View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0088_low_26 (Length: 293)

Name: NF0088_low_26
Description: NF0088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0088_low_26
NF0088_low_26
[»] chr4 (44 HSPs)
chr4 (91-235)||(6641797-6641941)
chr4 (91-235)||(40846212-40846359)
chr4 (122-235)||(37435388-37435501)
chr4 (122-239)||(16632585-16632702)
chr4 (91-206)||(55380403-55380519)
chr4 (122-206)||(56034719-56034803)
chr4 (122-235)||(45833539-45833654)
chr4 (122-229)||(15139372-15139482)
chr4 (91-185)||(23750633-23750728)
chr4 (122-207)||(23123576-23123663)
chr4 (121-192)||(22089732-22089802)
chr4 (141-235)||(14604759-14604853)
chr4 (102-183)||(41114676-41114757)
chr4 (122-206)||(19620944-19621027)
chr4 (125-235)||(12811029-12811141)
chr4 (102-174)||(11915824-11915896)
chr4 (102-180)||(17787962-17788040)
chr4 (134-192)||(19884858-19884916)
chr4 (122-235)||(12601246-12601359)
chr4 (122-159)||(37985541-37985578)
chr4 (51-87)||(10692841-10692877)
chr4 (51-87)||(10906607-10906643)
chr4 (51-87)||(16853493-16853529)
chr4 (122-207)||(29680423-29680510)
chr4 (56-87)||(1672384-1672415)
chr4 (56-87)||(1674859-1674890)
chr4 (134-177)||(10073091-10073134)
chr4 (56-87)||(31266811-31266842)
chr4 (122-192)||(14904252-14904322)
chr4 (53-87)||(29121362-29121396)
chr4 (54-87)||(16848540-16848573)
chr4 (51-87)||(3105504-3105540)
chr4 (51-87)||(6517475-6517511)
chr4 (51-87)||(6641674-6641710)
chr4 (51-87)||(8105628-8105663)
chr4 (51-87)||(9751625-9751661)
chr4 (51-87)||(14604992-14605028)
chr4 (122-206)||(17247388-17247472)
chr4 (51-87)||(17398759-17398795)
chr4 (133-177)||(19911791-19911835)
chr4 (51-87)||(22190836-22190872)
chr4 (51-87)||(25651189-25651224)
chr4 (51-87)||(37435620-37435656)
chr4 (51-87)||(40860657-40860693)
[»] chr3 (56 HSPs)
chr3 (79-206)||(16032631-16032757)
chr3 (91-235)||(20725205-20725349)
chr3 (98-183)||(12388821-12388906)
chr3 (122-232)||(29951335-29951447)
chr3 (122-232)||(30000489-30000601)
chr3 (122-235)||(6090882-6090997)
chr3 (91-183)||(19249361-19249453)
chr3 (122-235)||(52920555-52920670)
chr3 (122-235)||(14392900-14393013)
chr3 (122-206)||(12963010-12963094)
chr3 (122-237)||(31303536-31303653)
chr3 (122-192)||(2561338-2561408)
chr3 (122-233)||(49642658-49642771)
chr3 (122-239)||(18121511-18121631)
chr3 (122-235)||(13948486-13948601)
chr3 (122-206)||(17238847-17238931)
chr3 (122-206)||(37467483-37467567)
chr3 (122-235)||(15903349-15903464)
chr3 (102-173)||(12968435-12968506)
chr3 (188-235)||(16199705-16199752)
chr3 (147-235)||(20646330-20646420)
chr3 (136-207)||(49553413-49553484)
chr3 (122-192)||(14969477-14969547)
chr3 (102-180)||(26417631-26417709)
chr3 (122-192)||(28582256-28582326)
chr3 (122-159)||(13824219-13824256)
chr3 (51-87)||(2561183-2561219)
chr3 (51-87)||(6090727-6090763)
chr3 (51-87)||(11868264-11868300)
chr3 (51-87)||(12726358-12726394)
chr3 (51-87)||(16032520-16032556)
chr3 (122-174)||(25398230-25398282)
chr3 (51-87)||(25398383-25398419)
chr3 (51-87)||(40799869-40799905)
chr3 (51-87)||(53056855-53056891)
chr3 (188-235)||(12388752-12388799)
chr3 (52-87)||(12389000-12389035)
chr3 (51-86)||(22140759-22140794)
chr3 (57-87)||(8740135-8740165)
chr3 (57-87)||(11164026-11164056)
chr3 (102-152)||(23538146-23538196)
chr3 (122-159)||(38177615-38177652)
chr3 (122-206)||(12726155-12726239)
chr3 (133-206)||(16658541-16658616)
chr3 (51-87)||(18121750-18121786)
chr3 (122-206)||(18142677-18142761)
chr3 (51-87)||(18142880-18142916)
chr3 (51-87)||(21605782-21605818)
chr3 (51-87)||(21636798-21636834)
chr3 (51-87)||(24775662-24775698)
chr3 (51-87)||(29855404-29855440)
chr3 (51-87)||(30054345-30054381)
chr3 (51-87)||(47207701-47207737)
chr3 (122-206)||(47207857-47207941)
chr3 (51-87)||(47405549-47405585)
chr3 (51-87)||(49553617-49553653)
[»] chr8 (41 HSPs)
chr8 (91-239)||(19707617-19707765)
chr8 (122-229)||(17701888-17701997)
chr8 (133-230)||(17267627-17267724)
chr8 (122-207)||(33083000-33083085)
chr8 (122-239)||(16189127-16189244)
chr8 (122-235)||(20382289-20382402)
chr8 (122-235)||(23263506-23263620)
chr8 (122-235)||(16681198-16681311)
chr8 (123-239)||(17525619-17525736)
chr8 (122-232)||(22745630-22745742)
chr8 (122-192)||(18321097-18321167)
chr8 (91-174)||(43645007-43645090)
chr8 (122-235)||(39693678-39693793)
chr8 (134-206)||(18719156-18719228)
chr8 (122-234)||(19943379-19943494)
chr8 (122-235)||(24646481-24646596)
chr8 (122-206)||(21933026-21933112)
chr8 (122-234)||(16207449-16207563)
chr8 (102-181)||(22461588-22461667)
chr8 (122-192)||(17441746-17441816)
chr8 (121-179)||(18722597-18722655)
chr8 (121-179)||(18730942-18731000)
chr8 (51-87)||(1237625-1237661)
chr8 (51-87)||(17797410-17797446)
chr8 (134-206)||(18679970-18680042)
chr8 (122-206)||(23185150-23185234)
chr8 (122-206)||(30421352-30421436)
chr8 (51-87)||(45538566-45538602)
chr8 (122-206)||(19156339-19156425)
chr8 (52-87)||(30421556-30421591)
chr8 (51-87)||(6407714-6407750)
chr8 (51-87)||(9320557-9320592)
chr8 (51-87)||(14989578-14989614)
chr8 (51-87)||(15336215-15336251)
chr8 (51-87)||(15425280-15425316)
chr8 (51-87)||(15516584-15516620)
chr8 (51-87)||(16207294-16207330)
chr8 (51-87)||(18151773-18151809)
chr8 (51-87)||(23185353-23185389)
chr8 (51-87)||(36105183-36105219)
chr8 (51-87)||(40845514-40845550)
[»] scaffold0047 (1 HSPs)
scaffold0047 (91-210)||(10022-10141)
[»] chr5 (34 HSPs)
chr5 (91-235)||(642583-642729)
chr5 (121-207)||(21198910-21198996)
chr5 (91-235)||(21099580-21099726)
chr5 (91-239)||(23881182-23881332)
chr5 (122-235)||(7745570-7745683)
chr5 (122-206)||(23412880-23412964)
chr5 (91-183)||(25096753-25096845)
chr5 (91-183)||(25154723-25154815)
chr5 (122-235)||(17815115-17815228)
chr5 (91-209)||(6499354-6499473)
chr5 (134-206)||(9398649-9398723)
chr5 (91-207)||(21072144-21072262)
chr5 (122-235)||(19536177-19536290)
chr5 (122-206)||(89328-89412)
chr5 (122-206)||(6512337-6512421)
chr5 (122-206)||(21910703-21910787)
chr5 (122-185)||(20551041-20551105)
chr5 (122-177)||(13545455-13545510)
chr5 (51-87)||(4887014-4887050)
chr5 (51-87)||(20550887-20550923)
chr5 (51-87)||(33933259-33933295)
chr5 (172-235)||(12352693-12352758)
chr5 (51-87)||(7745802-7745838)
chr5 (51-87)||(9088961-9088997)
chr5 (51-87)||(10848765-10848801)
chr5 (51-87)||(11993880-11993916)
chr5 (51-87)||(14086648-14086684)
chr5 (51-87)||(15516962-15516997)
chr5 (51-87)||(28139599-28139635)
chr5 (51-87)||(30115946-30115982)
chr5 (51-87)||(30742973-30743008)
chr5 (51-87)||(33022656-33022692)
chr5 (51-87)||(35932115-35932151)
chr5 (51-87)||(42243673-42243708)
[»] chr2 (50 HSPs)
chr2 (91-210)||(23595437-23595556)
chr2 (102-235)||(22272257-22272390)
chr2 (101-210)||(41121587-41121696)
chr2 (91-232)||(22454833-22454977)
chr2 (91-178)||(25189511-25189598)
chr2 (122-235)||(10009591-10009704)
chr2 (122-210)||(19540561-19540649)
chr2 (122-231)||(7609107-7609216)
chr2 (122-235)||(22260551-22260664)
chr2 (122-235)||(9015211-9015325)
chr2 (122-235)||(22187942-22188057)
chr2 (122-235)||(25037099-25037214)
chr2 (122-235)||(25041206-25041321)
chr2 (102-210)||(44881291-44881399)
chr2 (91-210)||(23184180-23184295)
chr2 (91-206)||(24377214-24377332)
chr2 (122-232)||(24850508-24850621)
chr2 (102-183)||(18430835-18430916)
chr2 (122-235)||(21537088-21537203)
chr2 (122-235)||(23235152-23235267)
chr2 (122-206)||(25829279-25829363)
chr2 (122-206)||(18376775-18376861)
chr2 (124-235)||(24576183-24576294)
chr2 (102-181)||(26618998-26619077)
chr2 (134-206)||(39037511-39037585)
chr2 (122-229)||(20568596-20568705)
chr2 (122-235)||(38781544-38781657)
chr2 (102-182)||(19115207-19115287)
chr2 (122-206)||(28140491-28140574)
chr2 (122-235)||(30667134-30667249)
chr2 (122-177)||(13963878-13963933)
chr2 (102-180)||(18702862-18702940)
chr2 (51-87)||(28711772-28711808)
chr2 (122-206)||(30621361-30621447)
chr2 (122-206)||(30623982-30624068)
chr2 (148-235)||(40782642-40782729)
chr2 (57-87)||(26867243-26867273)
chr2 (57-87)||(26879832-26879862)
chr2 (127-192)||(1586929-1586992)
chr2 (51-87)||(6392624-6392659)
chr2 (51-87)||(22802451-22802486)
chr2 (51-87)||(24275192-24275228)
chr2 (51-87)||(28550992-28551028)
chr2 (51-87)||(31328040-31328075)
chr2 (51-87)||(31334761-31334796)
chr2 (51-87)||(31800961-31800997)
chr2 (51-87)||(31968117-31968153)
chr2 (51-87)||(33074216-33074252)
chr2 (51-87)||(41121793-41121829)
chr2 (51-87)||(44840424-44840460)
[»] chr7 (56 HSPs)
chr7 (122-239)||(13692489-13692606)
chr7 (121-235)||(16316455-16316569)
chr7 (91-183)||(13893949-13894041)
chr7 (91-206)||(39284490-39284607)
chr7 (122-239)||(12366642-12366759)
chr7 (122-235)||(21283271-21283384)
chr7 (122-228)||(11793054-11793162)
chr7 (122-235)||(22577919-22578032)
chr7 (91-207)||(29935285-29935401)
chr7 (123-206)||(24788289-24788372)
chr7 (122-235)||(28409186-28409300)
chr7 (122-232)||(10883072-10883184)
chr7 (134-198)||(41842209-41842272)
chr7 (122-185)||(4494653-4494716)
chr7 (120-185)||(9098207-9098272)
chr7 (142-235)||(13260521-13260614)
chr7 (122-206)||(13648876-13648960)
chr7 (91-183)||(19236994-19237086)
chr7 (122-206)||(21695548-21695634)
chr7 (123-192)||(13302958-13303027)
chr7 (122-206)||(44467211-44467298)
chr7 (91-160)||(13032045-13032115)
chr7 (122-206)||(30945285-30945367)
chr7 (123-235)||(9069710-9069825)
chr7 (91-210)||(13018428-13018548)
chr7 (102-162)||(13880715-13880775)
chr7 (122-235)||(15468063-15468178)
chr7 (136-206)||(331806-331877)
chr7 (122-228)||(11319552-11319660)
chr7 (133-206)||(21692445-21692517)
chr7 (51-87)||(4821466-4821502)
chr7 (51-87)||(22578151-22578187)
chr7 (51-87)||(27871710-27871746)
chr7 (122-185)||(30944273-30944334)
chr7 (51-87)||(30944453-30944489)
chr7 (51-87)||(44467056-44467092)
chr7 (51-86)||(33691843-33691878)
chr7 (165-235)||(9098140-9098210)
chr7 (122-192)||(13137836-13137906)
chr7 (122-156)||(13730652-13730686)
chr7 (122-192)||(15088667-15088737)
chr7 (122-192)||(33691653-33691723)
chr7 (122-159)||(2500185-2500222)
chr7 (54-87)||(14426542-14426575)
chr7 (54-87)||(21283503-21283536)
chr7 (54-87)||(24788136-24788169)
chr7 (54-87)||(28409034-28409067)
chr7 (122-170)||(5000784-5000832)
chr7 (51-87)||(8182922-8182958)
chr7 (51-87)||(9069554-9069590)
chr7 (142-235)||(14193241-14193336)
chr7 (51-87)||(16112014-16112050)
chr7 (187-235)||(19236908-19236956)
chr7 (51-87)||(24794845-24794881)
chr7 (122-206)||(48236829-48236913)
chr7 (51-87)||(48237032-48237068)
[»] scaffold0364 (1 HSPs)
scaffold0364 (102-206)||(6137-6241)
[»] scaffold0025 (1 HSPs)
scaffold0025 (121-235)||(74717-74831)
[»] scaffold0056 (3 HSPs)
scaffold0056 (102-235)||(36032-36165)
scaffold0056 (51-87)||(34883-34919)
scaffold0056 (54-87)||(25744-25777)
[»] chr1 (44 HSPs)
chr1 (122-239)||(33256164-33256281)
chr1 (122-239)||(33276336-33276453)
chr1 (122-235)||(48704354-48704467)
chr1 (122-235)||(19717674-19717787)
chr1 (122-206)||(12284573-12284657)
chr1 (121-206)||(17024811-17024896)
chr1 (122-239)||(22599993-22600112)
chr1 (122-235)||(2268678-2268792)
chr1 (91-168)||(12613700-12613777)
chr1 (122-235)||(20954288-20954403)
chr1 (122-192)||(22154007-22154077)
chr1 (122-206)||(10757571-10757656)
chr1 (122-235)||(38282716-38282831)
chr1 (91-235)||(21191694-21191827)
chr1 (122-239)||(23036340-23036457)
chr1 (122-235)||(35401959-35402072)
chr1 (136-192)||(26701989-26702045)
chr1 (122-213)||(1578017-1578108)
chr1 (123-177)||(28492279-28492333)
chr1 (122-177)||(1900495-1900550)
chr1 (122-206)||(21028943-21029029)
chr1 (165-206)||(12284648-12284689)
chr1 (134-206)||(30893254-30893327)
chr1 (51-87)||(1900340-1900376)
chr1 (187-235)||(12613610-12613658)
chr1 (51-87)||(22153852-22153888)
chr1 (51-87)||(25448615-25448651)
chr1 (51-87)||(35040161-35040197)
chr1 (51-87)||(36134185-36134221)
chr1 (122-174)||(36134339-36134391)
chr1 (57-87)||(20195744-20195774)
chr1 (127-213)||(7309973-7310061)
chr1 (122-154)||(2267239-2267271)
chr1 (51-87)||(2268526-2268562)
chr1 (51-87)||(2327489-2327525)
chr1 (51-87)||(21121113-21121149)
chr1 (51-87)||(21702809-21702845)
chr1 (51-87)||(22427406-22427442)
chr1 (51-87)||(22600231-22600267)
chr1 (51-87)||(37642243-37642279)
chr1 (51-87)||(38282562-38282598)
chr1 (51-87)||(39201041-39201077)
chr1 (51-87)||(46088984-46089020)
chr1 (51-87)||(48570280-48570316)
[»] scaffold0004 (5 HSPs)
scaffold0004 (134-235)||(220400-220503)
scaffold0004 (122-235)||(377404-377519)
scaffold0004 (91-183)||(244185-244276)
scaffold0004 (181-235)||(244098-244152)
scaffold0004 (51-87)||(211394-211430)
[»] scaffold0359 (1 HSPs)
scaffold0359 (122-235)||(5537-5650)
[»] scaffold0026 (4 HSPs)
scaffold0026 (122-235)||(60167-60280)
scaffold0026 (102-170)||(151783-151851)
scaffold0026 (122-206)||(8077-8161)
scaffold0026 (162-235)||(115712-115785)
[»] chr6 (34 HSPs)
chr6 (102-235)||(19470800-19470933)
chr6 (91-175)||(10640364-10640448)
chr6 (122-235)||(13435683-13435798)
chr6 (122-235)||(23284715-23284830)
chr6 (122-207)||(19624130-19624215)
chr6 (122-235)||(13602323-13602438)
chr6 (122-239)||(15531503-15531622)
chr6 (122-235)||(9717994-9718109)
chr6 (122-206)||(14100355-14100438)
chr6 (122-206)||(15302351-15302435)
chr6 (122-174)||(15987385-15987437)
chr6 (122-201)||(24116979-24117059)
chr6 (122-235)||(25597630-25597745)
chr6 (125-203)||(19688920-19688996)
chr6 (134-205)||(29918179-29918250)
chr6 (122-177)||(32544416-32544471)
chr6 (141-235)||(26943734-26943828)
chr6 (122-206)||(12715333-12715418)
chr6 (122-192)||(20112627-20112698)
chr6 (122-206)||(26972140-26972226)
chr6 (122-174)||(21625251-21625303)
chr6 (53-87)||(9717841-9717875)
chr6 (54-87)||(15954702-15954735)
chr6 (51-87)||(14100557-14100592)
chr6 (51-87)||(15531741-15531777)
chr6 (51-87)||(16265267-16265303)
chr6 (51-87)||(16877209-16877245)
chr6 (51-87)||(19066135-19066171)
chr6 (148-192)||(19086325-19086369)
chr6 (51-87)||(20488035-20488071)
chr6 (51-87)||(22076524-22076560)
chr6 (51-87)||(22802137-22802173)
chr6 (51-87)||(29918013-29918049)
chr6 (51-87)||(32544261-32544297)
[»] scaffold0064 (2 HSPs)
scaffold0064 (91-180)||(43822-43911)
scaffold0064 (181-235)||(43750-43804)
[»] scaffold0210 (2 HSPs)
scaffold0210 (122-206)||(1811-1895)
scaffold0210 (51-87)||(1656-1692)
[»] scaffold0083 (1 HSPs)
scaffold0083 (122-235)||(25820-25935)
[»] scaffold0324 (1 HSPs)
scaffold0324 (102-191)||(10086-10176)
[»] scaffold0081 (1 HSPs)
scaffold0081 (91-181)||(40756-40846)
[»] scaffold0337 (1 HSPs)
scaffold0337 (122-235)||(14799-14912)
[»] scaffold0861 (1 HSPs)
scaffold0861 (122-235)||(4792-4907)
[»] scaffold0171 (2 HSPs)
scaffold0171 (122-206)||(27305-27389)
scaffold0171 (51-87)||(27508-27544)
[»] scaffold0035 (2 HSPs)
scaffold0035 (123-235)||(19319-19431)
scaffold0035 (51-87)||(99284-99320)
[»] scaffold0022 (6 HSPs)
scaffold0022 (91-185)||(159174-159268)
scaffold0022 (122-206)||(39576-39662)
scaffold0022 (122-206)||(137636-137722)
scaffold0022 (188-235)||(159288-159335)
scaffold0022 (51-87)||(37398-37434)
scaffold0022 (51-87)||(135458-135494)
[»] scaffold1434 (1 HSPs)
scaffold1434 (122-235)||(633-746)
[»] scaffold0065 (1 HSPs)
scaffold0065 (122-235)||(1841-1954)
[»] scaffold0040 (1 HSPs)
scaffold0040 (102-183)||(1421-1502)
[»] scaffold0485 (1 HSPs)
scaffold0485 (150-235)||(9253-9338)
[»] scaffold0334 (1 HSPs)
scaffold0334 (122-235)||(9946-10059)
[»] scaffold0120 (4 HSPs)
scaffold0120 (122-235)||(36620-36735)
scaffold0120 (122-235)||(42270-42385)
scaffold0120 (51-87)||(36854-36890)
scaffold0120 (51-87)||(42115-42151)
[»] scaffold0227 (2 HSPs)
scaffold0227 (122-206)||(22827-22913)
scaffold0227 (51-87)||(22672-22708)
[»] scaffold0161 (1 HSPs)
scaffold0161 (122-192)||(9997-10068)
[»] scaffold0005 (2 HSPs)
scaffold0005 (141-235)||(212525-212619)
scaffold0005 (51-87)||(212350-212386)
[»] scaffold0771 (1 HSPs)
scaffold0771 (122-235)||(626-741)
[»] scaffold0479 (2 HSPs)
scaffold0479 (122-206)||(10120-10204)
scaffold0479 (51-87)||(9965-10001)
[»] scaffold0290 (1 HSPs)
scaffold0290 (122-235)||(18466-18581)
[»] scaffold0146 (1 HSPs)
scaffold0146 (122-206)||(15268-15352)
[»] scaffold0116 (2 HSPs)
scaffold0116 (122-235)||(20816-20931)
scaffold0116 (51-87)||(21050-21086)
[»] scaffold0023 (1 HSPs)
scaffold0023 (123-207)||(103724-103808)
[»] scaffold0273 (1 HSPs)
scaffold0273 (102-180)||(5756-5834)
[»] scaffold0084 (2 HSPs)
scaffold0084 (122-207)||(49483-49570)
scaffold0084 (122-177)||(32636-32691)
[»] scaffold0251 (1 HSPs)
scaffold0251 (122-206)||(7854-7940)
[»] scaffold0243 (1 HSPs)
scaffold0243 (122-159)||(4916-4953)
[»] scaffold0261 (1 HSPs)
scaffold0261 (126-206)||(5813-5896)
[»] scaffold1359 (1 HSPs)
scaffold1359 (54-87)||(734-767)
[»] scaffold0607 (1 HSPs)
scaffold0607 (51-87)||(6002-6038)
[»] scaffold0473 (1 HSPs)
scaffold0473 (51-87)||(2770-2806)
[»] scaffold0471 (1 HSPs)
scaffold0471 (51-87)||(3300-3336)
[»] scaffold0280 (1 HSPs)
scaffold0280 (51-87)||(2809-2845)
[»] scaffold0249 (1 HSPs)
scaffold0249 (51-87)||(17844-17880)
[»] scaffold0247 (2 HSPs)
scaffold0247 (51-87)||(15818-15854)
scaffold0247 (51-87)||(25478-25514)
[»] scaffold0217 (1 HSPs)
scaffold0217 (51-87)||(19027-19063)
[»] scaffold0193 (1 HSPs)
scaffold0193 (122-185)||(15945-16009)
[»] scaffold0028 (1 HSPs)
scaffold0028 (51-87)||(5681-5717)
[»] scaffold0012 (1 HSPs)
scaffold0012 (51-87)||(215576-215612)
[»] scaffold0003 (2 HSPs)
scaffold0003 (122-206)||(89931-90015)
scaffold0003 (51-87)||(90134-90170)


Alignment Details
Target: chr4 (Bit Score: 101; Significance: 4e-50; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 6641797 - 6641941
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| |||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  6641797 cactcttctgatcttctacaatgctaggcatgattaaatcctttgaacaacctttgaagctttaaatctctcatcttctgatgaaattcagcttctggtg 6641896  T
Q  191 atattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||||||||||||||||| || | |||||||||||| ||||||    
T  6641897 atattgcttctgatgaggtgcttctgatgaacttgcttatgatga 6641941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 40846212 - 40846359
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggt 189  Q
    |||| ||||| |||||||||||| ||||  ||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  40846212 cactttcctggtcttctgcaatgctaggcgtgattaaatccattgaacagccttttgaagctttaagtctctcatcttctgatgaacttcagcttccggt 40846311  T
Q  190 gatatt--gcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||| ||  |||||||||||| || || | ||||||||| |||||||||    
T  40846312 gatcttcagcttctgatgagatgcttctgatgaacttgtttctgatga 40846359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 37435501 - 37435388
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||| |||| ||||||||| || || | |||||    
T  37435501 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcctctgatgagatgcttctgatgaa 37435402  T
Q  222 cttgcttctgatga 235  Q
    ||||||||||||||    
T  37435401 cttgcttctgatga 37435388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 16632585 - 16632702
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||| ||||||  ||||| |||||||||||||| || |||| ||||     
T  16632585 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactttagcttctagtgatcttgcttctgatgagatgcttttgatgac 16632684  T
Q  222 cttgcttctgatgatgtc 239  Q
    ||||||||||||| ||||    
T  16632685 cttgcttctgatggtgtc 16632702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 55380403 - 55380519
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggt 189  Q
    |||||| ||| |||||||||||| |||| |||||||||||| ||||||| ||||| ||||||||||||||  ||||| || ||||||||||||||| | |    
T  55380403 cactcttctggtcttctgcaatgttaggcatgattaaatccattgaacagccttttgaagctttaagtcttgcatctcctaatgaacttcagcttctgat 55380502  T
Q  190 gatattgcttctgatga 206  Q
    ||| |||||||||||||    
T  55380503 gatcttgcttctgatga 55380519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 56034719 - 56034803
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| |||||||  ||||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||    
T  56034719 gattaaatccattgaacagtctttgaagctttaagtcttgcatcttctgatgaacttcagcttctggtgatcttgcttctgatga 56034803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 45833539 - 45833654
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||  |||||| |||||| ||  |||||||||||| || || | ||     
T  45833539 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttatgata 45833638  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  45833639 aacttgcttctgatga 45833654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 15139372 - 15139482
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaac-ttcagcttcgggtgatatt--gcttctgatgaggtgttttttat 218  Q
    |||||||||| |||||||||||||||| |||||||||| |||||||||||||||| || |||||| |||||| ||  |||||||| |||||| || | ||    
T  15139372 gattaaatccattgaacaacctttgaatctttaagtctatcatcttctgatgaacttttagcttctggtgatcttcagcttctgacgaggtgcttctaat 15139471  T
Q  219 gaacttgcttc 229  Q
    |||||||||||    
T  15139472 gaacttgcttc 15139482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 23750633 - 23750728
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacc-tttgaagctttaagtctctcatcttctgatgaacttcagcttc 185  Q
    |||||||||| ||||||||| || ||||  ||||||||||| |||||||||| |||||||||||||||||  ||||| ||||||||||||||||||    
T  23750633 cactctcctggtcttctgcagtgctaggcgtgattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctgatgaacttcagcttc 23750728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 23123576 - 23123663
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatgag 207  Q
    |||||||| | |||||||| ||||||||||||||||||  ||||| |||||||||||||||||| |||||| |  |||||||||||||    
T  23123576 gattaaattcattgaacaatctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgatgag 23123663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 22089732 - 22089802
Alignment:
Q  121 tgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||||||||||||||||||||||| |||| ||| |||||||||||||| ||| |||||| ||||||    
T  22089732 tgattaaatcctttgaacaacctttgaagc-ttaattctttcatcttctgatgatctttagcttctggtgat 22089802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 14604853 - 14604759
Alignment:
Q  141 cctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||||||||||||||||   |||| |||||||| || |||||| | |||| |||||||||||||| || || | |||||||||||||||||||    
T  14604853 cctttgaagctttaagtcttggatctcctgatgaagtttagcttctgatgatcttgcttctgatgagatgcttctgatgaacttgcttctgatga 14604759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 41114757 - 41114676
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||| |||||||| |||  ||||||||||  |||||||||||||||||||| || ||||||| |||||||||| ||||||||    
T  41114757 tcttttgcaatgacaggcttgattaaatcaattgaacaacctttgaagcttcaattctctcagcttctgatgatcttcagct 41114676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 19621027 - 19620944
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||| ||||| ||||||||||||||||||||||| |||  ||||| |||||||||||||||||| | ||| | ||||||||||||    
T  19621027 gattgaatccattgaacaacctttgaagctttaactcttgcatctcctgatgaacttcagcttctgatgaga-tgcttctgatga 19620944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 12811141 - 12811029
Alignment:
Q  125 taaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatgaggtgttttttatgaac 222  Q
    ||||||| |||||||||||||||||||||||||||  ||||| || |||||||  |||||| |||||| |  | || |||||||| || || | ||||||    
T  12811141 taaatccattgaacaacctttgaagctttaagtcttgcatctcctaatgaactagagcttctggtgatcttctactactgatgagatgcttctgatgaac 12811042  T
Q  223 ttgcttctgatga 235  Q
    |||||| ||||||    
T  12811041 ttgcttttgatga 12811029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 11915824 - 11915896
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatga 174  Q
    |||||||||||||| ||  |||||||||| ||||| || |||||||||||| || ||||||| ||||||||||    
T  11915824 tcttctgcaatgatgggcgtgattaaatcatttgagcagcctttgaagcttcaattctctcagcttctgatga 11915896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 17788040 - 17787962
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttca 180  Q
    ||||||||||||||| |  |||||||||| |||||||| |||||||||||| || ||| ||| ||||| |||| |||||    
T  17788040 tcttctgcaatgataagcgtgattaaatcatttgaacagcctttgaagcttcaattctttcagcttctaatgatcttca 17787962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 19884858 - 19884916
Alignment:
Q  134 tgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||| |||||||||||||||||||  ||||| |||||||||| ||||||| ||||||    
T  19884858 tgaacatcctttgaagctttaagtcttgcatctcctgatgaactacagcttctggtgat 19884916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 12601246 - 12601359
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| ||||||| ||||||| |||||||||||  |||||   ||||| ||| | ||||  ||||| |||||||||||||| || || |||||||    
T  12601246 gattaaatccattgaacagcctttgacgctttaagtcttgcatctcgagatgagctttaacttctagtgatcttgcttctgatgagatgcttcttatgaa 12601345  T
Q  222 cttgcttctgatga 235  Q
      ||||| ||||||    
T  12601346 aatgcttttgatga 12601359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 37985578 - 37985541
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtct 159  Q
    |||||||||| |||||||||||||||||||||||||||    
T  37985578 gattaaatccattgaacaacctttgaagctttaagtct 37985541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 10692841 - 10692877
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  10692841 agcagagacaaaaacagagtagtggaggtagtggttg 10692877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 10906607 - 10906643
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  10906607 agcagagacaaaaacagagtagtggaggtagtggttg 10906643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 16853493 - 16853529
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  16853493 agcagagacaaaaacagagtagtggaggtagtggttg 16853529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 29680510 - 29680423
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgag 207  Q
    |||||||||| |||||||||||||| ||||||||||||  ||||| ||| | ||||  |||||| |||||| ||  ||||||||||||    
T  29680510 gattaaatccattgaacaacctttggagctttaagtcttgcatctcctggtaaactagagcttctggtgatcttcagcttctgatgag 29680423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 87
Target Start/End: Original strand, 1672384 - 1672415
Alignment:
Q  56 agacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||||||||||||||||||||||||    
T  1672384 agacaagaacagagtagtggaggtagtggttg 1672415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 87
Target Start/End: Original strand, 1674859 - 1674890
Alignment:
Q  56 agacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||||||||||||||||||||||||    
T  1674859 agacaagaacagagtagtggaggtagtggttg 1674890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 10073091 - 10073134
Alignment:
Q  134 tgaacaacctttgaagctttaagtctctcatcttctgatgaact 177  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||    
T  10073091 tgaacaacctttgaagctttaagtcttgcatctcctgatgaact 10073134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 87
Target Start/End: Complemental strand, 31266842 - 31266811
Alignment:
Q  56 agacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||||||||||||||||||||||||    
T  31266842 agacaagaacagagtagtggaggtagtggttg 31266811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 14904322 - 14904252
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||||||||| | | |||||||||||| ||||  ||||| |||||||||| || |||| ||||||    
T  14904322 gattaaatcctttgaatagcttttgaagctttaggtcttgcatctcctgatgaactacaacttctggtgat 14904252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 29121362 - 29121396
Alignment:
Q  53 cagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||| |||||||||||||||||||||||||    
T  29121362 cagagacaaaaacagagtagtggaggtagtggttg 29121396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 16848540 - 16848573
Alignment:
Q  54 agagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||| |||||||||||||||||||||||||    
T  16848540 agagacaaaaacagagtagtggaggtagtggttg 16848573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 3105540 - 3105504
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  3105540 agcagagacaaaaacagagtagtggagatagtggttg 3105504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 6517475 - 6517511
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  6517475 agcagagacaaaaacagagtagtggagatagtggttg 6517511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 6641674 - 6641710
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||  |||||||||||||||||||||||||    
T  6641674 agcagagacataaacagagtagtggaggtagtggttg 6641710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 8105628 - 8105663
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  8105628 agcagagacaa-aacagagtagtggaggtagtggttg 8105663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 9751661 - 9751625
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  9751661 agcagagacaaaaacagagtagtggaagtagtggttg 9751625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 14605028 - 14604992
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||| |||||| |||||||||||||||||||||||||    
T  14605028 agcatagacaaaaacagagtagtggaggtagtggttg 14604992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 17247388 - 17247472
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||| ||||| ||||||||| ||||||||||||||    |||||| |||||||||| ||||||| |||||| ||  |||||||||||    
T  17247388 gattgaatccattgaacaacttttgaagctttaag--attcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 17247472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 17398795 - 17398759
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  17398795 agcagagacaaaaacagagtagtggagttagtggttg 17398759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 19911835 - 19911791
Alignment:
Q  133 ttgaacaacctttgaagctttaagtctctcatcttctgatgaact 177  Q
    ||||||||||||| |||||||||||||  ||||| ||||||||||    
T  19911835 ttgaacaacctttaaagctttaagtcttgcatctcctgatgaact 19911791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 22190836 - 22190872
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  22190836 agcagagacaaaaacagagtagtggaagtagtggttg 22190872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 25651224 - 25651189
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25651224 agcagagacaa-aacagagtagtggaggtagtggttg 25651189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 37435656 - 37435620
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  37435656 agcagagacaaaaacaaagtagtggaggtagtggttg 37435620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 40860657 - 40860693
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  40860657 agcagagacaaaaacagagtagtggaagtagtggttg 40860693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 79 - 206
Target Start/End: Original strand, 16032631 - 16032757
Alignment:
Q  79 tagtggttgatacactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaactt 178  Q
    |||| ||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16032631 tagtcgttgatacactctcctggtcttctgcagtgataggcatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatg-actt 16032729  T
Q  179 cagcttcgggtgatattgcttctgatga 206  Q
    || |||||||||||||||||| ||||||    
T  16032730 caacttcgggtgatattgcttatgatga 16032757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 20725205 - 20725349
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| ||| |||||||||||| |||   |||||| ||| |||||||| ||||||||||||||| ||||||| ||| |||||| |||||||||| ||||    
T  20725205 cactcttctggtcttctgcaatgctagacgtgattagatcttttgaacagcctttgaagctttaattctctcagcttatgatgatcttcagcttctggtg 20725304  T
Q  191 atattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    || || ||| |||||||||| || | |||||||||||||||||||    
T  20725305 atgtttcttttgatgaggtgcttatgatgaacttgcttctgatga 20725349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 12388906 - 12388821
Alignment:
Q  98 ctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||||||||||||||  |||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  12388906 ctgatcttctgcaattctagacatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttcttatgatcttcagct 12388821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 29951447 - 29951335
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||| ||  ||||||||| ||||| || | |||    
T  29951447 gattaaatccattgaaaaacctttgaagctttaagtctctcgtcttctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatg 29951348  T
Q  220 aacttgcttctga 232  Q
    |||||||||||||    
T  29951347 aacttgcttctga 29951335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 30000601 - 30000489
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||| ||  ||||||||| ||||| || | |||    
T  30000601 gattaaatccattgaaaaacctttgaagctttaagtctctcgtcttctgatgaacttcagcttctagtgatcttcagcttctgataaggtgcttctgatg 30000502  T
Q  220 aacttgcttctga 232  Q
    |||||||||||||    
T  30000501 aacttgcttctga 30000489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 6090882 - 6090997
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||| |||||||||||| |||||||||  ||||| |||||||||||||||||| |||||| |  ||||||||||||| || |||| |||    
T  6090882 gattaaatccattgagcaacctttgaagttttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctgcttctgatgagatgcttttgatg 6090981  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  6090982 aacttgcttctgatga 6090997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 19249453 - 19249361
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||||| ||| |||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  19249453 cactcttctggtcttctgcaatgctaggcgtgattaaatcgtttgaacaacctttgaagctttaagtctctcatcttctaatgatcttcagct 19249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 52920555 - 52920670
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||| || |||||||| ||||||||||  ||||| |||||||||||||||||| |||||| ||  |||||||||||| || || | |||    
T  52920555 gattaaatccattgagcagcctttgaaactttaagtcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgagatgcttctgatg 52920654  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  52920655 aacttgcttctgatga 52920670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 14393013 - 14392900
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||| ||||||||||   |||| || |||||||||||||||  ||||| |||||| ||||||| || || | ||||     
T  14393013 gattaaatccattgaacaacctttgaaactttaagtcttgtatctcctaatgaacttcagcttctagtgatcttgcttttgatgagatgcttatgatgat 14392914  T
Q  222 cttgcttctgatga 235  Q
    ||||||||||||||    
T  14392913 cttgcttctgatga 14392900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 12963094 - 12963010
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| |||||||||| ||||||||||||||||  ||||| |||||||||| || |||| |||||| |||||||||||||    
T  12963094 gattaaatcccttgaacaacccttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttgcttctgatga 12963010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 237
Target Start/End: Original strand, 31303536 - 31303653
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||| | ||||||||||||| ||||||||||||| |||||| ||||  ||||  |||||| |||||| ||  |||||||||||| || || | |||    
T  31303536 gattaaattcattgaacaacctttaaagctttaagtctttcatctcctgagtaactagagcttctggtgatcttcagcttctgatgagatgcttctgatg 31303635  T
Q  220 aacttgcttctgatgatg 237  Q
    ||||||||||||||||||    
T  31303636 aacttgcttctgatgatg 31303653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 2561338 - 2561408
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||  |||||| ||||||    
T  2561338 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgat 2561408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 233
Target Start/End: Complemental strand, 49642771 - 49642658
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||  |||||||||||||||||||||||||||  ||||| |||||||||| || |||| |||||| ||  |||||| ||||| || || | |||    
T  49642771 gattaaatctattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctaatgagatgcttctgatg 49642672  T
Q  220 aacttgcttctgat 233  Q
    | ||||||||||||    
T  49642671 accttgcttctgat 49642658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 18121631 - 18121511
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatg-aggtgttttttat 218  Q
    |||| ||||| ||||||||||||||||||||||| |||  ||||| ||||||||||  |||||| |||||| ||  |||| ||||| |  || |||| ||    
T  18121631 gattgaatccattgaacaacctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatctttagcttatgatgaacttgcttttgat 18121532  T
Q  219 gaacttgcttctgatgatgtc 239  Q
    |||||||||||||||||||||    
T  18121531 gaacttgcttctgatgatgtc 18121511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 13948486 - 13948601
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||  ||||||| ||||||| |||||||||||  ||||| ||||||| ||| |||||| |||||| ||  |||||||||||| || || | ||     
T  13948486 gattaaatcaattgaacatcctttgacgctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgata 13948585  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  13948586 aacttgcttctgatga 13948601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 17238931 - 17238847
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| |||| || |||||||||||||||||||  ||||| || ||| |||||| |||| |||||| |||||||||||||    
T  17238931 gattaaatccattgatcagcctttgaagctttaagtcttgcatctccttatgcacttcatcttctggtgatcttgcttctgatga 17238847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 37467483 - 37467567
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| |||||||| |||||||| ||||||| |  ||||| |||||||||| | ||||| |||||| |||||||||||||    
T  37467483 gattaaatccattgaacaagctttgaagatttaagttttgcatctcctgatgaactactgcttctggtgatcttgcttctgatga 37467567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 15903349 - 15903464
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||| ||||| ||||||| | |||||||||||||||||  ||||| ||||| || | ||||||  |||||| ||  |||||||||||| || || | |||    
T  15903349 gattgaatccattgaacagcgtttgaagctttaagtcttgcatctcctgataaattacagcttttggtgatcttcagcttctgatgagatggttctgatg 15903448  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  15903449 aacttgcttctgatga 15903464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 12968435 - 12968506
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatg 173  Q
    |||||||||||||||| | |||||||| | ||| ||||||||||||||||| || ||| ||| |||||||||    
T  12968435 tcttctgcaatgatagatgtgattaaaacatttaaacaacctttgaagcttcaaatctttcagcttctgatg 12968506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 16199752 - 16199705
Alignment:
Q  188 gtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||| ||||||||||||||||| || |||||||||||||||||||||    
T  16199752 gtgatgttgcttctgatgaggtgcttcttatgaacttgcttctgatga 16199705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 20646330 - 20646420
Alignment:
Q  147 aagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||||||||||  ||||| |||||||||| || |||| |||||| ||  |||||||||||| || || | |||||||||||||||||||    
T  20646330 aagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatgaacttgcttctgatga 20646420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 207
Target Start/End: Complemental strand, 49553484 - 49553413
Alignment:
Q  136 aacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgag 207  Q
    |||| |||||||| ||||||||||  ||||| |||||||||||| ||||| |||||| || |||||||||||    
T  49553484 aacagcctttgaaactttaagtcttgcatctcctgatgaacttcggcttctggtgatcttacttctgatgag 49553413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 14969477 - 14969547
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | || |||||||  |||||| ||||||    
T  14969477 gattaaatccattgaacaacctttgaagctttaagtcttgcatatcctcatgaactagagcttctggtgat 14969547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 26417709 - 26417631
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttca 180  Q
    ||||||| |||||||||  |||||||| | ||||||||| ||||||||||| || ||| ||| |||||||||| |||||    
T  26417709 tcttctggaatgataggcgtgattaaaacatttgaacaaactttgaagcttcaattctttcagcttctgatgatcttca 26417631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 28582256 - 28582326
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||| |||||||| |  |||||| ||||||    
T  28582256 gattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgat 28582326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 13824219 - 13824256
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtct 159  Q
    |||||||||| |||||||||||||||||||||||||||    
T  13824219 gattaaatccattgaacaacctttgaagctttaagtct 13824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 2561183 - 2561219
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  2561183 agcagagacaaaaacagagtagtggaggtagtggttg 2561219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 6090727 - 6090763
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  6090727 agcagagacaaaaacagagtagtggaggtagtggttg 6090763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 11868264 - 11868300
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  11868264 agcagagacaaaaacagagtagtggaggtagtggttg 11868300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 12726394 - 12726358
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  12726394 agcagagacaaaaacagagtagtggaggtagtggttg 12726358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 16032520 - 16032556
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  16032520 agcagagacaaaaacagagtagtggaggtagtggttg 16032556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 25398282 - 25398230
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatga 174  Q
    |||||||| | |||||||||||||||||||||||||||  |||||| ||||||    
T  25398282 gattaaattcattgaacaacctttgaagctttaagtcttgcatcttatgatga 25398230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 25398419 - 25398383
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25398419 agcagagacaaaaacagagtagtggaggtagtggttg 25398383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 40799869 - 40799905
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  40799869 agcagagacaaaaacagagtagtggaggtagtggttg 40799905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 53056891 - 53056855
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  53056891 agcagagacaaaaacagagtagtggaggtagtggttg 53056855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 12388799 - 12388752
Alignment:
Q  188 gtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||| ||||||||||||||||| || | |||||||||||||||||||    
T  12388799 gtgatgttgcttctgatgaggtgcttatgatgaacttgcttctgatga 12388752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 12389035 - 12389000
Alignment:
Q  52 gcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||| |||||||||||||||||||||||||    
T  12389035 gcagagacaaaaacagagtagtggaggtagtggttg 12389000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 86
Target Start/End: Original strand, 22140759 - 22140794
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggtt 86  Q
    ||||||||||| ||||||||||||||||||||||||    
T  22140759 agcagagacaaaaacagagtagtggaggtagtggtt 22140794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Complemental strand, 8740165 - 8740135
Alignment:
Q  57 gacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||||||||||||||||||||||||    
T  8740165 gacaagaacagagtagtggaggtagtggttg 8740135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Original strand, 11164026 - 11164056
Alignment:
Q  57 gacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||||||||||||||||||||||||    
T  11164026 gacaagaacagagtagtggaggtagtggttg 11164056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 23538196 - 23538146
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctt 152  Q
    |||||||||||||||||  |||||||| | ||||||||| |||||||||||    
T  23538196 tcttctgcaatgataggcgtgattaaaacatttgaacaaactttgaagctt 23538146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 38177652 - 38177615
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtct 159  Q
    |||||||| | |||||||||||||||||||||||||||    
T  38177652 gattaaattcattgaacaacctttgaagctttaagtct 38177615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 12726239 - 12726155
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||| ||||| ||||| | |||||||||||||||||||   |||| ||||||||||||| ||||  ||||| ||| |||| ||||    
T  12726239 gattgaatccattgaatagcctttgaagctttaagtcttgaatctcctgatgaacttcaacttcttgtgatcttgtttctcatga 12726155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 16658616 - 16658541
Alignment:
Q  133 ttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    ||||||||||||||||| || ||||||  ||||| |||||||||| || |||| |||||| ||  |||||||||||    
T  16658616 ttgaacaacctttgaagtttcaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 16658541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 18121786 - 18121750
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||||  ||||||||||||||||||||||||    
T  18121786 agcagagacaaacacagagtagtggaggtagtggttg 18121750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 18142761 - 18142677
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||| ||||| ||||| | ||||||||||||||| |||  ||||| ||||||||||  |||||| | |||  |||||||||||||    
T  18142761 gattgaatccattgaatagcctttgaagctttaaatcttgcatctcctgatgaactagagcttctgatgaacttgcttctgatga 18142677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 18142916 - 18142880
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||||  ||||||||||||||||||||||||    
T  18142916 agcagagacaaacacagagtagtggaggtagtggttg 18142880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 21605818 - 21605782
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  21605818 agcagagacaaaaacagagtagtggagatagtggttg 21605782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 21636834 - 21636798
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  21636834 agcagagacaaaaacagagtagtggaagtagtggttg 21636798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 24775698 - 24775662
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  24775698 agcagagacaaaaacagagtagtggatgtagtggttg 24775662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 29855404 - 29855440
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||| || |||||||||||||||||||||||||    
T  29855404 agcagagataaaaacagagtagtggaggtagtggttg 29855440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 30054381 - 30054345
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  30054381 agcagagacaaaaacagagtagtggagttagtggttg 30054345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 47207701 - 47207737
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||| |||||| |||||||||||||||||||||||||    
T  47207701 agcaaagacaaaaacagagtagtggaggtagtggttg 47207737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 47207857 - 47207941
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| ||||||||||||||||| ||||  | |  ||||| |||||||||| ||||||| |||||| ||  |||||||||||    
T  47207857 gattaaatccattgaacaacctttgaagtttta--tgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 47207941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 47405585 - 47405549
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  47405585 agcagagacaaaaacatagtagtggaggtagtggttg 47405549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 49553653 - 49553617
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| || ||||||||||||||||||||||    
T  49553653 agcagagacaaaaatagagtagtggaggtagtggttg 49553617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 239
Target Start/End: Original strand, 19707617 - 19707765
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| ||| |||||||||||| |||| |||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||| || |    
T  19707617 cactcttctggtcttctgcaatgttaggaatgattaagtcctttgaacagcctttgaagctttaattctttcatcttctgatgatcttcagcttctggcg 19707716  T
Q  191 atattgcttctgatgaggtgttttttatgaacttgcttctgatgatgtc 239  Q
    || |||||||| |||||||| || | |||||||||||||||||||||||    
T  19707717 atcttgcttctaatgaggtgcttctaatgaacttgcttctgatgatgtc 19707765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 17701888 - 17701997
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat-at-tgcttctgatgaggtgttttttatg 219  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| |||||| || | |||    
T  17701888 gattaaattcattgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttctggtgatcatctgcttctgaagaggtgcttctgatg 17701987  T
Q  220 aacttgcttc 229  Q
    ||||||||||    
T  17701988 aacttgcttc 17701997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 17267627 - 17267724
Alignment:
Q  133 ttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttct 230  Q
    |||||||||||||||||||||||||||  |||||  ||||||||||||||||| |||||| |||||||||||||| || |||| ||||||||||||||    
T  17267627 ttgaacaacctttgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatcttgcttctgatgagatgcttttgatgaacttgcttct 17267724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 33083000 - 33083085
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgag 207  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||| ||||||||||||||    
T  33083000 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcttctgatgag 33083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 16189127 - 16189244
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| || ||||||||||||||||||||||||  ||||| || ||||||||| ||||| |||||| |||||||| ||||| |  || | |||||    
T  16189127 gattaaatccattaaacaacctttgaagctttaagtcttgcatctcctaatgaacttcggcttctggtgatcttgcttctaatgagatacttctgatgaa 16189226  T
Q  222 cttgcttctgatgatgtc 239  Q
    ||||||||||||||||||    
T  16189227 cttgcttctgatgatgtc 16189244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 20382402 - 20382289
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||| ||||| ||||||| |||||||||||||||| ||  ||||| |||||||||||||||||| |||||| |||||||||||||| || || | |||||    
T  20382402 gattgaatccattgaacagcctttgaagctttaagacttgcatctcctgatgaacttcagcttctggtgatcttgcttctgatgagatgcttctgatgaa 20382303  T
Q  222 cttgcttctgatga 235  Q
    ||||||| ||||||    
T  20382302 cttgcttttgatga 20382289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 23263620 - 23263506
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagct-ttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatga 220  Q
    |||||||||  ||||||||||||||||| | |||||| |  ||||| |||||||||||||||||| | |||| ||||||||||||||||| || | ||||    
T  23263620 gattaaatctattgaacaacctttgaagttcttaagttttgcatctcctgatgaacttcagcttctgatgatcttgcttctgatgaggtgcttctgatga 23263521  T
Q  221 acttgcttctgatga 235  Q
    |||||||||||||||    
T  23263520 acttgcttctgatga 23263506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 16681311 - 16681198
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| ||||||| ||||||||||| |||||||  ||||| ||||||||||| ||||||  ||||| |||||| ||||||| || || | |||||    
T  16681311 gattaaatccattgaacagcctttgaagctctaagtcttgcatctcctgatgaactttagcttctagtgatcttgcttatgatgagatgcttctgatgaa 16681212  T
Q  222 cttgcttctgatga 235  Q
    ||||||||||||||    
T  16681211 cttgcttctgatga 16681198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 123 - 239
Target Start/End: Complemental strand, 17525736 - 17525619
Alignment:
Q  123 attaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    ||||||||| ||||||||||||| |||| |||||||||  ||||| |||||||||| ||| ||| |||||| |||||||||||||| || || | | |||    
T  17525736 attaaatccattgaacaaccttttgaagatttaagtcttgcatctcctgatgaactacagtttctggtgatcttgcttctgatgagatgcttctgacgaa 17525637  T
Q  222 cttgcttctgatgatgtc 239  Q
    ||||||||||||||||||    
T  17525636 cttgcttctgatgatgtc 17525619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 22745630 - 22745742
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||  |||||| |||||| ||  |||||||||||| || || | |||    
T  22745630 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgagatgcttctgatg 22745729  T
Q  220 aacttgcttctga 232  Q
    |||||||||||||    
T  22745730 aacttgcttctga 22745742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 18321167 - 18321097
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||    
T  18321167 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 18321097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 43645007 - 43645090
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatga 174  Q
    |||||| ||| |||||||||||| ||||  |||||||||| |||||||||||||||||||||| | |||||||||||| |||||    
T  43645007 cactcttctggtcttctgcaatgctaggcgtgattaaatcatttgaacaacctttgaagctttgattctctcatcttccgatga 43645090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 39693678 - 39693793
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||| ||||| |||||||||||||||||||||||||||  ||||| ||||||| || || |||| |||||| ||  |||||||||||  || |||| |||    
T  39693678 gattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgagctacaacttctggtgatcttcagcttctgatgacatgcttttgatg 39693777  T
Q  220 aacttgcttctgatga 235  Q
    |||||| |||||||||    
T  39693778 aacttgtttctgatga 39693793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 18719156 - 18719228
Alignment:
Q  134 tgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||| ||||||||||| |||||||  |||||||||| |||||| |||||| |||||| |||||||||||||    
T  18719156 tgaacagcctttgaagctctaagtcttgcatcttctgaagaacttaagcttctggtgatcttgcttctgatga 18719228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 19943379 - 19943494
Alignment:
Q  122 gattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttat 218  Q
    |||||||||| ||||| | ||||| ||||||||||||||  ||||| ||||||||||||||||||  ||||| ||  |||||||||||| || || | ||    
T  19943379 gattaaatccattgaatagccttttgaagctttaagtcttgcatctcctgatgaacttcagcttctagtgatctttagcttctgatgagatgcttctgat 19943478  T
Q  219 gaacttgcttctgatg 234  Q
    ||||||||||| ||||    
T  19943479 gaacttgcttccgatg 19943494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 24646481 - 24646596
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||  ||||||||||||||||||||||| |||  |||||  |||||||||  |||||| |||||| ||  ||||||||| || || || | |||    
T  24646481 gattaaatcaattgaacaacctttgaagctttaactcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgataagatgcttctgatg 24646580  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  24646581 aacttgcttctgatga 24646596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 21933026 - 21933112
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||| |  |||||| |||||| ||  |||||||||||    
T  21933026 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatga 21933112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 234
Target Start/End: Original strand, 16207449 - 16207563
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||| | |||||||||||||||||  ||||| ||||||||||  |||||| |||||| ||  |||||| ||||| || || | ||     
T  16207449 gattaaatccattgaacagcgtttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctaatgagatgcttctgata 16207548  T
Q  220 aacttgcttctgatg 234  Q
    |||||||||| ||||    
T  16207549 aacttgcttcagatg 16207563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 22461667 - 22461588
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcag 181  Q
    ||||||||||||||| |   |||||||||||| |||||||||||||||||| || ||  ||| |||||||||| ||||||    
T  22461667 tcttctgcaatgatatgctagattaaatccttcgaacaacctttgaagcttaaattcgttcagcttctgatgatcttcag 22461588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 17441816 - 17441746
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||| ||| ||||||||||||| |||||||||||||  ||||| ||||||||||  |||||| ||||||    
T  17441816 gattaagtccattgaacaacctttaaagctttaagtcttgcatctcctgatgaactagagcttctggtgat 17441746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 18722655 - 18722597
Alignment:
Q  121 tgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttc 179  Q
    |||||||||||||||||||  ||||||||| |||| ||| |||||||||||||| ||||    
T  18722655 tgattaaatcctttgaacagtctttgaagcattaactctttcatcttctgatgatcttc 18722597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 18731000 - 18730942
Alignment:
Q  121 tgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttc 179  Q
    |||||||||||||||||||  ||||||||| |||| ||| |||||||||||||| ||||    
T  18731000 tgattaaatcctttgaacagtctttgaagcattaactctttcatcttctgatgatcttc 18730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 1237625 - 1237661
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1237625 agcagagacaacaacagagtagtggaggtagtggttg 1237661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 17797410 - 17797446
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17797410 agcagagacaaaaacagagtagtggaggtagtggttg 17797446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 18679970 - 18680042
Alignment:
Q  134 tgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    ||||| |||||||||||| |||||||  |||||||||||||| |  ||||||  ||||| |||||||||||||    
T  18679970 tgaactacctttgaagctctaagtcttgcatcttctgatgaaatgaagcttctagtgatcttgcttctgatga 18680042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 23185234 - 23185150
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| ||||||||||||||||||||||  | |  ||||| |||||||||| ||||||| |||||| ||  |||||||||||    
T  23185234 gattaaatccattgaacaacctttgaagcttta--tgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 23185150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 30421436 - 30421352
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| ||||||| ||||||||||||||  | |  |||||||||||||||| ||||||| |||||| ||  |||||||||||    
T  30421436 gattaaatccattgaacagcctttgaagcttta--tgttgcatcttctgatgaactgcagcttctggtgattttgagcttctgatga 30421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 45538602 - 45538566
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  45538602 agcagagacaaaaacagagtagtggaggtagtggttg 45538566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 19156339 - 19156425
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| ||||||| ||||||||||||||| |||  |||||  ||||||||| || |||| |||||| ||  |||||||||||    
T  19156339 gattaaatccattgaacagcctttgaagctttaattcttgcatctcttgatgaactacaacttctggtgatcttcagcttctgatga 19156425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 30421591 - 30421556
Alignment:
Q  52 gcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||| |||||||||||||||||||||||||    
T  30421591 gcagagacaaaaacagagtagtggaggtagtggttg 30421556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 6407714 - 6407750
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  6407714 agcagagacaaaaacagagtagtggagatagtggttg 6407750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 9320557 - 9320592
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  9320557 agcagagacaa-aacagagtagtggaggtagtggttg 9320592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 14989614 - 14989578
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  14989614 agcagagacaaaaacagagtagtggagatagtggttg 14989578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 15336251 - 15336215
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||| |||||| |||||||||||||||||||||||||    
T  15336251 agcaaagacaaaaacagagtagtggaggtagtggttg 15336215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 15425316 - 15425280
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||| |||||| |||||||||||||||||||||||||    
T  15425316 agcaaagacaaaaacagagtagtggaggtagtggttg 15425280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 15516620 - 15516584
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||| |||||| |||||||||||||||||||||||||    
T  15516620 agcaaagacaaaaacagagtagtggaggtagtggttg 15516584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 16207294 - 16207330
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  16207294 agcagagacaaaaacagagtagtggagatagtggttg 16207330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 18151809 - 18151773
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  18151809 agcagagacaaaaacagagtagtggagatagtggttg 18151773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 23185389 - 23185353
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  23185389 agcagagacaaaaacagagcagtggaggtagtggttg 23185353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 36105183 - 36105219
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  36105183 agcagagacaaaaacagagcagtggaggtagtggttg 36105219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 40845550 - 40845514
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  40845550 agcagagacaaaaacagagtagtggagatagtggttg 40845514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 210
Target Start/End: Original strand, 10022 - 10141
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| |||||||||||||||| |||   ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10022 cactcttctgatcttctgcaatgctagacgtgattaaatccttagaacagcctttgaagctttaagtttctcatcttctgatgaacttcagcttctggtg 10121  T
Q  191 atattgcttctgatgaggtg 210  Q
    ||||||||||| ||||||||    
T  10122 atattgcttctaatgaggtg 10141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 642729 - 642583
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||| ||||    
T  642729 cactctcctgatcttctgtaatgctaggtgtgattaaatccattgaacaacctttgaagctttaagtctctcatcttctgatgaactgcaatttctggtg 642630  T
Q  191 atatt--gcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    || ||  || ||| |||||||| || | |||||||||||||||||||    
T  642629 atcttcagcatctcatgaggtgcttctgatgaacttgcttctgatga 642583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 21198996 - 21198910
Alignment:
Q  121 tgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  21198996 tgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagctcctggtgatattgcttctgatgag 21198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 21099726 - 21099580
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    ||||||| || |||| || |||| |||| |||||||||||| || |||| ||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  21099726 cactctcttggtcttttgtaatgctaggcatgattaaatccatttaacagcctttgaagctttaagtctctgatcttctgatgaactttagcttctggtg 21099627  T
Q  191 atatt--gcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    || ||  ||||||||||||||| |||| |||||||||||||||||||    
T  21099626 attttcagcttctgatgaggtgcttttgatgaacttgcttctgatga 21099580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 239
Target Start/End: Original strand, 23881182 - 23881332
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggt 189  Q
    |||||||||| |||||||||||| ||||  ||||||||||| || |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||    
T  23881182 cactctcctggtcttctgcaatgctaggcgtgattaaatccattaaacaaccttttgaagcttta-gtctctcatcttctgatgaacttcagcttctggt 23881280  T
Q  190 gatatt--gcttctgatgaggtgttttttatgaacttgcttctgatgatgtc 239  Q
    | | ||  ||||||||||||||| || | |||| ||||||||||||||||||    
T  23881281 gttcttcagcttctgatgaggtgcttctgatgaccttgcttctgatgatgtc 23881332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 7745683 - 7745570
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||| |||||||||||  ||||| |||||||||||||| || |||| |||||    
T  7745683 gattaaatccattgaacaacctttgaagctttaagtcttacatctcctgatgtacttcagcttcttgtgatcttgcttctgatgagatgcttttgatgaa 7745584  T
Q  222 cttgcttctgatga 235  Q
    ||||||||| ||||    
T  7745583 cttgcttcttatga 7745570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 23412964 - 23412880
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||| |||||||||||||    
T  23412964 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcttctgatga 23412880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 25096845 - 25096753
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||||| ||| |||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  25096845 cactcttctggtcttctgcaatgctaggcgtaattaaatcctttgaacaacctttgaagctttaagtctcttatcttatgatgatcttcagct 25096753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 25154815 - 25154723
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||||| ||| |||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  25154815 cactcttctggtcttctgcaatgctaggcgtaattaaatcctttgaacaacctttgaagctttaagtctcttatcttatgatgatcttcagct 25154723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 17815115 - 17815228
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| ||||||| |||||||||||||||||||  |||||  ||||||| || |||||| |||||| |||||||||||||| || || | |||||    
T  17815115 gattaaatccattgaacagcctttgaagctttaagtcttgcatctcttgatgaaatttagcttctggtgatcttgcttctgatgagatgcttctgatgaa 17815214  T
Q  222 cttgcttctgatga 235  Q
    |||||| |||||||    
T  17815215 cttgctactgatga 17815228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 6499354 - 6499473
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacc-tttgaagctttaagtctctcatcttctgatgaacttcagcttcgggt 189  Q
    |||||||||| |||||||||||  | ||| ||||||||||| |||||||||| ||||||||||||||  ||||||||||  ||||||||||||||| |||    
T  6499354 cactctcctggtcttctgcaatactgggtgtgattaaatccattgaacaaccttttgaagctttaag--tctcatcttcatatgaacttcagcttctggt 6499451  T
Q  190 gatat--tgcttctgatgaggt 209  Q
    ||| |  |||||||||||||||    
T  6499452 gatcttctgcttctgatgaggt 6499473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 9398723 - 9398649
Alignment:
Q  134 tgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||| ||  |||||||||||    
T  9398723 tgaacaacctttgaacctttaagtctctcatcttctgatgaacttcaacttctggtgatcttgagcttctgatga 9398649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 207
Target Start/End: Complemental strand, 21072262 - 21072144
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| ||| |||||||||||| |  |  ||||||||||| | ||||||||||| |||||||||||||  ||||| |||||||||||||||||| ||||    
T  21072262 cactcttctggtcttctgcaatgctgtgagtgattaaatccatagaacaaccttttaagctttaagtcttgcatctcctgatgaacttcagcttctggtg 21072163  T
Q  191 atatt--gcttctgatgag 207  Q
    || ||  ||||||||||||    
T  21072162 atcttcagcttctgatgag 21072144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 19536290 - 19536177
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||| ||||| ||||||| || ||||||||||||||||  ||||| |||||||||||| |||||  | ||| |||||||||||||| || || | |||||    
T  19536290 gattgaatccattgaacagcccttgaagctttaagtcttgcatctcctgatgaacttctgcttcttgcgatcttgcttctgatgagatgcttctgatgaa 19536191  T
Q  222 cttgcttctgatga 235  Q
    ||| ||||||||||    
T  19536190 cttacttctgatga 19536177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 89412 - 89328
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| ||||||||| ||||||||||||||| |  ||||| |||||||||| || |||| |||||| |||||||||||||    
T  89412 gattaaatccattgaacaacttttgaagctttaagttttgcatctcctgatgaactacaacttctggtgatcttgcttctgatga 89328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 6512421 - 6512337
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    ||||||||||  ||||||||||||||||||||||||||  ||||| |||||||||| || ||||  ||||| |||||||||||||    
T  6512421 gattaaatccactgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctagtgatcttgcttctgatga 6512337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 21910703 - 21910787
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||  || |||| ||||||| |||||||||||  ||||| ||||||||||| |||||| |||||| |||||||||||||    
T  21910703 gattaaatcaattcaacagcctttgacgctttaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctgatga 21910787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 20551041 - 20551105
Alignment:
Q  122 gattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttc 185  Q
    ||||||| || ||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||    
T  20551041 gattaaaaccattgaacaaccttttgaagctttaagtcttgcatctcctgatgaacttcagcttc 20551105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 13545510 - 13545455
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaact 177  Q
    |||||| ||| |||||||||||||||||||||||||||  ||||| ||||||||||    
T  13545510 gattaagtccattgaacaacctttgaagctttaagtcttgcatctcctgatgaact 13545455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 4887014 - 4887050
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4887014 agcagagacaaaaacagagtagtggaggtagtggttg 4887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 20550887 - 20550923
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  20550887 agcagagacaaaaacagagtagtggaggtagtggttg 20550923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 33933259 - 33933295
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33933259 agcagagacaaaaacagagtagtggaggtagtggttg 33933295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 12352758 - 12352693
Alignment:
Q  172 tgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||||||||||| |||||| ||  |||||||||||| || |||| |||||||||||| ||||||    
T  12352758 tgaacttcagcttctggtgatcttcagcttctgatgagatgcttttgatgaacttgcttttgatga 12352693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 7745838 - 7745802
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  7745838 agcagagacaaaaaccgagtagtggaggtagtggttg 7745802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 9088961 - 9088997
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  9088961 agcagagacaaaaacagagtagtggagatagtggttg 9088997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 10848765 - 10848801
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  10848765 agcagagacaaaaacagagtagtggagatagtggttg 10848801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 11993880 - 11993916
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  11993880 agcagagacaaaaacagagtagtggaagtagtggttg 11993916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 14086684 - 14086648
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  14086684 agcagagacaaaaacagagtagtggaggtagcggttg 14086648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 15516962 - 15516997
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  15516962 agcagagacaa-aacagagtagtggaggtagtggttg 15516997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 28139599 - 28139635
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  28139599 agcagagacaaaaacagagtagtggagatagtggttg 28139635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 30115982 - 30115946
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  30115982 agcagagacaaaaacagagtagtggagatagtggttg 30115946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 30742973 - 30743008
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  30742973 agcagagacaa-aacagagtagtggaggtagtggttg 30743008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 33022656 - 33022692
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  33022656 agcagagacaaaaacatagtagtggaggtagtggttg 33022692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 35932151 - 35932115
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  35932151 agcagagacaaaaacagagtagtggaagtagtggttg 35932115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 42243673 - 42243708
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  42243673 agcagagacaa-aacagagtagtggaggtagtggttg 42243708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 91 - 210
Target Start/End: Complemental strand, 23595556 - 23595437
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||    
T  23595556 cactcttctggtcttctgcaatgctaggtgtgattaaatcctttgaacaacctttgaagctttaattctttcatcttctgatgatcttcagcttctggtg 23595457  T
Q  191 atattgcttctgatgaggtg 210  Q
    |  |||||||||||||||||    
T  23595456 aacttgcttctgatgaggtg 23595437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 22272257 - 22272390
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttct 201  Q
    ||||||||||||||||   |||||||||| ||||||||||||||||| ||  || ||||||| |||||||||| |||||||||| |||||| ||||||||    
T  22272257 tcttctgcaatgatagacgtgattaaatcatttgaacaacctttgaaactccaattctctcagcttctgatgatcttcagcttctggtgatgttgcttct 22272356  T
Q  202 gatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||||||||| | ||||||||| |||| ||||    
T  22272357 gatgaggtgtttctgatgaacttgtttctaatga 22272390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 41121696 - 41121587
Alignment:
Q  101 atcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttc 200  Q
    ||||||||||||| ||||  ||||||||||||||||||| ||||||||||||||| |||| || |||||||||| |||||||||| |||||| |||||||    
T  41121696 atcttctgcaatgctaggcgtgattaaatcctttgaacagcctttgaagctttaattctcacagcttctgatgatcttcagcttctggtgatgttgcttc 41121597  T
Q  201 tgatgaggtg 210  Q
    ||||||||||    
T  41121596 tgatgaggtg 41121587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 91 - 232
Target Start/End: Complemental strand, 22454977 - 22454833
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggt 189  Q
    |||||| ||| |||||||||||| | ||  ||||||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||    
T  22454977 cactcttctggtcttctgcaatgttgggcgtgattaaatccattgaacacccttttgaagctttaagtctctcatcttctgaagaacttcagcttctggt 22454878  T
Q  190 gatatt--gcttctgatgaggtgttttttatgaacttgcttctga 232  Q
    ||| ||  ||||||||||||||| || | |||| |||||||||||    
T  22454877 gatcttcagcttctgatgaggtgcttctgatgagcttgcttctga 22454833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 25189511 - 25189598
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaactt 178  Q
    |||||||||| |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||    
T  25189511 cactctcctggtcttctgcaatgctaggtgtgattaaatccattgaacaacctttgaagctttaagtctctcatcttctaataaactt 25189598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 10009704 - 10009591
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||| ||||| ||||||| || ||||||||||||||||  ||||| |||||||||||||||||| |||||| || ||||||||||| || || | |||||    
T  10009704 gattgaatccattgaacagcccttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctttcttctgatgagatgcttctgatgaa 10009605  T
Q  222 cttgcttctgatga 235  Q
    ||||||||||||||    
T  10009604 cttgcttctgatga 10009591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 210
Target Start/End: Original strand, 19540561 - 19540649
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtg 210  Q
    |||||||||| ||||||||| |||||||||||||||||  |||||  ||||||||||||||||| |||||| |||||||||||||||||    
T  19540561 gattaaatccattgaacaacatttgaagctttaagtcttgcatctcatgatgaacttcagcttctggtgatcttgcttctgatgaggtg 19540649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 7609107 - 7609216
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||| ||||| ||||||| || ||||||||||||||||  ||||| ||||||||||| |||||| |||||| |||||||||||||| || || | |||||    
T  7609107 gattgaatccattgaacagcccttgaagctttaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaa 7609206  T
Q  222 cttgcttctg 231  Q
    ||||||||||    
T  7609207 cttgcttctg 7609216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 22260551 - 22260664
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| ||||||||| ||||| |||||||||||  ||||| ||||||| ||| | |||| |||||| || ||||||||||| || |||| |||||    
T  22260551 gattaaatccattgaacaacttttgacgctttaagtcttgcatctcctgatgagctttaacttctggtgatcttccttctgatgagatgcttttgatgaa 22260650  T
Q  222 cttgcttctgatga 235  Q
    ||||||||||||||    
T  22260651 cttgcttctgatga 22260664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 9015325 - 9015211
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||| || ||| || ||| |  ||||||||||||| ||||| | |||    
T  9015325 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactttagtttctgg-gatcttctgcttctgatgagttgtttctgatg 9015227  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  9015226 aacttgcttctgatga 9015211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 22188057 - 22187942
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||| |||||||||||||||||||  ||| | ||||||||||||| |||| |||||| ||  |||||||||||| || || | |||    
T  22188057 gattaaatccattgaacagcctttgaagctttaagtcttgcatgtcctgatgaacttcaacttctggtgatcttcagcttctgatgagatgcttctgatg 22187958  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  22187957 aacttgcttctgatga 22187942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 25037214 - 25037099
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||| ||||| |||||||||||||||||||||||||||  ||||| |||||||||| || |||| |||||| ||  |||||||||||| || || | |||    
T  25037214 gattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatg 25037115  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  25037114 aacttgcttctgatga 25037099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 25041321 - 25041206
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||| ||||| |||||||||||||||||||||||||||  ||||| |||||||||| || |||| |||||| ||  |||||||||||| || || | |||    
T  25041321 gattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagatgcttctgatg 25041222  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  25041221 aacttgcttctgatga 25041206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 44881291 - 44881399
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttct 201  Q
    ||||||||||||||||   ||||||| || |||||||| |||||||||||| || | ||||| |||||||||| |||||||||  |||||| ||||||||    
T  44881291 tcttctgcaatgatagacgtgattaagtcatttgaacagcctttgaagcttcaattatctcagcttctgatgatcttcagcttttggtgatgttgcttct 44881390  T
Q  202 gatgaggtg 210  Q
    |||||||||    
T  44881391 gatgaggtg 44881399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 210
Target Start/End: Complemental strand, 23184295 - 23184180
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| ||| ||||||||| || ||||| ||||||| |||||||||||||||||||||||| || ||| |||||||||||||| |||||||||| ||||    
T  23184295 cactcttctggtcttctgca-tgctaggtgtgattaa-tcctttgaacaacctttgaagctt-aattct-tcatcttctgatgatcttcagcttctggtg 23184200  T
Q  191 atattgcttctgatgaggtg 210  Q
    |  |||||||||||||||||    
T  23184199 aacttgcttctgatgaggtg 23184180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 206
Target Start/End: Original strand, 24377214 - 24377332
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacc-tttgaagctttaagtctctcatcttctgatgaacttcagcttcgggt 189  Q
    |||||| ||| |||||||||||| ||||  ||||||||||| |||||||||| |||||||||||||||||  |||||  ||||||||||||||||| |||    
T  24377214 cactcttctggtcttctgcaatgctaggcgtgattaaatccattgaacaaccttttgaagctttaagtcttgcatctcttgatgaacttcagcttctggt 24377313  T
Q  190 gatatt--gcttctgatga 206  Q
    ||| ||  |||||||||||    
T  24377314 gatctttagcttctgatga 24377332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 24850621 - 24850508
Alignment:
Q  122 gattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttat 218  Q
    |||||||||| ||||||||||||| ||||||||||||||  ||||| |||||| |||||||| || |||||| ||  ||||||||||||||| || | ||    
T  24850621 gattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctgatgtacttcagcatctggtgatctttagcttctgatgaggtgcttctgat 24850522  T
Q  219 gaacttgcttctga 232  Q
    ||||||||||||||    
T  24850521 gaacttgcttctga 24850508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 18430916 - 18430835
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||||||||||||||||  |||||||| | |||||||||||||||||||||||| ||| ||| |||||||||| ||||||||    
T  18430916 tcttctgcaatgataggcgtgattaaaacatttgaacaacctttgaagctttaattctttcagcttctgatgatcttcagct 18430835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 21537203 - 21537088
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||||| ||||  ||||| ||   |||||||||||||| || |  ||    
T  21537203 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcatcttctagtgatctttaacttctgatgaggtgcttctggtg 21537104  T
Q  220 aacttgcttctgatga 235  Q
    | ||||||||||||||    
T  21537103 agcttgcttctgatga 21537088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 23235152 - 23235267
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||| |||||||||||||||||||  |||||  |||||||||  |||||| |||||| ||  |||||||||||| || || | |||    
T  23235152 gattaaatccattgaacagcctttgaagctttaagtcttgcatctcatgatgaactagagcttctggtgattttcagcttctgatgagatgcttctgatg 23235251  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  23235252 aacttgcttctgatga 23235267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 25829279 - 25829363
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| ||||||| ||||||||||| |||||||  ||||| ||||||||||| |||||| |||||| |||||||||||||    
T  25829279 gattaaatccattgaacatcctttgaagctctaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctgatga 25829363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 18376861 - 18376775
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatga 206  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||  |||||||||| |||| |||||| |  ||||||||||||    
T  18376861 gattaaatccattgaacagcctttgaagctttaagtctctcatcttcaaatgaacttcaacttctggtgatcttctgcttctgatga 18376775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 24576183 - 24576294
Alignment:
Q  124 ttaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaact 223  Q
    |||||||| ||||||||||||||||||||||||| |  ||||| || |||||||| |||||| |||||| |||||| ||||||  || || | |||||||    
T  24576183 ttaaatccattgaacaacctttgaagctttaagtattgcatctcctaatgaactttagcttctggtgatcttgcttatgatgatatgcttctgatgaact 24576282  T
Q  224 tgcttctgatga 235  Q
     |||||||||||    
T  24576283 agcttctgatga 24576294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 26619077 - 26618998
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcag 181  Q
    |||||||||||||||||  |||||||||| ||||||||||||||||||||| || ||| ||| |||||| ||| ||||||    
T  26619077 tcttctgcaatgataggcgtgattaaatcatttgaacaacctttgaagcttcaattctttcagcttctgttgatcttcag 26618998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 39037585 - 39037511
Alignment:
Q  134 tgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| | |||| |||||| ||  |||||||||||    
T  39037585 tgaacaacctttgaagttttaagtctctcatcttctgatcaactttaacttccggtgatcttcagcttctgatga 39037511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 20568705 - 20568596
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattg--cttctgatgaggtgttttttatg 219  Q
    |||||||||| | ||||| ||||| |||||||||||||  ||||| |||||||||| ||||||| |||||| |||  ||||| ||||| || || | |||    
T  20568705 gattaaatccatggaacagcctttaaagctttaagtcttgcatctcctgatgaactacagcttctggtgatcttgaacttcttatgagatgcttctgatg 20568606  T
Q  220 aacttgcttc 229  Q
    ||||||||||    
T  20568605 aacttgcttc 20568596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 38781544 - 38781657
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||  |||||||||||||||||||||||||||  |||| ||||||||    || |||| |||||| ||  |||||||||||| || || | |||    
T  38781544 gattaaatcaattgaacaacctttgaagctttaagtcttgcatcctctgatga--gacatcttctggtgatcttcagcttctgatgagatgcttctgatg 38781641  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  38781642 aacttgcttctgatga 38781657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 19115207 - 19115287
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagc 182  Q
    |||||||||||  ||||   |||||||| |||||||||||||||||||||| || ||| ||| |||||||||| |||||||    
T  19115207 tcttctgcaatagtaggcgagattaaattctttgaacaacctttgaagcttcaattctttcagcttctgatgatcttcagc 19115287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 28140574 - 28140491
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||| ||||| ||||||||||||||||| |||||||||  ||||| | |||||||||||||||| | ||| | ||||||||||||    
T  28140574 gattgaatccattgaacaacctttgaagttttaagtcttgcatctcccgatgaacttcagcttctgatgaga-tgcttctgatga 28140491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 30667134 - 30667249
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt-----gcttctgatgaggtgtttttt 216  Q
    |||||||||| ||||||||||||||||||||||| |||  ||||| |||||||||| || ||||   |||||||     |||||||||||| || || |     
T  30667134 gattaaatccattgaacaacctttgaagctttaattcttgcatctcctgatgaactacaacttc---tgatattcttcagcttctgatgagatgcttctg 30667230  T
Q  217 atgaacttgcttctgatga 235  Q
    | |||||||||||||||||    
T  30667231 acgaacttgcttctgatga 30667249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 13963933 - 13963878
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaact 177  Q
    |||||||||| ||||||||||||||||||||||| |||  ||||| ||||||||||    
T  13963933 gattaaatccattgaacaacctttgaagctttaaatcttgcatctactgatgaact 13963878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 18702862 - 18702940
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttca 180  Q
    ||||||| ||||||||   |||||||| | ||||||||||||||||||||| || ||| ||| |||||||||| |||||    
T  18702862 tcttctgtaatgatagacgtgattaaaacatttgaacaacctttgaagcttcaattctttcagcttctgatgatcttca 18702940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 28711808 - 28711772
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  28711808 agcagagacaaaaacagagtagtggaggtagtggttg 28711772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 30621361 - 30621447
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| |||||||||||||||| |||||| |||  ||||| |||||| ||| || ||||  ||||||||  |||||||||||    
T  30621361 gattaaatccattgaacaacctttgaacctttaattcttgcatctcctgatgcactacaacttctagtgatattcagcttctgatga 30621447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 30623982 - 30624068
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| |||||||||||||||| |||||| |||  ||||| |||||| ||| || ||||  ||||||||  |||||||||||    
T  30623982 gattaaatccattgaacaacctttgaacctttaattcttgcatctcctgatgcactacaacttctagtgatattcagcttctgatga 30624068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 40782642 - 40782729
Alignment:
Q  148 agctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||| |||||||  ||||| |||||||| || |||||| |||||| |||||||||||||  || || |  ||||||||||||||||||    
T  40782642 agctctaagtcttgcatctcctgatgaaatttagcttctggtgatcttgcttctgatgaaatgcttctggtgaacttgcttctgatga 40782729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Original strand, 26867243 - 26867273
Alignment:
Q  57 gacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||||||||||||||||||||||||    
T  26867243 gacaagaacagagtagtggaggtagtggttg 26867273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Original strand, 26879832 - 26879862
Alignment:
Q  57 gacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||||||||||||||||||||||||    
T  26879832 gacaagaacagagtagtggaggtagtggttg 26879862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 1586992 - 1586929
Alignment:
Q  127 aatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||| |||||| ||||||||||||||| || ||||| |||||||||| ||||||| ||||||    
T  1586992 aatcctttaaacaacttttgaagctttaagt-tc-catctcctgatgaactccagcttctggtgat 1586929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 6392624 - 6392659
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  6392624 agcagagacaa-aacagagtagtggaggtagtggttg 6392659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 22802451 - 22802486
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22802451 agcagagacaa-aacagagtagtggaggtagtggttg 22802486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 24275192 - 24275228
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||| |||||| |||||||||||||||||||||||||    
T  24275192 agcatagacaaaaacagagtagtggaggtagtggttg 24275228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 28551028 - 28550992
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  28551028 agcagagacaaaaacagagtagtggagatagtggttg 28550992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 31328075 - 31328040
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  31328075 agcagagacaa-aacagagtagtggaggtagtggttg 31328040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 31334796 - 31334761
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  31334796 agcagagacaa-aacagagtagtggaggtagtggttg 31334761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 31800997 - 31800961
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  31800997 agcagagacaaaaacagagtagtggagatagtggttg 31800961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 31968153 - 31968117
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  31968153 agcagagacaaaaacagagtagtggagatagtggttg 31968117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 33074216 - 33074252
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  33074216 agcagagacaaaaacagagtagtggagatagtggttg 33074252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 41121829 - 41121793
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||  |||||||||||||||||||||||||    
T  41121829 agcagagacacaaacagagtagtggaggtagtggttg 41121793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 44840424 - 44840460
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  44840424 agcagagacaaaaacagagtagtggagatagtggttg 44840460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 239
Target Start/End: Original strand, 13692489 - 13692606
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||||||||| ||| |||||| |||||| |||||||||| ||| || || | |||||    
T  13692489 gattaaatccattgaacaacctttgaagctttaagtcttacatcttctgatgagctttagcttctggtgatcttgcttctgaagagatgcttctgatgaa 13692588  T
Q  222 cttgcttctgatgatgtc 239  Q
    ||||||||||||||||||    
T  13692589 cttgcttctgatgatgtc 13692606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 16316569 - 16316455
Alignment:
Q  121 tgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatga 220  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||  ||||||||||||| |||| |||||| |||||||||||||| || || | ||||    
T  16316569 tgattaaatccattgaacaacctttgaagctttaagtcttgcatcccctgatgaacttcaacttctggtgatcttgcttctgatgagatgcttctgatga 16316470  T
Q  221 acttgcttctgatga 235  Q
    |||||||||||||||    
T  16316469 acttgcttctgatga 16316455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 13894041 - 13893949
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||||| ||| |||||||||||| ||||  ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  13894041 cactcttctggtcttctgcaatgctaggcgtgattaaatcctttgaacaacctttgaagctttaagtatttcatcttctgatgatcttcagct 13893949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 91 - 206
Target Start/End: Complemental strand, 39284607 - 39284490
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| ||| ||||| |||||| ||||  ||||||||||||||||||| ||||||||||||| | |||||||||||||||||| |||||||||| ||||    
T  39284607 cactcttctggtcttcagcaatgctaggcgtgattaaatcctttgaacagcctttgaagctttgattctctcatcttctgatgatcttcagcttctggtg 39284508  T
Q  191 atatt--gcttctgatga 206  Q
    || ||  |||||||||||    
T  39284507 atcttcagcttctgatga 39284490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 12366759 - 12366642
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| ||||||| || |||||||||||||| |  || || |||||||||||||||||| |||||  |||||||||||||| || |||| |||||    
T  12366759 gattaaatccattgaacagcccttgaagctttaagttttgcacctcctgatgaacttcagcttctggtgaccttgcttctgatgagatgcttttgatgaa 12366660  T
Q  222 cttgcttctgatgatgtc 239  Q
    |||| |||||||||||||    
T  12366659 cttgattctgatgatgtc 12366642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 21283384 - 21283271
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | ||||||||||||| |||| |||||| |||||||||||||| |  || | |||||    
T  21283384 gattaaatccattgaacaacctttgaagctttaagtcttgcatatcctgatgaacttcaacttctggtgatcttgcttctgatgagattcttctgatgaa 21283285  T
Q  222 cttgcttctgatga 235  Q
    |||| |||||||||    
T  21283284 cttgattctgatga 21283271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 11793054 - 11793162
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||| ||| ||||||||||||| |||||||||||||  ||||| |||||||||||||||||| |||||| ||  |||||||||||| ||||| | |||    
T  11793054 gattaagtccattgaacaacctttaaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctttagcttctgatgagatgtttatgatg 11793153  T
Q  220 aacttgctt 228  Q
    |||||||||    
T  11793154 aacttgctt 11793162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 22578032 - 22577919
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||  ||||||| |||||||||||||||||||  ||||| |||||||||||||||||| |||||| |||| ||||||||| || || | ||||     
T  22578032 gattaaatctattgaacaccctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcctctgatgagatgcttctgatgac 22577933  T
Q  222 cttgcttctgatga 235  Q
    ||||||||| ||||    
T  22577932 cttgcttctaatga 22577919  T

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Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 207
Target Start/End: Complemental strand, 29935401 - 29935285
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| ||| |||||||||||| || || |||||||||   ||||||||||||||||  |||||||||  ||||| ||||||||||| |||||| ||||    
T  29935401 cactcttctggtcttctgcaatgttaagtgtgattaaatatattgaacaacctttgaaattttaagtcttgcatctcctgatgaactttagcttctggtg 29935302  T
Q  191 atattgcttctgatgag 207  Q
    || ||||||||||||||    
T  29935301 atcttgcttctgatgag 29935285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 123 - 206
Target Start/End: Original strand, 24788289 - 24788372
Alignment:
Q  123 attaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    ||||||||  |||||||||||||||||||||||||||  ||||| || ||||||||||||||| |||||| |||||||||||||    
T  24788289 attaaatctattgaacaacctttgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgatcttgcttctgatga 24788372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 28409186 - 28409300
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtga-tattgcttctgatgaggtgttttttatga 220  Q
    |||||||||| |||||||||||||||||| ||| ||||  |||||  |||||||||| |||||| ||||| | |||||||||||||| || || | ||||    
T  28409186 gattaaatccattgaacaacctttgaagccttatgtcttgcatctcttgatgaactttagcttctggtgactgttgcttctgatgagatgcttctgatga 28409285  T
Q  221 acttgcttctgatga 235  Q
    |||||||||||||||    
T  28409286 acttgcttctgatga 28409300  T

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Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 10883184 - 10883072
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||||||||||| ||||||||||  ||||| |||||||||| ||||||| |||||| ||  |||||||||| | || || | |||    
T  10883184 gattaaatccattgaacaacctttgaaactttaagtcttgcatctcctgatgaactacagcttctggtgatcttcagcttctgatgggatgcttctgatg 10883085  T
Q  220 aacttgcttctga 232  Q
    |||||||||||||    
T  10883084 aacttgcttctga 10883072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 41842272 - 41842209
Alignment:
Q  134 tgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgct 198  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  41842272 tgaacaacctttgaagctt-aagtctctcatcttctgatgaacttcagcttctggtgatcttgct 41842209  T

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Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 4494653 - 4494716
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttc 185  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  4494653 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttc 4494716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 9098272 - 9098207
Alignment:
Q  120 atgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttc 185  Q
    ||||||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  9098272 atgattaaatattttgaacagcctttgaagctttaattctctcatcttctgatgatcttcagcttc 9098207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 13260614 - 13260521
Alignment:
Q  142 ctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||| ||||||||||||  ||||| ||||||||||| |||||| |||||| |||||||| ||||| || || | |||||||||||||||||||    
T  13260614 ctttggagctttaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctaatgagatgcttatgatgaacttgcttctgatga 13260521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 13648876 - 13648960
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| ||||||| | |||||||||||||||||| ||||| ||||||| ||| |||||| | |||| |||||||||||||    
T  13648876 gattaaatccattgaacatcttttgaagctttaagtctcgcatctcctgatgagctttagcttctgttgatcttgcttctgatga 13648960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 19237086 - 19236994
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||||| ||| |||||||||||| |||    |||||||||||||||||| ||||||||||||||| |||||||||||||| | | ||||||||    
T  19237086 cactcttctggtcttctgcaatgctagacgagattaaatcctttgaacagcctttgaagctttaactctctcatcttctggtaatcttcagct 19236994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 21695548 - 21695634
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| ||||||||| |||||||||||||||||  |||||  ||||||||||||||||| |||||| ||  |||||||||||    
T  21695548 gattaaatccattgaacaacttttgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatcttcagcttctgatga 21695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 13302958 - 13303027
Alignment:
Q  123 attaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    ||||||||| |||||||||||||||||||||||||||  ||||| || ||||||| ||||||| ||||||    
T  13302958 attaaatccattgaacaacctttgaagctttaagtcttgcatctcctaatgaactacagcttctggtgat 13303027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 44467211 - 44467298
Alignment:
Q  122 gattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| ||||||||||||| ||||||||||||||  ||||| |||||||||||||||||  |||||| ||  |||||||||||    
T  44467211 gattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctgatgaacttcagcttttggtgatcttcagcttctgatga 44467298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 13032115 - 13032045
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacc-tttgaagctttaagtctc 160  Q
    |||||||||| |||||||||||  ||||  ||||||||||| |||||||||| ||||||||||||||||||    
T  13032115 cactctcctggtcttctgcaatactaggcgtgattaaatccattgaacaaccatttgaagctttaagtctc 13032045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 30945367 - 30945285
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| ||||||||||||||||||||||||  |  ||||| |||||||||| ||||||| | |||  |||||||||||||    
T  30945367 gattaaatccgttgaacaacctttgaagctttaag--ttgcatctcctgatgaactgcagcttctgatgaacttgcttctgatga 30945285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 9069710 - 9069825
Alignment:
Q  123 attaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatg-aggtgttttttatg 219  Q
    ||||||||| ||||||||||||||||||||||||| |  ||||| |||||||| |  |||||| |||||| ||  |||||||||| |  ||||| | ||     
T  9069710 attaaatcccttgaacaacctttgaagctttaagttttgcatctcctgatgaaatagagcttctggtgattttcagcttctgatgaacttgtttctgata 9069809  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  9069810 aacttgcttctgatga 9069825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 210
Target Start/End: Complemental strand, 13018548 - 13018428
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggt 189  Q
    |||||||||  |||||||||||  | ||  ||||||||||| ||||||| ||||| |||||||||||||||   |||||  ||||||||||||||| |||    
T  13018548 cactctcctagtcttctgcaatactgggcgtgattaaatccattgaacagccttttgaagctttaagtctcg--tcttcatatgaacttcagcttctggt 13018451  T
Q  190 gatat--tgcttctgatgaggtg 210  Q
    ||| |  ||||||||||||||||    
T  13018450 gatcttctgcttctgatgaggtg 13018428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 13880715 - 13880775
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctc 162  Q
    |||||||||||| ||||  |||||||||| |||||||| ||||||||||||||| ||||||    
T  13880715 tcttctgcaatgctaggcgtgattaaatcttttgaacagcctttgaagctttaattctctc 13880775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 15468063 - 15468178
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||  ||||||| |||||||||||||||||||  ||||| ||||||||||  |||||| ||| || ||  || ||||||||| ||  | | |||    
T  15468063 gattaaatctattgaacaccctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtaatcttcagcatctgatgagatgcatatgatg 15468162  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  15468163 aacttgcttctgatga 15468178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 206
Target Start/End: Original strand, 331806 - 331877
Alignment:
Q  136 aacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    ||||||||||||||||||||||| | ||||| |||||| ||||||||||| |||||| ||  |||||||||||    
T  331806 aacaacctttgaagctttaagtc-cgcatctcctgatggacttcagcttctggtgatcttcagcttctgatga 331877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 11319552 - 11319660
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||| |||||||||||| ||||||  |||||  |||||| || || |||| |||||| ||  |||||||||||| || || | |||    
T  11319552 gattaaatccattgaacatcctttgaagcttgaagtcttgcatctcttgatgacctacaacttctggtgatcttcagcttctgatgagatgcttctgatg 11319651  T
Q  220 aacttgctt 228  Q
    |||||||||    
T  11319652 aacttgctt 11319660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 21692445 - 21692517
Alignment:
Q  133 ttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    ||||| ||| |||||||||||||||||  ||||| || ||||||||||||||| | ||||| ||||||||||||    
T  21692445 ttgaataacttttgaagctttaagtcttgcatctcctaatgaacttcagcttctgatgata-tgcttctgatga 21692517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 4821466 - 4821502
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4821466 agcagagacaaaaacagagtagtggaggtagtggttg 4821502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 22578187 - 22578151
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22578187 agcagagacaaaaacagagtagtggaggtagtggttg 22578151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 27871710 - 27871746
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  27871710 agcagagacaaaaacagagtagtggaggtagtggttg 27871746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 185
Target Start/End: Complemental strand, 30944334 - 30944273
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttc 185  Q
    |||||||||| ||||||||||||||||||||||||  |  ||||| |||||||||| |||||||    
T  30944334 gattaaatccgttgaacaacctttgaagctttaag--ttgcatctcctgatgaactgcagcttc 30944273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 30944489 - 30944453
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  30944489 agcagagacaaaaacagagtagtggaggtagtggttg 30944453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 44467056 - 44467092
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  44467056 agcagagacaaaaacagagtagtggaggtagtggttg 44467092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 33691878 - 33691843
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggtt 86  Q
    ||||||||||| ||||||||||||||||||||||||    
T  33691878 agcagagacaaaaacagagtagtggaggtagtggtt 33691843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 9098210 - 9098140
Alignment:
Q  165 cttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||||||||   | ||||| ||||||| ||||| |||||||||| || | |||||||||||||||||||    
T  9098210 cttctgatgaaaaactgcttctggtgataatgcttttgatgaggtgcttctaatgaacttgcttctgatga 9098140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 13137906 - 13137836
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| ||||  |||||||||||||||||||||  ||||| || |||||||  |||||| ||||||    
T  13137906 gattaaatccattgattaacctttgaagctttaagtcttgcatctccttatgaactagagcttctggtgat 13137836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 13730686 - 13730652
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaag 156  Q
    |||||||||| ||||||||||||||||||||||||    
T  13730686 gattaaatccattgaacaacctttgaagctttaag 13730652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 15088667 - 15088737
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| ||||||| |||||||||||||| ||||  ||||| |||||||| |  |||||| ||||||    
T  15088667 gattaaatccattgaacagcctttgaagctttacgtcttgcatctcctgatgaattagagcttctggtgat 15088737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 33691723 - 33691653
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| || |||| |||||||||||||| ||||  ||||| ||||||||||  |||||| ||||||    
T  33691723 gattaaatccatttaacagcctttgaagctttatgtcttgcatctcctgatgaactagagcttctggtgat 33691653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 159
Target Start/End: Original strand, 2500185 - 2500222
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtct 159  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  2500185 gattaaatccattgaacaacatttgaagctttaagtct 2500222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 14426542 - 14426575
Alignment:
Q  54 agagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||| |||||||||||||||||||||||||    
T  14426542 agagacaaaaacagagtagtggaggtagtggttg 14426575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 21283536 - 21283503
Alignment:
Q  54 agagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||| |||||||||||||||||||||||||    
T  21283536 agagacaaaaacagagtagtggaggtagtggttg 21283503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 24788136 - 24788169
Alignment:
Q  54 agagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||| |||||||||||||||||||||||||    
T  24788136 agagacaaaaacagagtagtggaggtagtggttg 24788169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 28409034 - 28409067
Alignment:
Q  54 agagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||| |||||||||||||||||||||||||    
T  28409034 agagacaaaaacagagtagtggaggtagtggttg 28409067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 5000832 - 5000784
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctg 170  Q
    |||| ||||| ||||||||||||||||||| |||||||  |||||||||    
T  5000832 gattgaatccattgaacaacctttgaagctctaagtcttgcatcttctg 5000784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 8182922 - 8182958
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  8182922 agcagagacaaaaacagagtagtggagatagtggttg 8182958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 9069554 - 9069590
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  9069554 agcagagacaaaaactgagtagtggaggtagtggttg 9069590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 14193241 - 14193336
Alignment:
Q  142 ctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||||||||||||||||  |||||  |||||||||  |||||  |||||| ||  ||||||||| || || || | |||||||||||||||||||    
T  14193241 ctttgaagctttaagtcttgcatctcttgatgaactagagcttatggtgatcttctgcttctgataagatgcttatgatgaacttgcttctgatga 14193336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 16112050 - 16112014
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  16112050 agcagagacaaaaacagagtagtggagatagtggttg 16112014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 19236956 - 19236908
Alignment:
Q  187 ggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||| ||||||||||||||||| || | | |||||||||||||||||    
T  19236956 ggtgatgttgcttctgatgaggtggttctgacgaacttgcttctgatga 19236908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 24794881 - 24794845
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  24794881 agcagagacaaaaacagagtagtggaagtagtggttg 24794845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 48236913 - 48236829
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||| ||||| ||||||||| ||||||||||||||  |  ||||| |||||||||| ||||||| |||||| ||  |||||||||||    
T  48236913 gattgaatccattgaacaacttttgaagctttaag--ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 48236829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 48237068 - 48237032
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  48237068 agcagagacaaaaacaaagtagtggaggtagtggttg 48237032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 6137 - 6241
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttct 201  Q
    |||||||||||| ||||  |||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||    
T  6137 tcttctgcaatgctaggcgtgattaaatcctttgaacagtctttgaagctttaaatctctcatcttctgatgaacttcaacttctagtgatattgcttct 6236  T
Q  202 gatga 206  Q
    |||||    
T  6237 gatga 6241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 74717 - 74831
Alignment:
Q  121 tgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatga 220  Q
    ||||||||||||||||||||||||||||||||||| |||| || ||||||||||  ||||||||| |||||| ||| ||||||||||||| || | ||||    
T  74717 tgattaaatcctttgaacaacctttgaagctttaattctcacagcttctgatgatgttcagcttctggtgatgttgtttctgatgaggtgcttatgatga 74816  T
Q  221 acttgcttctgatga 235  Q
    |||||||| ||||||    
T  74817 acttgcttatgatga 74831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 36165 - 36032
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttct 201  Q
    ||||||||||||||||   ||||||||||  |||||||||||||||||||| || | |||||  ||||||||| |||||||||  |||||| ||||||||    
T  36165 tcttctgcaatgatagacgtgattaaatcaattgaacaacctttgaagcttcaattttctcagattctgatgatcttcagcttatggtgatgttgcttct 36066  T
Q  202 gatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||||||| || | |||||||||||||||||||    
T  36065 gatgaggtgcttctgatgaacttgcttctgatga 36032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 34919 - 34883
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  34919 agcagagacaaaaacagagtagtggaggtagtggttg 34883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 25777 - 25744
Alignment:
Q  54 agagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||| |||||||||||||||||||||||||    
T  25777 agagacaaaaacagagtagtggaggtagtggttg 25744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 33256281 - 33256164
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||| ||||||| |||||| |||||| |||||||||||||| || || | |||||    
T  33256281 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgttgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaa 33256182  T
Q  222 cttgcttctgatgatgtc 239  Q
    |||||||||||| |||||    
T  33256181 cttgcttctgataatgtc 33256164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 33276453 - 33276336
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||| ||||||| |||||| |||||| |||||||||||||| || || | |||||    
T  33276453 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctggtgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaa 33276354  T
Q  222 cttgcttctgatgatgtc 239  Q
    |||||||||||| |||||    
T  33276353 cttgcttctgataatgtc 33276336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 48704354 - 48704467
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||| | |||||||||||| || || | |||||    
T  48704354 gattaaatccattgaacaacctttgaagctttaagtcttgcatcttctgatgaactttagcttctggtgatctagcttctgatgagatgcttctgatgaa 48704453  T
Q  222 cttgcttctgatga 235  Q
    || |||||||||||    
T  48704454 ctagcttctgatga 48704467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 19717674 - 19717787
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |  |||||||| |||||| |||||| |||||||||||||| || || | |||||    
T  19717674 gattaaatccattgaacaacctttgaagctttaagtcttgcatctccatatgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaa 19717773  T
Q  222 cttgcttctgatga 235  Q
    ||||||| ||||||    
T  19717774 cttgcttatgatga 19717787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 12284573 - 12284657
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||| ||||| ||||||||||||||||||| |||||||  |||||||||||||||||||||||| |||||| |||||||||||||    
T  12284573 gattgaatccattgaacaacctttgaagctctaagtcttgcatcttctgatgaacttcagcttctggtgatcttgcttctgatga 12284657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 17024896 - 17024811
Alignment:
Q  121 tgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||||||||||||  | |||||||||||| ||||||| |||||||||| |||||||||| |||||| |||||||||||||    
T  17024896 tgattaaatcctttgaacagacattgaagctttaattctctcagcttctgatgatcttcagcttctggtgatgttgcttctgatga 17024811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 22600112 - 22599993
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||| ||||||||||  |||||| |||||| ||  |||||||||||| || || | ||     
T  22600112 gattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatctttagcttctgatgagatgcttctgata 22600013  T
Q  220 aacttgcttctgatgatgtc 239  Q
    ||||||||||||||||||||    
T  22600012 aacttgcttctgatgatgtc 22599993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 2268678 - 2268792
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtga-tattgcttctgatgaggtgttttttatga 220  Q
    |||||||||| |||||||||||||||||| ||||||||  ||||| || |||||||| ||||||  |||| | |||||||||||||| || || | ||||    
T  2268678 gattaaatccattgaacaacctttgaagccttaagtcttgcatctcctaatgaactttagcttctagtgattgttgcttctgatgagatgcttctgatga 2268777  T
Q  221 acttgcttctgatga 235  Q
    |||||||||||||||    
T  2268778 acttgcttctgatga 2268792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 12613777 - 12613700
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttc 168  Q
    |||||| ||| |||||||||||| ||||  |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  12613777 cactcttctggtcttctgcaatgctaggcgtgattaaatcttttgaacaacctttgaagctttaaatctctcatcttc 12613700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 20954403 - 20954288
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||  |||||| |||||| ||  |||||||||||| || || | |||    
T  20954403 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgagatgcttctgatg 20954304  T
Q  220 aacttgcttctgatga 235  Q
    ||||||  ||||||||    
T  20954303 aacttgaatctgatga 20954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 22154007 - 22154077
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||| |||||||||||||||||| ||||||    
T  22154007 gattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 22154077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 10757571 - 10757656
Alignment:
Q  122 gattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| ||||||||||||| ||||||||||||||  ||||| |||||||||||||||||  | |||| |||||||||||||    
T  10757571 gattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctgatgaacttcagcttttgatgatcttgcttctgatga 10757656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 38282716 - 38282831
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||  |||||  |||||| ||  || ||||||||| || || | ||     
T  38282716 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttttggtgatctttagcatctgatgagatgcttctgata 38282815  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  38282816 aacttgcttctgatga 38282831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 21191827 - 21191694
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtg 190  Q
    |||||| ||| |||||||||||| | ||| ||||||||| ||||||||||||||||||||||||| | ||           ||||||||||||||  |||    
T  21191827 cactcttctggtcttctgcaatgttgggtgtgattaaatactttgaacaacctttgaagctttaaatgtc-----------tgaacttcagcttcttgtg 21191739  T
Q  191 atattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||| |||||||||| || ||   |||||||||||||||||||    
T  21191738 atattgtttctgatgagatgcttcagatgaacttgcttctgatga 21191694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 23036457 - 23036340
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||| | |||||||||||||||||||  |||||||||||||    ||||||| |||||| ||  |||||||||||| || || | |||    
T  23036457 gattaaatccattgaatagcctttgaagctttaagtcttgcatcttctgatga--gacagcttctggtgatcttcagcttctgatgagatgcttctgatg 23036360  T
Q  220 aacttgcttctgatgatgtc 239  Q
    || |||||||||||||||||    
T  23036359 aaattgcttctgatgatgtc 23036340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 35401959 - 35402072
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||  ||||||||||||||||||  |||||||||||||    ||||||| |||||| ||  |||||||||||| || || | |||    
T  35401959 gattaaatccattgaacagtctttgaagctttaagtcttgcatcttctgatga--gacagcttctggtgatcttcagcttctgatgagatgcttctgatg 35402056  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  35402057 aacttgcttctgatga 35402072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 26702045 - 26701989
Alignment:
Q  136 aacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||| |||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  26702045 aacagcctttgaagctttaagtctcccatcttctgatgaactttagcttctggtgat 26701989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 1578017 - 1578108
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttt 213  Q
    |||||||||  ||||||||||||||||||| |||||||  ||||| ||||| ||||| ||||||  ||||| |||||||||| ||| |||||    
T  1578017 gattaaatctattgaacaacctttgaagctctaagtcttgcatctcctgataaactttagcttcttgtgatcttgcttctgacgagatgttt 1578108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 28492333 - 28492279
Alignment:
Q  123 attaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaact 177  Q
    ||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||    
T  28492333 attaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaact 28492279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 1900495 - 1900550
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaact 177  Q
    |||||||||| ||||| |||||||||||||||||||||  ||||| ||||||||||    
T  1900495 gattaaatccattgaataacctttgaagctttaagtcttgcatctcctgatgaact 1900550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 21028943 - 21029029
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||| | ||||||||| | |||||||||||||||||||| |||| ||||  ||||||||| |||||| ||  |||||||||||    
T  21028943 gattaaattcattgaacaacatatgaagctttaagtctctcatattctaatgatattcagcttctggtgatcttcagcttctgatga 21029029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 12284648 - 12284689
Alignment:
Q  165 cttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  12284648 cttctgatgaacttcagcttctggtgatcttgcttctgatga 12284689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 30893254 - 30893327
Alignment:
Q  134 tgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||||| ||| ||||||||||  ||||| ||||||||||| |||||  |||||| |||||||||||||    
T  30893254 tgaacaaccttttgaaactttaagtcttgcatctcctgatgaactttagcttttggtgatcttgcttctgatga 30893327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 1900340 - 1900376
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1900340 agcagagacaaaaacagagtagtggaggtagtggttg 1900376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 12613658 - 12613610
Alignment:
Q  187 ggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||| ||||||||||||||||| || | |||||||||||||||||||    
T  12613658 ggtgatgttgcttctgatgaggtggttctaatgaacttgcttctgatga 12613610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 22153852 - 22153888
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22153852 agcagagacaaaaacagagtagtggaggtagtggttg 22153888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 25448651 - 25448615
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25448651 agcagagacaaaaacagagtagtggaggtagtggttg 25448615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 35040161 - 35040197
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  35040161 agcagagacaaaaacagagtagtggaggtagtggttg 35040197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 36134185 - 36134221
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  36134185 agcagagacaaaaacagagtagtggaggtagtggttg 36134221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 36134339 - 36134391
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatga 174  Q
    |||||||||| |||||||||||||||| ||||||||||   ||||||||||||    
T  36134339 gattaaatccattgaacaacctttgaaactttaagtcttgtatcttctgatga 36134391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Complemental strand, 20195774 - 20195744
Alignment:
Q  57 gacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||||||||||||||||||||||||    
T  20195774 gacaagaacagagtagtggaggtagtggttg 20195744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 7309973 - 7310061
Alignment:
Q  127 aatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttt 213  Q
    ||||| ||||||| | |||||||||||||||||  ||||| ||||||| ||| |||||  |||||| ||  |||||||||||| |||||    
T  7309973 aatccattgaacagcttttgaagctttaagtcttgcatctcctgatgagctttagcttatggtgatcttcagcttctgatgagatgttt 7310061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 2267239 - 2267271
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagcttta 154  Q
    |||||||||| ||||||||||||||||||||||    
T  2267239 gattaaatccattgaacaacctttgaagcttta 2267271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 2268526 - 2268562
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  2268526 agcagagacaaaaacagagtagtcgaggtagtggttg 2268562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 2327525 - 2327489
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| | |||||||||||||||||||||||    
T  2327525 agcagagacaaaaccagagtagtggaggtagtggttg 2327489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 21121149 - 21121113
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  21121149 agcagagacaaaaacagagtagtggaagtagtggttg 21121113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 21702809 - 21702845
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  21702809 agcagagacaaaaacagagtagtggagatagtggttg 21702845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 22427442 - 22427406
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  22427442 agcagagacaaaaacaaagtagtggaggtagtggttg 22427406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 22600267 - 22600231
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  22600267 agcagagacaaaaacagagtagtggagatagtggttg 22600231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 37642243 - 37642279
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  37642243 agcagagacaaaaacagagtagtggaagtagtggttg 37642279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 38282562 - 38282598
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  38282562 agcagagacaaaaacagagtagtggagatagtggttg 38282598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 39201077 - 39201041
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||| |||| |||||||||||||||||||||||||    
T  39201077 agcagaaacaaaaacagagtagtggaggtagtggttg 39201041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 46088984 - 46089020
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  46088984 agcagagacaaaaacagagtagtggagatagtggttg 46089020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 48570316 - 48570280
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  48570316 agcagagacaaaaacagagtagtggagatagtggttg 48570280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 220400 - 220503
Alignment:
Q  134 tgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatgaacttgcttctg 231  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||  ||||||||||||||| || | |||||||||||||||    
T  220400 tgaacagcctttgaagctttaagtctctcatctcctgatgaacttcagcttctggtgatcttcagcttctgatgaggtgcttctgatgaacttgcttctg 220499  T
Q  232 atga 235  Q
    ||||    
T  220500 atga 220503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 377519 - 377404
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| || |||||| ||||||| |||||||||  ||||| ||||||||||  | |||| |||||| ||  |||||||||||| || || | |||    
T  377519 gattaaatccattcaacaacatttgaagttttaagtcttgcatctcctgatgaactataacttctggtgatcttcagcttctgatgagatgcttctgatg 377420  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  377419 aacttgcttctgatga 377404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 244276 - 244185
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||||| ||| |||||||||| |  |||  |||||||||| |||||||| |||||||| ||| || ||||||||||||| |||| ||||||||    
T  244276 cactcttctggtcttctgcaacgccaggcgtgattaaatcttttgaacagcctttgaaacttcaattctctcatcttct-atgatcttcagct 244185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 244152 - 244098
Alignment:
Q  181 gcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||| |||||| ||||||||||||||||  |||| |||||||||||| ||||||    
T  244152 gcttctggtgatgttgcttctgatgaggtacttttgatgaacttgcttttgatga 244098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 211394 - 211430
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  211394 agcagagacaaaaacagagtagtggaggtagtagttg 211430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 5650 - 5537
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| |||||||||||||||||| |||||| ||||||||  |||| || || | |||||    
T  5650 gattaaatccattgaacaacctttgaagctctaagtcttgcatctcctgatgaacttcagcttcaggtgatcttgcttctagtgagatgcttctgatgaa 5551  T
Q  222 cttgcttctgatga 235  Q
    ||||||||||||||    
T  5550 cttgcttctgatga 5537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 62; Significance: 8e-27; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 60167 - 60280
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||| |||||| |||||| |||||||| ||||| || || | |||||    
T  60167 gattaaatccattgaacatcctttgaagctttaagtcttgcatcttctgatgaactttagcttctggtgatcttgcttcttatgagatgcttctaatgaa 60266  T
Q  222 cttgcttctgatga 235  Q
    ||||| ||||||||    
T  60267 cttgcatctgatga 60280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 151851 - 151783
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctg 170  Q
    |||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  151851 tcttctacaatactaggtgtgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctg 151783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 8077 - 8161
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| ||||||||||||||||||||||||| |  ||||| ||||||||||| |||||| ||| || |||||||||||||    
T  8077 gattaaatccattgaacaacctttgaagctttaagttttgcatctcctgatgaactttagcttctggttatcttgcttctgatga 8161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 115712 - 115785
Alignment:
Q  162 catcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||| ||||||||| |||||||| |||||| |||||||||||||| || || | || ||||||||| ||||||    
T  115712 catctcctgatgaacatcagcttctggtgatcttgcttctgatgagatgcttctgataaacttgcttttgatga 115785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 19470800 - 19470933
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttct 201  Q
    |||| ||||||| ||||  ||||||||||  |||||||||||||||||||| |  ||||||||||| |||||| ||||| ||||  ||||| ||||||||    
T  19470800 tcttgtgcaatgctaggcgtgattaaatctgttgaacaacctttgaagcttcagttctctcatcttttgatgatcttcaacttcttgtgatgttgcttct 19470899  T
Q  202 gatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||||||| || | |||||||||||||||||||    
T  19470900 gatgaggtgcttctgatgaacttgcttctgatga 19470933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 10640448 - 10640364
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaa 175  Q
    |||||| ||| |||||||||||| ||||  ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  10640448 cactcttctggtcttctgcaatgctaggcgtgattaaatcctttgaacaacctttgaagctttaattctctcagcttctgatgaa 10640364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 13435683 - 13435798
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||| | |||||||||||||||||||  ||||| |||||||||||||||||  |||||| |  ||||||||||||| || |||| |||    
T  13435683 gattaaatccattgaaaatcctttgaagctttaagtcttgcatctcctgatgaacttcagcttatggtgatcttctgcttctgatgagatgcttttgatg 13435782  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  13435783 aacttgcttctgatga 13435798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 23284715 - 23284830
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||||| |||||||||||||||||  ||||| ||||||||||||||||||  | ||| |  ||||||||||||| || || | |||    
T  23284715 gattaaatccattgaacaacatttgaagctttaagtcttgcatctcctgatgaacttcagcttctagcgatcttctgcttctgatgagatgcttctaatg 23284814  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  23284815 aacttgcttctgatga 23284830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 19624130 - 19624215
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgag 207  Q
    |||| ||||| |||||||||||||||||||||||| ||  ||||| |||||||||||||||||| |||||| ||| ||||||||||    
T  19624130 gattgaatccattgaacaacctttgaagctttaagacttgcatctcctgatgaacttcagcttctggtgatcttgtttctgatgag 19624215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 13602323 - 13602438
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||  ||||||  ||||| ||  |||| ||||||| || || | |||    
T  13602323 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactatagcttcttgtgatcttcggcttttgatgagatgcttctgatg 13602422  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  13602423 aacttgcttctgatga 13602438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 15531622 - 15531503
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatgaggtgttttttatg 219  Q
    |||||||| | ||||||||||||| |||||||||||||  |||||||||||||||| || |||| |||||| |  || |||||||||| || || | |||    
T  15531622 gattaaattcattgaacaacctttcaagctttaagtcttgcatcttctgatgaactacaacttctggtgatcttatgattctgatgagatgcttctgatg 15531523  T
Q  220 aacttgcttctgatgatgtc 239  Q
    |||||||||||||| |||||    
T  15531522 aacttgcttctgattatgtc 15531503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 9717994 - 9718109
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||  ||||||  ||||| ||   ||||||||| | || || | ||     
T  9717994 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctagtgatctttaacttctgatgggatgcttatgata 9718093  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  9718094 aacttgcttctgatga 9718109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 14100438 - 14100355
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| ||||||| |||||||| ||||||||||  ||||| |||||||||||||||||| | ||| | ||||||||||||    
T  14100438 gattaaatccattgaacatcctttgaaactttaagtcttgcatctcctgatgaacttcagcttctgatgaga-tgcttctgatga 14100355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 15302351 - 15302435
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| ||||||||||||||| |||||||||||  ||||| || |||| ||| |||||  |||||| |||||||||||||    
T  15302351 gattaaatccattgaacaacctttgacgctttaagtcttgcatctcctaatgagctttagcttttggtgatcttgcttctgatga 15302435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 15987385 - 15987437
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatga 174  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  15987385 gattaaatccattgaacatcctttgaagctctaagtctctcatcttctgatga 15987437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 24116979 - 24117059
Alignment:
Q  122 gattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttct 201  Q
    |||| ||||| ||||||| ||||| ||||||||||||||  ||||||||||||||||||| |||| |||||| ||||||||    
T  24116979 gattgaatccattgaacagccttttgaagctttaagtcttgcatcttctgatgaacttcatcttctggtgatcttgcttct 24117059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 25597630 - 25597745
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||| |||||||||||||||||||  ||| | |||||||||| || |||| |||||| ||  |||| ||||||| || || | |||    
T  25597630 gattaaatccattgaacatcctttgaagctttaagtcttgcatgtcctgatgaactacaacttctggtgatcttcagcttatgatgagatgcttctgatg 25597729  T
Q  220 aacttgcttctgatga 235  Q
    |||||||||| |||||    
T  25597730 aacttgcttcagatga 25597745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 19688920 - 19688996
Alignment:
Q  125 taaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctga 203  Q
    ||||||| ||||||||||||||||||||||||  || ||||| |||||||||||||||||| | |||  ||||||||||    
T  19688920 taaatccattgaacaacctttgaagctttaag--tcgcatctcctgatgaacttcagcttctgatgaacttgcttctga 19688996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 29918179 - 29918250
Alignment:
Q  134 tgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatg 205  Q
    ||||||||||||||||||||||||||  ||||| |||||||||| ||||||| | |||  ||||||||||||    
T  29918179 tgaacaacctttgaagctttaagtcttgcatctcctgatgaactacagcttctgatgaacttgcttctgatg 29918250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 32544416 - 32544471
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaact 177  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||    
T  32544416 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaact 32544471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 26943734 - 26943828
Alignment:
Q  141 cctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||||||| | ||| ||||||||| |||||||| |||||||||   ||||| |||||||| |||||||| || | | |||||||||||||||||    
T  26943734 cctttgaagttataattctctcatcatctgatgatcttcagcttttagtgatgttgcttctaatgaggtgcttctgacgaacttgcttctgatga 26943828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 12715418 - 12715333
Alignment:
Q  122 gattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| ||||||| ||||| ||||||||||||||  ||||| |||||||||| || ||||  ||||| |||||||||||||    
T  12715418 gattaaatccattgaacagccttttgaagctttaagtcttgcatctcctgatgaactacaacttctagtgatcttgcttctgatga 12715333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 20112698 - 20112627
Alignment:
Q  122 gattaaatcctttgaacaacctttg-aagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| |||||||||||||  |||||||||||||  |||||  ||||||||||||||||| ||||||    
T  20112698 gattaaatccattgaacaacctttttaagctttaagtcttgcatctcttgatgaacttcagcttcaggtgat 20112627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 26972226 - 26972140
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatga 206  Q
    |||||||||| ||||||||| |||||||||||||||||  ||||| |||||||| |  |||||| |||||| |  ||||||||||||    
T  26972226 gattaaatccattgaacaacatttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttctgcttctgatga 26972140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 21625251 - 21625303
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatga 174  Q
    |||||||||| ||||||||||||||||||| |||||||  ||||| |||||||    
T  21625251 gattaaatccattgaacaacctttgaagctgtaagtcttgcatctcctgatga 21625303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 87
Target Start/End: Original strand, 9717841 - 9717875
Alignment:
Q  53 cagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||| |||||||||||||||||||||||||    
T  9717841 cagagacaaaaacagagtagtggaggtagtggttg 9717875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 15954702 - 15954735
Alignment:
Q  54 agagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||| |||||||||||||||||||||||||    
T  15954702 agagacaaaaacagagtagtggaggtagtggttg 15954735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 14100592 - 14100557
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  14100592 agcagagacaa-aacagagtagtggaggtagtggttg 14100557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 15531777 - 15531741
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||||||  ||||||||||||||||||||||||    
T  15531777 agcagagacaaagacagagtagtggaggtagtggttg 15531741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 16265303 - 16265267
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||  |||||||||||||||||||||||||    
T  16265303 agcagagacacaaacagagtagtggaggtagtggttg 16265267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 16877209 - 16877245
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||| ||| |||||||||||||||||||||||||    
T  16877209 agcagaggcaaaaacagagtagtggaggtagtggttg 16877245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 19066171 - 19066135
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  19066171 agcagagacaaaaacagagtagtggaagtagtggttg 19066135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 19086325 - 19086369
Alignment:
Q  148 agctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    ||||||||||||  ||||| |||||||||||||||||| ||||||    
T  19086325 agctttaagtcttgcatctcctgatgaacttcagcttctggtgat 19086369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 20488071 - 20488035
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||| |||| |||||||||||||||||||||||||    
T  20488071 agcagatacaaaaacagagtagtggaggtagtggttg 20488035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 22076560 - 22076524
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  22076560 agcagagacaaaaacagagtagtggagatagtggttg 22076524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 22802137 - 22802173
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| || ||||||||||||||||||||||    
T  22802137 agcagagacaaaaatagagtagtggaggtagtggttg 22802173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 29918013 - 29918049
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||| |||||| |||||||||||||||||||||||||    
T  29918013 agcatagacaaaaacagagtagtggaggtagtggttg 29918049  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 32544261 - 32544297
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||  |||||||||||||||||||||||||    
T  32544261 agcagagacagaaacagagtagtggaggtagtggttg 32544297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 43911 - 43822
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttca 180  Q
    |||||| |||||||||||||||| ||||  |||||||||| |||||||| ||||||||| |||||||||||||||||||||||| |||||    
T  43911 cactcttctgatcttctgcaatgttaggcgtgattaaatcttttgaacagcctttgaagttttaagtctctcatcttctgatgatcttca 43822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 43804 - 43750
Alignment:
Q  181 gcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||| |||||| ||||||||||| ||||| || | |||||||||||||||||||    
T  43804 gcttctggtgatgttgcttctgattaggtgcttctgatgaacttgcttctgatga 43750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 1811 - 1895
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||| ||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||| |||||||||||||    
T  1811 gattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcttctgatga 1895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 1656 - 1692
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  1656 agcagagacaaaaacaaagtagtggaggtagtggttg 1692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 25935 - 25820
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||||||||||| |||||||||||  ||||| ||||||| ||| |||||| |||||| ||  |||||||||||| ||||||| |||    
T  25935 gattaaatccattgaacaacctttgacgctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgtttttcatg 25836  T
Q  220 aacttgcttctgatga 235  Q
    ||| ||||||||||||    
T  25835 aacgtgcttctgatga 25820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 10086 - 10176
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacc-tttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtga 191  Q
    |||||||||||| ||||  ||||||||||| ||||||| || ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  10086 tcttctgcaatgctaggcgtgattaaatccattgaacagccatttgaagctttaagtctcttatcttctgatgaacttcagcttctggtga 10176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 181
Target Start/End: Original strand, 40756 - 40846
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcag 181  Q
    |||||| ||| |||||||||||| ||||| |||||||||| |||||||| |||||||||||| || |||||||||||||||||| ||||||    
T  40756 cactcttctggtcttctgcaatgctaggtgtgattaaatcttttgaacagcctttgaagcttcaattctctcatcttctgatgatcttcag 40846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 14799 - 14912
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | || ||||  || |||||| |||||| |||||||||||||| ||||| | |||||    
T  14799 gattaaatccattgaacaacctttgaagctttaagtcttgcatttcctaatgatttttagcttctggtgatcttgcttctgatgagatgtttctaatgaa 14898  T
Q  222 cttgcttctgatga 235  Q
    || |||||||||||    
T  14899 ctagcttctgatga 14912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 4907 - 4792
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||||||||||||||  |||||| |||||| ||  |||| ||||||| || || | |||    
T  4907 gattaaatccattgaacagcctttgaagctttaagtcttgcatcttctgatgaactagagcttctggtgatcttcagcttatgatgagatgcttctgatg 4808  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  4807 aacttgcttctgatga 4792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 27389 - 27305
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||| | |||||||||||||||||||||||||||  ||||| ||||||||||||||| || |||||| |||||||||||||    
T  27389 gattaaattcattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcatctggtgatcttgcttctgatga 27305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 27544 - 27508
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  27544 agcagagacaaaaacagagtagtggaggtagtggttg 27508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 123 - 235
Target Start/End: Complemental strand, 19431 - 19319
Alignment:
Q  123 attaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaac 222  Q
    ||||||||| ||||||||| |||||||||||||||||  ||||| || ||||||| || |||| |||||| |||||||| ||||| || || | ||||||    
T  19431 attaaatccattgaacaacttttgaagctttaagtcttgcatctcctcatgaactacaacttctggtgatcttgcttcttatgagatgcttctgatgaac 19332  T
Q  223 ttgcttctgatga 235  Q
    |||||||||||||    
T  19331 ttgcttctgatga 19319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 99320 - 99284
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  99320 agcagagacaaaaacagagtagtggagatagtggttg 99284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 51; Significance: 3e-20; HSPs: 6)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 91 - 185
Target Start/End: Original strand, 159174 - 159268
Alignment:
Q  91 cactctcctgatcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttc 185  Q
    |||||| |||||||| ||||||| |||   ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||  ||||||||||    
T  159174 cactcttctgatcttttgcaatgttagacgtgattaaatcctttgaacatcctttgaagctctaagtctctcatcttttgatggtcttcagcttc 159268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 39576 - 39662
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| ||||||| ||||||||||||||| |||  ||||| ||||||||||  |||||| |||||| ||  |||||||||||    
T  39576 gattaaatccattgaacagcctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga 39662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 137636 - 137722
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| ||||||| ||||||||||||||| |||  ||||| ||||||||||  |||||| |||||| ||  |||||||||||    
T  137636 gattaaatccattgaacagcctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatga 137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 159288 - 159335
Alignment:
Q  188 gtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||| ||||||||||||||||| || | |||||||||||||||||||    
T  159288 gtgatgttgcttctgatgaggtgcttctgatgaacttgcttctgatga 159335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 37398 - 37434
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| || ||||||||||||||||||||||    
T  37398 agcagagacaaaaatagagtagtggaggtagtggttg 37434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 135458 - 135494
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| || ||||||||||||||||||||||    
T  135458 agcagagacaaaaatagagtagtggaggtagtggttg 135494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 746 - 633
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||| | |||||||  |||||||| |||||||||  ||||| ||||||||||| |||||| |||||| |||||||||||||| || || | |||||    
T  746 gattaaattcattgaacagtctttgaagttttaagtcttgcatctcctgatgaactttagcttctggtgatcttgcttctgatgagatgcttctgatgaa 647  T
Q  222 cttgcttctgatga 235  Q
    ||||||||| ||||    
T  646 cttgcttctaatga 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 1841 - 1954
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||| | || ||||  || ||||||  ||||| |||||||||||||| ||||| | |||||    
T  1841 gattaaatccattgaacaacctttgaagctttaagtcttgcatttcctaatgatttttagcttctagtgatcttgcttctgatgagatgtttctaatgaa 1940  T
Q  222 cttgcttctgatga 235  Q
    || |||||||||||    
T  1941 ctagcttctgatga 1954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 1502 - 1421
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagct 183  Q
    |||||||||||||| ||  |||||||||| ||||||||||||||||||||| || ||||||| |||||||||| ||||||||    
T  1502 tcttctgcaatgatgggcgtgattaaatcatttgaacaacctttgaagcttcaattctctcagcttctgatgatcttcagct 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 9338 - 9253
Alignment:
Q  150 ctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    ||||||||||  ||||| |||||||||||||||||| |||||| |||||||||||||| || || | |||||||| ||||||||||    
T  9338 ctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttgcttctgatgagatgcttctgatgaactttcttctgatga 9253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 9946 - 10059
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaa 221  Q
    |||||||||| || ||||| | |||||||||||| |||  ||||| | |||||||||||||||| |||||| |||||| ||||||| || || | || ||    
T  9946 gattaaatccattaaacaaaccttgaagctttaaatcttgcatctccagatgaacttcagcttctggtgatcttgcttatgatgagatgcttctgattaa 10045  T
Q  222 cttgcttctgatga 235  Q
    ||||||||||||||    
T  10046 cttgcttctgatga 10059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 36735 - 36620
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatgaggtgttttttatg 219  Q
    |||||||| | |||| || |||||||||||||||||||  |||||  |||||||||||||||||  ||||| |  ||||||||||||| || || | |||    
T  36735 gattaaattcattgagcagcctttgaagctttaagtcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttctaatg 36636  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  36635 aacttgcttctgatga 36620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 42270 - 42385
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatat--tgcttctgatgaggtgttttttatg 219  Q
    |||||||| | |||| || |||||||||||||||||||  |||||  |||||||||||||||||  ||||| |  ||||||||||||| || || | |||    
T  42270 gattaaattcattgagcagcctttgaagctttaagtcttgcatctcttgatgaacttcagcttctagtgatcttctgcttctgatgagatgcttctaatg 42369  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  42370 aacttgcttctgatga 42385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 36890 - 36854
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  36890 agcagagacaaaaacagagtagtagaggtagtggttg 36854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 42115 - 42151
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  42115 agcagagacaaaaacagagtagtagaggtagtggttg 42151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 22827 - 22913
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| |||||||||| |||| || |||||| ||  |||||||||||    
T  22827 gattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacagcctctggtgatcttcagcttctgatga 22913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 22672 - 22708
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  22672 agcagagacaaaaacagagtagtggaggtagtggttg 22708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 10068 - 9997
Alignment:
Q  122 gattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgat 192  Q
    |||||||||| ||||||||||||| ||||||||||||||  ||||| |||||||||||||||||| ||||||    
T  10068 gattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 9997  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 212525 - 212619
Alignment:
Q  141 cctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgaggtgttttttatgaacttgcttctgatga 235  Q
    |||||||||||||||||||   |||| |||||||| || |||||| | |||| |||||||||||||| || || | |||||||||||||||||||    
T  212525 cctttgaagctttaagtcttggatctcctgatgaagtttagcttctgatgatcttgcttctgatgagatgcttctgatgaacttgcttctgatga 212619  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 212350 - 212386
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    |||| |||||| |||||||||||||||||||||||||    
T  212350 agcatagacaaaaacagagtagtggaggtagtggttg 212386  T

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Target: scaffold0771 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Original strand, 626 - 741
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||  ||||||| ||||||| |||||||||||  ||||| ||||||| ||| |||||| |||||| ||  |||||||||||| || || | ||     
T  626 gattaaatcaattgaacatcctttgacgctttaagtcttgcatctcctgatgagctttagcttctggtgatcttcagcttctgatgagatgcttctgata 725  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  726 aacttgcttctgatga 741  T

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Target: scaffold0479 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 10120 - 10204
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||| ||||| ||||| | |||||||||||||||||||  ||||| ||||||||||||| ||||  ||||| |||||||||||||    
T  10120 gattgaatccattgaatagcctttgaagctttaagtcttgcatctcctgatgaacttcaacttcttgtgatcttgcttctgatga 10204  T

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Target: scaffold0479; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 9965 - 10001
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||||||||||||||||||||||||    
T  9965 agcagagacaaaaacagagtagtggaggtagtggttg 10001  T

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Target: scaffold0290 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 18581 - 18466
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||| ||||||| ||||||||||||||| |||    ||| |||||||||| ||||||| |||||| ||  |||| ||||||| || || | |||    
T  18581 gattaaatccattgaacagcctttgaagctttaaatcttgtgtctcctgatgaactgcagcttctggtgatcttcagcttatgatgagatgcttctgatg 18482  T
Q  220 aacttgcttctgatga 235  Q
    ||||||||||||||||    
T  18481 aacttgcttctgatga 18466  T

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Target: scaffold0146 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 15268 - 15352
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatga 206  Q
    |||||||||| |||| || |||||||||||||||||||  ||||| || ||| |||||| |||| |||||| |||||||||||||    
T  15268 gattaaatccattgatcagcctttgaagctttaagtcttgcatctccttatgcacttcatcttctggtgatcttgcttctgatga 15352  T

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Target: scaffold0116 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 235
Target Start/End: Complemental strand, 20931 - 20816
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgaggtgttttttatg 219  Q
    |||||||||  |||||||||||||||||||||||||||  |||||  |||||||||||| |||  |||||| ||  |||||| ||||| || || | |||    
T  20931 gattaaatcaattgaacaacctttgaagctttaagtcttgcatctcttgatgaacttcaacttttggtgatcttcagcttctaatgagatgcttctgatg 20832  T
Q  220 aacttgcttctgatga 235  Q
    |||||| |||||||||    
T  20831 aacttgtttctgatga 20816  T

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Target: scaffold0116; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 21086 - 21050
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  21086 agcagagacaaaaacagagtagtggagatagtggttg 21050  T

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Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 103724 - 103808
Alignment:
Q  123 attaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatattgcttctgatgag 207  Q
    ||||||| | || |||||||||| |||||||||||||  ||||| |||||||||||||||||| ||||   ||||||||||||||    
T  103724 attaaattcatttaacaacctttcaagctttaagtcttgcatctcctgatgaacttcagcttctggtgtccttgcttctgatgag 103808  T

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Target: scaffold0273 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 5756 - 5834
Alignment:
Q  102 tcttctgcaatgataggtatgattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttca 180  Q
    ||||||| ||||||||| ||||||||| | |||||||| |||||||||||| || ||| ||| |||||||||| |||||    
T  5756 tcttctggaatgataggcatgattaaaacatttgaacagcctttgaagcttcaattctttcagcttctgatgatcttca 5834  T

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Target: scaffold0084 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 49483 - 49570
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatgag 207  Q
    |||||||||| |||||||| ||||||||||||||| ||  ||||| |||||||||| || |||| |||||| ||  ||||||||||||    
T  49483 gattaaatccattgaacaaactttgaagctttaagacttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgag 49570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 32636 - 32691
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaact 177  Q
    |||||||||| |||||||  ||||||||||||||||||  ||||| ||||||||||    
T  32636 gattaaatccattgaacagtctttgaagctttaagtcttgcatctcctgatgaact 32691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 7854 - 7940
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||||| ||||||| |||||||||||||||||||  ||||| |||||||| |  |||||| |||||| ||  |||||||||||    
T  7854 gattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgatcttcagcttctgatga 7940  T

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Target: scaffold0243 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 159
Target Start/End: Complemental strand, 4953 - 4916
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtct 159  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4953 gattaaatccattgaacaacctttgaagctttaagtct 4916  T

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Target: scaffold0261 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 5896 - 5813
Alignment:
Q  126 aaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||| ||||||| ||||| ||||||||||||||  ||||| || ||||||||||||||| |||||| ||  |||||||||||    
T  5896 aaatccattgaacatccttttgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgatctttagcttctgatga 5813  T

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Target: scaffold1359 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 767 - 734
Alignment:
Q  54 agagacaagaacagagtagtggaggtagtggttg 87  Q
    |||||||| |||||||||||||||||||||||||    
T  767 agagacaaaaacagagtagtggaggtagtggttg 734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 6002 - 6038
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  6002 agcagagacaaaaacagagtagtggagatagtggttg 6038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 2806 - 2770
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  2806 agcagagacaaaaacagagtagtggagttagtggttg 2770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 3300 - 3336
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  3300 agcagagacaaaaacagagcagtggaggtagtggttg 3336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 2845 - 2809
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  2845 agcagagacaaaaacagagtagtggagatagtggttg 2809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 17880 - 17844
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  17880 agcagagacaaaaacagagtagtggagatagtggttg 17844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 15854 - 15818
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  15854 agcagagacaaaaacagagtagtggagatagtggttg 15818  T

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Target: scaffold0247; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 25514 - 25478
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  25514 agcagagacaaaaacagagtagtggagatagtggttg 25478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 19027 - 19063
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||| |||||||||||||||||||||    
T  19027 agcagagacaaaaactgagtagtggaggtagtggttg 19063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 15945 - 16009
Alignment:
Q  122 gattaaatcctttgaacaaccttt-gaagctttaagtctctcatcttctgatgaacttcagcttc 185  Q
    |||| ||||| |||||||| |||| ||||||||||||||  ||||| ||||||||||| ||||||    
T  15945 gattgaatccattgaacaatcttttgaagctttaagtcttgcatctcctgatgaactttagcttc 16009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 5717 - 5681
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  5717 agcagagacaaaaacatagtagtggaggtagtggttg 5681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 215612 - 215576
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||| | |||||||||||||||||||||||||    
T  215612 agcagagacgaaaacagagtagtggaggtagtggttg 215576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 90015 - 89931
Alignment:
Q  122 gattaaatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagcttcgggtgatatt--gcttctgatga 206  Q
    |||||||| | |||| |||||||||||||||||||  |  ||||| |||||||||| ||||||| |||||| ||  |||||||||||    
T  90015 gattaaatacattgatcaacctttgaagctttaag--ttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 89931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 90170 - 90134
Alignment:
Q  51 agcagagacaagaacagagtagtggaggtagtggttg 87  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  90170 agcagagacaaaaacagagtagtggaggtaggggttg 90134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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