View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0084_2D_low_1 (Length: 2191)

Name: NF0084_2D_low_1
Description: NF0084_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0084_2D_low_1
NF0084_2D_low_1
[»] chr5 (38 HSPs)
chr5 (1004-2174)||(38814608-38815781)
chr5 (1-1008)||(38815928-38816928)
chr5 (1731-2011)||(38821252-38821537)
chr5 (419-568)||(38821782-38821928)
chr5 (2080-2174)||(38821066-38821160)
chr5 (132-207)||(19820428-19820503)
chr5 (158-287)||(22423764-22423895)
chr5 (132-199)||(22013364-22013431)
chr5 (132-206)||(42469171-42469245)
chr5 (157-206)||(15410483-15410532)
chr5 (154-206)||(6326332-6326384)
chr5 (130-255)||(37328829-37328955)
chr5 (171-255)||(3966492-3966577)
chr5 (147-205)||(15382442-15382500)
chr5 (171-204)||(6035472-6035505)
chr5 (240-289)||(8420075-8420124)
chr5 (154-207)||(21191090-21191143)
chr5 (235-287)||(9929668-9929720)
chr5 (171-207)||(17123037-17123073)
chr5 (154-198)||(21522722-21522766)
chr5 (154-198)||(21533288-21533332)
chr5 (171-207)||(27144452-27144488)
chr5 (132-207)||(6247572-6247647)
chr5 (171-255)||(11685928-11686012)
chr5 (164-207)||(14674251-14674294)
chr5 (164-207)||(19579683-19579726)
chr5 (147-206)||(21137654-21137713)
chr5 (164-207)||(34879332-34879375)
chr5 (164-206)||(5873548-5873590)
chr5 (259-289)||(24906250-24906280)
chr5 (176-206)||(27932229-27932259)
chr5 (173-207)||(28588708-28588742)
chr5 (310-348)||(35665559-35665597)
chr5 (154-200)||(36642803-36642849)
chr5 (158-207)||(19552577-19552626)
chr5 (132-205)||(30135264-30135336)
chr5 (180-209)||(32766975-32767004)
chr5 (805-854)||(38821542-38821591)
[»] chr7 (36 HSPs)
chr7 (132-206)||(27944991-27945065)
chr7 (132-206)||(24105629-24105702)
chr7 (175-257)||(29787354-29787435)
chr7 (154-207)||(11722132-11722185)
chr7 (145-255)||(24339605-24339716)
chr7 (157-238)||(19206025-19206107)
chr7 (171-255)||(32308109-32308194)
chr7 (177-287)||(11700798-11700909)
chr7 (147-207)||(1433419-1433479)
chr7 (127-287)||(7328639-7328805)
chr7 (132-203)||(2034392-2034462)
chr7 (156-207)||(2425767-2425818)
chr7 (132-207)||(43027503-43027578)
chr7 (147-206)||(43249958-43250017)
chr7 (165-207)||(8046061-8046103)
chr7 (171-238)||(22484014-22484082)
chr7 (165-207)||(23191879-23191921)
chr7 (157-207)||(26733279-26733329)
chr7 (176-250)||(30731031-30731104)
chr7 (174-247)||(11072290-11072362)
chr7 (1043-1140)||(39079876-39079973)
chr7 (156-205)||(49107795-49107844)
chr7 (171-207)||(20549780-20549816)
chr7 (168-207)||(2948669-2948708)
chr7 (171-255)||(6630897-6630982)
chr7 (164-207)||(21828439-21828482)
chr7 (175-206)||(28155563-28155594)
chr7 (133-207)||(598160-598233)
chr7 (156-206)||(5235960-5236010)
chr7 (189-255)||(9933282-9933347)
chr7 (165-207)||(20545270-20545312)
chr7 (147-205)||(26329418-26329476)
chr7 (156-205)||(4017830-4017879)
chr7 (259-288)||(17852091-17852120)
chr7 (1035-1092)||(21048692-21048749)
chr7 (171-204)||(25791642-25791675)
[»] chr6 (35 HSPs)
chr6 (154-255)||(10294079-10294181)
chr6 (147-207)||(9027143-9027203)
chr6 (132-207)||(853893-853968)
chr6 (147-255)||(16766662-16766771)
chr6 (147-207)||(5000660-5000720)
chr6 (147-287)||(5732474-5732604)
chr6 (132-200)||(8365560-8365628)
chr6 (134-206)||(12696277-12696348)
chr6 (147-255)||(9107355-9107464)
chr6 (156-207)||(9629357-9629408)
chr6 (132-207)||(30866178-30866253)
chr6 (132-206)||(6389693-6389767)
chr6 (157-207)||(9658854-9658904)
chr6 (169-207)||(19040339-19040377)
chr6 (132-200)||(3398569-3398637)
chr6 (147-207)||(7938081-7938141)
chr6 (158-206)||(13851712-13851760)
chr6 (147-206)||(7977865-7977924)
chr6 (164-207)||(20371144-20371187)
chr6 (147-250)||(34073337-34073441)
chr6 (154-207)||(426548-426601)
chr6 (166-207)||(7265627-7265668)
chr6 (155-207)||(8777007-8777059)
chr6 (147-207)||(34595099-34595159)
chr6 (240-287)||(426478-426525)
chr6 (164-207)||(17841623-17841666)
chr6 (155-238)||(31579229-31579311)
chr6 (1045-1091)||(2115530-2115576)
chr6 (132-206)||(25038106-25038180)
chr6 (133-207)||(31959111-31959184)
chr6 (259-289)||(34073276-34073306)
chr6 (246-287)||(2117134-2117175)
chr6 (174-207)||(10842524-10842557)
chr6 (1085-1138)||(18286713-18286766)
chr6 (157-251)||(26562664-26562759)
[»] chr8 (20 HSPs)
chr8 (154-255)||(22651948-22652050)
chr8 (149-255)||(29510289-29510396)
chr8 (132-200)||(25192388-25192456)
chr8 (141-207)||(926822-926888)
chr8 (154-207)||(27213519-27213572)
chr8 (132-200)||(126390-126457)
chr8 (132-207)||(13436998-13437073)
chr8 (164-207)||(31109552-31109595)
chr8 (145-207)||(24362236-24362298)
chr8 (174-207)||(39954313-39954346)
chr8 (167-207)||(31236611-31236651)
chr8 (164-240)||(37283812-37283887)
chr8 (132-207)||(4298920-4298994)
chr8 (132-207)||(11944615-11944690)
chr8 (145-207)||(4673459-4673521)
chr8 (1086-1140)||(25971173-25971227)
chr8 (173-207)||(27101506-27101540)
chr8 (165-207)||(34897068-34897110)
chr8 (132-250)||(11927076-11927195)
chr8 (174-207)||(13844630-13844663)
[»] chr2 (30 HSPs)
chr2 (132-243)||(21782817-21782927)
chr2 (132-196)||(33519736-33519800)
chr2 (132-207)||(20539708-20539783)
chr2 (147-238)||(4332891-4332981)
chr2 (157-207)||(21616737-21616787)
chr2 (132-205)||(19536434-19536507)
chr2 (131-204)||(23717976-23718048)
chr2 (131-204)||(24105648-24105720)
chr2 (180-238)||(1327976-1328033)
chr2 (157-255)||(36409614-36409711)
chr2 (147-232)||(18276486-18276570)
chr2 (133-198)||(21624217-21624282)
chr2 (174-287)||(19573970-19574078)
chr2 (182-255)||(44860320-44860394)
chr2 (903-982)||(5424847-5424925)
chr2 (169-257)||(18420417-18420506)
chr2 (240-287)||(19536361-19536408)
chr2 (172-207)||(37411278-37411313)
chr2 (131-205)||(14996260-14996333)
chr2 (240-286)||(18255945-18255991)
chr2 (131-206)||(21374734-21374810)
chr2 (147-237)||(28412315-28412404)
chr2 (149-207)||(31018557-31018615)
chr2 (1061-1107)||(33455859-33455905)
chr2 (240-286)||(34691770-34691816)
chr2 (240-286)||(34714182-34714228)
chr2 (131-252)||(2331743-2331863)
chr2 (145-206)||(4142875-4142936)
chr2 (1052-1097)||(7252252-7252297)
chr2 (165-206)||(21091706-21091747)
[»] scaffold0306 (1 HSPs)
scaffold0306 (131-207)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (132-287)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (131-207)||(21902-21978)
[»] chr1 (33 HSPs)
chr1 (155-207)||(6427323-6427375)
chr1 (147-207)||(40917716-40917776)
chr1 (148-207)||(398799-398858)
chr1 (155-207)||(2896155-2896207)
chr1 (140-286)||(10572535-10572690)
chr1 (131-206)||(5376535-5376609)
chr1 (132-207)||(5927374-5927449)
chr1 (234-287)||(48547938-48547991)
chr1 (163-207)||(12443494-12443538)
chr1 (171-207)||(17831565-17831601)
chr1 (171-207)||(36878450-36878486)
chr1 (154-246)||(1486703-1486796)
chr1 (147-247)||(38503285-38503386)
chr1 (145-200)||(48040503-48040558)
chr1 (154-232)||(1262856-1262933)
chr1 (157-207)||(9709795-9709845)
chr1 (157-207)||(34298411-34298461)
chr1 (132-206)||(39130802-39130876)
chr1 (1043-1140)||(19810946-19811043)
chr1 (171-207)||(19562655-19562691)
chr1 (171-206)||(609493-609528)
chr1 (164-207)||(6415035-6415078)
chr1 (132-207)||(31014993-31015068)
chr1 (164-207)||(46348417-46348460)
chr1 (155-206)||(48450622-48450673)
chr1 (171-205)||(3490426-3490460)
chr1 (173-207)||(10475011-10475045)
chr1 (141-207)||(15641064-15641130)
chr1 (171-209)||(40285686-40285724)
chr1 (154-207)||(20157384-20157437)
chr1 (174-207)||(21530681-21530714)
chr1 (177-255)||(25361881-25361960)
chr1 (177-206)||(41877505-41877534)
[»] chr3 (27 HSPs)
chr3 (132-207)||(8383207-8383282)
chr3 (145-244)||(5441029-5441128)
chr3 (168-257)||(8039818-8039908)
chr3 (147-206)||(24205076-24205135)
chr3 (132-198)||(8842280-8842346)
chr3 (163-228)||(5407261-5407325)
chr3 (147-207)||(28917966-28918026)
chr3 (147-206)||(4991002-4991061)
chr3 (141-200)||(10335327-10335386)
chr3 (132-255)||(25064859-25064981)
chr3 (132-207)||(55401025-55401100)
chr3 (133-207)||(8587055-8587129)
chr3 (156-206)||(9800014-9800064)
chr3 (133-207)||(32429414-32429488)
chr3 (155-207)||(2620087-2620139)
chr3 (147-207)||(15796328-15796388)
chr3 (155-207)||(26492239-26492291)
chr3 (164-203)||(21720746-21720785)
chr3 (251-289)||(4466538-4466576)
chr3 (259-289)||(5440965-5440995)
chr3 (157-207)||(12674535-12674585)
chr3 (251-289)||(13807237-13807275)
chr3 (131-205)||(14223889-14223962)
chr3 (1052-1097)||(1348868-1348913)
chr3 (164-205)||(3865592-3865633)
chr3 (164-205)||(12703989-12704030)
chr3 (175-228)||(34307794-34307846)
[»] scaffold0168 (3 HSPs)
scaffold0168 (141-287)||(21002-21149)
scaffold0168 (226-287)||(21217-21278)
scaffold0168 (226-287)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (147-207)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (147-206)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (147-255)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (165-206)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (172-257)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (135-207)||(178853-178925)
scaffold0018 (165-206)||(192284-192325)
[»] chr4 (15 HSPs)
chr4 (147-207)||(23293020-23293080)
chr4 (171-206)||(35723420-35723455)
chr4 (171-205)||(17345451-17345485)
chr4 (149-206)||(847918-847975)
chr4 (154-207)||(36635296-36635349)
chr4 (147-206)||(24343472-24343531)
chr4 (149-255)||(30982863-30982967)
chr4 (164-206)||(7012048-7012090)
chr4 (126-207)||(7670625-7670709)
chr4 (157-207)||(20521883-20521933)
chr4 (147-205)||(20633450-20633508)
chr4 (164-287)||(30298928-30299048)
chr4 (164-287)||(30327796-30327916)
chr4 (173-207)||(40613441-40613475)
chr4 (136-205)||(28084475-28084544)
[»] scaffold0652 (1 HSPs)
scaffold0652 (147-207)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (132-208)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (147-206)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (164-207)||(51793-51836)
[»] scaffold0697 (1 HSPs)
scaffold0697 (174-207)||(1636-1669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (162-244)||(28830-28913)


Alignment Details
Target: chr5 (Bit Score: 1111; Significance: 0; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 1111; E-Value: 0
Query Start/End: Original strand, 1004 - 2174
Target Start/End: Complemental strand, 38815781 - 38814608
Alignment:
Q  1004 taagtagtagtgcttgtaagtttggacagtgcgcacctgacaagccgattttgtagggttgaattagactcaacccaaactctaagatgatatcggagtc 1103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38815781 taagtagtagtgcttgtaagtttggacagtgcgcacctgacaagccgattttgtagggttgaattagactcaacccaaactctaagatgatatcggagtc 38815682  T
Q  1104 tatcctagatctgttgttggactgcccgcattgtccatgcccctagcccaatttatgccaggttgtgaggcag--tgttggaaattttgccttgattgtg 1201  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  38815681 tatcctagatctgttgttggactgcccgcattgtccatgcccctagtccaatttatgccaggttgtgaggcagggtgttggaaattttgccttgattgtg 38815582  T
Q  1202 gtctgcccctagccatcttaaatttggcttttaaatttccttcattgcagcttcgagcaccttaattttgctgggtgtgagaggctgggttagtcctaca 1301  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38815581 gtcttcccctagccatcttaaatttggcttttaaatttccttcattgcagcttcgagcaccttaattttgctgggtgtgagaggctgggttagtcctaca 38815482  T
Q  1302 cagcctagagatctaaatagccgtgaagggcctctt-gtgtggtgttgtgttagttgtgatttagtttagtggggcctgagaattttatttgcttttgtc 1400  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38815481 cagcctagagatctaaatagccgtgaagggcctctttgtgtggtgttgtgttagttttgatttagtttagtggggcctgagaattttatttgcttttgtc 38815382  T
Q  1401 taataggaagtggattgttctgtggcttcctgtggattgtttggtgagcctagcttggttatgtgttaggagagagcgtctatttcttttgtttgaggag 1500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38815381 taataggaagtggattgttctgtggcttcctgtggattgtttggtgagcctagcttggttatgtgttaggagagagcgtctatttcttttgtttgaggag 38815282  T
Q  1501 tggttaattaattctctcttttaagttggggttttctgtttaggtgttatgttacctatgctctgtataggcagtgtggttgtaaccttttttcccaccg 1600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38815281 tggttaattaattctctcttttaagttggggttttctgtttaggtgttatgttacctatgctctgtataggcagtgtggttgtaaccttttttgccaccg 38815182  T
Q  1601 gatacgtcttgtgttttagatcaagttttttcaaccnnnnnnnngtactaataaatttgagtagtcatcatcttacaagtcaagttgattttgtagtgtt 1700  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38815181 gatacgtcttgtgttttagatcaagttttttcaaccaaaaaaaagtactaataaatttgagtagtcatcatcttacaagtcaagttgattttgtagtgtt 38815082  T
Q  1701 gaattagaccaacccaaattctatgaactgcaatagtacagttatgtgattgaacatatctctaattatgaaaatgcgacaggttcctgaatttgaggag 1800  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38815081 gaattagaccaacccaaattctatgaactgcaatagtacagttatgtgattgaacatatctctaattatgaaaatgcgacaggttcctgaatttgaggag 38814982  T
Q  1801 gctgcgtttagtgcacctttaaacaaaattgtaaggtgcaagacccaatttggatggcacttgctgcaagttttatctgagaggtatttccaggcatatg 1900  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38814981 gctgcgtttagtgcacctttaaacaaaattgtaaggtgcaagacccaatttggatggcacttgctgcaagttttatctgagaggtatttccaggcatatg 38814882  T
Q  1901 ctttttaagttgaatgataagatgtgtttagttccaatgtgaaattcattgaatatttggctatttattaaccctaattgattgtttgatccaattagcc 2000  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38814881 ctttttaagttggatgataagatgtgtttagttccaatgtgaaattcattgaatatttggctatttattaaccctaattgattgtttgatccaattagcc 38814782  T
Q  2001 aacatcaccttatgggatgatagtagttgtttgttttaatgagtttctcatgccttgtaaatttactccattaattgtcagggaagaaccagtacttcta 2100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38814781 aacatcaccttatgggatgatagtagttgtttgttttaatgagtttctcatgccttgtaaatttactccattaattgtcagggaagaaccagtacttcta 38814682  T
Q  2101 gacattcaacctgatgagctgcatgtgaaatttcaagatcccaatttcttggaggaggcacagttgattgatgt 2174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38814681 gacattcaacctgatgagctgcatgtgaaatttcaagatcccaatttcttggaggaggcacagttgattgatgt 38814608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 954; E-Value: 0
Query Start/End: Original strand, 1 - 1008
Target Start/End: Complemental strand, 38816928 - 38815928
Alignment:
Q  1 agagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgcttgaattgaagcaataatttga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38816928 agagagtcgctgcaggttaaaaatagttgggttttacaattcaattaatgtaatatggtatattgtttgtatcattgtttgaattgaagcaataatttga 38816829  T
Q  101 gaaaatagaataattgaacggtaaccatatactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  38816828 gaaaatagaataattgaacggtaaccatatactatgaagcactaatacggactccg-------cacggatactgacacgccgacaccgctaataatttga 38816736  T
Q  201 gaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagttatattcgtgaa 300  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38816735 gaaaatcgctatatttcagtataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgattcatagttatattcgtgaa 38816636  T
Q  301 tcgtgatagtgttggagactgacatctgttggacactggacacacctttaatatgaagtctcggtgctagatatttatgggagatatttatttgtgaagt 400  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816635 tcgtgatagtgttggagactgacatctgttggacactgcacacacctttaatatgaagtctcggtgctagatatttatgggagatatttatttgtgaagt 38816536  T
Q  401 ttctttctaaggctttcttgttgtgtgttcaggtgaagatttgagtgatcttgctgtggaacattcaatttgcccttctaaagatgaaggaggaatgctt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816535 ttctttctaaggctttcttgttgtgtgttcaggtgaagatttgagtgatcttgctgtggaacattcaatttgcccttctaaagatgaaggaggaatgctt 38816436  T
Q  501 gggtgggtgagaaagggacaaatggtatgctgttgtttaggtttaattaaaccttgttcttagggttttacattttgtctagattttgcagttggctact 600  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816435 gggtgggtgagaaagggacaaatggtatgctgttgtttaggtttaattaaaccttgttcttagggttttacattttgtctagattttgcagttggctact 38816336  T
Q  601 ttttgtggttacagttggtatacatcacggccttatgtaaattaaactgactttgtctgttagagaagggtatatagttgtatgaggtttctttgggtag 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816335 ttttgtggttacagttggtatacatcacggccttatgtaaattaaactgactttgtctgttagagaagggtatatagttgtatgaggtttctttgggtag 38816236  T
Q  701 gtgagaaattgaggttcaaaggatacaatataccttttcttgcattttctttcactgagttatgataattgtgcatgtgattctgtgaagggaattggat 800  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816235 gtgagaaattgaggttcaaaggatacaatataccttttcttgcattttctttcactgagttatgataattgtgcatgtgattctgtgaagggaattggat 38816136  T
Q  801 aagatagaaatgtaaacctagttatagaagtgtaatttttaaaattaattttactgttgttgggaaattctactttaattgtggtctgcctctaaccacc 900  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  38816135 aagatagaaatgtaaacctagttatagaagtgtaatttttaaaattaattttactgttgttgggaaattctactttaattgtggactgcctctaaccacc 38816036  T
Q  901 ttaattgcggcatttaggttttccctcattgtcgcttccaacaccttcattgtgttggacttgagaggtcgggtttagtcccgcatgaccaagagacatg 1000  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816035 ttaattgcggcatttgggttttccctcattgtcgcttccaacaccttcattgtgttggacttgagaggtcgggtttagtcccgcatgaccaagagacatg 38815936  T
Q  1001 gcctaagt 1008  Q
    ||||||||    
T  38815935 gcctaagt 38815928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 6e-54
Query Start/End: Original strand, 1731 - 2011
Target Start/End: Complemental strand, 38821537 - 38821252
Alignment:
Q  1731 caatagtacagttatgtgattgaacatatctctaattatgaaaatgcgacaggttcctgaatttgaggaggctgcgtttagtgcacctttaaacaaaatt 1830  Q
    |||||||||| ||||||||||| |||||||| |  | ||| ||||||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  38821537 caatagtacaattatgtgattggacatatctttgttgatgtaaatgcatcaggttcctgaatttgaggaggctgtgtttagtgcacctttaaacaaagtt 38821438  T
Q  1831 gtaaggtgcaagacccaatttggatggcacttgctgcaagttttatctgagaggtatttccaggcatatgctttt---taagttgaatgataagatgtgt 1927  Q
    |||| |||||||||  |||||||||||||| ||||||| ||||||||||| ||||||||| || |||||  ||||    |||||| ||| ||| ||||||    
T  38821437 gtaatgtgcaagacaaaatttggatggcacctgctgcaggttttatctgaaaggtatttcaagacatatttttttctccaagttggatggtaaaatgtgt 38821338  T
Q  1928 ttagttccaatgtgaaattcattgaatatttggctattt--attaaccctaattgattgtttgatccaattagccaacatcacctt 2011  Q
    ||  |||  ||| |||||| ||||||||||||| |||||   | || ||| ||||||||||||||| |||||||||||| ||||||    
T  38821337 ttctttcggatgggaaatttattgaatatttggttattttcgtaaatccttattgattgtttgatctaattagccaacaccacctt 38821252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-34
Query Start/End: Original strand, 419 - 568
Target Start/End: Complemental strand, 38821928 - 38821782
Alignment:
Q  419 tgttgtgtgttcaggtgaagatttgagtgatcttgctgtggaacattcaatttgcccttctaaagatgaaggaggaatgcttgggtgggtgagaaaggga 518  Q
    |||||||||| |||||||||||||||| ||||||||||||||  ||||  | ||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  38821928 tgttgtgtgtccaggtgaagatttgagcgatcttgctgtggactattcggtgtgcccatctaaagaagaaggaggaaggcttgggtgggtgagaaaggga 38821829  T
Q  519 caaatggtatgctgttgtttaggtttaattaaaccttgttcttagggttt 568  Q
    |||||||||   || ||||||| |||  ||||| ||||||||||||||||    
T  38821828 caaatggta---tgatgtttagatttgcttaaatcttgttcttagggttt 38821782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-24
Query Start/End: Original strand, 2080 - 2174
Target Start/End: Complemental strand, 38821160 - 38821066
Alignment:
Q  2080 agggaagaaccagtacttctagacattcaacctgatgagctgcatgtgaaatttcaagatcccaatttcttggaggaggcacagttgattgatgt 2174  Q
    ||||||||| | ||| ||| ||||||||||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||||| ||||||||    
T  38821160 agggaagaatctgtatttcaagacattcaacctgatgagctgcatgtgaaacttcaagatcccaacttctcgaaggaggcacagttaattgatgt 38821066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 19820503 - 19820428
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  19820503 ctatgaagcacggatacggacaccggacacgacacggacactgacactccgacaccgctaataatttgagaaaatc 19820428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-21
Query Start/End: Original strand, 158 - 287
Target Start/End: Complemental strand, 22423895 - 22423764
Alignment:
Q  158 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtc-ggac 254  Q
    ||||| ||||||||||||||| | |||||  ||||||||||||||||||| | ||| |||| ||||||  ||| ||||||||| ||||||||||| ||||    
T  22423895 acacgacacggatactgacaccctgacactactaataatttgagaaaatcac-ataattcaatataattatatatgtcggtgtcgtgtcggtgtctggac 22423797  T
Q  255 atggctaattcgaggagtgtccgtgcttcatag 287  Q
    | | ||||| |||||||||||||||||||||||    
T  22423796 acgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 22013364 - 22013431
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttg 199  Q
    |||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||    
T  22013364 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacacagctaataatttg 22013431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 42469171 - 42469245
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||||||| | |||||| ||| ||||| |||||||| |||||||||||||| | |||||||||||||||||    
T  42469171 ctatgaagcacggacacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaat 42469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 15410532 - 15410483
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaat 15410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 6326384 - 6326332
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||    
T  6326384 ccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaat 6326332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 37328955 - 37328829
Alignment:
Q  130 tactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--a 227  Q
    |||||||||||||| | |||||| ||| ||||| |||||| ||||| || ||||||| || |||||||||  |||||| | | | |||| | |||||  |    
T  37328955 tactatgaagcacggacacggacaccgaacacgacacggacactgatacaccgacacagcaaataatttgtaaaaatcac-aaaattcagtgtaattaca 37328857  T
Q  228 tgtgtcggtgtggtgtcggtgtcggaca 255  Q
    ||||||||||| ||||||||||||||||    
T  37328856 tgtgtcggtgtcgtgtcggtgtcggaca 37328829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 3966492 - 3966577
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 255  Q
    ||||||| ||||||||||||||||||||||||||||| | | | |||| | ||||  ||||||||||||| ||||| ||||||||||    
T  3966492 actgacatgccgacaccgctaataatttgagaaaatcac-acaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggaca 3966577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 15382442 - 15382500
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    |||||| ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||    
T  15382442 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaa 15382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 6035472 - 6035505
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaa 204  Q
    ||||||||||||||||||||||||||||||||||    
T  6035472 actgacacgccgacaccgctaataatttgagaaa 6035505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 8420075 - 8420124
Alignment:
Q  240 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatagtt 289  Q
    |||||||||||||||  | |||||||||||||| ||||||||||||||||    
T  8420075 gtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 21191143 - 21191090
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||| |||||| ||||||| |||||||| ||||||||||||| ||||||    
T  21191143 ccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatc 21191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 9929668 - 9929720
Alignment:
Q  235 gtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
    |||| |||||||| ||||||| | ||||||||||||||||| |||||||||||    
T  9929668 gtgtcgtgtcggtatcggacacgactaattcgaggagtgtctgtgcttcatag 9929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 17123037 - 17123073
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17123037 actgacacgccaacaccgctaataatttgagaaaatc 17123073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 21522722 - 21522766
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataattt 198  Q
    ||||||||| |||||| |||||||||||||||| |||||||||||    
T  21522722 ccggacacgacacggacactgacacgccgacacagctaataattt 21522766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 21533288 - 21533332
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataattt 198  Q
    ||||||||| |||||| |||||||||||||||| |||||||||||    
T  21533288 ccggacacgacacggacactgacacgccgacacagctaataattt 21533332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 27144452 - 27144488
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27144452 actgacacgccgacaccgctaataatttgaggaaatc 27144488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 6247572 - 6247647
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||| |||| || ||||| |||||||||  ||| | ||||||||||||||||  |||||||||||| ||||||    
T  6247572 ctatgaaacacggatgcggacaccggacacgatacgcacactgacacgccgacacatctaataatttgaaaaaatc 6247647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 11685928 - 11686012
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 255  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| || | | ||||  ||||||||||||| || |||||||||||||    
T  11685928 actgacatgccgacaccgctaataatttgagaaagtcgc-ataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggaca 11686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 14674251 - 14674294
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  14674251 cacggacactgacacgccgacacagctaataatttgaaaaaatc 14674294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 19579683 - 19579726
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||    
T  19579683 cacggacactgatacgccgacacagctaataatttgagaaaatc 19579726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 21137654 - 21137713
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| ||||||||  |||||| ||||||||||||||| || ||||||| |||||||||    
T  21137654 acggacaccggacacaacacggacactgacacgccgacatcggtaataatctgagaaaat 21137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 34879332 - 34879375
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||| ||||||||| ||||||||| ||||||||||||||    
T  34879332 cacggatacggacacgccggcaccgctaaaaatttgagaaaatc 34879375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 5873590 - 5873548
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| ||||||| ||||||||| ||||||||||||||||||    
T  5873590 cacggacactgacatgccgacacctctaataatttgagaaaat 5873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 24906280 - 24906250
Alignment:
Q  259 ctaattcgaggagtgtccgtgcttcatagtt 289  Q
    |||||||||||||||||||||||||||||||    
T  24906280 ctaattcgaggagtgtccgtgcttcatagtt 24906250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 206
Target Start/End: Original strand, 27932229 - 27932259
Alignment:
Q  176 cacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||||||||||||||||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaat 27932259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 28588742 - 28588708
Alignment:
Q  173 tgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||||||| ||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatc 28588708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 348
Target Start/End: Complemental strand, 35665597 - 35665559
Alignment:
Q  310 tgttggagactgacatctgttggacactggacacacctt 348  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  35665597 tgttggaaactgacatgtgttggacactggacacacctt 35665559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 36642849 - 36642803
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttga 200  Q
    ||||||||| |||||| |||||||||||||||| | |||||||||||    
T  36642849 ccggacacgacacggacactgacacgccgacacagttaataatttga 36642803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 19552626 - 19552577
Alignment:
Q  158 acacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 19552577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 30135264 - 30135336
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    |||||||||||  |||||||| | ||||||| ||| ||||| |||||||||||||  |||||||||||| ||||    
T  30135264 ctatgaagcacatatacggacac-ggacacgacacagataccgacacgccgacacaactaataatttgaaaaaa 30135336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 209
Target Start/End: Complemental strand, 32767004 - 32766975
Alignment:
Q  180 ccgacaccgctaataatttgagaaaatcgc 209  Q
    ||||||||||||||||||||||||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgc 32766975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 805 - 854
Target Start/End: Complemental strand, 38821591 - 38821542
Alignment:
Q  805 tagaaatgtaaacctagttatagaagtgtaatttttaaaattaattttac 854  Q
    ||||||| || |||||||||||||||||   |||||||||||||||||||    
T  38821591 tagaaatatagacctagttatagaagtgccttttttaaaattaattttac 38821542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-21; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 27944991 - 27945065
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||||||| |||||||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  27944991 ctatgaagcacggatacggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaat 27945065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 24105629 - 24105702
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||||||| ||||||| | |||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  24105629 ctatgaagcacggatacgga-tacggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 24105702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 29787435 - 29787354
Alignment:
Q  175 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatg 257  Q
    ||||||||||||||||||||||||||||||||| | ||| |||| | ||||||||||| |||||  ||||||||| |||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattatgtgttggtgtaatgtcggtgttggacatg 29787354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 11722185 - 11722132
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  11722185 ccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatc 11722132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 24339605 - 24339716
Alignment:
Q  145 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtg 242  Q
    |||||||| ||||||||| || ||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||    
T  24339605 atacggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtg 24339703  T
Q  243 tcggtgtcggaca 255  Q
    |||||||||||||    
T  24339704 tcggtgtcggaca 24339716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 19206025 - 19206107
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 238  Q
    |||||| |||||| ||  ||||||||||||||||||||||||||||||||| | ||| |||||||||||  |||||||||||||    
T  19206025 gacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcac-ataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 32308109 - 32308194
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 255  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||| | ||||  |||||||| |||| |||||||||| |||||    
T  32308109 actgacacgccgacaccgctaataatttgagaaaatcac-ataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggaca 32308194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 287
Target Start/End: Original strand, 11700798 - 11700909
Alignment:
Q  177 acgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcgg--acatggctaattcgaggagtgt 274  Q
    |||| ||||||| ||||||||||| |||||| | ||| |||| | |||||||||||| |||| || ||||||||||  ||| ||||||| ||||||||||    
T  11700798 acgctgacaccgttaataatttgacaaaatcac-ataattcaatgtaattatgtgtctgtgttgtctcggtgtcggacacacggctaatccgaggagtgt 11700896  T
Q  275 ccgtgcttcatag 287  Q
    || || |||||||    
T  11700897 ccctgattcatag 11700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 1433419 - 1433479
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||| ||||| |||||| | |||||||||||||||| ||||||||||||||||||    
T  1433419 acggacaccgaacacgacacggacattgacacgccgacaccgttaataatttgagaaaatc 1433479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 7328805 - 7328639
Alignment:
Q  127 atatactatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat- 225  Q
    ||||||||||||||||| |||||||| ||| ||||| ||| || | | ||||| ||| || |||||||||||||||||||  | ||| || | | ||||     
T  7328805 atatactatgaagcacggatacggacaccgaacacgacacagacattaacacgtcgatactgctaataatttgagaaaataac-ataatttagtgtaatt 7328707  T
Q  226 -tatgtgtcggtgtggtgtc-----ggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
     ||||||||||||| |||||     ||||||||||| | ||||| ||| |||||| ||||||||||||    
T  7328706 atatgtgtcggtgtcgtgtcgtgttggtgtcggacacgcctaatccgatgagtgttcgtgcttcatag 7328639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 2034392 - 2034462
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaa 203  Q
    |||||||||||| ||||||| | | |||||| |||||||||| ||||| ||||||| |||||||||||||||    
T  2034392 ctatgaagcacggatacgga-tactgacacgacacggatacttacacgtcgacaccactaataatttgagaa 2034462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 2425818 - 2425767
Alignment:
Q  156 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||    
T  2425818 ggacacgacacagatactgacacgccggcaccgttaataatttgagaaaatc 2425767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 43027578 - 43027503
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||| || ||||| | ||||||| |||||| ||||||||| |||| | ||||||||||||| ||||||    
T  43027578 ctatgaagcacggatgcggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatc 43027503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 43249958 - 43250017
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| ||||||| | |||||| |||||||||||||||| | |||||||||||||||||    
T  43249958 acggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaat 43250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 8046103 - 8046061
Alignment:
Q  165 acggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  8046103 acggatactgacacgccaacaccactaataatttgagaaaatc 8046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 238
Target Start/End: Original strand, 22484014 - 22484082
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 238  Q
    |||||||||||||||||||||||||||| ||||||| || ||| |||| ||||||  |||||||||||||    
T  22484014 actgacacgccgacaccgctaataattttagaaaattgc-ataattcagtataattatatgtgtcggtgt 22484082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 23191879 - 23191921
Alignment:
Q  165 acggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||| ||||| |||||||||||||||||||||||||||||||    
T  23191879 acggacactgatacgccgacaccgctaataatttgagaaaatc 23191921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 26733279 - 26733329
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||| ||||||||| |||||||||||||||||||| ||||||    
T  26733279 gacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatc 26733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
Q  176 cacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtc 250  Q
    |||||||||||||| ||||||||||||||||| | ||| |||| | ||||| ||||||||||| |||| ||||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcac-ataattcagtgtaattgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 11072290 - 11072362
Alignment:
Q  174 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggt 247  Q
    ||||||||||||||| ||||||||||| ||||    |||| |||| ||||||||||||||||||| ||||||||    
T  11072290 gacacgccgacaccgataataatttgaaaaaaata-tataattcaatataattatgtgtcggtgtcgtgtcggt 11072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1043 - 1140
Target Start/End: Complemental strand, 39079973 - 39079876
Alignment:
Q  1043 acaagccgattttgtagggttgaattagactcaacccaaactctaagatgatatcggagtctatcctagatctgttgttggactgcccgcattgtcca 1140  Q
    |||||||| ||||||| |||| | |||| | ||||||||| | |||||||  ||| ||| ||||||||||||||| ||||| || || ||||||||||    
T  39079973 acaagccggttttgtaaggtttagttaggcccaacccaaattttaagatggcatcagagcctatcctagatctgtcgttgggcttcctgcattgtcca 39079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 49107795 - 49107844
Alignment:
Q  156 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    ||||||| ||||||  ||||||| ||||||||||||||||||||||||||    
T  49107795 ggacacgacacggactctgacacaccgacaccgctaataatttgagaaaa 49107844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 20549780 - 20549816
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||| ||||||||||||||||||||||||||||    
T  20549780 actgacacaccgacaccgctaataatttgagaaaatc 20549816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 2948669 - 2948708
Alignment:
Q  168 gatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||||||||||||| ||||||| ||||||||    
T  2948669 gatactgacacgccgacaccgctgataattttagaaaatc 2948708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 255
Target Start/End: Complemental strand, 6630982 - 6630897
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 255  Q
    ||||||||||||||||| |||||||||||||||| || || || |||| | ||||  ||||||||| ||| |||| |||||||||||    
T  6630982 actgacacgccgacaccactaataatttgagaaagtcact-taattcagtgtaattatatgtgtcgatgtcgtgttggtgtcggaca 6630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 21828482 - 21828439
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||||||||||||||| || |||||||||||||||    
T  21828482 cacggacactgacacgccgacaccgttagtaatttgagaaaatc 21828439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 206
Target Start/End: Original strand, 28155563 - 28155594
Alignment:
Q  175 acacgccgacaccgctaataatttgagaaaat 206  Q
    ||||||||||||||||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaat 28155594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 598160 - 598233
Alignment:
Q  133 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||  |||||| || |||| | |||||| ||||||||  |||||||||||||||||| ||||||||    
T  598160 tatgaagcacgac-acggacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatc 598233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 5235960 - 5236010
Alignment:
Q  156 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||||| ||| || ||||||||| |||||||||||||||||| |||||||    
T  5235960 ggacacgacacagacactgacacgtcgacaccgctaataatttaagaaaat 5236010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 255
Target Start/End: Original strand, 9933282 - 9933347
Alignment:
Q  189 ctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 255  Q
    |||||||||||| |||||| | |||||||| || | ||||||||| |||| ||||||||||||||||    
T  9933282 ctaataatttgaaaaaatcac-atatttcagtaaacttatgtgtcagtgtcgtgtcggtgtcggaca 9933347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 20545312 - 20545270
Alignment:
Q  165 acggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  20545312 acggatacggacacgccaacaccgctaataatttgaaaaaatc 20545270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 26329476 - 26329418
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    |||||| | ||||||| ||| || ||||||||||||||| || ||||||||||||||||    
T  26329476 acggacactggacacgacacagacactgacacgccgacatcgttaataatttgagaaaa 26329418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 4017879 - 4017830
Alignment:
Q  156 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    ||||||| |||||| || ||||||||||||| | ||||||||||||||||    
T  4017879 ggacacgacacggacaccgacacgccgacacggataataatttgagaaaa 4017830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 288
Target Start/End: Original strand, 17852091 - 17852120
Alignment:
Q  259 ctaattcgaggagtgtccgtgcttcatagt 288  Q
    ||||||||||||||||||||||||||||||    
T  17852091 ctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1035 - 1092
Target Start/End: Complemental strand, 21048749 - 21048692
Alignment:
Q  1035 cgcacctgacaagccgattttgtagggttgaattagactcaacccaaactctaagatg 1092  Q
    ||||||| ||||||| ||||| || |||||| |||| ||||||||||| |||||||||    
T  21048749 cgcaccttacaagccaattttataaggttgagttaggctcaacccaaattctaagatg 21048692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 25791642 - 25791675
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaa 204  Q
    ||||||||||||||||||||||| ||||||||||    
T  25791642 actgacacgccgacaccgctaattatttgagaaa 25791675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 1e-20; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 154 - 255
Target Start/End: Original strand, 10294079 - 10294181
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 251  Q
    ||||||||| |||||||||||||| ||||| |||||||||||||||||| |||||| |||||||| | ||||  ||||||||||||| |||| |||||||    
T  10294079 ccggacacgacacggatactgacatgccgataccgctaataatttgagataatcgc-atatttcaatgtaattatatgtgtcggtgtcgtgttggtgtcg 10294177  T
Q  252 gaca 255  Q
    ||||    
T  10294178 gaca 10294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 9027143 - 9027203
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  9027143 acggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatc 9027203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 853968 - 853893
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||| |||| |||||||| ||||||||| ||||||| |||||||||||||||  |||||||||||| ||||||    
T  853968 ctatgaatcacggatacggacaccggacacgacacggatgctgacacgccgacacaactaataatttgaaaaaatc 853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 147 - 255
Target Start/End: Original strand, 16766662 - 16766771
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 244  Q
    |||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |||||||||| |||||    
T  16766662 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaagtgtcggtgtcgtgtc 16766760  T
Q  245 ggtgtcggaca 255  Q
    |||||||||||    
T  16766761 ggtgtcggaca 16766771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 5000720 - 5000660
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||| | |||||||||||||||| ||||||||||||||||| |||||||||    
T  5000720 acggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatc 5000660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 287
Target Start/End: Complemental strand, 5732604 - 5732474
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcgg 246  Q
    |||||| | ||||||| || ||| |||||||||||||||||| |||||||||||||||||| | |||||| | | ||||||| |         |||||||    
T  5732604 acggacactggacacgacatggacactgacacgccgacaccgttaataatttgagaaaatcac-atattttagtgtaattatat---------gtgtcgg 5732515  T
Q  247 tgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
    ||||||||| | ||||| |||||||||||| ||||||||||    
T  5732514 tgtcggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 8365628 - 8365560
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 200  Q
    |||||||||||| |||||||| || |||||| |||||| ||||||||||||||||  ||||||||||||    
T  8365628 ctatgaagcacggatacggacaccagacacgacacggacactgacacgccgacacaactaataatttga 8365560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 12696277 - 12696348
Alignment:
Q  134 atgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||||| |||||||| | ||||||| |||||| |||||||||||||||| ||||||||||||| |||||    
T  12696277 atgaagcacggatacggacac-ggacacgacacggacactgacacgccgacacagctaataatttgaaaaaat 12696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 147 - 255
Target Start/End: Complemental strand, 9107464 - 9107355
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtc 244  Q
    |||||| ||||||||| |||||| ||| |||||||||||| ||||||||||||| |||||| | | | |||| | |||||  | |||||||||| |||||    
T  9107464 acggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtgtaattacaagtgtcggtgtcgtgtc 9107366  T
Q  245 ggtgtcggaca 255  Q
    |||||||||||    
T  9107365 ggtgtcggaca 9107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 9629357 - 9629408
Alignment:
Q  156 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||| |||||||| ||||||||||||||||| |||||||||||||||||    
T  9629357 ggacacgacacggatattgacacgccgacaccgccaataatttgagaaaatc 9629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 30866253 - 30866178
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||| |||||||||||| ||||||| | ||| || || ||||| || |||||||||||||||||||||||||    
T  30866253 ctatgaagtacgaatacggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatc 30866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 6389693 - 6389767
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||||||| | || ||| ||||||||| |||||| ||| |||||||||||| | |||||||||||||||||    
T  6389693 ctatgaagcacggacacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaat 6389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 9658854 - 9658904
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatc 9658904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 19040339 - 19040377
Alignment:
Q  169 atactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040339 atactgacacgccgacaccgctaataatttgagaaaatc 19040377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 3398569 - 3398637
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 200  Q
    |||||||||| | ||||||||  || ||||| |||||| |||||||||||||||| |||||||||||||    
T  3398569 ctatgaagcatggatacggacatcgaacacgacacggacactgacacgccgacacagctaataatttga 3398637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 7938081 - 7938141
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||| || ||| |||||||||||||||| ||||||||||||| ||||||    
T  7938081 acggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatc 7938141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 13851712 - 13851760
Alignment:
Q  158 acacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  13851712 acacgacacggacactgacacgtcgacaccgctaataatttgagaaaat 13851760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 7977924 - 7977865
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| | ||||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  7977924 acggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaat 7977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 20371187 - 20371144
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| | |||||||||||||||||||||||||||||||||||    
T  20371187 cacggacattgacacgccgacaccgctaataatttgagaaaatc 20371144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 34073441 - 34073337
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 244  Q
    |||||| | ||||||| |||||| ||||||| ||| ||| ||||||||||||||||||||| | ||| |||| | ||||  |||| |||||||| |||||    
T  34073441 acggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctc-ataattcagtgtaattatatgggtcggtgtcgtgtc 34073343  T
Q  245 ggtgtc 250  Q
    ||||||    
T  34073342 ggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 426601 - 426548
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||| |||||| |||||||||||||||| | ||||||||||| ||||||    
T  426601 ccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatc 426548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 7265668 - 7265627
Alignment:
Q  166 cggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatc 7265627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 8777059 - 8777007
Alignment:
Q  155 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||| |||||| ||||||||||||||||  |||||||||||| ||||||    
T  8777059 cggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 8777007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 34595099 - 34595159
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||| |||||| | ||||||||||||||  |||||||||||| ||||||    
T  34595099 acggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatc 34595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 426525 - 426478
Alignment:
Q  240 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||    
T  426525 gtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 17841666 - 17841623
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  17841666 cacggacactgacacgccgacacagctaataatttgaaaaaatc 17841623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 238
Target Start/End: Complemental strand, 31579311 - 31579229
Alignment:
Q  155 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 238  Q
    |||||||| || ||| |||| ||| || |||||| |||||||||||||||||| | ||| |||| | |||||||||||||||||    
T  31579311 cggacacgacatggacactgccacaccaacaccgttaataatttgagaaaatcac-ataattcagtgtaattatgtgtcggtgt 31579229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1045 - 1091
Target Start/End: Original strand, 2115530 - 2115576
Alignment:
Q  1045 aagccgattttgtagggttgaattagactcaacccaaactctaagat 1091  Q
    |||||| |||||||||||| |||||||||||||||||| | ||||||    
T  2115530 aagccggttttgtagggttcaattagactcaacccaaattttaagat 2115576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 25038180 - 25038106
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||||||| ||||||||   | | ||| ||| ||||||||||||  ||||||| |||||||||||||||||    
T  25038180 ctatgaagcacggatacggacattgaatacgacacagatactgacacgttgacaccgttaataatttgagaaaat 25038106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 31959111 - 31959184
Alignment:
Q  133 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||| |||||||| | ||||| | |||| | |||||||||||| ||| ||||||||||||| ||||||    
T  31959111 tatgaagcacggatacggacac-ggacatgacacgaacactgacacgccgtcacagctaataatttgaaaaaatc 31959184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 34073306 - 34073276
Alignment:
Q  259 ctaattcgaggagtgtccgtgcttcatagtt 289  Q
    |||||||||||||||||||||||||||||||    
T  34073306 ctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 2117134 - 2117175
Alignment:
Q  246 gtgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
    |||||||||||| |||||  ||||||||||||||||||||||    
T  2117134 gtgtcggacatgcctaatcggaggagtgtccgtgcttcatag 2117175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 10842524 - 10842557
Alignment:
Q  174 gacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||||||||||||||||| ||||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatc 10842557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1085 - 1138
Target Start/End: Original strand, 18286713 - 18286766
Alignment:
Q  1085 ctaagatgatatcggagtctatcctagatctgttgttggactgcccgcattgtc 1138  Q
    ||||||||||||| ||| ||||| |||||||||||| || || |||||||||||    
T  18286713 ctaagatgatatcagagcctatcgtagatctgttgtcgggcttcccgcattgtc 18286766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 26562664 - 26562759
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcg 251  Q
    ||||| ||||| | || ||||||||||||| ||||| |||||||||||||| | ||| |||| | ||||  ||||||||| ||| ||||||||||||    
T  26562664 gacaccgcacgaacacggacacgccgacactgctaaaaatttgagaaaatcac-ataattcagtgtaattatatgtgtcgatgtcgtgtcggtgtcg 26562759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-18; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-18
Query Start/End: Original strand, 154 - 255
Target Start/End: Original strand, 22651948 - 22652050
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcg 251  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| | ||| |||| |||||||  | |||||||||| ||||||||||||    
T  22651948 ccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-ataattcaatataattacaagtgtcggtgtcgtgtcggtgtcg 22652046  T
Q  252 gaca 255  Q
    ||||    
T  22652047 gaca 22652050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 29510396 - 29510289
Alignment:
Q  149 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcgg 246  Q
    |||| ||||||||| |||||| |||||||||||||||| ||||||||||||| |||||| | | | |||| |||||||  | |||||||||| |||||||    
T  29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcac-aaaattcagtataattacaagtgtcggtgtagtgtcgg 29510298  T
Q  247 tgtcggaca 255  Q
    |||||||||    
T  29510297 tgtcggaca 29510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 25192456 - 25192388
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 200  Q
    |||||||||||||||||||||  ||||||||  ||||| |||||||||||||||| |||||||||||||    
T  25192456 ctatgaagcacgaatacggacatcggacacgatacggacactgacacgccgacacagctaataatttga 25192388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 926888 - 926822
Alignment:
Q  141 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||| |||||| ||||||||| |||||| ||||||||||| ||||  |||||||||||||||||||    
T  926888 acgaacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatc 926822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 27213519 - 27213572
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||    
T  27213519 ccggacacgacacggatacagacacgccgacactgctaataatttcagaaaatc 27213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 126457 - 126390
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 200  Q
    |||||||||||| ||||| || | |||||||  ||||||||||||||||| ||||||||||||||||||    
T  126457 ctatgaagcacggatacgcacac-ggacacgatacggatactgacacgccaacaccgctaataatttga 126390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 13437073 - 13436998
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||| | | |||| ||||||| | || ||| |||||||||||||||| ||||||||||||| ||||||    
T  13437073 ctatgaagcacggacatggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatc 13436998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 31109595 - 31109552
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  31109595 cacggacactgacacgccgacaccgttaataatttgagaaaatc 31109552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 24362298 - 24362236
Alignment:
Q  145 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||| ||||| ||| ||| || || ||||||||||||||||||||||||||||| ||||    
T  24362298 atacggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatc 24362236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 39954346 - 39954313
Alignment:
Q  174 gacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||||||||||||||||||||||||    
T  39954346 gacacgccgacaccgctaataatttgagaaaatc 39954313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 31236651 - 31236611
Alignment:
Q  167 ggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  31236651 ggatacggacacgccgacactgctaataatttgagaaaatc 31236611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 37283887 - 37283812
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtgg 240  Q
    |||||| ||||||| || | ||||||||||||| |||||||||| | ||| |||| | |||||||||||||||||||    
T  37283887 cacggacactgacatgcgggcaccgctaataatctgagaaaatcac-ataattcagtgtaattatgtgtcggtgtgg 37283812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 4298994 - 4298920
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||| ||| |||| | ||||||| ||| |||||| |||||||||||| | ||||||||||| ||||||    
T  4298994 ctatgaagcacggatatggacac-ggacacgacacagatactaacacgccgacacagttaataatttgaaaaaatc 4298920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 11944615 - 11944690
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||  |||||||| ||  ||||| ||||||| || |||||||||||| | ||||||||||| ||||||    
T  11944615 ctatgaagcacagatacggacaccaaacacgacacggatgctaacacgccgacactgttaataatttgataaaatc 11944690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Complemental strand, 4673521 - 4673459
Alignment:
Q  145 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||  |||||||| ||| || |||||||||||||||| | ||||||||||| ||||||    
T  4673521 atacggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatc 4673459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1086 - 1140
Target Start/End: Original strand, 25971173 - 25971227
Alignment:
Q  1086 taagatgatatcggagtctatcctagatctgttgttggactgcccgcattgtcca 1140  Q
    |||||||  ||| ||| |||||||||||||||||||||||| ||||||| |||||    
T  25971173 taagatggaatcagagcctatcctagatctgttgttggacttcccgcatcgtcca 25971227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 27101506 - 27101540
Alignment:
Q  173 tgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||||||||||||||||||| ||||||    
T  27101506 tgacacgccgacaccgctaataatttgaaaaaatc 27101540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 34897068 - 34897110
Alignment:
Q  165 acggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||| || |||||| |||||||||||||||||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatc 34897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 250
Target Start/End: Complemental strand, 11927195 - 11927076
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatg 229  Q
    |||||||||||  |||||||| ||  ||||| ||||||| || | |||||||||| | ||||||||||| |||||| | ||| |||| | ||||  ||||    
T  11927195 ctatgaagcacagatacggacaccaaacacgacacggatgctaatacgccgacactgttaataatttgataaaatcac-ataattcagtgtaattatatg 11927097  T
Q  230 tgtcggtgtggtgtcggtgtc 250  Q
    ||||||||| |||| ||||||    
T  11927096 tgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 13844663 - 13844630
Alignment:
Q  174 gacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||| ||||||||||||||||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatc 13844630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-17; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-17
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 21782927 - 21782817
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 231  Q
    ||||||||||||||||| ||| | ||||||| |||  | |||||||||||||||| |||||||||||||||||||| | ||| |||| | ||||||||||    
T  21782927 ctatgaagcacgaatacagacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcac-ataattcagtgtaattatgtg 21782829  T
Q  232 tcggtgtggtgt 243  Q
     |||||| ||||    
T  21782828 ccggtgtcgtgt 21782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 33519736 - 33519800
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataat 196  Q
    |||||||||||| |||||||| ||||||||| | ||||||||||||| |||||||||||||||||    
T  33519736 ctatgaagcacggatacggacaccggacacgacgcggatactgacacaccgacaccgctaataat 33519800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 20539783 - 20539708
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||| |||||||| | ||||||| |||||| ||||||||| |||||| ||||||||||||| ||||||    
T  20539783 ctatgaagcacggatacggacactggacacgacacggacactgacacgtcgacacagctaataatttgaaaaaatc 20539708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 147 - 238
Target Start/End: Original strand, 4332891 - 4332981
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 238  Q
    |||||| ||||||||||||| |||||| ||| |||||||| | |||||||||| ||||||| | ||| |||| | |||||||||||||||||    
T  4332891 acggacaccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcac-ataattcaatgtaattatgtgtcggtgt 4332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 21616737 - 21616787
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatc 21616787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 19536507 - 19536434
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    |||||||||||  |||||||| ||||||||| |||||| | ||||||||||||||  |||||||||||| ||||    
T  19536507 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaa 19536434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 23717976 - 23718048
Alignment:
Q  131 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaa 204  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||||| |||||||||||||||||||||||||    
T  23717976 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 23718048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 24105648 - 24105720
Alignment:
Q  131 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaa 204  Q
    ||||||||||||| |||| ||| | ||||| | |||||| |||||||| |||||||||||||||||||||||||    
T  24105648 actatgaagcacggatacagacac-ggacatgacacggacactgacacaccgacaccgctaataatttgagaaa 24105720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 1327976 - 1328033
Alignment:
Q  180 ccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgt 238  Q
    ||||||||||||||||||||||||||||  || | |||| |||||||||||||||||||    
T  1327976 ccgacaccgctaataatttgagaaaatc-ataaaattcagtataattatgtgtcggtgt 1328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 255
Target Start/End: Complemental strand, 36409711 - 36409614
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggaca 255  Q
    |||||| |||||||||| ||| |||||||||||| ||||||||| |||||| | ||| || | | |||||||||||||||||  ||| |||||| ||||    
T  36409711 gacacgacacggatactcacatgccgacaccgctgataatttgaaaaaatcac-ataatttagtgtaattatgtgtcggtgtcatgttggtgtctgaca 36409614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 18276486 - 18276570
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 232  Q
    |||||| |||||||||  || || ||||| | ||||||||||||||||||||||||||||| || || |||| | |||||||||||    
T  18276486 acggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcact-taattcagtgtaattatgtgt 18276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 21624217 - 21624282
Alignment:
Q  133 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataattt 198  Q
    |||||||| || |||||||| ||| ||||| ||| || |||||||||||||||| |||||||||||    
T  21624217 tatgaagcccggatacggacaccgaacacgacacagacactgacacgccgacacagctaataattt 21624282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 287
Target Start/End: Original strand, 19573970 - 19574078
Alignment:
Q  174 gacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtg 273  Q
    ||||||||||||||| ||||||||| |||||||  | ||| |||| | |||||||     ||||  ||||||||||||||||   |||||||||||||||    
T  19573970 gacacgccgacaccgataataatttaagaaaataac-ataattcagtgtaattata----ggtggcgtgtcggtgtcggacacacctaattcgaggagtg 19574064  T
Q  274 tccgtgcttcatag 287  Q
    ||| ||||||||||    
T  19574065 tccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 44860320 - 44860394
Alignment:
Q  182 gacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 255  Q
    |||||||||||||||||||||||||||| ||| |||| | ||||  ||||||||||||| |||| ||||| |||||    
T  44860320 gacaccgctaataatttgagaaaatcgc-ataattcagtgtaattatatgtgtcggtgtcgtgttggtgttggaca 44860394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 903 - 982
Target Start/End: Complemental strand, 5424925 - 5424847
Alignment:
Q  903 aattgcggcatttaggttttccctcattgtcgcttccaacaccttcattgtgttggacttgagaggtcgggtttagtccc 982  Q
    ||||||||| ||| |||||||| ||||||  || |||||||||||||||||||||   ||||||||  ||||||||||||    
T  5424925 aattgcggccttt-ggttttccttcattgcagcctccaacaccttcattgtgttgcctttgagagggtgggtttagtccc 5424847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 257
Target Start/End: Complemental strand, 18420506 - 18420417
Alignment:
Q  169 atactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 257  Q
    ||||||||||||| |||| |||||||||||||||||||| | ||| |||| |  ||||||  |||||||||| |||||  |||||||||||    
T  18420506 atactgacacgccaacactgctaataatttgagaaaatcac-ataattcaatgcaattataagtgtcggtgttgtgtccatgtcggacatg 18420417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 287
Target Start/End: Complemental strand, 19536408 - 19536361
Alignment:
Q  240 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
    |||||||||||||||| | ||||| |||||||||||| ||||||||||    
T  19536408 gtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 172 - 207
Target Start/End: Complemental strand, 37411313 - 37411278
Alignment:
Q  172 ctgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||||||||||||||||||||||||||    
T  37411313 ctgacatgccgacaccgctaataatttgagaaaatc 37411278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 14996333 - 14996260
Alignment:
Q  131 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    ||||||||||||| |||||||| | | ||| | |||||| ||||||| |||||||| ||||||||||||| ||||    
T  14996333 actatgaagcacggatacggacgcag-acatgacacggacactgacaagccgacacagctaataatttgaaaaaa 14996260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 18255991 - 18255945
Alignment:
Q  240 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 286  Q
    |||||||||||||||| | ||||| | ||||||||||||||||||||    
T  18255991 gtgtcggtgtcggacacgcctaatccaaggagtgtccgtgcttcata 18255945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 21374810 - 21374734
Alignment:
Q  131 actatgaagcacgaatacggactccggacacgg--cacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||||||||||| |||||||| | |||||| |  |||||| ||| |||||||||||| ||||||||||||| |||||    
T  21374810 actatgaagcacggatacggacac-ggacaccggacacggacactaacacgccgacacagctaataatttgaaaaaat 21374734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 28412315 - 28412404
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtg 237  Q
    |||||| || |||||| |||||| ||| ||||| | |||||| ||||||||||| |||||| | ||| |||| | ||||||||||||||||    
T  28412315 acggacaccagacacgacacggacactaacacgtcaacaccgttaataatttgataaaatcac-ataattcagtgtaattatgtgtcggtg 28412404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 31018557 - 31018615
Alignment:
Q  149 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||| ||||| ||| || ||| ||||||||||| |||||||||||||||| ||||||||    
T  31018557 ggacaccggatacgacatggacactgacacgccaacaccgctaataatttcagaaaatc 31018615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 1061 - 1107
Target Start/End: Original strand, 33455859 - 33455905
Alignment:
Q  1061 gttgaattagactcaacccaaactctaagatgatatcggagtctatc 1107  Q
    ||||| |||||||||||||||| ||||||||| |||| |||||||||    
T  33455859 gttgagttagactcaacccaaattctaagatggtatcagagtctatc 33455905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 34691816 - 34691770
Alignment:
Q  240 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 286  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34691816 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34691770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 34714228 - 34714182
Alignment:
Q  240 gtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcata 286  Q
    |||||||||||||||| | ||||| ||||||||||||||| ||||||    
T  34714228 gtgtcggtgtcggacacgcctaatccgaggagtgtccgtgtttcata 34714182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 2331743 - 2331863
Alignment:
Q  131 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgt 230  Q
    ||||||||||||| | || |||  || || || |||||| | ||||||||  |||||  |||||||||||||||||| | ||| |||| | || ||||||    
T  2331743 actatgaagcacggacacagacatcgaacgcgacacggacattgacacgcaaacaccattaataatttgagaaaatcac-ataattcagtgtatttatgt 2331841  T
Q  231 gtcggtgtggtgtcggtgtcgg 252  Q
    |||||||| ||||| |||||||    
T  2331842 gtcggtgtcgtgtcagtgtcgg 2331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 4142936 - 4142875
Alignment:
Q  145 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||| ||| ||||| | |||| ||||||||||||||||| |||| ||||| |||||||    
T  4142936 atacggacaccgaacacgacccggacactgacacgccgacaccactaacaatttaagaaaat 4142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1052 - 1097
Target Start/End: Original strand, 7252252 - 7252297
Alignment:
Q  1052 ttttgtagggttgaattagactcaacccaaactctaagatgatatc 1097  Q
    |||||||||||||| |||| ||||||||||| ||||||||| ||||    
T  7252252 ttttgtagggttgagttaggctcaacccaaattctaagatggtatc 7252297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 21091706 - 21091747
Alignment:
Q  165 acggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||| |||||||| ||||||||||||||||||| |||||||    
T  21091706 acggacactgacacaccgacaccgctaataatttaagaaaat 21091747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 9e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 13349 - 13425
Alignment:
Q  131 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||||||||||  |||||||||||||||||||    
T  13349 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 13425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 9e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 132 - 287
Target Start/End: Original strand, 20122 - 20279
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atg 229  Q
    |||||||||||  |||||||| ||||||||| |||||| | |||||||||||||| ||||||||||||| |||||| | ||| |||| | |||||  | |    
T  20122 ctatgaagcacagatacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcac-ataattcagtgtaattacaag 20220  T
Q  230 tgtcggtgtggtgtcggtgtcggacatggctaattcgaggagt---gtccgtgcttcatag 287  Q
    |||| |||| |||||||||  ||||| | ||||| ||||||||   |||||||||||||||    
T  20221 tgtcagtgtcgtgtcggtg--ggacacgcctaatccgaggagtacagtccgtgcttcatag 20279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 9e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 21978 - 21902
Alignment:
Q  131 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||| |||||||| ||||| | | |||||| ||||||||||||||||  |||||||||||||||||||    
T  21978 actatgaagcacggatacggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatc 21902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-16; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 6427323 - 6427375
Alignment:
Q  155 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  6427323 cggacacggcacggacactgacacgccaacaccgctaataatttgagaaaatc 6427375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-16
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 40917716 - 40917776
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  40917716 acggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaatc 40917776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 398858 - 398799
Alignment:
Q  148 cggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatc 398799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 2896207 - 2896155
Alignment:
Q  155 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||||||||    
T  2896207 cggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatc 2896155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 286
Target Start/End: Complemental strand, 10572690 - 10572535
Alignment:
Q  140 cacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtg 237  Q
    |||| |||||||| ||||||||| || | | ||||||||||||||||| ||||||||||||||||||| | ||| |||  | |||||  |||||||||||    
T  10572690 cacggatacggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcac-ataattcggtgtaattaaatgtgtcggtg 10572592  T
Q  238 tggtgtcggtgtc--------ggacatggctaattcgaggagtgtccgtgcttcata 286  Q
    | |||| ||||||        ||||| | ||||||| ||||||||||||||||||||    
T  10572591 ttgtgttggtgtcaggcacgtggacacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 5376609 - 5376535
Alignment:
Q  131 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||||| ||||| |||| || |||||||||| |||||| ||| |||||||||||||||||||||||| |||||||    
T  5376609 actatgaggcacgtatacaga-tccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaat 5376535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 5927449 - 5927374
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||| ||||||| |||||||| ||||||||| |||||| ||||||||||  |||| ||||||||||||| ||||||    
T  5927449 ctattaagcacggatacggacaccggacacgacacggacactgacacgctaacactgctaataatttgaaaaaatc 5927374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 287
Target Start/End: Complemental strand, 48547991 - 48547938
Alignment:
Q  234 ggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
    ||||| |||||||||||||| | | |||||||||||||||||||||||||||||    
T  48547991 ggtgtcgtgtcggtgtcggatacgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 12443538 - 12443494
Alignment:
Q  163 gcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  12443538 gcacggatacggacacgccgacacagctaataatttgagaaaatc 12443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 17831601 - 17831565
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831601 actgacacgccgacaccgctaataatttgagaaaatc 17831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 36878450 - 36878486
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878450 actgacacgccgacaccgctaataatttgagaaaatc 36878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 1486796 - 1486703
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 246  Q
    ||||| ||| ||||||||||||||||| ||||| ||||||||||||| |||||| | ||| |||| | |||||||  |||||||||| |||||||    
T  1486796 ccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcac-ataattcagtgtaattataagtgtcggtgtcgtgtcgg 1486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 247
Target Start/End: Original strand, 38503285 - 38503386
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 244  Q
    |||||| | ||||| | |||||| ||| |||| ||||||||||||||||||||||||||||  ||||||||| | ||||  |||||||||||||  ||||    
T  38503285 acggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatc-atatatttcagtgtaattatatgtgtcggtgtcctgtc 38503383  T
Q  245 ggt 247  Q
    |||    
T  38503384 ggt 38503386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 48040558 - 48040503
Alignment:
Q  145 atacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 200  Q
    |||||||| ||||||||| |||||| |||||||||||||||| | |||||||||||    
T  48040558 atacggacaccggacacgacacggacactgacacgccgacacagataataatttga 48040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 1262856 - 1262933
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgt 232  Q
    ||||||||| |||| | || ||||||||||||| |||||||||||||||||||| | ||| |||| |||||||| ||||    
T  1262856 ccggacacgacacgaacacggacacgccgacacagctaataatttgagaaaatcac-ataattcaatataattaagtgt 1262933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 9709795 - 9709845
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||| ||||||| ||| |||||||||||||||||||||||||    
T  9709795 gacacgacacggacactgacatgcctacaccgctaataatttgagaaaatc 9709845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 34298411 - 34298461
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||| |||||||| |||||||| |||||||||||||||||||    
T  34298411 gacacgacacggaaactgacacaccgacaccactaataatttgagaaaatc 34298461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 39130876 - 39130802
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||||||| |||||||| ||||||||| || ||||| |||||||| |||||   ||||||||| |||||||    
T  39130876 ctatgaagcacggatacggacaccggacacgacatggatattgacacgctgacactattaataattttagaaaat 39130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 1043 - 1140
Target Start/End: Complemental strand, 19811043 - 19810946
Alignment:
Q  1043 acaagccgattttgtagggttgaattagactcaacccaaactctaagatgatatcggagtctatcctagatctgttgttggactgcccgcattgtcca 1140  Q
    |||||||| ||||||| |||||| |||| |  |||||||| | ||||||| |||| ||| |||||||||||||||||  || || ||||||| |||||    
T  19811043 acaagccggttttgtaaggttgacttaggccgaacccaaattttaagatggtatcagagactatcctagatctgttgcagggcttcccgcatcgtcca 19810946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 19562691 - 19562655
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||||||| ||||||||||||||||||||    
T  19562691 actgacacgccgacactgctaataatttgagaaaatc 19562655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 609528 - 609493
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||||||||||||||| ||||||||||||||||||    
T  609528 actgacacgccgacaccactaataatttgagaaaat 609493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 6415078 - 6415035
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||    
T  6415078 cacggacactgacacgccgacatcgctaattatttgagaaaatc 6415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 31014993 - 31015068
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||| | || ||| |||| |||| |||||  |||||| |||| |||| ||||||||||||||||||||    
T  31014993 ctatgaagcacggacacagacaccgggcacgacacgggcactgacgcgcctacacagctaataatttgagaaaatc 31015068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 46348460 - 46348417
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  46348460 cacggacactgacacgccgacacagctaataatttgaaaaaatc 46348417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 48450673 - 48450622
Alignment:
Q  155 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||||| |||||| ||||||||||| |||| ||||||||||||| |||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaat 48450622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 3490460 - 3490426
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaa 205  Q
    |||||||||||||||| ||||||||||||||||||    
T  3490460 actgacacgccgacactgctaataatttgagaaaa 3490426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 10475045 - 10475011
Alignment:
Q  173 tgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||||||||||||| |||||||||||    
T  10475045 tgacacgccgacaccgctaataacttgagaaaatc 10475011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 207
Target Start/End: Complemental strand, 15641130 - 15641064
Alignment:
Q  141 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||| ||||||  |||||| | |||||| ||||||| |||||||| ||||||||||| ||||||||    
T  15641130 acgaacacggacatcggacatgacacggacactgacatgccgacactgctaataatttaagaaaatc 15641064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 40285724 - 40285686
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaatcgc 209  Q
    |||||||| || |||||||||||||||||||||||||||    
T  40285724 actgacacaccaacaccgctaataatttgagaaaatcgc 40285686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 20157437 - 20157384
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||| |||||  ||||||||  |||||||||||||||| ||||||||||    
T  20157437 ccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatc 20157384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 21530681 - 21530714
Alignment:
Q  174 gacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||||| ||||||||||||||||||    
T  21530681 gacacgccgacaccgttaataatttgagaaaatc 21530714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 255
Target Start/End: Original strand, 25361881 - 25361960
Alignment:
Q  177 acgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggaca 255  Q
    ||||||||||| || |||||||||||||||| | ||| |||| | ||||  |||||||| |||| ||||||||||||||||    
T  25361881 acgccgacaccactgataatttgagaaaatcac-ataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggaca 25361960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 206
Target Start/End: Complemental strand, 41877534 - 41877505
Alignment:
Q  177 acgccgacaccgctaataatttgagaaaat 206  Q
    ||||||||||||||||||||||||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaat 41877505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000004; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000004
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 8383207 - 8383282
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||| |||||| | |||||| | ||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  8383207 ctatgtagcacggacacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatc 8383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 5441128 - 5441029
Alignment:
Q  145 atacggac-tccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtgtcggtgtggtgt 243  Q
    |||||||| |||||||||| ||| || |||||||||||| ||||||||| |||||||||||||| | ||| |||| |  |||||||||||||||| ||||    
T  5441128 atacggacatccggacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcac-ataattcaatggaattatgtgtcggtgttgtgt 5441030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 8039908 - 8039818
Alignment:
Q  168 gatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtcggtgtcggacatg 257  Q
    |||| ||||||||| ||||||||||||||||||||||||   |||| |||| | ||||  ||||||||||||| ||||||||||||||||||    
T  8039908 gatattgacacgccaacaccgctaataatttgagaaaat-tatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatg 8039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 24205135 - 24205076
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| ||||||||| |||||| |||||||||||||||| | |||||||||||||||||    
T  24205135 acggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaat 24205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 8842280 - 8842346
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataattt 198  Q
    |||||||||||| |||||||| ||||| ||| |||||| | ||||| ||||||||||||||||||||    
T  8842280 ctatgaagcacggatacggacaccggatacgacacggaaattgacatgccgacaccgctaataattt 8842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 5407325 - 5407261
Alignment:
Q  163 gcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 228  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| | ||| |||||| |||||||    
T  5407325 gcacggataccgacacgccgacaccgctaaaaatttgagaaaatcac-ataattcattgtaattat 5407261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 28917966 - 28918026
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||| |||||| |||||||||||||||  ||||||||||||| ||||||    
T  28917966 acggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatc 28918026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 4991061 - 4991002
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| ||| ||||| |||||| |||||||| ||||||||||||||| |||||||||||    
T  4991061 acggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaat 4991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 10335386 - 10335327
Alignment:
Q  141 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttga 200  Q
    ||||| |||||| ||||||||| |||||| ||||||||||||||||  ||||||||||||    
T  10335386 acgaacacggacaccggacacgacacggacactgacacgccgacacaactaataatttga 10335327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 25064859 - 25064981
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattatgtg 231  Q
    ||||||| ||||  ||| ||| ||||||||| ||| || | ||||||||||||||||||||| |||||| |||||| | ||| || | | ||||||||||    
T  25064859 ctatgaaacacgggtacagacaccggacacgacacagacattgacacgccgacaccgctaatgatttgaaaaaatcac-ataatttagtgtaattatgtg 25064957  T
Q  232 tcggtgtggtgtcggtgtcggaca 255  Q
    | ||| | |||| |||||||||||    
T  25064958 ttggtatcgtgttggtgtcggaca 25064981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 55401025 - 55401100
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||  |||||||| ||||| ||| |||||| ||||| ||||||||||  |||||||||||| ||||||    
T  55401025 ctatgaagcacagatacggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatc 55401100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 8587129 - 8587055
Alignment:
Q  133 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||  |||||||| ||||||| | |||||| ||||||||||||||||  ||| |||||||| ||||||    
T  8587129 tatgaagcacagatacggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatc 8587055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 156 - 206
Target Start/End: Original strand, 9800014 - 9800064
Alignment:
Q  156 ggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||||| |||| | ||||||||||||||||| ||||||||||||||||||    
T  9800014 ggacacgacacgtacactgacacgccgacacctctaataatttgagaaaat 9800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 32429488 - 32429414
Alignment:
Q  133 tatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||| |||||||| ||||||||  |||| | | |||||| |||||| |||||||||||| ||||||||    
T  32429488 tatgaagcacgtatacggacaccggacacaacacgaacattgacactccgacaacgctaataatttaagaaaatc 32429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 2620139 - 2620087
Alignment:
Q  155 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||| | |||| ||||||||||||||||| ||||| |||||||||||||    
T  2620139 cggacacgactcggacactgacacgccgacaccactaatcatttgagaaaatc 2620087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 15796388 - 15796328
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||| |||||| | |||||||||||||| | ||||||||||| ||||||    
T  15796388 acggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatc 15796328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 26492291 - 26492239
Alignment:
Q  155 cggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||| |||||| |||||||||||||||  ||||||||||||| ||||||    
T  26492291 cggacacgacacggacactgacacgccgacagagctaataatttgaaaaaatc 26492239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 203
Target Start/End: Original strand, 21720746 - 21720785
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaa 203  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  21720746 cacggacactgacacgccgacaccgataataatttgagaa 21720785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 289
Target Start/End: Complemental strand, 4466576 - 4466538
Alignment:
Q  251 ggacatggctaattcgaggagtgtccgtgcttcatagtt 289  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  4466576 ggacacggcttattcgaggagtgtccgtgcttcatagtt 4466538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 289
Target Start/End: Complemental strand, 5440995 - 5440965
Alignment:
Q  259 ctaattcgaggagtgtccgtgcttcatagtt 289  Q
    |||||||||||||||||||||||||||||||    
T  5440995 ctaattcgaggagtgtccgtgcttcatagtt 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 12674585 - 12674535
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||| | |||||| ||||||| ||||||||||||||||||||    
T  12674585 gacacgacacggacattgacacaccgacactgctaataatttgagaaaatc 12674535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 289
Target Start/End: Original strand, 13807237 - 13807275
Alignment:
Q  251 ggacatggctaattcgaggagtgtccgtgcttcatagtt 289  Q
    ||||||| ||||||||||||||||||||| |||||||||    
T  13807237 ggacatgcctaattcgaggagtgtccgtgtttcatagtt 13807275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 14223962 - 14223889
Alignment:
Q  131 actatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    ||||||||||||||| || ||| | ||||||| ||| || || ||||||||||||| | ||||||||||||||||    
T  14223962 actatgaagcacgaacacagacac-ggacacgacacagacaccgacacgccgacacagataataatttgagaaaa 14223889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 1052 - 1097
Target Start/End: Complemental strand, 1348913 - 1348868
Alignment:
Q  1052 ttttgtagggttgaattagactcaacccaaactctaagatgatatc 1097  Q
    ||||||| |||||| |||||||||||||||| | ||||||||||||    
T  1348913 ttttgtatggttgagttagactcaacccaaattttaagatgatatc 1348868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 3865633 - 3865592
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    |||||| |||||||||||||||| ||||||||||||| ||||    
T  3865633 cacggacactgacacgccgacacagctaataatttgaaaaaa 3865592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 12703989 - 12704030
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    ||||||||  |||||||||||||| |||||||||||||||||    
T  12703989 cacggatatggacacgccgacaccactaataatttgagaaaa 12704030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 34307846 - 34307794
Alignment:
Q  175 acacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat 228  Q
    |||||| |||||||||||||||||||||||||| | |||||||| | |||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcac-atatttcagtgtaattat 34307794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000005
Query Start/End: Original strand, 141 - 287
Target Start/End: Original strand, 21002 - 21149
Alignment:
Q  141 acgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgt 238  Q
    ||||| |||||| || |||||| |||||| ||||||| || ||||| | |||||||||||||||||| | |||  ||  ||||||  ||||||||||| |    
T  21002 acgaacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcac-ataagtcggtataattatatgtgtcggtat 21100  T
Q  239 ggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
     ||||||||||| |||| | ||||| |||| ||| ||||||||||||||    
T  21101 cgtgtcggtgtcagacacgcctaatccgagaagtatccgtgcttcatag 21149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 21217 - 21278
Alignment:
Q  226 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||||||| ||||||||||||||    
T  21217 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgaggagtatccgtgcttcatag 21278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 287
Target Start/End: Original strand, 21346 - 21407
Alignment:
Q  226 tatgtgtcggtgtggtgtcggtgtcggacatggctaattcgaggagtgtccgtgcttcatag 287  Q
    ||||||||||| | ||||||||||| |||| | ||||| |||| |||||| |||||||||||    
T  21346 tatgtgtcggtatcgtgtcggtgtcagacacgcctaatccgagaagtgtctgtgcttcatag 21407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 8763 - 8823
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||||||| ||||||    
T  8763 acggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 225362 - 225303
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| ||||||||| |||||| |||||||||||||||| | |||||||||||||||||    
T  225362 acggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaat 225303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000009
Query Start/End: Original strand, 147 - 255
Target Start/End: Original strand, 241559 - 241668
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtc 244  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||||||  |||||| | ||| || | | |||||||  |||||||||| ||||     
T  241559 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcac-ataatttagtgtaattatgagtgtcggtgtcgtgtt 241657  T
Q  245 ggtgtcggaca 255  Q
    |||||||||||    
T  241658 ggtgtcggaca 241668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 92790 - 92831
Alignment:
Q  165 acggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaat 92831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 172 - 257
Target Start/End: Original strand, 53170 - 53256
Alignment:
Q  172 ctgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcggtgtcggacatg 257  Q
    |||||||||||| ||||| ||||||||||||||||| | ||| |||| | |||||||  |||||||||  ||||||||||||||||||    
T  53170 ctgacacgccgataccgccaataatttgagaaaatcac-ataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatg 53256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 178925 - 178853
Alignment:
Q  135 tgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||| |||  ||| ||||||||| |||||| ||||||||||||||||  |||||||||||| ||||||    
T  178925 tgaagcacggatattgacaccggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatc 178853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 192325 - 192284
Alignment:
Q  165 acggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  192325 acggacactgacacgccgacaccgttaataatttgagaaaat 192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000005; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 23293080 - 23293020
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||| |||||| | |||||||||||||| ||||||||||||| ||||||    
T  23293080 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatc 23293020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.0000000002
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 35723455 - 35723420
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaat 206  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723455 actgacacgccgacaccgctaataatttgagaaaat 35723420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000008
Query Start/End: Original strand, 171 - 205
Target Start/End: Complemental strand, 17345485 - 17345451
Alignment:
Q  171 actgacacgccgacaccgctaataatttgagaaaa 205  Q
    |||||||||||||||||||||||||||||||||||    
T  17345485 actgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 847918 - 847975
Alignment:
Q  149 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||| ||||||||| ||| || |||||||||||||  |||||||||||||||||||||    
T  847918 ggaccccggacacgacacagacactgacacgccgatgccgctaataatttgagaaaat 847975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 36635296 - 36635349
Alignment:
Q  154 ccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||| | |||| ||||||||||| ||||| |||||||||||||||||||    
T  36635296 ccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatc 36635349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 24343472 - 24343531
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| ||||||||| ||||||  | ||||||||||||| | |||||||||||||||||    
T  24343472 acggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaat 24343531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 255
Target Start/End: Complemental strand, 30982967 - 30982863
Alignment:
Q  149 ggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataattat--gtgtcggtgtggtgtcgg 246  Q
    |||| ||||| ||| |||||| || ||||||||   ||||||||| ||||||||||||| | |||||||| | |||||||  |||||||||| |||||||    
T  30982967 ggacaccggatacgacacggacacagacacgcc---accgctaatgatttgagaaaatcac-atatttcagtgtaattataagtgtcggtgtcgtgtcgg 30982872  T
Q  247 tgtcggaca 255  Q
    |||| ||||    
T  30982871 tgtcagaca 30982863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 7012048 - 7012090
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| || ||||||||||||||| |||||||||||||||||    
T  7012048 cacggacaccgacacgccgacaccgataataatttgagaaaat 7012090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 7670625 - 7670709
Alignment:
Q  126 catatactatgaagcacgaatacggactccggacacggcacggatactgaca---cgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||||||||||||||| |||  ||||||||| | |||| |||||||   ||||||||  ||||||| ||||||||||||    
T  7670625 catatagtatgaagcacgaatatggataccggacacgacgcggaaactgacacgtcgccgacattgctaatagtttgagaaaatc 7670709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 20521933 - 20521883
Alignment:
Q  157 gacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||| ||||||    
T  20521933 gacacgacacggacactgacacgccgataccgataataatttgataaaatc 20521883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 20633450 - 20633508
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    |||||| || ||||||  ||||| ||||||||| |||||||||||||||||||| ||||    
T  20633450 acggacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaaa 20633508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 287
Target Start/End: Original strand, 30298928 - 30299048
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggcta 261  Q
    |||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |||    
T  30298928 cacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtcta 30299022  T
Q  262 attcgaggagtgtccgtgcttcatag 287  Q
    || |||||||||||||||||||||||    
T  30299023 atccgaggagtgtccgtgcttcatag 30299048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 287
Target Start/End: Original strand, 30327796 - 30327916
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataatt--atgtgtcggtgtggtgtcggtgtcggacatggcta 261  Q
    |||||| |||||||||||||||| ||||||||||||| ||||  |  ||| |||| | |||||  | |||||||||| ||| ||     ||||| | |||    
T  30327796 cacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccg-----ggacacgtcta 30327890  T
Q  262 attcgaggagtgtccgtgcttcatag 287  Q
    || |||||||||||||||||||||||    
T  30327891 atccgaggagtgtccgtgcttcatag 30327916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 40613441 - 40613475
Alignment:
Q  173 tgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||||||||||||||||||| ||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatc 40613475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 205
Target Start/End: Original strand, 28084475 - 28084544
Alignment:
Q  136 gaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaa 205  Q
    |||||||  |||||||| ||||||||| ||| ||  ||||||||||||||| ||||| ||||||| ||||    
T  28084475 gaagcacagatacggacaccggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaa 28084544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 33; Significance: 0.00000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 556 - 496
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| ||| ||||| |||||| ||||| |||||||||| ||||||||||||| ||||||    
T  556 acggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatc 496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 33; Significance: 0.00000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 17979 - 17903
Alignment:
Q  132 ctatgaagcacgaatacggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaatcg 208  Q
    |||||||||||| |||||||| | |||||||  ||  | ||  ||||||| ||||||||||||||||||||||||||    
T  17979 ctatgaagcacggatacggacactggacacgatacaaacaccaacacgcctacaccgctaataatttgagaaaatcg 17903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 32; Significance: 0.00000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 3281 - 3340
Alignment:
Q  147 acggactccggacacggcacggatactgacacgccgacaccgctaataatttgagaaaat 206  Q
    |||||| ||||||||| |||||||||||||||| |||||  ||||| ||||| |||||||    
T  3281 acggacaccggacacgacacggatactgacacgtcgacaatgctaacaattttagaaaat 3340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.00000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 51793 - 51836
Alignment:
Q  164 cacggatactgacacgccgacaccgctaataatttgagaaaatc 207  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||    
T  51793 cacggacactgacacgccgacacagctaataatttgaaaaaatc 51836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 30; Significance: 0.0000008; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 1636 - 1669
Alignment:
Q  174 gacacgccgacaccgctaataatttgagaaaatc 207  Q
    ||||||||||||||| ||||||||||||||||||    
T  1636 gacacgccgacaccgttaataatttgagaaaatc 1669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 244
Target Start/End: Original strand, 28830 - 28913
Alignment:
Q  162 ggcacggatactgacacgccgacaccgctaataatttgagaaaatcgctatatttcattataat--tatgtgtcggtgtggtgtc 244  Q
    |||||| | ||| |||||||||||||| ||||||||| |||||||||| ||| |||| | ||||  ||||||||||||| |||||    
T  28830 ggcacgaacactaacacgccgacaccgttaataatttaagaaaatcgc-ataattcaatgtaattatatgtgtcggtgttgtgtc 28913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 946 times since January 2019
Visitors: 1288