View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0084_2D_low_34 (Length: 337)
Name: NF0084_2D_low_34
Description: NF0084_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0084_2D_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 79 - 322
Target Start/End: Complemental strand, 40757604 - 40757361
Alignment:
| Q |
79 |
tatagagtatagatgtttgaaaattttaaattatataacaaactcaacaaacccatatgtattcaacatcataatcatattcatactctattgagttact |
178 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40757604 |
tatagaatatagatgtttgaaaattttaaattatataacaaactcaacaaacccatatgtattcaacatcataatcatattcatactctattgagttact |
40757505 |
T |
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| Q |
179 |
tcaaattcacaccaactcattatcagtcttgttgtaaacacaaagggatctattttagaggtgtttgtttcacctaggaaaaataccaccggcttatatt |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40757504 |
tcaaattcacaccaactcattatcagtcttgttgtaaacacaaagggatctattttagaggtgtttgtttcacctaggaaaaataccaccggcttatatt |
40757405 |
T |
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| Q |
279 |
atgtcacaagatctaggttctctcatttcaccttatatgatgtc |
322 |
Q |
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||||||||||||| |||||||||||||||||||||||| ||||| |
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| T |
40757404 |
atgtcacaagatccaggttctctcatttcaccttatattatgtc |
40757361 |
T |
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