View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0087_low_7 (Length: 367)
Name: NF0087_low_7
Description: NF0087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0087_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 52464701 - 52464576
Alignment:
| Q |
88 |
acagaacccaaaaccccacctatagaactggtcaagtcggatccgatccacgattgtgattctcatgatgaggagaatagcaaaccgatgatgaagaaat |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
52464701 |
acagaacccaaaaccccacctatagaactggtcaagtcggatccgatccacgattgtgattctgatgatgaggagaatagcaaaccgatgatgaagaaat |
52464602 |
T |
|
| Q |
188 |
cagcgagcgagaaagagtgttcaatg |
213 |
Q |
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|||||||||||||||||||||||||| |
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| T |
52464601 |
cagcgagcgagaaagagtgttcaatg |
52464576 |
T |
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