View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0088_low_23 (Length: 300)
Name: NF0088_low_23
Description: NF0088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0088_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 43925710 - 43925910
Alignment:
| Q |
1 |
gtccaccctgaaatagaatatcatagtacatgaacaaaataactttcacataatcatttcttatttggtcatatctaacctaaaagtctcaaaaaccatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43925710 |
gtccaccctgaaatagaatatcatagtacatgaacaaaataactttcacataatcatttcttatttggtcatatctaacctaaaagtctcaaaaaccatg |
43925809 |
T |
|
| Q |
101 |
aagcaagaaactacataccataccatatagcgtgggttggtttattcaaataatagacattatactaattttcaacattagtggtcctacttgattatta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43925810 |
aagcaagaaactacataccataccatatagcgtgggttggtttattcaaataatagacattatactaattttcaacattagtggtcctacttgattatta |
43925909 |
T |
|
| Q |
201 |
g |
201 |
Q |
| |
|
| |
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| T |
43925910 |
g |
43925910 |
T |
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