View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0091-INSERTION-13 (Length: 329)
Name: NF0091-INSERTION-13
Description: NF0091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0091-INSERTION-13 |
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Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 8 - 311
Target Start/End: Complemental strand, 26301471 - 26301168
Alignment:
| Q |
8 |
atttatacccgttgactttcctattttgatgccatctgtgttggggctatcatcgggggcttttatttgtagttttgtgagtgtcacgttgttacatcta |
107 |
Q |
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| T |
26301471 |
atttatacccgttgactttcctattttgatgccatctgtgttggggctgtcaccgggggcttttatttgtagttttgtgagtgtcatgttgttacatcta |
26301372 |
T |
|
| Q |
108 |
tacaacccaaaatgactttgcttgctgttgaaagaatgcatatgatgtatatactcattggtaatgtaatcaaatttcatcgactgtcttctccgaaaaa |
207 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
26301371 |
tacaacccaaaatgactttgcttgctgttgaaagaatgcatatgatgtatatacccattggtaatgtaatcaaatttcatcgactgtcatctccgaaaaa |
26301272 |
T |
|
| Q |
208 |
atataaaacgttaattaaacgtgatattaatgaaacacactttcattaagagacatgcactcacaactttagctatatctatatttcagtccaaccccta |
307 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
26301271 |
atataaaacgttaattaaacgtgatattaatgaaacacactttcattaagagacatgcactcacaactttagctatatctatatttcggtccaaccccta |
26301172 |
T |
|
| Q |
308 |
tttt |
311 |
Q |
| |
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|||| |
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| T |
26301171 |
tttt |
26301168 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 195
Target Start/End: Complemental strand, 11532352 - 11532165
Alignment:
| Q |
8 |
atttatacccgttgactttcctattttgatgccatctgtgttggggctatcatcgggggcttttatttgtagttttgtgagtgtcacgttgttacatcta |
107 |
Q |
| |
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|||||| ||| ||||| | |||||||| || |||||||||||||||||||| | ||||||| |||||| ||| | | ||| || ||| | ||||| | |
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| T |
11532352 |
atttattccctttgacatccctattttaataccatctgtgttggggctatctttgggggctgttattttcagtcctctaagtaacatgttttcacatcca |
11532253 |
T |
|
| Q |
108 |
tacaacccaaaatgactttgcttgctgttgaaagaatgcatatgatgtatatactcattggtaatgtaatcaaatttcatcgactgtc |
195 |
Q |
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| ||| ||||||||||||| ||||| | || ||||||||| | ||| | ||| ||||||| ||| | ||||||||||||| ||||| |
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| T |
11532252 |
aataacacaaaatgactttgtttgctatcgatagaatgcatgtcatggacataaccattggtgatgaagtcaaatttcatcgtctgtc |
11532165 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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