttacaaaaacctctcttcttcctctgttccagagaaggaagtttcatgttgtctggcactagaattatgccatcagtaactagaagatcaaaaa |
15764096 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttcta |
271 |
Q |
| |
|
| |||||||||||||| ||||||||| |||| |||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
15764095 |
tctcttcacatttagatacatcaaaactatatgtttttgggggatacttatcatttttaggttcttcta |
15764027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 9 - 269
Target Start/End: Original strand, 11977840 - 11978100
Alignment:
| Q |
9 |
cttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaat |
108 |
Q |
| |
|
||||||||| |||||||| ||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
11977840 |
cttttctccaaatttcagccttcccttatcgagagccttctgcacagaatccctgaaacgagtacaacgggataagttatgtcccaaaaaaccatggaat |
11977939 |
T |
|
| Q |
109 |
ttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttctt |
208 |
Q |
| |
|
|| |||||||| ||||| ||||| || ||||||||||| |||||||| ||| |||||||| |||||||||||||| ||| ||||||||||| || |||| |
|
|
| T |
11977940 |
ttacaaaaacctctctttttcctttgttctagaggaggaagtttcatgttacttggcactagaattatgccatcagtaactagaagatcaaaaatctctt |
11978039 |
T |
|
| Q |
209 |
cacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||| |
|
|
| T |
11978040 |
cacatttagatacatcaaaagtatatgttttcgggggatatttatcatttttaggttcttc |
11978100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 23201538 - 23201815
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23201538 |
gctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaac |
23201637 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
23201638 |
catgaaattttcaaaaaccccttttcttcctctgatctagaggagggagtttcatattgtccggcactaaaattatgccatcagaaactagaagatcaaa |
23201737 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23201738 |
tatttcttcacatttagacacataaaaagtataagtttttaggggatatttatcatttttgggttcttctacgttttt |
23201815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 23675379 - 23675656
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23675379 |
gctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaac |
23675478 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
23675479 |
catgaaattttcaaaaaccccttttcttcctctgatctagaggagggagtttcatattgtccggcactaaaattatgccatcagaaactagaagatcaaa |
23675578 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23675579 |
tatttcttcacatttagacacataaaaagtataagtttttaggggatatttatcatttttgggttcttctacgttttt |
23675656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 3 - 278
Target Start/End: Complemental strand, 22637598 - 22637323
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
|||||| ||| ||| |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22637598 |
tttagcttttactctgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacggaataagttatggcccaaaaaacca |
22637499 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22637498 |
tgaaatttgcaaaaatcccttttcttcctctgatctagaggagggagtttcatattgtccggcactaaaattatgccatcagaaactagaagatcaaata |
22637399 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22637398 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
22637323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 10 - 271
Target Start/End: Complemental strand, 24911169 - 24910908
Alignment:
| Q |
10 |
ttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatt |
109 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||| ||| |
|
|
| T |
24911169 |
ttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgtgataagttatgtcccaaaaaaccatgatatt |
24911070 |
T |
|
| Q |
110 |
tgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttc |
209 |
Q |
| |
|
| ||||||| |||||||||||||| || |||||||| |||||||| || |||||||||| |||||||||||||| || ||||||||||| || ||||| |
|
|
| T |
24911069 |
tacaaaaacatctcttcttcctctgttccagaggaggaagtttcatgttgtctggcactagaattatgccatcagtcactagaagatcaaaaatctcttc |
24910970 |
T |
|
| Q |
210 |
acatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttcta |
271 |
Q |
| |
|
||||||||| ||||| ||||| || ||||| ||| |||| ||||||||||| ||||| |||| |
|
|
| T |
24910969 |
acatttagatacatcgaaagtgtatgttttcgggtgatacttatcatttttaggttcctcta |
24910908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 269
Target Start/End: Complemental strand, 23816153 - 23815918
Alignment:
| Q |
35 |
catcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcctctg |
134 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||| ||| ||||| |||||||||||||| ||||| ||||| ||||| ||||| || ||||| ||||| || |
|
|
| T |
23816153 |
catcgagagccttatgcacagaatccctgaaacaagtacaacgagataagttatggcctaaaaacccatggaatttacaaaatcctctctttttcctttg |
23816054 |
T |
|
| Q |
135 |
atctagaggagggagtttcat-attatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaaagtata |
233 |
Q |
| |
|
|||| | |||| | |||||| || | ||||| ||||||||||||||||| || | ||||| || || |||||||||||||| ||||| |||||||| |
|
|
| T |
23816053 |
ttctaaatgaggtaatttcatgtttttttggcattaaaattatgccatcagtgactaagagatcgaagatctcttcacatttagaaacatcgaaagtata |
23815954 |
T |
|
| Q |
234 |
agtttttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
||||| | |||||||| || ||||| |||||||| |
|
|
| T |
23815953 |
tgttttaagaggatatttgtcgtttttaggttcttc |
23815918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 19036089 - 19036366
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19036089 |
gctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaac |
19036188 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
19036189 |
catgaaatttgcaaaaaccccttttcttcctctgttctggaggagggagtttcatattttctggcactaaaattatgccatcagcaactagaagatcaaa |
19036288 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
19036289 |
tatttcttcacatttagacacattaaaagtataagtttttgggggatatttatcatttttgggttcttctacattttt |
19036366 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 23434381 - 23434102
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaa- |
99 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
23434381 |
gctttagccttctctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaaaaa |
23434282 |
T |
|
| Q |
100 |
-ccatgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatca |
198 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
23434281 |
accatgaaatttgcaaaaaccccttttcttcctctgatctagaggagggagtttcatattgtccggcactaaaattatgccatcataaactagaagatca |
23434182 |
T |
|
| Q |
199 |
aatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23434181 |
aatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
23434102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 3 - 271
Target Start/End: Original strand, 1552080 - 1552348
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |||| |||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
1552080 |
tttagacttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgtgtgcaacgggataagttatgtcccaaaaaacca |
1552179 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|| ||||| |||||||| |||||||||||||| || |||| ||| |||||||| || |||||||||| |||||||||||||| ||| ||||||||||| | |
|
|
| T |
1552180 |
tggaatttacaaaaacctctcttcttcctctgttccagagaaggaagtttcatgttgtctggcactagaattatgccatcagtaactagaagatcaaaaa |
1552279 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttcta |
271 |
Q |
| |
|
| |||||||||||||| ||||||||| |||| |||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
1552280 |
tctcttcacatttagatacatcaaaactatatgtttttgggggatacttatcatttttaggttcttcta |
1552348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 13772191 - 13772146
Alignment:
| Q |
85 |
ttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcc |
130 |
Q |
| |
|
|||||||| ||| ||||||||||||| |||||||||||||| |||| |
|
|
| T |
13772191 |
ttatggcctaaataaccatgaaatttacaaaaacccctctttttcc |
13772146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 226; Significance: 1e-124; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 17423766 - 17424043
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
17423766 |
gctttagccttttctccgaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtacaacgggataagttatggcccaaaaaac |
17423865 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |
|
|
| T |
17423866 |
catgaaatttacaaaaaccccttttcttcctcagatctagaggagggagtttcatattatctggcactaaaattatgccatcagcaactaaaagatcaaa |
17423965 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
17423966 |
tatttcttcacatttagatacatcaaaagtataagtttttgggggatatttgtcatttttgggctcttctacgttttt |
17424043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 3 - 278
Target Start/End: Original strand, 22349678 - 22349953
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22349678 |
tttagccttttctcctaattttagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaacca |
22349777 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| | ||||||||| |||||||| || ||||||||||||||||||||||||| ||| || |||||||||| |
|
|
| T |
22349778 |
tgaaatttacaaaaacctctcttcttcctctgttttagaggaggaagtttcatgttttctggcactaaaattatgccatcagcaactaggagatcaaata |
22349877 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
22349878 |
tttcttcacatttagatacatcaaaagtataagtttttgggggatatttatcatttttggactcttctacgttttt |
22349953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 63 - 271
Target Start/End: Complemental strand, 22066981 - 22066773
Alignment:
| Q |
63 |
gaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatct |
162 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||||||||| ||||| |||||||| ||||| |||||||| ||||||||||| |||||||| ||| | |
|
|
| T |
22066981 |
gaaacgagtacaacgggataagttatgtcctaaaaaaccatggaatttacaaaaacctctctttttcctctgctctagaggaggaagtttcatgttactt |
22066882 |
T |
|
| Q |
163 |
ggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgg |
262 |
Q |
| |
|
||||||| |||||||||||||| ||| ||||||||||| || |||||||||||||| |||||||||||||| ||| | |||||||||||||||||||| | |
|
|
| T |
22066881 |
ggcactagaattatgccatcagtaactagaagatcaaaaatctcttcacatttagatacatcaaaagtatatgttatcgggggatatttatcatttttag |
22066782 |
T |
|
| Q |
263 |
gttcttcta |
271 |
Q |
| |
|
||||||||| |
|
|
| T |
22066781 |
gttcttcta |
22066773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 269
Target Start/End: Complemental strand, 15913385 - 15913151
Alignment:
| Q |
35 |
catcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcctctg |
134 |
Q |
| |
|
|||||||||| |||| |||||| ||| |||||||| ||||| || || |||||||| || |||||||||||||| ||||| || ||||| ||||| || |
|
|
| T |
15913385 |
catcgagagctttctacacagaatcctttaaacgagtacaacgagacaaattatggcctaagaaaccatgaaatttacaaaatcctctctttttcctttg |
15913286 |
T |
|
| Q |
135 |
atctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaaagtataa |
234 |
Q |
| |
|
|||| |||||| | || | ||| | || ||||| ||||||||||||| ||||| ||||||||| ||||| || || ||||| |||||||| |||| |
|
|
| T |
15913285 |
ctctaaaggaggcaactttagatttttaggaactaatattatgccatcagcaaccaaaagatcaaagatttcctcgcacttagaaacatcaaagatatat |
15913186 |
T |
|
| Q |
235 |
gtttttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
||||| || || ||||| ||||| || |||||||| |
|
|
| T |
15913185 |
gttttaggagggtatttgtcattctttggttcttc |
15913151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 28953 - 28676
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
28953 |
gctttagccttttctccgaatttcagtcttccttcatcgagagccttcaagacagaatccctgaaacgagtgcaacaggataaattatggcccaaaaaac |
28854 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| ||||||||||| |
|
|
| T |
28853 |
catgaaatttgcaaaaaccccttttcttcttctgatctagaggagggagttttatattatctggcactaagattatgccatcagcaactagaagatcaaa |
28754 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28753 |
tatctcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
28676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 25490 - 25213
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| ||||| |||| ||||||||||||||||||| ||||||| |
|
|
| T |
25490 |
gctttagccttttctccgaatttcaatcttccttcatcgagagccttctgcacagaatccctgaaactagtgtaacgggataagttatggcctaaaaaac |
25391 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
25390 |
catgaaatttacaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaagattatgccatcagaaactagaagatcaaa |
25291 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
25290 |
tatttcttcgcatttagacacttcaaaagtttaagtttttgggggatatttatcgtttttgggttcctctacgttttt |
25213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 38505 - 38782
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
38505 |
gctttagccttttctccgaatttcaatcttccttcatcgagagtcttctgcacagaatccctgaaacgagtgcaacgggataagttatggcctaaaaaac |
38604 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
38605 |
catgaaatttacaaaaaaaccttttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaactagaagatcaaa |
38704 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
38705 |
tatttcttcgcatttagacacgtcaaaagtgtaagtttttgggggatatttatcgtttttgggttcctctacgttttt |
38782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 21510272 - 21509995
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21510272 |
gctttagccttttctccgaattttagtcttccttcatcgagagccttctgcatagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaac |
21510173 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
21510172 |
catgaaatttacaaaaacctctcttcttcctctgttctagaggagggagtttcatgttttctggcactaaaattatgccatcagctactagaagatcaaa |
21510073 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
21510072 |
tatttcttcacatttagatacatcaaaggtataagtttttgggggatatttatcatttttgggctcttctacgttttt |
21509995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 26271951 - 26272033
Alignment:
| Q |
195 |
atcaaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
26271951 |
atcaaatatttcttcacatttagatacatcaaaagtataagtttttgggggatatttatc-tttttgggctcttctacgttttt |
26272033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 278
Target Start/End: Complemental strand, 10754 - 10479
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10754 |
tttagccttttctccgaattttagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaacca |
10655 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
10654 |
tgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttttctggcactaaaattatgccatcagcaactagaagatcaaata |
10555 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
10554 |
tttcttcacacttagatacatcaaaagtataagtttttgggggatatttatcatttttggactcttctacattttt |
10479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 44 - 278
Target Start/End: Complemental strand, 16635 - 16401
Alignment:
| Q |
44 |
ccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcctctgatctagagg |
143 |
Q |
| |
|
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16635 |
ccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaaccccttttcttcctctgatctagagg |
16536 |
T |
|
| Q |
144 |
agggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttggg |
243 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16535 |
agggagtttcatattatcagacactaaaattatgccatcagaaactagaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttggg |
16436 |
T |
|
| Q |
244 |
ggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| |
|
|
| T |
16435 |
ggatatttatcatgtttgggttcttctacgttttt |
16401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 278
Target Start/End: Complemental strand, 66249 - 65974
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
66249 |
tttagccttttctccaaatttcagtcttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaaaacca |
66150 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
66149 |
tgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttttctggcactaaaattatgccatcagcaactagaagatcaaata |
66050 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||| || ||||| ||||||||| |||| |||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
66049 |
tttcttcacatttggatacatcgaaagtataaattttcgggggatatttatcatttttagattcttctacgttttt |
65974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 278
Target Start/End: Original strand, 22806751 - 22807026
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||||||||||||| ||||||||||| ||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22806751 |
tttagccttttctccaaatttcagtctgccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaaaacca |
22806850 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
22806851 |
tgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttttctggcactaaaattatgccatcagcaactagaagatcaaata |
22806950 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||| || ||||| |||||||||||||| |||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
22806951 |
tttcttcacatttggatacatcgaaagtataagttttcgggggatatttatcatttttagattcttctacgttttt |
22807026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 41381235 - 41381512
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||| |||| |||||| |||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
41381235 |
gctttagccttttctccgaatttcagccttccttcatcgagagctttctacacagaatcccttaaacgagtacaacgggataagttatggcccaaaaaac |
41381334 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaa |
200 |
Q |
| |
|
|||||||||| |||||||| || ||||||||||| || ||||| || | |||||||||||||||||||||||||||||||| || ||| | ||||||||| |
|
|
| T |
41381335 |
catgaaatttacaaaaacctcttttcttcctctggtccagagggggaattttcatattatctggcactaaaattatgccattagcaactaaaagatcaaa |
41381434 |
T |
|
| Q |
201 |
tatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
41381435 |
tatttcttcgcatttagatacatcaaaagtataagtttttgggggatatttatcgtttttgggctcttctacattttt |
41381512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 269
Target Start/End: Original strand, 21166069 - 21166328
Alignment:
| Q |
10 |
ttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatt |
109 |
Q |
| |
|
|||||||| || |||| ||||| ||||||||||||| || ||||| |||| ||||||||| ||| | ||||| ||||| || |||| ||||||||||| |
|
|
| T |
21166069 |
ttttctccaaacttcaaccttccctcatcgagagccttatgtacagaatccctgaaacgagtacaaagagataaattatgccctaaaacaccatgaaatt |
21166168 |
T |
|
| Q |
110 |
tgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttc |
209 |
Q |
| |
|
|||| || || ||||| ||||| | || | |||||| ||||||||||| |||||||||| |||||||||||||| || | |||||| || || ||||| |
|
|
| T |
21166169 |
tgcagaatcctctctttttccttcgttcaaaaggaggcagtttcatattctctggcactagaattatgccatcagtgactaaaagatcgaagatctcttc |
21166268 |
T |
|
| Q |
210 |
acatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
||||||||| |||||||| ||||| ||||| || |||||||| |||||||| |||||||| |
|
|
| T |
21166269 |
acatttagaaacatcaaaggtatatgttttcggaggatatttgtcatttttaggttcttc |
21166328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 3 - 278
Target Start/End: Original strand, 127633 - 127911
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaac----gggataagttatggcccaaaaa |
98 |
Q |
| |
|
||||||||||||||||||||||| ||||||| |||||||||||||||||||| | |||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
127633 |
tttagccttttctccgaatttcaatcttccttcatcgagagccttctgcacataatcccttaaacgagtgcaacatacgggataagttatggcccaaaaa |
127732 |
T |
|
| Q |
99 |
accatgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatca |
198 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
127733 |
accatgaaatttgcaaaaacctctcttcttcctctgttctagaggagggagtttcatgttttctggcactaaaattatgccatcagcaactagaagatca |
127832 |
T |
|
| Q |
199 |
aatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
127833 |
aatatttcttcacatttagatacatcaaaagtataagtttttgggggata-ttatcatttttggactcttctacgttttt |
127911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 188; Significance: 1e-102; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 35 - 278
Target Start/End: Complemental strand, 64580 - 64337
Alignment:
| Q |
35 |
catcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcctctg |
134 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
64580 |
catcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttacaaaaacctctcttcttcctctg |
64481 |
T |
|
| Q |
135 |
atctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaaagtataa |
234 |
Q |
| |
|
| ||||||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
64480 |
ttatagaggaggaagtttcatgttttctggcactaaaattatgccatcagaaactagaagatcaaatatttcttcacatttagatacatcaaaagtataa |
64381 |
T |
|
| Q |
235 |
gtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
64380 |
gtttttgggggatatttatcatttttgaactcttctacgttttt |
64337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 35 - 278
Target Start/End: Complemental strand, 73758 - 73515
Alignment:
| Q |
35 |
catcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcctctg |
134 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
73758 |
catcgagagccttctgcacagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttacaaaaacctctcttcttcctctg |
73659 |
T |
|
| Q |
135 |
atctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaaagtataa |
234 |
Q |
| |
|
| ||||||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
73658 |
ttatagaggaggaagtttcatgttttctggcactaaaattatgccatcagaaactagaagatcaaatatttcttcacatttagatacatcaaaagtataa |
73559 |
T |
|
| Q |
235 |
gtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
73558 |
gtttttgggggatatttatcatttttgaactcttctacgttttt |
73515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 278
Target Start/End: Original strand, 139876 - 140151
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
139876 |
tttagccttttctccgaatttcagtcttccttcgtcgagagccttctgcacagaatccctgaaacgagtgcaacgggaaaagttatgtcccaaaaaacca |
139975 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| || |||||||| |||||||| || ||||||||||||||||||||||||| || ||||||||||| | |
|
|
| T |
139976 |
tgaaatttacaaaaacctctcttcttcctctattccagaggaggaagtttcatgttgtctggcactaaaattatgccatcagcgactagaagatcaaaaa |
140075 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
|||||||||||||||| ||||| ||||| || ||||| |||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
140076 |
tttcttcacatttagatacatcgaaagtgtacgttttcgggggatatttatcatttttggattcttctacgttttt |
140151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 3 - 278
Target Start/End: Original strand, 6452 - 6727
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||||||||||||| ||||||||| | ||| ||||||||||||||| || ||| |||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
6452 |
tttagccttttctccaaatttcagtttgccttcatcgagagccttctccaaagaatccctaaaacgagtgcaacgggataagttatgtcccaaaaaacca |
6551 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| ||||||||||| |||||||| || |||||||||||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
6552 |
tgaaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatcttttctggcactaaaatcatgccatcagcaactagaagatcaaata |
6651 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttctacgttttt |
278 |
Q |
| |
|
||||||||||||| || ||||| |||||||||||||| ||||||||||||||| |||| | ||||||||||||||| |
|
|
| T |
6652 |
tttcttcacatttggatacatcgaaagtataagttttcgggggatatttatcaattttagattcttctacgttttt |
6727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 165; Significance: 3e-88; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 3 - 271
Target Start/End: Complemental strand, 4322 - 4054
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4322 |
tttagacttttctccaaatttcagtcttccttcatcgagagccttttgcacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaaaacca |
4223 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|||||||| |||||| | |||||||||||||| || |||||||| |||||||| || ||| |||||| |||||||||||||| ||| ||||||||||| | |
|
|
| T |
4222 |
tgaaatttacaaaaatctctcttcttcctctgttccagaggaggaagtttcatgttgtctagcactagaattatgccatcagtaactagaagatcaaaaa |
4123 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttcta |
271 |
Q |
| |
|
| |||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||||| |
|
|
| T |
4122 |
tctcttcacatttagatacatcaaaagtatatgttttcgggggatacttatcatttttaggttcttcta |
4054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0080 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold0080
Description:
Target: scaffold0080; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 69 - 278
Target Start/End: Complemental strand, 4788 - 4579
Alignment:
| Q |
69 |
agtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcact |
168 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||| |
|
|
| T |
4788 |
agtgcaacaggataagttatggcccaaaaaaccatgaaatttacaaaaaccccttttcttcctctgttctagaggagggagtttcatattttccggcact |
4689 |
T |
|
| Q |
169 |
aaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttctt |
268 |
Q |
| |
|
|| ||| ||||||| | ||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
4688 |
aacattttgccatcggtaactagaagatcaaatatctcttcacacttagatacatcaaaagtataagtttttgggggatatttaacatttttggattctt |
4589 |
T |
|
| Q |
269 |
ctacgttttt |
278 |
Q |
| |
|
|||||||||| |
|
|
| T |
4588 |
ctacgttttt |
4579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0423 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0423
Description:
Target: scaffold0423; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 271
Target Start/End: Complemental strand, 4383 - 4115
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||| ||||||||| |||||||| |||||| |||||||| |||||| |||||| |||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4383 |
tttagacttttctccaaatttcagccttccttcatcgagatccttctacacagaatccctgaaacgagtgcaacgggataagttatgtcccaaaaaacca |
4284 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|| ||||| |||||||| |||||||||||||| ||||||||||| |||||||| || |||||||| |||||||||||||| ||| ||||||||||| | |
|
|
| T |
4283 |
tggaatttacaaaaacctctcttcttcctctgttctagaggaggaagtttcatgttgcttggcactagaattatgccatcagtaactagaagatcaaaaa |
4184 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttcta |
271 |
Q |
| |
|
| ||||| |||||||| ||||||||||| || ||||| ||||||||| ||||||| || |||||||||| |
|
|
| T |
4183 |
tctcttcgcatttagatacatcaaaagtgtatgttttcgggggatatgtatcattcttaggttcttcta |
4115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 3 - 268
Target Start/End: Original strand, 159979 - 160245
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaa-aacc |
101 |
Q |
| |
|
||||| ||||||||| ||||||||||||||| |||||||||||||||||||| | |||| || ||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
159979 |
tttagacttttctccaaatttcagtcttccttcatcgagagccttctgcacaaaatccctaaatcgagtgcaacgggataagttatgtcccaaaaaaacc |
160078 |
T |
|
| Q |
102 |
atgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaat |
201 |
Q |
| |
|
||| ||||| |||||||| |||||||||||||| || |||||||| |||||||| | | |||||||| |||||||||||||| ||| ||||||||||| |
|
|
| T |
160079 |
atggaatttacaaaaacctctcttcttcctctgttccagaggaggaagtttcatgctgtttggcactagaattatgccatcagtaactagaagatcaaaa |
160178 |
T |
|
| Q |
202 |
atttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttctt |
268 |
Q |
| |
|
|| |||||||||||||| ||| ||||||| || ||||| |||||||||||||||||||| ||||||| |
|
|
| T |
160179 |
atctcttcacatttagatacagcaaaagtgtatgttttcgggggatatttatcatttttaggttctt |
160245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 134; Significance: 8e-70; HSPs: 2)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 10939 - 10770
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||| ||||| |||| ||||||||||||||||||| ||||||| |
|
|
| T |
10939 |
gctttagccttttctccgaatttcaatcttccttcatcgagagccttctgcacagaatccctgaaacaagtgtaacgggataagttatggcctaaaaaac |
10840 |
T |
|
| Q |
101 |
catgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaa |
170 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10839 |
catgaaatttacaaaaaccccttttcttcctctgatctagaggagggagtttcatattatctggcactaa |
10770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 8922 - 8807
Alignment:
| Q |
1 |
gctttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaac |
100 |
Q |
| |
|
||||||||||||||||||||||||| |||| || |||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8922 |
gctttagccttttctccgaatttcaatctttcttcatcgagagccttctgcatagaatccctgaaacgagtgcaacgggataagttatggcccaaaaaac |
8823 |
T |
|
| Q |
101 |
catgaaatttgcaaaa |
116 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
8822 |
catgaaatttacaaaa |
8807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 257
Target Start/End: Original strand, 43193 - 43447
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||| |||||||| |||||||| ||||| |||||||||||||||||||||| | | ||||||||| ||| ||||||||||||| || || |||||| |
|
|
| T |
43193 |
tttagtcttttctctgaatttcatccttccctcatcgagagccttctgcacagaattcttgaaacgagtacaatgggataagttatgtcctaagaaacca |
43292 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|| ||||| |||||||| ||||| |||||||| ||||||||||| |||||||| ||| |||||||| |||||||||||||| ||| ||||||||||| | |
|
|
| T |
43293 |
tggaatttacaaaaacctctctttttcctctgctctagaggaggaagtttcatgttacttggcactagaattatgccatcagtaactagaagatcaaaaa |
43392 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatt |
257 |
Q |
| |
|
| ||||| |||||||| | ||||||||| || |||||||| |||||||||||||| |
|
|
| T |
43393 |
tctcttcgcatttagataaatcaaaagtgtatgtttttggaggatatttatcatt |
43447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 4 - 225
Target Start/End: Complemental strand, 13719 - 13498
Alignment:
| Q |
4 |
ttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccat |
103 |
Q |
| |
|
|||| ||||||||| |||||||| ||||| ||||||||||||||||||| | |||| |||||||| || |||||||||||||| ||||||||||||| |
|
|
| T |
13719 |
ttagacttttctccaaatttcagccttccctcatcgagagccttctgcaccaaatccctaaaacgagtacatcgggataagttatgtcccaaaaaaccat |
13620 |
T |
|
| Q |
104 |
gaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatat |
203 |
Q |
| |
|
||||||| |||||||| ||||| |||||||| |||||||| || |||||||| ||| ||||||||||||||||||||| | ||| ||||||||||| || |
|
|
| T |
13619 |
gaaatttacaaaaacctctctttttcctctgctctagagggggaagtttcatgttacttggcactaaaattatgccatcggtaactagaagatcaaaaat |
13520 |
T |
|
| Q |
204 |
ttcttcacatttagacacatca |
225 |
Q |
| |
|
||||||||||||||| |||||| |
|
|
| T |
13519 |
ttcttcacatttagatacatca |
13498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 3 - 270
Target Start/End: Complemental strand, 148112 - 147845
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||| |||||||||||| |||| ||||| || ||||||||||||||||||||||| ||||||||| ||||||||||||||||| | || |||||| |
|
|
| T |
148112 |
tttagtcttttctccgaacttcaaccttcccttattgagagccttctgcacagagtccctgaaacgagtacaacgggataagttatgctctaagaaacca |
148013 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaata |
202 |
Q |
| |
|
|| ||||| |||||||| ||||| ||||| || || | |||||||||||||||||| | |||||| | |||||||||||||| ||| ||||||||||| | |
|
|
| T |
148012 |
tggaattttcaaaaacctctctttttcctttgttccaaaggagggagtttcatattttttggcaccagaattatgccatcagtaactagaagatcaaaga |
147913 |
T |
|
| Q |
203 |
tttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttct |
270 |
Q |
| |
|
| ||||| |||||||| ||||| ||||| || ||||| || |||||||| ||||| || ||||||||| |
|
|
| T |
147912 |
tctcttcgcatttagaaacatcgaaagtgtatgttttaggaggatatttgtcattctttggttcttct |
147845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 3 - 269
Target Start/End: Complemental strand, 147073 - 146806
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||| |||||||||||| |||| ||||| ||| ||||||||||||||||||||||| ||||||||| |||||||||| |||||| || || |||||| |
|
|
| T |
147073 |
tttagtcttttctccgaacttcaaccttccctcattgagagccttctgcacagagtccctgaaacgagtacaacgggatacgttatgccctaagaaacca |
146974 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctc-ttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaat |
201 |
Q |
| |
|
|||||||| |||||||| ||| || ||||| || || | ||||||||| ||||||| | |||||| | |||||||||||||| ||| ||||||||||| |
|
|
| T |
146973 |
tgaaatttacaaaaacctctcttttttcctttgttccaaaggagggagaatcatattttttggcaccagaattatgccatcagtaactagaagatcaaag |
146874 |
T |
|
| Q |
202 |
atttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
|| ||||| |||||||| ||||||||||| || ||||| || |||||||| ||||| || |||||||| |
|
|
| T |
146873 |
atctcttcgcatttagaaacatcaaaagtgtatgttttaggaggatatttgtcattctttggttcttc |
146806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 269
Target Start/End: Complemental strand, 83062 - 82795
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||| |||||||||||| |||| ||||| ||| ||||||||||||||||||||||| ||||||||| ||||| |||| |||||| || || |||||| |
|
|
| T |
83062 |
tttagtcttttctccgaacttcaaccttccctcattgagagccttctgcacagagtccctgaaacgagtacaacgagatacgttatgccctaagaaacca |
82963 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctc-ttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaat |
201 |
Q |
| |
|
|| ||||| |||||||| ||| || ||||| || |||| ||||||||| ||||||| | | |||| | |||||||||||||| ||| ||||||| ||| |
|
|
| T |
82962 |
tggaatttacaaaaacctctcttttttcctttgctctaaaggagggagaatcatatttttttgcaccagaattatgccatcagtaactagaagatgaaag |
82863 |
T |
|
| Q |
202 |
atttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
|| ||||| |||||||| ||||| || || || ||||| || |||||||| ||||| || |||||||| |
|
|
| T |
82862 |
atctcttcgcatttagaaacatctaaggtgtatgttttaggaggatatttgtcattctttggttcttc |
82795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 269
Target Start/End: Complemental strand, 120734 - 120467
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaacca |
102 |
Q |
| |
|
||||| |||||||||||| |||| ||||| || ||||||||||||||||||||||| ||||||||| ||||| |||| |||||| || || |||||| |
|
|
| T |
120734 |
tttagtcttttctccgaacttcaaccttcccttattgagagccttctgcacagagtccctgaaacgagtacaacgagatacgttatgccctaagaaacca |
120635 |
T |
|
| Q |
103 |
tgaaatttgcaaaaacccctc-ttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaat |
201 |
Q |
| |
|
|| ||||| |||||||| ||| || ||||| || |||| ||||||||| ||||||| | | |||| | |||||||||||||| ||| ||||||| ||| |
|
|
| T |
120634 |
tggaatttacaaaaacctctcttttttcctttgctctaaaggagggagaatcatatttttttgcaccagaattatgccatcagtaactagaagatgaaag |
120535 |
T |
|
| Q |
202 |
atttcttcacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
|| ||||| |||||||| ||||| || || || ||||| || |||||||| ||||| || |||||||| |
|
|
| T |
120534 |
atctcttcgcatttagaaacatctaaggtgtatgttttaggaggatatttgtcattctttggttcttc |
120467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 270
Target Start/End: Original strand, 180225 - 180484
Alignment:
| Q |
9 |
cttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaat |
108 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||||||| |||||||||| |||| ||||||||| ||||||||||||||||| || || |||||||||||| |
|
|
| T |
180225 |
cttttctccgaacttcaaccttccctcatcgagagccctctgcacagaatccctgaaacgagtacaacgggataagttatgccctaagaaaccatgaaat |
180324 |
T |
|
| Q |
109 |
ttgcaaaaacccctcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttctt |
208 |
Q |
| |
|
|| |||||||| ||||| ||| || || | |||||||||||||||| | | |||||| | ||||||| |||||| ||| ||||||||||| || |||| |
|
|
| T |
180325 |
ttacaaaaacctctctt--tccgttgttccaaaggagggagtttcataatttttggcaccagaattatgtcatcagtaactagaagatcaaagatctctt |
180422 |
T |
|
| Q |
209 |
cacatttagacacatcaaaagtataagtttttgggggatatttatcatttttgggttcttct |
270 |
Q |
| |
|
| |||||||| ||||| ||||| || ||||| || |||||||| ||||| || ||||||||| |
|
|
| T |
180423 |
cgcatttagaaacatcgaaagtgtatgttttaggaggatatttgtcattctttggttcttct |
180484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 269
Target Start/End: Original strand, 68606 - 68847
Alignment:
| Q |
28 |
cttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttct |
127 |
Q |
| |
|
|||||| ||||||||||||||| | ||| |||| |||||| | ||||| ||||||||||| | || |||||||||||||| || || || ||||| | |
|
|
| T |
68606 |
cttccttcatcgagagccttctatatagattccctaaaacgattacaacgagataagttatgccttaagaaaccatgaaatttacagaatcctctctttt |
68705 |
T |
|
| Q |
128 |
tcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaa |
227 |
Q |
| |
|
||| || || | ||||| ||||||||||| | |||||| | |||||||||||||| || | |||||| || || |||||||||||||| ||||| || |
|
|
| T |
68706 |
tccattgttcaaacggaggtagtttcatattttttggcaccagaattatgccatcagtgactaaaagatcgaagatctcttcacatttagaaacatcgaa |
68805 |
T |
|
| Q |
228 |
agtataagtttttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
|||||| ||||| || | |||||| |||||||| |||||||| |
|
|
| T |
68806 |
agtatatgttttaggagaatatttgtcatttttaggttcttc |
68847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1611 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1611
Description:
Target: scaffold1611; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 269
Target Start/End: Original strand, 706 - 953
Alignment:
| Q |
22 |
ttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccc |
121 |
Q |
| |
|
||||| ||||| |||| ||||| ||||||||| | |||| |||| |||| ||||| |||||||||||||| ||||| ||||| ||||| ||||| || | |
|
|
| T |
706 |
ttcagccttccctcatcaagagctttctgcacataatccctgaaaggagtacaacgagataagttatggcctaaaaacccatggaatttacaaaatcctc |
805 |
T |
|
| Q |
122 |
tcttcttcctctgatctagaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacac |
221 |
Q |
| |
|
|||| ||||| || |||| |||||| ||||||| || | |||| |||| ||| |||||||| || | |||||| || || |||||||||||||| || |
|
|
| T |
806 |
tctttttcctttgctctaaaggaggcggtttcatgttgtttggccgtaaagttacgccatcagtgactaaaagatcgaagatctcttcacatttagaaac |
905 |
T |
|
| Q |
222 |
atcaaaagtataagtttttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
||| | || ||| ||||| || |||||||| || |||| |||||||| |
|
|
| T |
906 |
atcgagagaatatgttttaggaggatatttgtcgatttttggttcttc |
953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 32865 - 32786
Alignment:
| Q |
3 |
tttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggata |
82 |
Q |
| |
|
||||| ||||||||| |||||||| |||||| |||||||||||||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
32865 |
tttagacttttctccaaatttcagccttccttcatcgagagccttctgcacagaatccctgaaacgagtgcaacgggata |
32786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0577 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0577
Description:
Target: scaffold0577; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 6580 - 6665
Alignment:
| Q |
4 |
ttagccttttctccgaatttcagtcttcctgcatcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatg |
89 |
Q |
| |
|
||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||| |
|
|
| T |
6580 |
ttagccttttctccgaacttcaaccttccctcatcgagagccttctgcacagagtccctgaaacgagtacaatggggtaagttatg |
6665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 269
Target Start/End: Original strand, 134533 - 134763
Alignment:
| Q |
39 |
gagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaaaccatgaaatttgcaaaaacccctcttcttcctctgatct |
138 |
Q |
| |
|
||||||||||| || ||| ||| ||| ||||| ||||| ||||||||||| ||||| ||||| |||| ||||| || ||||| ||||| || ||| |
|
|
| T |
134533 |
gagagccttctacatagattccgtgaaccgagtacaacgagataagttatgttttaaaaacccatggtatttacaaaatcctctctttttcctttgttct |
134632 |
T |
|
| Q |
139 |
agaggagggagtttcatattatctggcactaaaattatgccatcagaaaccagaagatcaaatatttcttcacatttagacacatcaaaagtataagttt |
238 |
Q |
| |
|
| |||||| | |||||| || | |||||| ||||||||| | | || || || ||||| || || |||||||||||||| ||||| |||||||| |||| |
|
|
| T |
134633 |
aaaggaggcaatttcatgttctttggcacaaaaattatgtcgttagtgactaggagatcgaagatctcttcacatttagaaacatcgaaagtatatgttt |
134732 |
T |
|
| Q |
239 |
ttgggggatatttatcatttttgggttcttc |
269 |
Q |
| |
|
| || |||||||| |||||||| ||||||| |
|
|
| T |
134733 |
taggaggatatttgtcatttttaagttcttc |
134763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0507 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0507
Description:
Target: scaffold0507; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 98
Target Start/End: Original strand, 11801 - 11864
Alignment:
| Q |
35 |
catcgagagccttctgcacagagtcccggaaacgagtgcaacgggataagttatggcccaaaaa |
98 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
11801 |
catcgagagccttctgcacagaatccctgaaacgagtacaacgagataagttatggcctaaaaa |
11864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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