View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0084_2D_high_17 (Length: 337)
Name: NF0084_2D_high_17
Description: NF0084_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0084_2D_high_17
Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 79 - 322
Target Start/End: Complemental strand, 40757604 - 40757361
Alignment:
Q
79
tatagagtatagatgtttgaaaattttaaattatataacaaactcaacaaacccatatgtattcaacatcataatcatattcatactctattgagttact
178
Q
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
40757604
tatagaatatagatgtttgaaaattttaaattatataacaaactcaacaaacccatatgtattcaacatcataatcatattcatactctattgagttact
40757505
T
Q
179
tcaaattcacaccaactcattatcagtcttgttgtaaacacaaagggatctattttagaggtgtttgtttcacctaggaaaaataccaccggcttatatt
278
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
40757504
tcaaattcacaccaactcattatcagtcttgttgtaaacacaaagggatctattttagaggtgtttgtttcacctaggaaaaataccaccggcttatatt
40757405
T
Q
279
atgtcacaagatctaggttctctcatttcaccttatatgatgtc
322
Q
||||||||||||| |||||||||||||||||||||||| |||||
T
40757404
atgtcacaagatccaggttctctcatttcaccttatattatgtc
40757361
T
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