View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0091-INSERTION-9 (Length: 657)

Name: NF0091-INSERTION-9
Description: NF0091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0091-INSERTION-9
NF0091-INSERTION-9
[»] chr4 (101 HSPs)
chr4 (147-447)||(55799399-55799700)
chr4 (148-447)||(41793265-41793567)
chr4 (152-447)||(6175785-6176080)
chr4 (146-447)||(49096188-49096492)
chr4 (512-633)||(6176145-6176265)
chr4 (512-633)||(41793632-41793752)
chr4 (512-633)||(49096003-49096123)
chr4 (513-633)||(21016008-21016127)
chr4 (314-447)||(40352406-40352539)
chr4 (513-632)||(40352605-40352723)
chr4 (512-615)||(55799231-55799334)
chr4 (299-447)||(21015790-21015942)
chr4 (148-261)||(49169123-49169236)
chr4 (148-261)||(54633746-54633859)
chr4 (143-261)||(30723050-30723168)
chr4 (147-261)||(31425344-31425458)
chr4 (322-447)||(28083860-28083985)
chr4 (146-261)||(37562997-37563112)
chr4 (512-586)||(28083721-28083795)
chr4 (512-594)||(37867991-37868073)
chr4 (163-261)||(49563789-49563887)
chr4 (146-261)||(1087792-1087907)
chr4 (249-447)||(39590437-39590639)
chr4 (152-261)||(40358306-40358415)
chr4 (148-261)||(1089610-1089723)
chr4 (324-447)||(56140560-56140684)
chr4 (512-587)||(39590298-39590373)
chr4 (148-263)||(41800961-41801076)
chr4 (314-443)||(34528234-34528364)
chr4 (542-594)||(956076-956128)
chr4 (542-594)||(44558940-44558992)
chr4 (532-595)||(6281159-6281222)
chr4 (314-443)||(1044418-1044548)
chr4 (324-447)||(44558728-44558852)
chr4 (245-313)||(54634023-54634091)
chr4 (512-586)||(9491008-9491083)
chr4 (146-261)||(31242148-31242263)
chr4 (324-447)||(51426616-51426742)
chr4 (322-447)||(37868138-37868264)
chr4 (148-198)||(39773630-39773680)
chr4 (148-218)||(49090381-49090451)
chr4 (324-377)||(43887579-43887632)
chr4 (542-594)||(34151899-34151951)
chr4 (245-313)||(37563288-37563356)
chr4 (245-313)||(39773401-39773469)
chr4 (146-218)||(51037536-51037608)
chr4 (245-313)||(52529210-52529278)
chr4 (147-218)||(6181860-6181931)
chr4 (147-218)||(21022956-21023027)
chr4 (146-261)||(26792270-26792385)
chr4 (527-586)||(56140423-56140482)
chr4 (324-377)||(9491224-9491278)
chr4 (324-377)||(21410211-21410265)
chr4 (532-586)||(37959453-37959507)
chr4 (532-586)||(49572631-49572685)
chr4 (147-261)||(52529146-52529260)
chr4 (148-261)||(26932518-26932631)
chr4 (512-586)||(34528435-34528501)
chr4 (146-218)||(14201595-14201667)
chr4 (245-313)||(30726749-30726817)
chr4 (542-586)||(33384090-33384134)
chr4 (324-376)||(51026134-51026186)
chr4 (542-586)||(51426823-51426867)
chr4 (258-313)||(1089592-1089647)
chr4 (146-261)||(54634041-54634156)
chr4 (532-586)||(1044264-1044318)
chr4 (324-377)||(4909901-4909955)
chr4 (148-218)||(13173168-13173238)
chr4 (148-218)||(13182167-13182237)
chr4 (251-313)||(26792252-26792314)
chr4 (327-377)||(36774793-36774843)
chr4 (144-218)||(40832577-40832651)
chr4 (532-586)||(49422380-49422434)
chr4 (148-261)||(30726767-30726880)
chr4 (147-243)||(9893308-9893404)
chr4 (324-372)||(14968550-14968598)
chr4 (245-313)||(26932581-26932649)
chr4 (148-236)||(31421640-31421728)
chr4 (343-447)||(33383904-33384008)
chr4 (324-447)||(49572771-49572894)
chr4 (324-372)||(49815852-49815900)
chr4 (337-372)||(2567409-2567444)
chr4 (258-313)||(31425326-31425381)
chr4 (258-313)||(37563075-37563130)
chr4 (258-313)||(40358288-40358343)
chr4 (258-313)||(41800945-41801000)
chr4 (258-313)||(49169105-49169160)
chr4 (258-313)||(49563850-49563905)
chr4 (148-218)||(7485729-7485799)
chr4 (249-287)||(31242217-31242255)
chr4 (249-287)||(49566483-49566521)
chr4 (148-218)||(55588352-55588422)
chr4 (542-579)||(241796-241833)
chr4 (149-218)||(1309183-1309252)
chr4 (146-175)||(15995654-15995683)
chr4 (249-313)||(16983524-16983587)
chr4 (249-313)||(16984169-16984232)
chr4 (249-313)||(21022896-21022959)
chr4 (324-371)||(24076807-24076855)
chr4 (347-447)||(34151717-34151817)
chr4 (344-372)||(45941350-45941378)
[»] chr5 (73 HSPs)
chr5 (146-447)||(19035137-19035441)
chr5 (245-447)||(27659937-27660143)
chr5 (512-632)||(27660208-27660327)
chr5 (512-633)||(19035506-19035626)
chr5 (249-447)||(30711030-30711231)
chr5 (524-632)||(30710860-30710967)
chr5 (314-447)||(8574791-8574924)
chr5 (314-447)||(11348371-11348504)
chr5 (249-447)||(38855581-38855783)
chr5 (314-447)||(5866-5999)
chr5 (146-261)||(14280926-14281041)
chr5 (513-594)||(6065-6146)
chr5 (148-261)||(28238073-28238186)
chr5 (512-594)||(8539266-8539348)
chr5 (512-594)||(30887157-30887239)
chr5 (512-632)||(8574989-8575099)
chr5 (146-263)||(19041141-19041258)
chr5 (512-594)||(11348224-11348306)
chr5 (151-261)||(28876580-28876690)
chr5 (147-261)||(37814515-37814629)
chr5 (314-447)||(8539413-8539545)
chr5 (249-447)||(11028874-11029076)
chr5 (512-586)||(541193-541267)
chr5 (148-261)||(8580505-8580618)
chr5 (314-447)||(540996-541127)
chr5 (272-447)||(41798842-41799022)
chr5 (313-429)||(30887265-30887382)
chr5 (542-594)||(18309794-18309846)
chr5 (542-594)||(25499612-25499664)
chr5 (324-447)||(25499757-25499881)
chr5 (527-594)||(41202002-41202069)
chr5 (540-630)||(11028709-11028789)
chr5 (148-218)||(11033531-11033601)
chr5 (147-261)||(27659873-27659987)
chr5 (324-377)||(36348710-36348763)
chr5 (147-218)||(38860237-38860308)
chr5 (148-218)||(11027029-11027099)
chr5 (540-630)||(38855416-38855496)
chr5 (532-586)||(41799117-41799171)
chr5 (324-377)||(1973198-1973251)
chr5 (326-377)||(3603088-3603140)
chr5 (253-313)||(13837729-13837789)
chr5 (542-586)||(34682541-34682585)
chr5 (146-261)||(13837656-13837771)
chr5 (258-313)||(28238149-28238204)
chr5 (543-594)||(35566797-35566848)
chr5 (323-377)||(1696564-1696618)
chr5 (532-586)||(3602880-3602934)
chr5 (324-377)||(7401808-7401862)
chr5 (532-586)||(20199878-20199932)
chr5 (324-377)||(35566967-35567021)
chr5 (332-377)||(7483846-7483891)
chr5 (148-261)||(30711185-30711298)
chr5 (343-416)||(34682356-34682429)
chr5 (326-369)||(1398685-1398729)
chr5 (142-218)||(3892505-3892581)
chr5 (258-313)||(14280908-14280963)
chr5 (325-371)||(18309993-18310040)
chr5 (147-218)||(28241868-28241939)
chr5 (520-559)||(28881941-28881980)
chr5 (148-247)||(38853413-38853512)
chr5 (245-287)||(8574679-8574721)
chr5 (315-353)||(8574727-8574765)
chr5 (249-287)||(30705138-30705176)
chr5 (514-586)||(1398903-1398975)
chr5 (142-175)||(13563596-13563629)
chr5 (153-261)||(14279788-14279897)
chr5 (344-377)||(20200089-20200122)
chr5 (324-372)||(31239717-31239766)
chr5 (332-377)||(41088222-41088267)
chr5 (249-313)||(7757327-7757390)
chr5 (249-313)||(11346009-11346072)
chr5 (324-371)||(23190788-23190836)
[»] scaffold0014 (2 HSPs)
scaffold0014 (146-447)||(84479-84783)
scaffold0014 (512-553)||(84848-84889)
[»] chr3 (123 HSPs)
chr3 (147-447)||(46406461-46406764)
chr3 (147-447)||(49138514-49138817)
chr3 (147-447)||(2950266-2950569)
chr3 (148-447)||(34051183-34051485)
chr3 (249-447)||(2645457-2645659)
chr3 (258-447)||(54391898-54392091)
chr3 (512-632)||(3493854-3493973)
chr3 (512-632)||(3497548-3497667)
chr3 (512-633)||(46406276-46406396)
chr3 (512-633)||(49138882-49139002)
chr3 (513-633)||(34050998-34051117)
chr3 (249-447)||(3493590-3493788)
chr3 (249-447)||(3497284-3497482)
chr3 (512-633)||(54391713-54391833)
chr3 (147-313)||(42900110-42900276)
chr3 (298-447)||(2267106-2267259)
chr3 (147-261)||(3953241-3953355)
chr3 (314-447)||(4002784-4002916)
chr3 (137-261)||(46697634-46697758)
chr3 (298-447)||(50998524-50998677)
chr3 (152-259)||(6745354-6745461)
chr3 (146-261)||(9426563-9426678)
chr3 (512-594)||(2267314-2267396)
chr3 (147-261)||(8156441-8156555)
chr3 (512-594)||(36136321-36136403)
chr3 (512-593)||(52568033-52568114)
chr3 (148-258)||(41844083-41844193)
chr3 (249-447)||(43478699-43478901)
chr3 (512-586)||(50998385-50998459)
chr3 (152-261)||(54392054-54392163)
chr3 (512-592)||(4002982-4003062)
chr3 (147-261)||(35743608-35743720)
chr3 (148-261)||(3501921-3502034)
chr3 (152-261)||(30943127-30943236)
chr3 (147-263)||(2967949-2968065)
chr3 (514-594)||(13894502-13894582)
chr3 (148-263)||(49144480-49144595)
chr3 (146-261)||(50477112-50477227)
chr3 (512-586)||(24700989-24701063)
chr3 (512-586)||(51694148-51694222)
chr3 (148-261)||(2857982-2858095)
chr3 (527-594)||(2645725-2645792)
chr3 (267-447)||(49217114-49217294)
chr3 (148-261)||(1835353-1835463)
chr3 (272-447)||(34691649-34691829)
chr3 (512-586)||(34691897-34691971)
chr3 (334-447)||(36136468-36136580)
chr3 (148-227)||(25191855-25191934)
chr3 (265-445)||(16484327-16484512)
chr3 (343-447)||(55205367-55205471)
chr3 (343-447)||(55267515-55267619)
chr3 (512-594)||(2430001-2430083)
chr3 (542-593)||(44223306-44223357)
chr3 (314-447)||(24700791-24700925)
chr3 (532-593)||(55205571-55205632)
chr3 (512-586)||(43478553-43478629)
chr3 (542-594)||(43571418-43571470)
chr3 (543-594)||(7247594-7247645)
chr3 (532-595)||(55267716-55267779)
chr3 (324-377)||(20374301-20374355)
chr3 (148-218)||(34045342-34045412)
chr3 (148-218)||(46388892-46388962)
chr3 (144-218)||(46702094-46702168)
chr3 (324-377)||(42321808-42321861)
chr3 (324-377)||(50457576-50457629)
chr3 (146-218)||(16444540-16444612)
chr3 (245-313)||(41844372-41844440)
chr3 (343-447)||(52567858-52567962)
chr3 (323-377)||(19440335-19440390)
chr3 (527-586)||(49611679-49611738)
chr3 (322-434)||(13894304-13894417)
chr3 (147-232)||(29008819-29008904)
chr3 (325-377)||(41579664-41579717)
chr3 (532-585)||(41805396-41805449)
chr3 (323-447)||(41805544-41805669)
chr3 (157-261)||(2645399-2645503)
chr3 (148-236)||(42904233-42904321)
chr3 (258-313)||(1835335-1835390)
chr3 (258-313)||(3501903-3501958)
chr3 (258-313)||(6745334-6745389)
chr3 (245-287)||(1835147-1835189)
chr3 (148-258)||(3493523-3493633)
chr3 (148-258)||(3497217-3497327)
chr3 (148-218)||(19988394-19988464)
chr3 (148-218)||(34543204-34543274)
chr3 (532-586)||(41579455-41579509)
chr3 (532-586)||(46345223-46345277)
chr3 (326-447)||(51693960-51694082)
chr3 (148-261)||(1835084-1835197)
chr3 (325-377)||(2432883-2432936)
chr3 (533-586)||(45099086-45099139)
chr3 (325-377)||(46345017-46345070)
chr3 (323-372)||(46412614-46412663)
chr3 (324-377)||(51017123-51017176)
chr3 (249-313)||(8475828-8475891)
chr3 (324-372)||(30194376-30194424)
chr3 (324-447)||(34645641-34645764)
chr3 (146-218)||(50998748-50998820)
chr3 (249-313)||(55385139-55385202)
chr3 (258-313)||(2967933-2967988)
chr3 (258-313)||(41844159-41844214)
chr3 (343-447)||(43571553-43571659)
chr3 (547-586)||(44490630-44490669)
chr3 (344-447)||(45098905-45099008)
chr3 (258-313)||(46697721-46697776)
chr3 (524-578)||(49217360-49217415)
chr3 (258-313)||(50477190-50477245)
chr3 (249-287)||(3948730-3948768)
chr3 (148-218)||(12898755-12898825)
chr3 (249-287)||(30947687-30947725)
chr3 (245-287)||(35743416-35743458)
chr3 (148-218)||(50481452-50481522)
chr3 (325-377)||(7247800-7247853)
chr3 (146-227)||(11095143-11095224)
chr3 (332-377)||(11377334-11377379)
chr3 (349-398)||(27096093-27096142)
chr3 (332-369)||(44929310-44929347)
chr3 (148-205)||(54386067-54386124)
chr3 (249-313)||(2647707-2647771)
chr3 (245-309)||(4004815-4004878)
chr3 (324-372)||(14633306-14633354)
chr3 (146-218)||(28817069-28817141)
chr3 (249-313)||(43476193-43476257)
[»] chr6 (50 HSPs)
chr6 (148-447)||(27641588-27641890)
chr6 (147-447)||(11693897-11694200)
chr6 (148-447)||(6206930-6207232)
chr6 (148-447)||(32691085-32691388)
chr6 (512-633)||(6206745-6206865)
chr6 (512-633)||(11693712-11693832)
chr6 (152-261)||(1608256-1608365)
chr6 (148-261)||(18351669-18351782)
chr6 (147-263)||(27616648-27616764)
chr6 (524-599)||(32691451-32691526)
chr6 (524-594)||(13616509-13616579)
chr6 (147-261)||(30825983-30826097)
chr6 (326-446)||(14124589-14124710)
chr6 (512-576)||(27641459-27641523)
chr6 (150-261)||(26712249-26712360)
chr6 (323-447)||(13616319-13616444)
chr6 (148-261)||(17597550-17597663)
chr6 (249-377)||(29076263-29076394)
chr6 (249-377)||(29109796-29109927)
chr6 (249-377)||(29111236-29111367)
chr6 (289-447)||(35019617-35019780)
chr6 (343-434)||(34801603-34801694)
chr6 (532-595)||(35019874-35019937)
chr6 (314-447)||(29068135-29068269)
chr6 (314-447)||(29083382-29083516)
chr6 (245-313)||(13382626-13382694)
chr6 (245-313)||(26712045-26712113)
chr6 (542-586)||(32026247-32026291)
chr6 (148-261)||(13382563-13382676)
chr6 (326-377)||(17126912-17126964)
chr6 (249-313)||(28249886-28249950)
chr6 (148-218)||(11688048-11688118)
chr6 (259-313)||(26712231-26712285)
chr6 (146-227)||(13164316-13164397)
chr6 (524-584)||(29068008-29068069)
chr6 (524-584)||(29083254-29083315)
chr6 (524-584)||(29109597-29109658)
chr6 (589-633)||(27641436-27641479)
chr6 (542-586)||(34801799-34801843)
chr6 (543-586)||(13404351-13404394)
chr6 (325-447)||(13404502-13404625)
chr6 (527-586)||(29076058-29076117)
chr6 (527-586)||(29111030-29111089)
chr6 (324-371)||(5972079-5972128)
chr6 (148-194)||(6760964-6761010)
chr6 (324-371)||(8712006-8712055)
chr6 (245-313)||(17597532-17597600)
chr6 (249-313)||(22305109-22305173)
chr6 (152-232)||(30829706-30829786)
chr6 (344-372)||(32132968-32132996)
[»] chr2 (93 HSPs)
chr2 (152-447)||(3935768-3936066)
chr2 (148-447)||(17426235-17426537)
chr2 (152-447)||(43984171-43984469)
chr2 (245-447)||(22003271-22003477)
chr2 (148-313)||(15835185-15835350)
chr2 (146-346)||(42499685-42499888)
chr2 (512-633)||(3936131-3936251)
chr2 (512-633)||(17426050-17426170)
chr2 (512-632)||(22003087-22003206)
chr2 (512-633)||(43983986-43984106)
chr2 (249-447)||(28476937-28477138)
chr2 (524-632)||(28476767-28476874)
chr2 (147-261)||(208943-209057)
chr2 (152-261)||(5351758-5351867)
chr2 (298-412)||(45435111-45435229)
chr2 (148-261)||(30493293-30493406)
chr2 (157-261)||(10619942-10620046)
chr2 (512-594)||(16583318-16583400)
chr2 (147-261)||(18000165-18000279)
chr2 (147-261)||(41564518-41564632)
chr2 (148-261)||(5355557-5355670)
chr2 (147-261)||(17420501-17420615)
chr2 (147-261)||(44100824-44100938)
chr2 (249-447)||(39798444-39798646)
chr2 (249-447)||(3943060-3943263)
chr2 (148-259)||(7267472-7267583)
chr2 (148-261)||(43536036-43536149)
chr2 (512-594)||(35493065-35493148)
chr2 (152-261)||(38950553-38950661)
chr2 (512-594)||(43492997-43493080)
chr2 (323-447)||(41497551-41497676)
chr2 (542-594)||(8268486-8268538)
chr2 (148-261)||(21998148-21998261)
chr2 (343-447)||(8268619-8268723)
chr2 (343-434)||(23409385-23409475)
chr2 (146-261)||(43619168-43619283)
chr2 (146-218)||(39793895-39793967)
chr2 (542-594)||(40676029-40676081)
chr2 (527-586)||(3942913-3942972)
chr2 (322-447)||(16583464-16583590)
chr2 (151-261)||(22003427-22003537)
chr2 (148-218)||(30497018-30497088)
chr2 (322-447)||(34639183-34639309)
chr2 (580-630)||(39798763-39798812)
chr2 (148-218)||(39800721-39800791)
chr2 (148-218)||(42505831-42505901)
chr2 (152-218)||(43978474-43978540)
chr2 (147-236)||(20937831-20937920)
chr2 (512-586)||(23786394-23786460)
chr2 (324-444)||(43493157-43493278)
chr2 (144-232)||(15831057-15831145)
chr2 (542-586)||(23409247-23409291)
chr2 (147-215)||(39033032-39033100)
chr2 (148-267)||(3085971-3086089)
chr2 (324-371)||(6978666-6978713)
chr2 (151-218)||(30803086-30803153)
chr2 (258-313)||(44100806-44100861)
chr2 (544-594)||(2917981-2918031)
chr2 (152-218)||(3940798-3940864)
chr2 (148-218)||(10424774-10424844)
chr2 (316-377)||(29090647-29090709)
chr2 (245-287)||(44100699-44100741)
chr2 (324-377)||(10358877-10358930)
chr2 (324-377)||(23719426-23719479)
chr2 (324-377)||(24107098-24107151)
chr2 (248-313)||(28468641-28468706)
chr2 (332-377)||(34520054-34520099)
chr2 (324-377)||(37311043-37311096)
chr2 (532-585)||(41497760-41497813)
chr2 (542-586)||(19470245-19470289)
chr2 (249-313)||(23346782-23346845)
chr2 (324-447)||(35493211-35493335)
chr2 (258-313)||(7267452-7267507)
chr2 (258-313)||(17420578-17420633)
chr2 (258-313)||(18000242-18000297)
chr2 (322-447)||(23786202-23786329)
chr2 (147-218)||(39951218-39951289)
chr2 (258-313)||(41564500-41564555)
chr2 (249-287)||(213486-213524)
chr2 (249-287)||(10624499-10624537)
chr2 (249-287)||(18003306-18003344)
chr2 (245-287)||(21998211-21998253)
chr2 (148-218)||(29074071-29074141)
chr2 (249-287)||(43619176-43619214)
chr2 (245-287)||(45428613-45428655)
chr2 (343-372)||(33405659-33405688)
chr2 (148-217)||(36509903-36509972)
chr2 (148-261)||(43312666-43312779)
chr2 (249-313)||(7189959-7190022)
chr2 (324-427)||(19470037-19470140)
chr2 (146-218)||(20951114-20951186)
chr2 (146-198)||(28468573-28468625)
chr2 (249-313)||(43870129-43870192)
[»] chr7 (91 HSPs)
chr7 (152-447)||(9365584-9365882)
chr7 (148-447)||(20566203-20566498)
chr7 (147-361)||(10098266-10098483)
chr7 (138-313)||(16636216-16636391)
chr7 (138-313)||(17459247-17459422)
chr7 (138-313)||(17593792-17593967)
chr7 (148-313)||(48407295-48407460)
chr7 (512-633)||(9365947-9366067)
chr7 (512-632)||(42504085-42504204)
chr7 (513-633)||(20566018-20566137)
chr7 (249-447)||(15070356-15070558)
chr7 (148-261)||(603713-603826)
chr7 (249-447)||(17840760-17840961)
chr7 (152-261)||(43619643-43619752)
chr7 (314-445)||(34139600-34139731)
chr7 (512-594)||(17840613-17840695)
chr7 (148-261)||(10097850-10097963)
chr7 (314-447)||(45257900-45258033)
chr7 (148-261)||(41884152-41884265)
chr7 (322-447)||(10524201-10524326)
chr7 (148-261)||(35606723-35606836)
chr7 (314-447)||(42503887-42504020)
chr7 (152-261)||(45767887-45767995)
chr7 (512-594)||(45361895-45361977)
chr7 (512-594)||(40590270-40590352)
chr7 (512-594)||(10524050-10524136)
chr7 (152-261)||(30791034-30791143)
chr7 (513-586)||(28977827-28977900)
chr7 (148-263)||(20564007-20564122)
chr7 (7-62)||(31761771-31761826)
chr7 (314-447)||(34142528-34142662)
chr7 (532-594)||(36392408-36392470)
chr7 (322-447)||(45361701-45361827)
chr7 (148-233)||(7004-7089)
chr7 (315-447)||(48194501-48194634)
chr7 (343-447)||(15309845-15309949)
chr7 (542-594)||(21185911-21185963)
chr7 (542-594)||(42683939-42683991)
chr7 (323-443)||(46596964-46597084)
chr7 (245-313)||(18105370-18105438)
chr7 (147-218)||(8115-8186)
chr7 (343-401)||(10225759-10225817)
chr7 (322-447)||(40590419-40590545)
chr7 (542-592)||(41623617-41623667)
chr7 (148-261)||(18105307-18105420)
chr7 (542-594)||(10225599-10225651)
chr7 (245-313)||(15074236-15074304)
chr7 (512-594)||(46860769-46860859)
chr7 (147-261)||(40141252-40141366)
chr7 (148-218)||(42582050-42582120)
chr7 (324-377)||(46860590-46860644)
chr7 (148-261)||(15074254-15074367)
chr7 (324-377)||(42736809-42736862)
chr7 (258-314)||(10097926-10097982)
chr7 (245-313)||(10098125-10098193)
chr7 (324-447)||(28112862-28112986)
chr7 (146-258)||(42508056-42508168)
chr7 (148-218)||(12210658-12210728)
chr7 (245-287)||(42508061-42508103)
chr7 (245-287)||(43032971-43033013)
chr7 (253-310)||(7975620-7975677)
chr7 (148-261)||(7975635-7975748)
chr7 (324-377)||(20876395-20876448)
chr7 (512-586)||(34142393-34142459)
chr7 (145-218)||(35610484-35610557)
chr7 (147-232)||(41880447-41880532)
chr7 (512-586)||(48194365-48194431)
chr7 (152-261)||(48403310-48403419)
chr7 (324-372)||(15899691-15899739)
chr7 (146-218)||(27656971-27657043)
chr7 (322-447)||(28977640-28977761)
chr7 (337-372)||(2204171-2204206)
chr7 (146-261)||(10098143-10098258)
chr7 (258-313)||(20564083-20564138)
chr7 (258-313)||(41884134-41884189)
chr7 (147-218)||(42795148-42795219)
chr7 (258-313)||(45767869-45767924)
chr7 (148-218)||(10524425-10524495)
chr7 (249-287)||(30786548-30786586)
chr7 (255-313)||(30791016-30791074)
chr7 (324-377)||(42684137-42684191)
chr7 (343-377)||(43349739-43349773)
chr7 (148-218)||(46907474-46907544)
chr7 (148-218)||(49141686-49141756)
chr7 (258-311)||(603789-603842)
chr7 (332-369)||(17185017-17185054)
chr7 (325-377)||(48314753-48314806)
chr7 (349-377)||(1640991-1641019)
chr7 (146-218)||(17465782-17465854)
chr7 (146-218)||(17587360-17587432)
chr7 (249-313)||(17834489-17834552)
[»] chr8 (72 HSPs)
chr8 (152-447)||(483721-484019)
chr8 (147-407)||(22519472-22519735)
chr8 (245-447)||(15030881-15031087)
chr8 (245-447)||(45066231-45066437)
chr8 (512-633)||(484084-484204)
chr8 (147-313)||(42481459-42481626)
chr8 (512-632)||(15031151-15031270)
chr8 (512-632)||(45066047-45066166)
chr8 (249-443)||(41016416-41016613)
chr8 (146-261)||(7344583-7344698)
chr8 (146-261)||(22014178-22014293)
chr8 (249-447)||(22550734-22550936)
chr8 (512-594)||(26455397-26455479)
chr8 (512-594)||(41016682-41016764)
chr8 (152-261)||(8419342-8419451)
chr8 (152-261)||(17924309-17924418)
chr8 (512-594)||(41276607-41276689)
chr8 (152-261)||(32375589-32375698)
chr8 (147-260)||(36677645-36677758)
chr8 (153-240)||(17924040-17924127)
chr8 (148-259)||(23018619-23018730)
chr8 (148-261)||(21720-21833)
chr8 (148-261)||(26663059-26663172)
chr8 (512-586)||(22550595-22550669)
chr8 (148-261)||(1056227-1056340)
chr8 (148-259)||(2878518-2878629)
chr8 (146-233)||(2335201-2335288)
chr8 (272-447)||(44052095-44052275)
chr8 (326-447)||(41276755-41276877)
chr8 (245-313)||(184560-184628)
chr8 (245-313)||(36677937-36678005)
chr8 (148-215)||(184309-184376)
chr8 (344-447)||(40704029-40704132)
chr8 (528-586)||(24862877-24862935)
chr8 (148-218)||(42485607-42485677)
chr8 (152-217)||(30301160-30301224)
chr8 (276-447)||(41855396-41855567)
chr8 (146-218)||(489695-489767)
chr8 (324-447)||(28168472-28168596)
chr8 (323-434)||(42605117-42605229)
chr8 (527-586)||(28168323-28168382)
chr8 (512-586)||(38872671-38872745)
chr8 (532-586)||(18438927-18438981)
chr8 (322-447)||(26455545-26455671)
chr8 (148-261)||(15030818-15030931)
chr8 (148-261)||(45066387-45066500)
chr8 (514-585)||(42604958-42605030)
chr8 (146-261)||(184578-184693)
chr8 (258-313)||(22014256-22014311)
chr8 (146-261)||(36677955-36678070)
chr8 (154-261)||(43211472-43211579)
chr8 (148-218)||(25603-25673)
chr8 (148-218)||(2416137-2416207)
chr8 (245-287)||(22014469-22014511)
chr8 (152-218)||(22510486-22510552)
chr8 (151-236)||(26659391-26659476)
chr8 (146-218)||(32585058-32585130)
chr8 (527-579)||(44051966-44052018)
chr8 (258-313)||(8419414-8419469)
chr8 (258-313)||(17924291-17924346)
chr8 (342-377)||(26488406-26488441)
chr8 (258-313)||(26663041-26663096)
chr8 (258-313)||(32375661-32375716)
chr8 (249-287)||(30305577-30305615)
chr8 (148-261)||(1052492-1052605)
chr8 (148-233)||(27501535-27501620)
chr8 (324-369)||(38032291-38032336)
chr8 (209-261)||(8423815-8423867)
chr8 (146-218)||(23022356-23022428)
chr8 (146-218)||(31185513-31185585)
chr8 (325-377)||(38872871-38872923)
chr8 (249-313)||(39601706-39601769)
[»] chr1 (85 HSPs)
chr1 (147-313)||(19928819-19928985)
chr1 (512-632)||(19162161-19162280)
chr1 (249-447)||(19161894-19162095)
chr1 (308-447)||(49429031-49429170)
chr1 (147-261)||(8548695-8548809)
chr1 (152-261)||(38771567-38771676)
chr1 (146-261)||(3943906-3944021)
chr1 (512-594)||(27485303-27485385)
chr1 (152-261)||(20353961-20354070)
chr1 (252-447)||(13633873-13634069)
chr1 (147-261)||(3993869-3993983)
chr1 (540-632)||(13634154-13634245)
chr1 (512-586)||(48228046-48228120)
chr1 (316-434)||(48228194-48228312)
chr1 (249-447)||(51271460-51271662)
chr1 (148-261)||(3728669-3728782)
chr1 (152-240)||(20556836-20556924)
chr1 (512-586)||(44336518-44336592)
chr1 (267-447)||(44336268-44336453)
chr1 (147-261)||(15051374-15051488)
chr1 (146-261)||(26879321-26879436)
chr1 (162-261)||(29622450-29622549)
chr1 (323-447)||(49924935-49925060)
chr1 (527-594)||(6437252-6437319)
chr1 (265-447)||(44598775-44598962)
chr1 (532-594)||(26633816-26633878)
chr1 (322-447)||(27485111-27485237)
chr1 (532-594)||(46142052-46142114)
chr1 (323-446)||(29437890-29438014)
chr1 (542-594)||(41803768-41803820)
chr1 (325-447)||(6437409-6437532)
chr1 (147-218)||(19914400-19914471)
chr1 (147-218)||(19924688-19924759)
chr1 (532-595)||(29437451-29437514)
chr1 (145-218)||(30889992-30890065)
chr1 (146-218)||(13629336-13629408)
chr1 (542-594)||(18974850-18974902)
chr1 (324-447)||(49398340-49398463)
chr1 (527-586)||(29760799-29760858)
chr1 (532-587)||(49398189-49398244)
chr1 (527-607)||(49428866-49428942)
chr1 (148-218)||(3732422-3732492)
chr1 (324-377)||(12789789-12789842)
chr1 (332-377)||(33285779-33285824)
chr1 (324-377)||(49260009-49260062)
chr1 (324-372)||(35585248-35585296)
chr1 (347-447)||(42570226-42570326)
chr1 (532-584)||(42570398-42570450)
chr1 (146-218)||(47652660-47652732)
chr1 (145-232)||(8473714-8473801)
chr1 (258-313)||(8548677-8548732)
chr1 (344-447)||(29760604-29760707)
chr1 (147-261)||(22397753-22397867)
chr1 (324-377)||(23344345-23344398)
chr1 (332-377)||(39855578-39855623)
chr1 (350-447)||(41803903-41804000)
chr1 (542-586)||(13974468-13974512)
chr1 (249-313)||(19159624-19159688)
chr1 (324-372)||(37779945-37779993)
chr1 (258-313)||(3728745-3728800)
chr1 (258-313)||(3943984-3944039)
chr1 (258-313)||(26879303-26879358)
chr1 (258-313)||(29622432-29622487)
chr1 (147-261)||(2365168-2365282)
chr1 (249-287)||(3983088-3983126)
chr1 (263-313)||(3993851-3993901)
chr1 (324-377)||(14172167-14172221)
chr1 (532-586)||(14172373-14172427)
chr1 (324-377)||(26497826-26497880)
chr1 (249-287)||(31945895-31945933)
chr1 (532-586)||(36911414-36911468)
chr1 (343-377)||(38043550-38043584)
chr1 (544-586)||(51271344-51271386)
chr1 (343-372)||(16530651-16530680)
chr1 (343-372)||(24268712-24268741)
chr1 (324-443)||(26633606-26633727)
chr1 (146-175)||(30910115-30910144)
chr1 (324-372)||(39063290-39063339)
chr1 (324-369)||(13148995-13149036)
chr1 (326-377)||(13287491-13287543)
chr1 (249-313)||(13636130-13636194)
chr1 (349-377)||(17373926-17373954)
chr1 (146-186)||(29622545-29622585)
chr1 (146-218)||(43011760-43011832)
chr1 (532-595)||(49925155-49925216)
[»] scaffold0494 (4 HSPs)
scaffold0494 (249-447)||(5332-5534)
scaffold0494 (524-576)||(5597-5649)
scaffold0494 (146-236)||(11504-11594)
scaffold0494 (591-632)||(5631-5671)
[»] scaffold0094 (1 HSPs)
scaffold0094 (338-447)||(74-183)
[»] scaffold0176 (4 HSPs)
scaffold0176 (314-445)||(525-656)
scaffold0176 (514-586)||(388-460)
scaffold0176 (314-447)||(3453-3587)
scaffold0176 (512-586)||(3318-3384)
[»] scaffold0199 (2 HSPs)
scaffold0199 (314-447)||(10748-10881)
scaffold0199 (249-313)||(12396-12459)
[»] scaffold1606 (1 HSPs)
scaffold1606 (148-239)||(9-100)
[»] scaffold0101 (1 HSPs)
scaffold0101 (146-313)||(41030-41197)
[»] scaffold0192 (1 HSPs)
scaffold0192 (532-594)||(16688-16750)
[»] scaffold0293 (2 HSPs)
scaffold0293 (245-313)||(730-798)
scaffold0293 (151-259)||(750-858)
[»] scaffold0744 (2 HSPs)
scaffold0744 (146-261)||(449-563)
scaffold0744 (261-313)||(431-483)
[»] scaffold0859 (1 HSPs)
scaffold0859 (324-377)||(2107-2161)
[»] scaffold0038 (1 HSPs)
scaffold0038 (249-313)||(50048-50112)
[»] scaffold0618 (2 HSPs)
scaffold0618 (532-586)||(4175-4229)
scaffold0618 (325-377)||(3965-4018)
[»] scaffold0025 (1 HSPs)
scaffold0025 (324-371)||(154366-154415)
[»] scaffold0634 (1 HSPs)
scaffold0634 (253-313)||(7423-7483)


Alignment Details
Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 101)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 147 - 447
Target Start/End: Complemental strand, 55799700 - 55799399
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||| ||    
T  55799700 tgagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatgcccctc---agtttgctaccgaggtttttaggaaatcggcg 55799604  T
Q  247 gtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg 342  Q
    | ||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    |||||| ||||||||||||||||||||||    
T  55799603 gcagttaacagccgaagtttttaggaatccggcggcagttaagtgccgagtaaaacctcggtagttaactaccgaggcgaatgttataagaacagaactg 55799504  T
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  55799503 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 55799404  T
Q  443 agtaa 447  Q
    |||||    
T  55799403 agtaa 55799399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 148 - 447
Target Start/End: Original strand, 41793265 - 41793567
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| | ||||| |||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| || |||    
T  41793265 gagaattgctgttcccacatatagtttggctgtgccatacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttag-aaaccggcgg 41793363  T
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgc 343  Q
     | ||||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||||||||||| |    
T  41793364 caattaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagaacagaacttc 41793463  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  41793464 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaa 41793563  T
Q  444 gtaa 447  Q
    ||||    
T  41793564 gtaa 41793567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 152 - 447
Target Start/End: Original strand, 6175785 - 6176080
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||| ||||||||||| | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||     ||| |||    
T  6175785 attgttgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttgggaac----cggcagt 6175880  T
Q  252 taactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcatag 347  Q
    |||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||||||||    |||||||||||||||||||| ||||||| |||||    
T  6175881 taactgccgaagtttttaggacaccggcggcagttaagtgccaaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaacttcatag 6175980  T
Q  348 gagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  6175981 gagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaagtaa 6176080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 146 - 447
Target Start/End: Complemental strand, 49096492 - 49096188
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | |||||  ||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||| | | |    
T  49096492 ttgagaattgctgttcccacatatagtttggttgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaggtttttaggaactgg-c 49096394  T
Q  246 ggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaact 341  Q
    || |||||||||||||||||||| |||  ||||||||| ||| ||||| || ||||||||||||||||    |||||||||||||||||||| |||||||    
T  49096393 ggcagttaactgccgaagtttttgggacaccggcggcatttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaact 49096294  T
Q  342 gcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatac 441  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  49096293 tcataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaac 49096194  T
Q  442 aagtaa 447  Q
    ||||||    
T  49096193 aagtaa 49096188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Original strand, 6176145 - 6176265
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6176145 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 6176244  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  6176245 ta-ggttgaattgatcgccata 6176265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Original strand, 41793632 - 41793752
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  41793632 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 41793731  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  41793732 ta-ggttgaattgatcgccata 41793752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Complemental strand, 49096123 - 49096003
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  49096123 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 49096024  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  49096023 ta-ggttgaattgatcgccata 49096003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 513 - 633
Target Start/End: Original strand, 21016008 - 21016127
Alignment:
Q  513 gattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagtat 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21016008 gattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtgt 21016107  T
Q  613 agggttgaattgatcgccata 633  Q
    | |||||||||||||||||||    
T  21016108 a-ggttgaattgatcgccata 21016127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 40352406 - 40352539
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||||||||    
T  40352406 ccgaggaaaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttgaattatccaaggtgcgattttgagtcatttgaagcc 40352505  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||| |||||||||| ||||| ||| ||||||||    
T  40352506 attacaagccaatttcaatcacaaaaacaagtaa 40352539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 513 - 632
Target Start/End: Original strand, 40352605 - 40352723
Alignment:
Q  513 gattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagtat 612  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  40352605 gattatataggttcgattatattgatttgttgattttatgatatcttaggatagtttaggttagaatggttagaactgttaggatagtttagcttagtat 40352704  T
Q  613 agggttgaattgatcgccat 632  Q
    | ||||||||||||||||||    
T  40352705 a-ggttgaattgatcgccat 40352723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 512 - 615
Target Start/End: Complemental strand, 55799334 - 55799231
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  55799334 cgattatataggttcgattatattgatttgttgattttatgatatgttaggataatttaggttagaatggttagaattgttaggatagtttaggttagta 55799235  T
Q  612 tagg 615  Q
    ||||    
T  55799234 tagg 55799231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 299 - 447
Target Start/End: Original strand, 21015790 - 21015942
Alignment:
Q  299 aaacctcggtagtta----ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaa 394  Q
    |||||||||||||||    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| |    
T  21015790 aaacctcggtagttaactgccgaggaaaacgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcga 21015889  T
Q  395 ttttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||||||||||||||||||||  |||||||||| ||||| ||| ||||||||    
T  21015890 ttttgagtcatttgaagccattccaagccaatttcaatcacaaaaacaagtaa 21015942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 49169236 - 49169123
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| || |||    
T  49169236 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaaccggcgg 49169137  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  49169136 cagttaactgccga 49169123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 54633746 - 54633859
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| || |||||||||||||||||| | |||||||||| || |||    
T  54633746 gagaattgctgttcccacatgttgtttgactgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaaggttttaggaaaccggcgg 54633845  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  54633846 cagttaactgccga 54633859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 143 - 261
Target Start/End: Original strand, 30723050 - 30723168
Alignment:
Q  143 aagttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatc 242  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| || |||| ||||||||||||| |||||||||||| |    
T  30723050 aagtagagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggtagtttgctaccgaagtttttaggaaacc 30723149  T
Q  243 gacggtagttaactgccga 261  Q
    ||||| | |||||||||||    
T  30723150 gacggcaattaactgccga 30723168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 31425458 - 31425344
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| || || ||    
T  31425458 tgagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggcaaccggcg 31425359  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  31425358 gcagttaactgccga 31425344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 322 - 447
Target Start/End: Complemental strand, 28083985 - 28083860
Alignment:
Q  322 aatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||  ||||  |||    
T  28083985 aatgttataagaacataacagcataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaattcattccaag 28083886  T
Q  422 ccaattttaatcataaatacaagtaa 447  Q
    ||||||| ||||| ||| ||||||||    
T  28083885 ccaatttcaatcacaaaaacaagtaa 28083860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 37562997 - 37563112
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||||||||| |||||| || |||||||||||||||||| |||||||||||| || |    
T  37562997 ttgagaattgctgttcccacatgttgtttggctgtgtcacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 37563096  T
Q  246 ggtagttaactgccga 261  Q
    || | |||||||||||    
T  37563097 ggcaattaactgccga 37563112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 28083795 - 28083721
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  28083795 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttataatggttaga 28083721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 37868073 - 37867991
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||    
T  37868073 cgattatataggttcgactatattgatttgttgattttatgatatgttaggatagttaaggttataatggttagaattgttag 37867991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 49563789 - 49563887
Alignment:
Q  163 cacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagttaactgccga 261  Q
    ||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  49563789 cacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggcagttaactgccga 49563887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 1087792 - 1087907
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | || || |||| |||||  |||||||||| |||||| || |||||||||||||||||| ||||||||||||||| |    
T  1087792 ttgagaattgctgttcccacatatagtatggctgtgccacatcagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaatcggc 1087891  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  1087892 ggcagttaactgccga 1087907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 39590639 - 39590437
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-c 343  Q
    ||||||||||||||||||| || ||| | || |||||||  |||| || ||||||||||||||||    |||| || ||||||||||||||||||| | |    
T  39590639 agttaactgccgaagtttt-agaaatacagctgcagttaactgccgaggaaaacctcggtagttaactgccgatgaaaatgttataagaacagaacagac 39590541  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    ||||||||||||||||||| |||||||||||||| ||| | |  | ||| ||||||||  |||||||||||||  ||| |||||| ||||| ||| ||||    
T  39590540 ataggagtttccaaaactcaattgttgcgttttttattctccttgctgcgattttgagcaatttgaagccattccaagtcaatttcaatcacaaaaacaa 39590441  T
Q  444 gtaa 447  Q
    ||||    
T  39590440 gtaa 39590437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 40358415 - 40358306
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||| ||||||||||||||||| |||| ||||||||||||||||| |||||| || ||| |||||||||||||| |||||| ||||| || ||| |||    
T  40358415 attgctattcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcgacagtttgctaccgaagttttttggaaaccggcggcagt 40358316  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  40358315 taactgccga 40358306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 1089723 - 1089610
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | || || |||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||| || |||    
T  1089723 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggcgg 1089624  T
Q  248 tagttaactgccga 261  Q
     |||||| ||||||    
T  1089623 cagttaaatgccga 1089610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 56140684 - 56140560
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||   | | |||||||| ||||||||| |||| ||||||||  ||||    
T  56140684 tgttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttgagttatttcaagccattccaagc 56140585  T
Q  423 caattttaatcataaatacaagtaa 447  Q
    |||||| ||||| ||| ||||||||    
T  56140584 caatttcaatcacaaaaacaagtaa 56140560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 512 - 587
Target Start/End: Complemental strand, 39590373 - 39590298
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaa 587  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| ||||||||||| |||||||    
T  39590373 cgattatataggttcgattatattgattttatgattttatgatatgttaggatagtataggttagaattgttagaa 39590298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 148 - 263
Target Start/End: Complemental strand, 41801076 - 41800961
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| | || || ||||  |||||||||||||||  ||||||||  |||||||||||||||||| ||||| |||||| || |||    
T  41801076 gagaattgctgttcccacatatagtatggctgtgtcacacgagtaaaatattaaaatgtcattcggcagtttgctaccgaagttttaaggaaaccggcgg 41800977  T
Q  248 tagttaactgccgaag 263  Q
     ||||| |||||||||    
T  41800976 cagttagctgccgaag 41800961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 314 - 443
Target Start/End: Original strand, 34528234 - 34528364
Alignment:
Q  314 ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagc 412  Q
    ||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||| |||||| ||| | |  | ||| ||||||||  |||||||||    
T  34528234 ccgaggaaaatgttataagaacataacggacataggagtttccaaaactccattgttgtgtttttgattatccttgctgcgattttgagcaatttgaagc 34528333  T
Q  413 cattagaagccaattttaatcataaatacaa 443  Q
    ||||  |||||||||| ||||| ||| ||||    
T  34528334 cattccaagccaatttcaatcacaaaaacaa 34528364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 956076 - 956128
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  956076 ttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 956128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 44558940 - 44558992
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44558940 ttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 44558992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 532 - 595
Target Start/End: Original strand, 6281159 - 6281222
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttagg 595  Q
    |||||||||  |||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  6281159 tattgattttatgatttaatgatatgttaggatagtttaggttagaatggttagaattgttagg 6281222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 314 - 443
Target Start/End: Complemental strand, 1044548 - 1044418
Alignment:
Q  314 ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagc 412  Q
    ||||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||   | | |||||||| ||||||||  |||| |||     
T  1044548 ccgaggaaaatgttataagaatagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagt 1044449  T
Q  413 cattagaagccaattttaatcataaatacaa 443  Q
    ||||  |||||||||| ||||| ||| ||||    
T  1044448 catttcaagccaatttcaatcacaaaaacaa 1044418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 324 - 447
Target Start/End: Original strand, 44558728 - 44558852
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||| ||||||| | |||||||||||||||||||||||| || ||||||| ||| | | |||||||||||| ||  ||| |||| ||||  ||||    
T  44558728 tgttataagtacagaacagacataggagtttccaaaactccattattacgtttttgattctcctaggtgcaatttttagcaattcgaagtcattccaagc 44558827  T
Q  423 caattttaatcataaatacaagtaa 447  Q
    |||||| ||||| ||| ||||||||    
T  44558828 caatttcaatcacaaaaacaagtaa 44558852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 54634091 - 54634023
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  54634091 cggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 54634023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 9491083 - 9491008
Alignment:
Q  512 cgattatataggttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||| |||||||||||| |||||  |||||||||||||||||| ||||| ||||||||||||| ||||||    
T  9491083 cgattatatatgttcgattatatagattttattgattttatgatatgttaggatattttaggttagaattgttaga 9491008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 31242148 - 31242263
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||| ||||||| |  ||||||||| ||||||||||||| |||  ||||| || |||||||||  || |||| |||||||| ||| || |    
T  31242148 ttgagaattgctgtgcccacatttgatttgactgtgccacacgagtaaattactcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggc 31242247  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  31242248 ggcagttaactgccga 31242263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 324 - 447
Target Start/End: Original strand, 51426616 - 51426742
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcg--tttttaatttttcaaggtgcaattttgagtcatttgaagccattagaa 420  Q
    ||||||||| ||||||| | ||| ||||||||||||||||||||||| ||  ||||| ||||| | |||||| ||||||||  |||||||| ||||  ||    
T  51426616 tgttataagtacagaacagacattggagtttccaaaactccattgttacgttttttttattttcctaggtgcgattttgagcaatttgaagtcattccaa 51426715  T
Q  421 gccaattttaatcataaatacaagtaa 447  Q
    |||||||| ||||| ||| ||||||||    
T  51426716 gccaatttcaatcacaaaaacaagtaa 51426742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 447
Target Start/End: Complemental strand, 37868264 - 37868138
Alignment:
Q  322 aatgttataagaacagaactgc-ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaa 420  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||||| | |||||   | | |||||||| ||||||||  |||| ||| ||||  ||    
T  37868264 aatgttataagaacagaacagatataggagtttccaaaactccattgttacatttttttatctccaaggtgcgattttgagctatttcaagtcatttcaa 37868165  T
Q  421 gccaattttaatcataaatacaagtaa 447  Q
    |||||||| ||||| ||| ||||||||    
T  37868164 gccaatttcaatcacaaaaacaagtaa 37868138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 39773680 - 39773630
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaatac 198  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  39773680 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatac 39773630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 49090381 - 49090451
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  49090381 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 49090451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 43887579 - 43887632
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  43887579 tgttatatgaacagaacagcataggagtttccaaaactccattgttacgttttt 43887632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 34151899 - 34151951
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  34151899 ttgattttatgatatgttaggatagtttatgttacaatggttagaattgttag 34151951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 37563356 - 37563288
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  37563356 cggtagtaaactgtcgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 37563288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 39773401 - 39773469
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||  |||| || ||||||||||||||||    
T  39773401 cggtagtaaactgccgaagtttttaggaaaccggcagcagttaactgccgaggaaaacctcggtagtta 39773469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 51037608 - 51037536
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| ||||||||||| | ||||| |||| ||||||||||||| |||  ||||||||||||||||||    
T  51037608 ttgagaattgttgttcccacatttagtttggctgtgccacacgagtaaattactcaaatgtccctcggcagtt 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 52529210 - 52529278
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| |||||||||||||||||||||  ||||||||||||  |||| || ||||||||||||||||    
T  52529210 cggtagtaaactgccgaagtttttaggaaatcggcggcagttaactgccgaggaaaacctcggtagtta 52529278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 6181931 - 6181860
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||| ||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  6181931 tgagaattgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 6181860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 21023027 - 21022956
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||||||||||||||| | ||||| |||| ||||||||||||| |||  ||||| ||||||||||||    
T  21023027 tgagaattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagtt 21022956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 26792385 - 26792270
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||| ||||||||||| | ||||| |||| ||||||||||||| |||  ||||| || |||||| ||  || |||| |||||||| ||| || |    
T  26792385 ttgagaattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggcaattaactgccgaagtttttagtaaaccggc 26792286  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  26792285 ggcagttaactgccga 26792270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 56140482 - 56140423
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  56140482 gattttattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 56140423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 9491278 - 9491224
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  9491278 tgttataagaacagaacagacataggagtttccaaaactccattgttacgttttt 9491224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 21410211 - 21410265
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  21410211 tgttataagaacaaaacagacataggagtttccaaaactccattgttgcgttttt 21410265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 37959507 - 37959453
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  37959507 tattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 37959453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 49572685 - 49572631
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  49572685 tattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 49572631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 52529146 - 52529260
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||| | || || |||| ||||||||||||  |||  ||||| || |||| |||   || |||| ||||||||||||||| ||    
T  52529146 tgagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaatcggcg 52529245  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  52529246 gcagttaactgccga 52529260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 26932518 - 26932631
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| | ||||| ||||  |||||||||||| |||  |||||||| |||| |||   || |||| ||||||||  || || |||    
T  26932518 gagaattgctgttcccacatatagtttggctgtgtcacacgagtaaattactcaaatgtccttcggtagtaaactgccgaagtttttagacaaccggcgg 26932617  T
Q  248 tagttaactgccga 261  Q
    ||||||||||||||    
T  26932618 tagttaactgccga 26932631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 34528435 - 34528501
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    ||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||| ||||||    
T  34528435 cgattatataggttcgattatattga--------ttttatgatatgttaggatagtttaggttagaattgttaga 34528501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 14201667 - 14201595
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||||| | ||||| || | ||||||||||||| |||  ||||| ||||||||||||    
T  14201667 ttgagaattgctgttcccacatttggtttggctatgccacacgagtaaattactcaaatgcccctcggcagtt 14201595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 30726817 - 30726749
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| |||||||||| |||||||||| ||||| |||||||  |||| || ||||||||||||||||    
T  30726817 cggtagtaaactgccgaaatttttaggaaaccggcagcagttaactgccgaggaaaacctcggtagtta 30726749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 33384090 - 33384134
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  33384090 ttgattttatgatatgttaggatagtttaggttagaattgttaga 33384134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 51026134 - 51026186
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttt 376  Q
    ||||||| |||||||||  ||||||||||||||||||||||||||| ||||||    
T  51026134 tgttatatgaacagaacaacataggagtttccaaaactccattgttacgtttt 51026186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 51426823 - 51426867
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  51426823 ttgattttatgatatgttaggatagtttaggttaaaatggttaga 51426867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 1089647 - 1089592
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  1089647 ccgaagtttttaggaaaccggcggcagttaaatgccgaggaaaacctcggtagtta 1089592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 54634156 - 54634041
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | || || |||| ||||||||||||  |||  ||||| || |||| |||   || |||| |||||||||||| || |    
T  54634156 ttgagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 54634057  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  54634056 ggcagttaactgccga 54634041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 1044318 - 1044264
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  |||||||||||||||||  |||||||||||||||||| ||||||    
T  1044318 tattgattttatgattttatgatatgttaagatagtttaggttagaattgttaga 1044264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 4909901 - 4909955
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||| | ||||| |||||||||||| ||||||||||||||||    
T  4909901 tgttataagaacagaacaggcatagaagtttccaaaacaccattgttgcgttttt 4909955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 13173168 - 13173238
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | || || |||| |||||||||||||||||||||||| || ||| |||||    
T  13173168 gagaattgatgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcgacagtt 13173238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 13182237 - 13182167
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | || || |||| |||||||||||||||||||||||| |  |||||||||    
T  13182237 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcctttcggcagtt 13182167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 26792314 - 26792252
Alignment:
Q  251 ttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||||||| || |||||||||||||  |||| || |||| |||||||||||    
T  26792314 ttaactgccgaagtttttagtaaaccggcggcagttaactgccgaggaaaatctcggtagtta 26792252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 377
Target Start/End: Original strand, 36774793 - 36774843
Alignment:
Q  327 tataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    |||| ||||| ||| |||||||||||||||||||||||||||| |||||||    
T  36774793 tatatgaacataacagcataggagtttccaaaactccattgttacgttttt 36774843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 40832577 - 40832651
Alignment:
Q  144 agttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||||||| | ||||| || | ||||||||||||| ||   ||||| ||||||||||||    
T  40832577 agttgagaattgctgttcccacatttggtttggctatgccacacgagtaaattattcaaatgcccctcggcagtt 40832651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 49422380 - 49422434
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  |||||| |||||||||| ||||||||||||||||||| ||||||    
T  49422380 tattgattttatgatttcatgatatgttaggatagtttaggttagaattgttaga 49422434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 30726880 - 30726767
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| | || ||  ||| |||||||||||||||||  |||||||| |||| |||   || ||||  ||||||||||| || | |    
T  30726880 gagaattgctgttcccacatatagtatggatgtgccacacgagtaaaatacggaaatgtccttcggtagtaaactgccgaaatttttaggaaaccggcag 30726781  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  30726780 cagttaactgccga 30726767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 9893404 - 9893308
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcg 243  Q
    |||| |||||||||||||||| | || || |||| |||||| |||||||||| |||||| || |||||||||  || | || |||||||| ||||||    
T  9893404 tgaggattgctgttcccacatatagtatggctgtgccacacaagtaaaatacgaaaatgcccttcggcagttaactgctgaagtttttagtaaatcg 9893308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 14968550 - 14968598
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcg 372  Q
    ||||||| |||||||||  |||||||||||||||||| |||||||||||    
T  14968550 tgttatatgaacagaacaacataggagtttccaaaacaccattgttgcg 14968598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 26932581 - 26932649
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||||||||||  | ||||||| |||||  |||| || ||||||||||||||||    
T  26932581 cggtagtaaactgccgaagtttttagacaaccggcggtagttaactgccgaggaaaacctcggtagtta 26932649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 236
Target Start/End: Original strand, 31421640 - 31421728
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttag 236  Q
    |||||||||||||| ||||| | || || |||| |||||| |||||||||| |||||| || |||||||||  || |||| ||||||||    
T  31421640 gagaattgctgttctcacatatagtatggctgtgccacaccagtaaaatacgaaaatgcccttcggcagttaactgccgaagtttttag 31421728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 33383904 - 33384008
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||||||||||||||||||||||||||  ||||||   | | | |||||| ||||||||  |||| ||| ||||  |||||||||| ||||| ||| |||    
T  33383904 cataggagtttccaaaactccattgttatgttttttgatctcctaggtgcgattttgagcaatttcaagtcattccaagccaatttcaatcacaaaaaca 33384003  T
Q  443 agtaa 447  Q
    |||||    
T  33384004 agtaa 33384008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 49572894 - 49572771
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||| ||||||| | ||||||| ||||||||||||||||||| |||||||   | |   ||||||||||||||| || || ||| ||||  ||||    
T  49572894 tgttataagtacagaacagacataggaatttccaaaactccattgttacgttttttgatctcttaggtgcaattttgag-caatttaagtcattccaagc 49572796  T
Q  423 caattttaatcataaatacaagtaa 447  Q
    |||||| ||||| ||| ||||||||    
T  49572795 caatttcaatcacaaaaacaagtaa 49572771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 49815852 - 49815900
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcg 372  Q
    ||||||| ||||| |||  ||||||||||||||||||||||||||||||    
T  49815852 tgttatatgaacataacaacataggagtttccaaaactccattgttgcg 49815900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 372
Target Start/End: Original strand, 2567409 - 2567444
Alignment:
Q  337 gaactgcataggagtttccaaaactccattgttgcg 372  Q
    |||| |||||||||||||||||||||||||||||||    
T  2567409 gaacagcataggagtttccaaaactccattgttgcg 2567444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 31425381 - 31425326
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| | |||||||||||||  |||| || ||||||||||||||||    
T  31425381 ccgaagtttttaggcaaccggcggcagttaactgccgaggaaaacctcggtagtta 31425326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 37563075 - 37563130
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| ||||||||| |||  |||| || ||||||||||||||||    
T  37563075 ccgaagtttttaggaaaccggcggcaattaactgccgaggaaaacctcggtagtta 37563130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 40358343 - 40358288
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||| |||| |||||||||||||  |||| || ||||||||||||||||    
T  40358343 ccgaagttttttggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 40358288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 41801000 - 41800945
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||| ||||| |||||||||||||| |||| |  ||||||||||||||||    
T  41801000 ccgaagttttaaggaaaccggcggcagttagctgccgaagaaaacctcggtagtta 41800945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 49169160 - 49169105
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || || |||||||||||||    
T  49169160 ccgaagtttttaggaaaccggcggcagttaactgccgaggaatacctcggtagtta 49169105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 49563850 - 49563905
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  49563850 ccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 49563905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 7485799 - 7485729
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | ||||| || | ||||||||||||  |||| ||||| ||||||||||||    
T  7485799 gagaattgttgttcccacatttggtttggctatgccacacgagtaatttacccaaatgcccctcggcagtt 7485729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 31242217 - 31242255
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    |||||||||||||||||||||| || |||||||||||||    
T  31242217 agttaactgccgaagtttttagtaaaccggcggcagtta 31242255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 49566521 - 49566483
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  49566521 agttaactgccgaggtttttaggaaaccggcggcagtta 49566483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 55588422 - 55588352
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | ||||| || | ||||||||||||  |||| ||||| || |||||||||    
T  55588422 gagaattgctgttcccacatttggtttggctatgccacacgagtaatttacccaaatgcccttcggcagtt 55588352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 579
Target Start/End: Original strand, 241796 - 241833
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaat 579  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  241796 ttgattttatgatatgttaggatagtttatgttagaat 241833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 1309252 - 1309183
Alignment:
Q  149 agaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| |||||||| | || ||  ||| ||||||||||||||||| |||||| || |||||||||    
T  1309252 agaattgctgctcccacatatagtatggttgtgccacacgagtaaaatacaaaaatgcccttcggcagtt 1309183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 175
Target Start/End: Original strand, 15995654 - 15995683
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttg 175  Q
    ||||||||||||||||||||||||||||||    
T  15995654 ttgagaattgctgttcccacatgttgtttg 15995683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 16983524 - 16983587
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||||||| || ||||||||  ||||||  |||| || ||||||||||||||||    
T  16983524 agttaactgccgaagtttt-agaaatccggctacagttaactgccgagaaaaacctcggtagtta 16983587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 16984232 - 16984169
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||| |||||| |||||||| |||||||  |||| || ||||||||| ||||||    
T  16984232 agttaactgccgaag-ttttagaaatccggctgcagttaactgccgaggaaaacctcgatagtta 16984169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 21022959 - 21022896
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||||||| || ||| |||| |||||||  |||| || ||||||||||||||||    
T  21022959 agttaactgccgaagtttt-agaaatacggctgcagttaactgccgaggaaaacctcggtagtta 21022896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 24076855 - 24076807
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgc 371  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||||||||    
T  24076855 tgttataagaacataacagacataggaatttccaaaactccattgttgc 24076807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 34151717 - 34151817
Alignment:
Q  347 ggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagta 446  Q
    |||||||| ||||||||||||||  |||||| ||| | | || ||| ||||||||  |||||||| ||||  |||||||||| ||||| |||  ||||||    
T  34151717 ggagtttctaaaactccattgttatgttttttattctcctagatgcgattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaccaagta 34151816  T
Q  447 a 447  Q
    |    
T  34151817 a 34151817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 372
Target Start/End: Complemental strand, 45941378 - 45941350
Alignment:
Q  344 ataggagtttccaaaactccattgttgcg 372  Q
    |||||||||||||||||||||||||||||    
T  45941378 ataggagtttccaaaactccattgttgcg 45941350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 213; Significance: 1e-116; HSPs: 73)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 146 - 447
Target Start/End: Original strand, 19035137 - 19035441
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || |    
T  19035137 ttgagaattgctgttcccacatatagtttgactgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggaac-cggc 19035235  T
Q  246 ggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaact 341  Q
    || ||||||||||||||||| ||||||  ||||||||||||| ||||| || ||||||||||||||||    ||||||||||||||||||||||||||||    
T  19035236 ggcagttaactgccgaagttcttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagaacagaact 19035335  T
Q  342 gcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatac 441  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  19035336 tcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaac 19035435  T
Q  442 aagtaa 447  Q
    ||||||    
T  19035436 aagtaa 19035441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 245 - 447
Target Start/End: Original strand, 27659937 - 27660143
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaac 340  Q
    ||||||| ||||||||||||||||||||| ||| |||| ||||  |||| || ||||||||||||||||    ||||||| |||||||||||||||||||    
T  27659937 cggtagtaaactgccgaagtttttaggaaaccgacggcggttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgttataagaacagaac 27660036  T
Q  341 tgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaata 440  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||| |    
T  27660037 tgcataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaa 27660136  T
Q  441 caagtaa 447  Q
    |||||||    
T  27660137 caagtaa 27660143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 512 - 632
Target Start/End: Original strand, 27660208 - 27660327
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27660208 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 27660307  T
Q  612 tagggttgaattgatcgccat 632  Q
    || ||||||||||||||||||    
T  27660308 ta-ggttgaattgatcgccat 27660327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Original strand, 19035506 - 19035626
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19035506 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 19035605  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  19035606 ta-ggttgaattgatcgccata 19035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 30711231 - 30711030
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    |||||||||||||||||||||||||  ||||||||||||  |||| || |||||||||  | |||    ||||||| |||||||||||||||||||||||    
T  30711231 agttaactgccgaagtttttaggaagtcggcggcagttaactgccgaggaaaacctcgacatttaactaccgaggaaaatgttataagaacagaactgca 30711132  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||||||||||||||||   ||||| |||||||| | |||||||| |||||||||||||||||||||||| |||||||||||||| | ||| |||||    
T  30711131 taggagtttccaaaactccaagtttgcg-ttttaattatccaaggtgcgattttgagtcatttgaagccattacaagccaattttaataacaaaaacaag 30711033  T
Q  445 taa 447  Q
    |||    
T  30711032 taa 30711030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 524 - 632
Target Start/End: Complemental strand, 30710967 - 30710860
Alignment:
Q  524 ttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagtatagggttgaatt 623  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30710967 ttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtata-ggttgaatt 30710869  T
Q  624 gatcgccat 632  Q
    |||||||||    
T  30710868 gatcgccat 30710860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 8574791 - 8574924
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||| ||||||||||||||||||||    
T  8574791 ccgaggaaaatgttataagaatagaactgcataggagtttccaaaactccattgttgcgttttgaattatccaaggtgcgattttgagtcatttgaagcc 8574890  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||| |||||||||| ||||| ||| ||||||||    
T  8574891 attacaagccaatttcaatcacaaaaacaagtaa 8574924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 314 - 447
Target Start/End: Complemental strand, 11348504 - 11348371
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||||     
T  11348504 ccgaggaaaatgttataagaacagaacagcataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagct 11348405  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||  |||||||||| ||||| ||| ||||||||    
T  11348404 attccaagccaatttcaatcacaaaaacaagtaa 11348371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 38855783 - 38855581
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||  ||||| |||||||||||||  |||| || ||||||||||||||||    || |||| | |||||||||||||  ||  ||    
T  38855783 agttaactgccgaagtttgaaggaaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccaaggaaattgttataagaacaacacaaca 38855684  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||||||||||||||||||||||||||||| | | |  ||| ||| ||||||| |||||||||||||||| |||||||||| ||||| ||| |||||    
T  38855683 taggagtttccaaaactccattgttgcgtttttgagtatcaaagttgcgattttgaatcatttgaagccattacaagccaatttcaatcacaaaaacaag 38855584  T
Q  445 taa 447  Q
    |||    
T  38855583 taa 38855581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 5866 - 5999
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| ||||||||| | |||||||  ||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||    
T  5866 ccgaggaaaatgttataggtacagaacaacataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagcc 5965  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||  |||||||||| ||||| ||| ||||||||    
T  5966 attccaagccaatttcaatcacaaaaacaagtaa 5999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 14281041 - 14280926
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    ||||| |||||||||||||||||||||||| ||||  ||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || |    
T  14281041 ttgagtattgctgttcccacatgttgtttggctgtgtcacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggc 14280942  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  14280941 ggcagttaactgccga 14280926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 513 - 594
Target Start/End: Original strand, 6065 - 6146
Alignment:
Q  513 gattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  6065 gattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaattgttagaattgttag 6146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 28238073 - 28238186
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||| || |||    
T  28238073 gagaattgctcttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggcgg 28238172  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  28238173 cagttaactgccga 28238186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 8539348 - 8539266
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  8539348 cgattatataggttcgattatattgatttgttgattttatgatatgttagaataatttaggttagaatggttagaattgttag 8539266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 30887239 - 30887157
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30887239 cgattatatatgttcgactatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 30887157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 512 - 632
Target Start/End: Original strand, 8574989 - 8575099
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||         ||||||||||||||||||||||||||||||||    
T  8574989 cgattatataggtttgattatgttgatttgttgattttatgatatgttaggatagttta---------ggttagaattgttaggatagtttaggttagta 8575079  T
Q  612 tagggttgaattgatcgccat 632  Q
    || ||||||||||||||||||    
T  8575080 ta-ggttgaattgatcgccat 8575099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 146 - 263
Target Start/End: Complemental strand, 19041258 - 19041141
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | || || |||| ||||||||||||||||||||||||| | |||||||||||||||||| ||||| | ||||||| |    
T  19041258 ttgagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgttcttcggcagtttgctaccgaagttttaacgaaatcggc 19041159  T
Q  246 ggtagttaactgccgaag 263  Q
    || ||||| |||||||||    
T  19041158 ggcagttagctgccgaag 19041141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 11348306 - 11348224
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  11348306 cgattatataggttaaattatattgatctgttgattttatgatatgttaggatagtttaggttataatggttagaattgttag 11348224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 28876580 - 28876690
Alignment:
Q  151 aattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtag 250  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||| ||||| || ||| ||    
T  28876580 aattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagttttttggaaaccggcggcag 28876679  T
Q  251 ttaactgccga 261  Q
    |||||| ||||    
T  28876680 ttaactcccga 28876690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 37814515 - 37814629
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||  || ||||||||||||||||||  | ||||| ||| || ||    
T  37814515 tgagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacaaaaatacccttcggcagtttgctaccgaaatatttagtaaaccggcg 37814614  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  37814615 gcagttaactgccga 37814629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 314 - 447
Target Start/End: Complemental strand, 8539545 - 8539413
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||  || | ||| |||| |||||||||||||||||| |    
T  8539545 ccgaggaaaatgttataagaacaaaacagcataggagtttccaaaactccattgttgcgttttt-tttatccaatgtgcgattttgagtcatttgaagtc 8539447  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||  || ||||||  ||||| ||| ||||||||    
T  8539446 attccaaaccaattccaatcacaaaaacaagtaa 8539413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 11029076 - 11028874
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||  ||| | |||||||||||||  |||| || ||| |||||| |||||    ||||||| | |||||||||||||  ||  ||    
T  11029076 agttaactgccgaagtttgaaggcaaccggcggcagttaactgccgaggaaatcctcgggagttaactgccgaggaaattgttataagaacaacacaaca 11028977  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||||||||||||||||||||||||||||| | | |  ||| ||| |||| || |||||| ||| ||||| |||||||||| ||||| ||| |||||    
T  11028976 taggagtttccaaaactccattgttgcgtttttgagtatcaaagttgcgatttcgaatcattttaagtcattacaagccaatttcaatcacaaaaacaag 11028877  T
Q  445 taa 447  Q
    |||    
T  11028876 taa 11028874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 541193 - 541267
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  541193 cgattatataggttcgattatattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 541267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 8580618 - 8580505
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||| ||||||||| | ||||  |||| ||||||||||||| |||  ||||| || |||| |||||||| |||| ||||||||||||||| |||    
T  8580618 gagaattgctattcccacatatagtttagctgtgccacacgagtaaattactcaaatgcccttcggtagtttgctgccgaagtttttaggaaatcggcgg 8580519  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  8580518 cagttaactgccga 8580505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 540996 - 541127
Alignment:
Q  314 ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagc 412  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||| | |    ||| ||||||||  ||||||||     
T  540996 ccgaggaaaatgttataagaacagaacagacataggagtttccaaaactcccttgttgcgttttttattctcc---ttgctattttgagcaatttgaagt 541092  T
Q  413 cattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||  |||||||||| ||||| ||| ||||||||    
T  541093 cattccaagccaatttcaatcacaaaaacaagtaa 541127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 447
Target Start/End: Original strand, 41798842 - 41799022
Alignment:
Q  272 aatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccatt 366  Q
    |||||||| |||||||  |||| |  ||||||||||||||||    ||||||| ||||||||||||||| |||   ||||||||||||||||||||||||    
T  41798842 aatccggctgcagttaactgccgaagaaaacctcggtagttatctgccgaggaaaatgttataagaacataacaaacataggagtttccaaaactccatt 41798941  T
Q  367 gttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||| |||||||   | | ||| |||| ||||||||  |||| ||| ||||  |||||||||| ||||| ||| ||||||||    
T  41798942 gttacgttttttgatctccaatgtgcgattttgagctatttcaagacattccaagccaatttcaatcacaaaaacaagtaa 41799022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 313 - 429
Target Start/End: Complemental strand, 30887382 - 30887265
Alignment:
Q  313 accgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaag 411  Q
    |||||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||||   | | ||| |||| ||||||||  |||| |||    
T  30887382 accgaggaaaatgttataagaacataacagacataggagtttccaaaactccattgttacgttttttgatctccaatgtgcgattttgagctatttcaag 30887283  T
Q  412 ccattagaagccaatttt 429  Q
    |||||  |||||||||||    
T  30887282 ccattccaagccaatttt 30887265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 18309846 - 18309794
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  18309846 ttgattttatgatatgttaggatagtttaggttagaatggttaaaattgttag 18309794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 25499664 - 25499612
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  25499664 ttgattttatgatatgttaggatagtttaggttataatggttagaattgttag 25499612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 25499881 - 25499757
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| | |||||   | | | |||||| ||||||||  |||| ||| ||||| ||||    
T  25499881 tgttataagaacagaacagacataggagtttccaaaactccattgttacattttttgatctcctaggtgcgattttgagcaatttcaagtcattacaagc 25499782  T
Q  423 caattttaatcataaatacaagtaa 447  Q
    |||||| ||||| ||| ||||||||    
T  25499781 caatttcaatcacaaaaacaagtaa 25499757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 41202002 - 41202069
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||| |||||  ||||||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  41202002 gattatatagattttatgattttatgatatgttaggatagtttaggttagaatgattagaattcttag 41202069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 540 - 630
Target Start/End: Complemental strand, 11028789 - 11028709
Alignment:
Q  540 tgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagtatagggttgaattgatcgcc 630  Q
    ||||||||||||||||| || |||||||||||||||         ||||||||||||||||||||||||||||| ||||||||||||||||    
T  11028789 tgttgattttatgatattttaggatagtttaggtta---------gaattgttaggatagtttaggttagtata-ggttgaattgatcgcc 11028709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 11033601 - 11033531
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | || || |||| ||||| ||||||||||||||||||||| |||||||||    
T  11033601 gagaattgctgttcccacatatagtatggctgtgccacatgagtaaaataccaaaatgtccttcggcagtt 11033531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 27659873 - 27659987
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||| | ||||| |||| ||||||||||||| |||  ||||| || |||| |||   || |||| |||||||||||| |||||    
T  27659873 tgagaattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccgacg 27659972  T
Q  247 gtagttaactgccga 261  Q
    |  ||||||||||||    
T  27659973 gcggttaactgccga 27659987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 36348710 - 36348763
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  36348710 tgttatatgaacagaacagcataggagtttccaaaactccattgttacgttttt 36348763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 38860308 - 38860237
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||| ||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  38860308 tgagaattgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 38860237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 11027029 - 11027099
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  11027029 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 11027099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 630
Target Start/End: Complemental strand, 38855496 - 38855416
Alignment:
Q  540 tgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagtatagggttgaattgatcgcc 630  Q
    ||||||||||||||||| || |||||||||||||||         ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  38855496 tgttgattttatgatattttaggatagtttaggtta---------gaattgttatgatagtttaggttagtata-ggttgaattgatcgcc 38855416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 41799117 - 41799171
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  41799117 tattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 41799171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 1973251 - 1973198
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| |||||||    
T  1973251 tgttatatgaacagaacagcgtaggagtttccaaaactccattgttacgttttt 1973198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 326 - 377
Target Start/End: Complemental strand, 3603140 - 3603088
Alignment:
Q  326 ttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  3603140 ttataagaacagaacagacataggagtttccaaaactccattgttgcggtttt 3603088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 13837729 - 13837789
Alignment:
Q  253 aactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||||| || |||||||||||||  |||| || ||||||||||||||||    
T  13837729 aactgccgaagtttttagtaaaccggcggcagttaactgccgaggaaaacctcggtagtta 13837789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 34682541 - 34682585
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  34682541 ttgattttatgatatgttaggatagtttaggttagaattgttaga 34682585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 13837656 - 13837771
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| |  |||| |||| |||||||||||   ||| |||||| || ||||||||   || |||| |||||||| ||| || |    
T  13837656 ttgagaattgctgttcccacatttgctttggctgtgccacacgagtactttacaaaaatgcccttcggcagtaaactgccgaagtttttagtaaaccggc 13837755  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  13837756 ggcagttaactgccga 13837771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 28238149 - 28238204
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  28238149 ccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 28238204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 543 - 594
Target Start/End: Complemental strand, 35566848 - 35566797
Alignment:
Q  543 tgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||| ||||||    
T  35566848 tgattttatgatatgttaggatagtttaagttagaatgattagaactgttag 35566797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 377
Target Start/End: Complemental strand, 1696618 - 1696564
Alignment:
Q  323 atgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||| ||||| ||| |||||||||||||||||||||| ||||| |||||||    
T  1696618 atgttatatgaacataacagcataggagtttccaaaactcctttgttacgttttt 1696564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 3602934 - 3602880
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  ||||||||| ||||||| ||||||||||||||||||| ||||||    
T  3602934 tattgattttatgattttattatatgttaggatagtttaggttagaattgttaga 3602880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 7401862 - 7401808
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||| | ||||||| |||||||||||||||||||||| ||||    
T  7401862 tgttataagaacagaacagacataggaatttccaaaactccattgttgcggtttt 7401808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 20199932 - 20199878
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  |||||||||||||||||  |||||||||||||||||| ||||||    
T  20199932 tattgattttatgattttatgatatgttatgatagtttaggttagaattgttaga 20199878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 35567021 - 35566967
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||| ||| | ||||| |||||||||||||||||||||||||||||    
T  35567021 tgttataagaacaaaacagacatagaagtttccaaaactccattgttgcgttttt 35566967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 7483846 - 7483891
Alignment:
Q  332 gaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||    
T  7483846 gaacaaaacagcataggagtttccaaaactccattgttacgttttt 7483891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 30711298 - 30711185
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||| ||| ||||| | ||||| || | |||||| |||||| |||  |||||  |||||||||||  || |||| ||||||||||| ||| |||    
T  30711298 gagaattgcttttctcacatttagtttggctatgccacacaagtaaattacgcaaatgctcctcggcagttaactgccgaagtttttaggaagtcggcgg 30711199  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  30711198 cagttaactgccga 30711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 343 - 416
Target Start/End: Original strand, 34682356 - 34682429
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccatt 416  Q
    |||| |||||||||||||||||||||| ||||||| ||| | | |||||| ||||||||  |||||||| ||||    
T  34682356 catatgagtttccaaaactccattgttacgttttttattctcctaggtgcgattttgagcaatttgaagtcatt 34682429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 326 - 369
Target Start/End: Original strand, 1398685 - 1398729
Alignment:
Q  326 ttataagaacagaactg-cataggagtttccaaaactccattgtt 369  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  1398685 ttataagaacagaactgacataggagttttcaaaactccattgtt 1398729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 3892581 - 3892505
Alignment:
Q  142 aaagttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||| |||||||| ||||||||||| | |||||  | | ||||||||||||| |||  ||||||||||||||||||    
T  3892581 aaagtcgagaattgttgttcccacatttggtttggttatgccacacgagtaaattactcaaatgtccctcggcagtt 3892505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 14280963 - 14280908
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  14280963 ccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 14280908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 371
Target Start/End: Complemental strand, 18310040 - 18309993
Alignment:
Q  325 gttataagaacagaactg-cataggagtttccaaaactccattgttgc 371  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||    
T  18310040 gttataagaacataacagacataggagtttccaaaactccattgttgc 18309993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 28241939 - 28241868
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||| ||||||||||| | || || |||| |||||||||||||||| ||||||  || |||||||||    
T  28241939 tgagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatatcaaaatacccttcggcagtt 28241868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 559
Target Start/End: Complemental strand, 28881980 - 28881941
Alignment:
Q  520 taggttcgattatattgatttgttgattttatgatatgtt 559  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  28881980 taggttcgattatattgatttattgattttataatatgtt 28881941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 38853413 - 38853512
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||| || || | || || |||| |||||||||||||||||||||||| || |||||||||  || |||| ||||| || ||| ||||||    
T  38853413 gagaattgttgttctcatatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgccgaagttttgagtaaaccgacgg 38853512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 8574679 - 8574721
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||| ||||||||||||||||||||| | |||||||||||    
T  8574679 cggtagtaaactgccgaagtttttaggaaactggcggcagtta 8574721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 315 - 353
Target Start/End: Original strand, 8574727 - 8574765
Alignment:
Q  315 cgaggagaatgttataagaacagaactgcataggagttt 353  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  8574727 cgaggaaaatgttataagaatagaactgcataggagttt 8574765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 30705138 - 30705176
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    |||||||||||||||||||||| || |||||||||||||    
T  30705138 agttaactgccgaagtttttagtaaaccggcggcagtta 30705176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 586
Target Start/End: Original strand, 1398903 - 1398975
Alignment:
Q  514 attatataggttcgattatat-tgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||  | ||| ||||||||||||||| ||  ||||||||| |||||||| ||||||    
T  1398903 attatataggttcgattatataggttttattgattttatgatat-ttatgatagtttatgttagaattgttaga 1398975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 13563596 - 13563629
Alignment:
Q  142 aaagttgagaattgctgttcccacatgttgtttg 175  Q
    |||| |||||||||||||||||||||||||||||    
T  13563596 aaagatgagaattgctgttcccacatgttgtttg 13563629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 261
Target Start/End: Original strand, 14279788 - 14279897
Alignment:
Q  153 ttgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtcc-ctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    ||||||||||||||| | || || |||| |||||| |||||  |||  ||||  || ||||||||||  |||||||||||||||||||| || ||| |||    
T  14279788 ttgctgttcccacatatagtatggctgtgccacaccagtaatttacgcaaataccctctcggcagttaactaccgaggtttttaggaaaccggcggcagt 14279887  T
Q  252 taactgccga 261  Q
    ||||| ||||    
T  14279888 taactcccga 14279897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 377
Target Start/End: Complemental strand, 20200122 - 20200089
Alignment:
Q  344 ataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||||||||||||||| ||||    
T  20200122 ataggagtttccaaaactccattgttgcggtttt 20200089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 31239766 - 31239717
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcg 372  Q
    ||||||||||||| ||| | ||||||| ||||||||||||||||||||||    
T  31239766 tgttataagaacataacagacataggaatttccaaaactccattgttgcg 31239717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 41088222 - 41088267
Alignment:
Q  332 gaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||| ||| ||||||||||| |||||||||||||||| |||||||    
T  41088222 gaacaaaacagcataggagttaccaaaactccattgttacgttttt 41088267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 7757327 - 7757390
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||| |||||| |||||||| |||||||  |||| || ||||||||| ||||||    
T  7757327 agttaactgccgaag-ttttagaaatccggctgcagttaactgccgaggaaaacctcgctagtta 7757390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 11346009 - 11346072
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||||||| || ||||| || |||||||  |||| || ||||||||||||||||    
T  11346009 agttaactgccgaagtttt-agaaatccagctgcagttaactgccgaggaaaacctcggtagtta 11346072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 23190836 - 23190788
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgc 371  Q
    ||||||||||||||||| | |||| || |||||||||||||||||||||    
T  23190836 tgttataagaacagaacagacatacgaatttccaaaactccattgttgc 23190788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 146 - 447
Target Start/End: Original strand, 84479 - 84783
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || |    
T  84479 ttgagaattgctgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggaac-cggc 84577  T
Q  246 ggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaact 341  Q
    || ||||||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    ||||||||||||||||||||||||||||    
T  84578 ggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagaacagaact 84677  T
Q  342 gcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatac 441  Q
     |||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  84678 tcatatgagtttccaaaactccattgttgcatttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaac 84777  T
Q  442 aagtaa 447  Q
    ||||||    
T  84778 aagtaa 84783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 84848 - 84889
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatga 553  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  84848 cgattatataggttcgattatattgatttgttgattttatga 84889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 123)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 147 - 447
Target Start/End: Complemental strand, 46406764 - 46406461
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||| | ||||| ||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || ||    
T  46406764 tgagaattgctgttcccacatatagtttggctgtgtcacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggaac-cggcg 46406666  T
Q  247 gtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg 342  Q
    | ||||||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    ||||| ||||||||||||||||||||||     
T  46406665 gcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgagtagaatgttataagaacagaactt 46406566  T
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  46406565 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 46406466  T
Q  443 agtaa 447  Q
    |||||    
T  46406465 agtaa 46406461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 147 - 447
Target Start/End: Original strand, 49138514 - 49138817
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||| | ||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||  || ||    
T  49138514 tgagaattgctgttcccacatatagtttggctgtgccacatgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggaac-cggcg 49138612  T
Q  247 gtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg 342  Q
    | ||||||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||| |||||||     
T  49138613 gcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaactt 49138712  T
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  49138713 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 49138812  T
Q  443 agtaa 447  Q
    |||||    
T  49138813 agtaa 49138817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 147 - 447
Target Start/End: Original strand, 2950266 - 2950569
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||| | |||||  |||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || ||    
T  2950266 tgagaattgctgttcccacatatagtttggttgtgtcacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggaac-cggcg 2950364  T
Q  247 gtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg 342  Q
    | ||||| ||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    ||||||||||||||||||||||| ||||     
T  2950365 gcagttacctgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagaacataactt 2950464  T
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  2950465 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 2950564  T
Q  443 agtaa 447  Q
    |||||    
T  2950565 agtaa 2950569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 148 - 447
Target Start/End: Complemental strand, 34051485 - 34051183
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  || | |    
T  34051485 gagaattgctgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggaac-cggcag 34051387  T
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgc 343  Q
     ||||||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||| ||||||| |    
T  34051386 cagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactaccgaggagaatgttataagatcagaacttc 34051287  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  34051286 ataggagtttccaaaacttcattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaa 34051187  T
Q  444 gtaa 447  Q
    ||||    
T  34051186 gtaa 34051183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 249 - 447
Target Start/End: Original strand, 2645457 - 2645659
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||||||||| |||||||||||||   ||| || |||||||||| |||||    ||||||| |||||||||||||||||||||||    
T  2645457 agttaactgccgaagtttttaggaaaccggcggcagttaacagccgaggaaaacctcggcagttaactaccgaggaaaatgttataagaacagaactgca 2645556  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||    
T  2645557 taggagtttccaaaactccattgttgcgtttttaattatccaaggtgcaattttgagtcatttgaagtcattacaagccaattttaatcacaaaaacaag 2645656  T
Q  445 taa 447  Q
    |||    
T  2645657 taa 2645659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 258 - 447
Target Start/End: Complemental strand, 54392091 - 54391898
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcataggagttt 353  Q
    |||| ||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||| ||||||| |||||||||||    
T  54392091 ccgaggtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaacttcataggagttt 54391992  T
Q  354 ccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  54391991 ccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaagtaa 54391898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 512 - 632
Target Start/End: Original strand, 3493854 - 3493973
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3493854 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 3493953  T
Q  612 tagggttgaattgatcgccat 632  Q
    || ||||||||||||||||||    
T  3493954 ta-ggttgaattgatcgccat 3493973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 512 - 632
Target Start/End: Original strand, 3497548 - 3497667
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3497548 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 3497647  T
Q  612 tagggttgaattgatcgccat 632  Q
    || ||||||||||||||||||    
T  3497648 ta-ggttgaattgatcgccat 3497667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Complemental strand, 46406396 - 46406276
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  46406396 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 46406297  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  46406296 ta-ggttgaattgatcgccata 46406276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Original strand, 49138882 - 49139002
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  49138882 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 49138981  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  49138982 ta-ggttgaattgatcgccata 49139002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 513 - 633
Target Start/End: Complemental strand, 34051117 - 34050998
Alignment:
Q  513 gattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagtat 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34051117 gattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtgt 34051018  T
Q  613 agggttgaattgatcgccata 633  Q
    | |||||||||||||||||||    
T  34051017 a-ggttgaattgatcgccata 34050998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 249 - 447
Target Start/End: Original strand, 3493590 - 3493788
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||||| ||| |||||||||||||  |||  || |||||||||| |||||    ||||||| ||||||||||||||| |||||||    
T  3493590 agttaactgccgaagtttttaagaaaccggcggcagttaactgcagagaaaaacctcgggagttaactgccgaggaaaatgttataagaacataactgca 3493689  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    || |||||| ||||||||||||||||| |||||||||    ||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  3493690 taagagttttcaaaactccattgttgcatttttaatt----aaggtgcgattttgagtcatttgaagccattagaagccaatttcaatcacaaaaacaag 3493785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 249 - 447
Target Start/End: Original strand, 3497284 - 3497482
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||||| ||| |||||||||||||  |||  || |||||||||| |||||    ||||||| ||||||||||||||| |||||||    
T  3497284 agttaactgccgaagtttttaagaaaccggcggcagttaactgcagagaaaaacctcgggagttaactgccgaggaaaatgttataagaacataactgca 3497383  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    || |||||| ||||||||||||||||| |||||||||    ||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  3497384 taagagttttcaaaactccattgttgcatttttaatt----aaggtgcgattttgagtcatttgaagccattagaagccaatttcaatcacaaaaacaag 3497479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 512 - 633
Target Start/End: Complemental strand, 54391833 - 54391713
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  54391833 cgattatataggttcaattatattgatttgttgattttatgatatgttaggatagtttaggttagaattgttagaattgttaggatagtttaggttagtg 54391734  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  54391733 ta-ggttgaattgatcgccata 54391713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 147 - 313
Target Start/End: Original strand, 42900110 - 42900276
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||| ||| ||||||||||||||||||| |||| |||||||||||||||||||||||| || |||||||||  || | || ||||| || ||| || ||    
T  42900110 tgagagttgttgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatgcccttcggcagttaactgctgaagttttgagtaaaccggcg 42900209  T
Q  247 gtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    | ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||    
T  42900210 gcagttaactgccgaagtttttaagaatccggcggcagttaggtgacgagtaaaacctcggtagtta 42900276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 298 - 447
Target Start/End: Original strand, 2267106 - 2267259
Alignment:
Q  298 aaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgca 393  Q
    ||||||||||||||||    |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | ||||||||     
T  2267106 aaaacctcggtagttaactgccgaagaaaatgttataagaacagaacagcataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcg 2267205  T
Q  394 attttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    |||||||||||||||||| ||||  |||||||||| ||||| ||| ||||||||    
T  2267206 attttgagtcatttgaagtcattccaagccaatttcaatcacaaaaacaagtaa 2267259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 3953355 - 3953241
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||    
T  3953355 tgagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcg 3953256  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  3953255 gcagttaactgccga 3953241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 4002784 - 4002916
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||      
T  4002784 ccgaggaaaatgttataagaacagaacagcataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagtt 4002883  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||  ||||||| |||||||| ||| ||||||||    
T  4002884 attccaagccaa-tttaatcacaaaaacaagtaa 4002916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 46697634 - 46697758
Alignment:
Q  137 taaagaaagttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttag 236  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| ||||||||    
T  46697634 taaagtaagttgagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttag 46697733  T
Q  237 gaaatcgacggtagttaactgccga 261  Q
    | || || ||| |||||||||||||    
T  46697734 gcaaccggcggcagttaactgccga 46697758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 298 - 447
Target Start/End: Complemental strand, 50998677 - 50998524
Alignment:
Q  298 aaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgca 393  Q
    ||||||||||||||||    |||| || ||||||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||| | ||||||||     
T  50998677 aaaacctcggtagttaactgccgaagaaaatgttataagaacataacaacataggagtttccaaaactccattgttgcgtttttgattatccaaggtgcg 50998578  T
Q  394 attttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    |||||||||||||||||| ||||  |||||||||| ||||| ||| ||||||||    
T  50998577 attttgagtcatttgaagtcattccaagccaatttcaatcacaaaaacaagtaa 50998524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 152 - 259
Target Start/End: Complemental strand, 6745461 - 6745354
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||| |||    
T  6745461 attgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggcagt 6745362  T
Q  252 taactgcc 259  Q
    ||||||||    
T  6745361 taactgcc 6745354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 9426563 - 9426678
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||| || |    
T  9426563 ttgagaattgctgttcccacatgttgtttggttgtaccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 9426662  T
Q  246 ggtagttaactgccga 261  Q
    || |||||| ||||||    
T  9426663 ggcagttaaatgccga 9426678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 512 - 594
Target Start/End: Original strand, 2267314 - 2267396
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  2267314 cgattatataggttcgattatattgatttgttgattttatgatatgttagtatagtttaggttagaatggttagaattgttag 2267396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 8156441 - 8156555
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || | ||||||||||||||||||||||||||||| || ||    
T  8156441 tgagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaataccctttggcagtttgctaccgaggtttttaggaaaccggcg 8156540  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  8156541 gcagttaactgccga 8156555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 36136403 - 36136321
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  36136403 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatgattagaattgttag 36136321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 512 - 593
Target Start/End: Original strand, 52568033 - 52568114
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgtta 593  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52568033 cgattatacaggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgtta 52568114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 148 - 258
Target Start/End: Original strand, 41844083 - 41844193
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||| || |||    
T  41844083 gagaattgctcttcccacatgttgtttggctgtgccacacgagtaaaatacaaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggcgg 41844182  T
Q  248 tagttaactgc 258  Q
     ||||||||||    
T  41844183 cagttaactgc 41844193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 43478901 - 43478699
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-c 343  Q
    |||||||||| |||||||| || |||||||| |||||||  |||| || ||||| ||||||||||    ||||||| ||||||||||||||||||| | |    
T  43478901 agttaactgctgaagtttt-agaaatccggctgcagttaactgccgaggaaaacttcggtagttaactgccgaggaaaatgttataagaacagaacagac 43478803  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    |||||||||||||||||||||||||| |||||||   | | |||||||| ||||||||  |||| ||||||||  |||||||||| ||||| ||| ||||    
T  43478802 ataggagtttccaaaactccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagccattccaagccaatttcaatcacaaaaacaa 43478703  T
Q  444 gtaa 447  Q
    ||||    
T  43478702 gtaa 43478699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 50998459 - 50998385
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50998459 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttaga 50998385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 54392163 - 54392054
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||| | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | || ||| |||    
T  54392163 attgctgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggacaccggcggcagt 54392064  T
Q  252 taactgccga 261  Q
    ||| ||||||    
T  54392063 taagtgccga 54392054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 512 - 592
Target Start/End: Original strand, 4002982 - 4003062
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgtt 592  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  4002982 cgattatataggtttgattatattgatttgttggttttatgatatgttaggatagtttaggttagaatggttagaattgtt 4003062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 35743720 - 35743608
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| |  |||||||||||||||||| |  |||||||||||| ||    
T  35743720 tgagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgccattcggcagtttgctaccgaag--tttaggaaatcggcg 35743623  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  35743622 gcagttaactgccga 35743608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 3502034 - 3501921
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| |||||||||||||||||||  ||| ||||||||||||||||| ||| || || |||||||||||||||||| |||||||||||| || |||    
T  3502034 gagaattgttgttcccacatgttgtttggttgtgccacacgagtaaaatacgaaactgcccttcggcagtttgctaccgaagtttttaggaaaccggcgg 3501935  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  3501934 cagttaactgccga 3501921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 30943127 - 30943236
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| ||| ||||||||||  |||||||||||||||  | ||| |||    
T  30943127 attgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatatccttcgacagtttgctattgaggtttttaggaaactggcggcagt 30943226  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  30943227 taactgccga 30943236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 2968065 - 2967949
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||| || ||    
T  2968065 tgagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagttttaaggaaaccggcg 2967966  T
Q  247 gtagttaactgccgaag 263  Q
    | ||||| |||||||||    
T  2967965 gcagttagctgccgaag 2967949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 514 - 594
Target Start/End: Original strand, 13894502 - 13894582
Alignment:
Q  514 attatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  13894502 attatataggttcgactatattgatttgttgtttttttgatatgttaggatagtttaggttagaatggttagaattgttag 13894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 263
Target Start/End: Complemental strand, 49144595 - 49144480
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| | || || ||||  ||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||| || |||    
T  49144595 gagaattgctgttcccacatatagtatggctgtgtcacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagttttaaggaaaccggcgg 49144496  T
Q  248 tagttaactgccgaag 263  Q
     |||||||||||||||    
T  49144495 cagttaactgccgaag 49144480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 50477112 - 50477227
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||| ||||||||||| |||||||||||| ||||| ||||||||||| ||||||||  ||| |||||||||||||| ||||||||| || || |    
T  50477112 ttgagaattgttgttcccacatcttgtttgactgtgccacatgagtaaaatacgaaaatgtcattcgacagtttgctaccgaagtttttaggcaaccggc 50477211  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  50477212 ggcagttaactgccga 50477227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 24700989 - 24701063
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  24700989 cgattatataggttcgattatattgatttgttgattttatgatatgttaggataatttaggttagaattgttaga 24701063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 51694148 - 51694222
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  51694148 cgattatataggttcgactatattgatttgttgattttatgatatgttaggatagtttaggttagaattgttaga 51694222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 2858095 - 2857982
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||| | || |||||||||||||||||| || ||||| ||| || |||    
T  2858095 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaacgcccttcggcagtttgctaccgaagtatttagtaaaccggcgg 2857996  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  2857995 cagttaactgccga 2857982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 527 - 594
Target Start/End: Original strand, 2645725 - 2645792
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  2645725 gattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaatggttag 2645792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 267 - 447
Target Start/End: Original strand, 49217114 - 49217294
Alignment:
Q  267 ttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcataggagtttccaaaactc 362  Q
    |||| |||||| | |||||||  ||||||| |||| |||||||||||    ||||||| |||||||||||||||||    ||||||||||||||||||||    
T  49217114 ttagaaatccgactgcagttaactgccaagaaaaatctcggtagttaattgccgaggaaaatgttataagaacaga----cataggagtttccaaaactc 49217209  T
Q  363 cattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||||| |||||||   | |||||||||||||||||||  |||| ||| ||||  || ||||||| ||||| ||| ||||||||    
T  49217210 cattgttacgttttttgatcttcaaggtgcaattttgagctatttcaagtcattccaaaccaatttcaatcacaaaaacaagtaa 49217294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 1835463 - 1835353
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||||||   ||  ||| ||||||||||||||||| |||||| |  |||||||||||||||||| |||||||||||| || |||    
T  1835463 gagaattgctgttcccacatgtt---tggttgtgccacacgagtaaaatacgaaaatgcctttcggcagtttgctaccgaagtttttaggaaaccggcgg 1835367  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  1835366 cagttaactgccga 1835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 272 - 447
Target Start/End: Original strand, 34691649 - 34691829
Alignment:
Q  272 aatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccatt 366  Q
    |||||||| |||||||  || | || ||||||||||||||||    ||||||| ||||||||||||||||||| | |||| |||||||||||||||||||    
T  34691649 aatccggctgcagttaactgtcgaggaaaacctcggtagttaactgccgaggaaaatgttataagaacagaacagacatatgagtttccaaaactccatt 34691748  T
Q  367 gttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||||||||| ||| | |  | ||| ||||||||  |||||||| ||||  |||| ||||| ||||| ||| ||||||||    
T  34691749 gttgcgtttttgattctccttgctgcgattttgagcaatttgaagtcattccaagctaatttcaatcacaaaaacaagtaa 34691829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 34691897 - 34691971
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| |||||||| ||||||    
T  34691897 cgattatataggttcgattatattgattttatgattttatgatatgttaggatagtttaagttagaattgttaga 34691971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 334 - 447
Target Start/End: Complemental strand, 36136580 - 36136468
Alignment:
Q  334 acagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatc 433  Q
    |||||||  |||||||||||||||||||| |||||||||||| || || | |||||||| |||||||||||||||||| ||||  |||||||||| ||||    
T  36136580 acagaacaacataggagtttccaaaactctattgttgcgtttata-ttatccaaggtgcgattttgagtcatttgaagtcattccaagccaatttcaatc 36136482  T
Q  434 ataaatacaagtaa 447  Q
    | ||| ||||||||    
T  36136481 acaaaaacaagtaa 36136468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 25191855 - 25191934
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccga 227  Q
    |||||||||| ||||||||||||||| | |||| ||||||||||||||||| |||||| || ||||||||||||||||||    
T  25191855 gagaattgctcttcccacatgttgttcggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccga 25191934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 265 - 445
Target Start/End: Complemental strand, 16484512 - 16484327
Alignment:
Q  265 ttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-cataggagtttccaaaa 359  Q
    |||||| |||||||| |||||||  |||| || ||||| |||| |||||    ||||||| ||||||||||||||||||| | |||||||||||| ||||    
T  16484512 ttttagtaatccggctgcagttaactgccgaggaaaacttcgggagttaactgccgaggaaaatgttataagaacagaacagacataggagtttcaaaaa 16484413  T
Q  360 ctccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagt 445  Q
    |||||||||| |||||||   | | |||||||| ||||||||  |||| ||| ||||  |||||||||| ||| | ||| ||||||    
T  16484412 ctccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagtcattccaagccaatttcaataacaaaaacaagt 16484327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 55205367 - 55205471
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||||||||||||| |||||||||||||||||||| ||| | |  ||||| ||||||||  |||||||| ||||  |||||||||||||||| ||| |||    
T  55205367 cataggagtttccataactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaagccaattttaatcacaaaaaca 55205466  T
Q  443 agtaa 447  Q
    |||||    
T  55205467 agtaa 55205471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 55267515 - 55267619
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    ||||||||||||||||||||||||||||||||||| ||| | |  ||||| ||||||||  |||||||| ||||  |||||||||| ||||| ||| |||    
T  55267515 cataggagtttccaaaactccattgttgcgtttttgattctccttggtgcgattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaaca 55267614  T
Q  443 agtaa 447  Q
    |||||    
T  55267615 agtaa 55267619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 2430083 - 2430001
Alignment:
Q  512 cgattatataggttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| |||| | |||  ||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  2430083 cgattatataggttcgat-atataggttttattgatttcatgatatgttaggatagtttaggttagaatggttagaattgttag 2430001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 542 - 593
Target Start/End: Original strand, 44223306 - 44223357
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgtta 593  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44223306 ttgattttatgatatgttaggatagtttaggttagaatggttagaattgtta 44223357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 24700791 - 24700925
Alignment:
Q  314 ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagc 412  Q
    ||||||| ||||||||||||||| |||   |||| ||||||||||||||||||||||||||||||  || | |||||||| ||||||||  |||| |||     
T  24700791 ccgaggaaaatgttataagaacataacacacatatgagtttccaaaactccattgttgcgttttttcttctccaaggtgcgattttgagcaatttcaagt 24700890  T
Q  413 cattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||  ||||||| || ||||| ||| ||||||||    
T  24700891 cattccaagccaaattcaatcaaaaaaacaagtaa 24700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 532 - 593
Target Start/End: Original strand, 55205571 - 55205632
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgtta 593  Q
    |||||||||  |||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  55205571 tattgattttatgatttaatgatatgttaggatagtttaggttagaatggttagaattgtta 55205632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 43478629 - 43478553
Alignment:
Q  512 cgattatatagg-ttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||| ||||||||||| |||||  |||||||||||||||||| ||||||||||||||||||| ||||||    
T  43478629 cgattatatagggttcgattatatagattttattgattttatgatatgttaggatagtttaggttagaattgttaga 43478553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 43571470 - 43571418
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  43571470 ttgattttatgatgtgttaggatagtttaggttagaatggttagaattgttag 43571418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 543 - 594
Target Start/End: Complemental strand, 7247645 - 7247594
Alignment:
Q  543 tgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  7247645 tgattttatgatatgttaggatagtttaggttggaatggttagaattgttag 7247594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 532 - 595
Target Start/End: Original strand, 55267716 - 55267779
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttagg 595  Q
    |||||||||  |||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  55267716 tattgattttatgatttaatgatatgttaggatagtttaggttagaatggttaaaattgttagg 55267779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 20374301 - 20374355
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  20374301 tgttataagaacagaacagacataggagtttccaaaactccattgttgcgttttt 20374355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 34045342 - 34045412
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  34045342 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 34045412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 46388892 - 46388962
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  46388892 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 46388962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 46702168 - 46702094
Alignment:
Q  144 agttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||||||| | || ||  ||| ||||||||||||||||||||||||||| || ||||||    
T  46702168 agttgagaattgctgttcccacatatagtatggttgtgccacacgagtaaaataccaaaatgtccttcagcagtt 46702094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 42321808 - 42321861
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  42321808 tgttatatgaacagaacagcataggagtttccaaaactccattgttacgttttt 42321861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 50457576 - 50457629
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  50457576 tgttatatgaacagaacagcataggagtttccaaaactccattgttacgttttt 50457629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 16444540 - 16444612
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||||| | || ||  ||| |||||||||||||||||||||||| || |||||||||    
T  16444540 ttgagaattgctgttcccacatatagtatggttgtgccacacgagtaaaataccaaaatgcccttcggcagtt 16444612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 41844440 - 41844372
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| || |||||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  41844440 cggtagtaaattgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 41844372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 343 - 447
Target Start/End: Original strand, 52567858 - 52567962
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    ||||||||||||||||||||||||||||||||||| ||| | |  ||||| ||| ||||  |||||||| ||||  ||| |||||| ||||| ||| |||    
T  52567858 cataggagtttccaaaactccattgttgcgttttttattctccttggtgcgattgtgagcaatttgaagtcattccaagtcaatttcaatcacaaaaaca 52567957  T
Q  443 agtaa 447  Q
    |||||    
T  52567958 agtaa 52567962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 323 - 377
Target Start/End: Original strand, 19440335 - 19440390
Alignment:
Q  323 atgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||||||||    
T  19440335 atgttataagaacagaacagacataagagtttccaaaactccattgttgcgttttt 19440390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 49611738 - 49611679
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  49611738 gattttattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 49611679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 434
Target Start/End: Original strand, 13894304 - 13894417
Alignment:
Q  322 aatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaa 420  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||  ||||||   | |  ||||||| ||||||||  |||| ||| ||||  ||    
T  13894304 aatgttataagaacagaacagacataggagtttccaaaactccattgttatgttttttgatctcgaaggtgcgattttgagctatttcaagtcattccaa 13894403  T
Q  421 gccaattttaatca 434  Q
    |||||||| |||||    
T  13894404 gccaatttcaatca 13894417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 29008819 - 29008904
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggttt 232  Q
    ||||||||| ||||||||||| | || || |||| ||||||||||||||||| |||||| || |||||||||  ||||||| ||||    
T  29008819 tgagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacgaaaatgcccttcggcagttaactaccgaagttt 29008904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 41579717 - 41579664
Alignment:
Q  325 gttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  41579717 gttataagaacagaactgacataggagtttccaaaactccattgctgcggtttt 41579664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 532 - 585
Target Start/End: Complemental strand, 41805449 - 41805396
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttag 585  Q
    |||||||||  |||||| |||||||||| |||||||||||||||||||||||||    
T  41805449 tattgattttatgatttaatgatatgttaggatagtttaggttagaatggttag 41805396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 447
Target Start/End: Complemental strand, 41805669 - 41805544
Alignment:
Q  323 atgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    |||||||||||||||||| | |||| ||||||| ||||||||||||||| |||||| ||| | |  ||||| ||||||||  |||||||| ||||  ||     
T  41805669 atgttataagaacagaacagacataagagtttctaaaactccattgttgtgttttttattctccttggtgcgattttgagcaatttgaagtcattccaaa 41805570  T
Q  422 ccaattttaatcataaatacaagtaa 447  Q
     |||||| ||||| ||| ||||||||    
T  41805569 tcaatttcaatcacaaaaacaagtaa 41805544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 2645399 - 2645503
Alignment:
Q  157 tgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagttaact 256  Q
    ||||||||||| | ||||| || | |||||| |||||| |||  ||||||||||||||||||  || |||| |||||||||||| || ||| |||||||     
T  2645399 tgttcccacatttggtttggctatgccacacaagtaaattacacaaatgtccctcggcagttaactgccgaagtttttaggaaaccggcggcagttaaca 2645498  T
Q  257 gccga 261  Q
    |||||    
T  2645499 gccga 2645503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 236
Target Start/End: Complemental strand, 42904321 - 42904233
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttag 236  Q
    |||||||||||||||||||| | || || |||| |||||| |||||||||| |||||| || |||||||||  || |||| ||||||||    
T  42904321 gagaattgctgttcccacatatagtatggctgtgccacaccagtaaaatacgaaaatgcccttcggcagttaactgccgaagtttttag 42904233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 1835390 - 1835335
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  1835390 ccgaagtttttaggaaaccggcggcagttaactgccgagaaaaacctcggtagtta 1835335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 3501958 - 3501903
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  3501958 ccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 3501903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 6745389 - 6745334
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  ||||||| ||||||||||||||||    
T  6745389 ccgaggtttttaggaaaccggcggcagttaactgccaaggaaaacctcggtagtta 6745334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 1835147 - 1835189
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  1835147 cggtagtaaactgccgaagtttttaggaaaccggcggcagtta 1835189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 258
Target Start/End: Original strand, 3493523 - 3493633
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| | ||||||||| | ||||| |||| ||||||||||||| |||  |||||| ||||| |||||  || |||| ||||||| |||| || |||    
T  3493523 gagaattgttcttcccacatttagtttggctgtgccacacgagtaaattacttaaatgttcctcgacagttaactgccgaagtttttaagaaaccggcgg 3493622  T
Q  248 tagttaactgc 258  Q
     ||||||||||    
T  3493623 cagttaactgc 3493633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 258
Target Start/End: Original strand, 3497217 - 3497327
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| | ||||||||| | ||||| |||| ||||||||||||| |||  |||||| ||||| |||||  || |||| ||||||| |||| || |||    
T  3497217 gagaattgttcttcccacatttagtttggctgtgccacacgagtaaattacttaaatgttcctcgacagttaactgccgaagtttttaagaaaccggcgg 3497316  T
Q  248 tagttaactgc 258  Q
     ||||||||||    
T  3497317 cagttaactgc 3497327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 19988394 - 19988464
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||| ||||| | ||||| |||| ||||||||||||| |||  ||||| ||||||||||||    
T  19988394 gagaattgctgttctcacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagtt 19988464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 34543274 - 34543204
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | ||||| |||| ||||| ||||||| |||  ||||||||||||||||||    
T  34543274 gagaattgttgttcccacatttggtttggctgtgccacatgagtaaattactcaaatgtccctcggcagtt 34543204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 41579509 - 41579455
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  || |||||||||||||| ||||||||||||||||||| ||||||    
T  41579509 tattgattttatgcttttatgatatgttaggatagtttaggttagaattgttaga 41579455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 46345223 - 46345277
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  ||||||||||||||||| | ||||||||||||||||| ||||||    
T  46345223 tattgattttatgattttatgatatgttagaatagtttaggttagaattgttaga 46345277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 447
Target Start/End: Original strand, 51693960 - 51694082
Alignment:
Q  326 ttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagcca 424  Q
    ||||||||| ||||| | ||||||||||| ||||||||||||||| | ||||| | | | |||||||| ||||||||  |||| ||| ||||  ||| ||    
T  51693960 ttataagaatagaacagacataggagttttcaaaactccattgttacattttttaatctccaaggtgcgattttgagctatttcaagtcattccaagtca 51694059  T
Q  425 attttaatcataaatacaagtaa 447  Q
    |||| ||||| ||| ||||||||    
T  51694060 atttcaatcacaaaaacaagtaa 51694082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 1835084 - 1835197
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| | || || |||| ||||||||||||  |||  ||||| || |||| |||   || |||| |||||||||||| || |||    
T  1835084 gagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcgg 1835183  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  1835184 cagttaactgccga 1835197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 2432936 - 2432883
Alignment:
Q  325 gttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||| ||||    
T  2432936 gttataagaatagaacagacataggagtttccaaaactccattgttgcggtttt 2432883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 533 - 586
Target Start/End: Original strand, 45099086 - 45099139
Alignment:
Q  533 attgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    ||||||||  |||||| |||||||||| ||||||||||||||||||| ||||||    
T  45099086 attgattttatgatttcatgatatgttaggatagtttaggttagaattgttaga 45099139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 46345017 - 46345070
Alignment:
Q  325 gttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||| ||||    
T  46345017 gttataagaacagaacagacataggagtttccaaaacttcattgttgcggtttt 46345070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 46412614 - 46412663
Alignment:
Q  323 atgttataagaacagaactgcataggagtttccaaaactccattgttgcg 372  Q
    |||||||| |||||||||  |||||||||||| |||||||||||||||||    
T  46412614 atgttatatgaacagaacaacataggagtttctaaaactccattgttgcg 46412663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 51017176 - 51017123
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||| |||  ||||||||||||||||||||||||||| |||||||    
T  51017176 tgttatatgaacaaaacaacataggagtttccaaaactccattgttacgttttt 51017123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 8475828 - 8475891
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||||||| || || |||||||||||||  |||| || ||||||||||||||||    
T  8475828 agttaactgccgaagtttt-agtaaaccggcggcagttaactgccgaggaaaacctcggtagtta 8475891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 30194424 - 30194376
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcg 372  Q
    ||||||| ||| |||||  ||||||||||||||||||||||||||||||    
T  30194424 tgttatatgaatagaacaacataggagtttccaaaactccattgttgcg 30194376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 324 - 447
Target Start/End: Original strand, 34645641 - 34645764
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||||||| ||| | |||||||||||||||| |||||||||| |||||||  || | | |||||| |||| |||  |||| ||||||||  ||||    
T  34645641 tgttataagaacataacagacataggagtttccaaa-ctccattgttacgtttttggttctcctaggtgcgatttggagcaatttcaagccattccaagc 34645739  T
Q  423 caattttaatcataaatacaagtaa 447  Q
    ||||||  |||| ||| ||||||||    
T  34645740 caatttcgatcacaaaaacaagtaa 34645764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 50998820 - 50998748
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| ||||||| ||| | ||||| |||| ||||||||||||| |||  ||||| ||||||||||||    
T  50998820 ttgagaattgttgttcccgcatttggtttggctgtgccacacgagtaaattactcaaatgcccctcggcagtt 50998748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 55385139 - 55385202
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||||||| || |||||||| |||||||  |||| || ||||||||||||||||    
T  55385139 agttaactgccgaagtttt-agaaatccggctgcagttaactgccgaggaaaacctcggtagtta 55385202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 2967988 - 2967933
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||| ||||| |||||||||||||| |||| |  ||||||||||||||||    
T  2967988 ccgaagttttaaggaaaccggcggcagttagctgccgaagaaaacctcggtagtta 2967933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 41844159 - 41844214
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||  || ||||||||||||||||    
T  41844159 ccgaagtttttaggaaaccggcggcagttaactgctgaggaaaacctcggtagtta 41844214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 447
Target Start/End: Complemental strand, 43571659 - 43571553
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgttttta--atttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaata 440  Q
    ||||||||||| ||||||||||||||| |||||||   ||| | | |||||| ||||||||  |||||||||||||  ||| |||||| ||||| | | |    
T  43571659 cataggagttttcaaaactccattgttacgttttttttattctcctaggtgcgattttgagcaatttgaagccattccaagtcaatttcaatcacagaaa 43571560  T
Q  441 caagtaa 447  Q
    |||||||    
T  43571559 caagtaa 43571553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 547 - 586
Target Start/End: Original strand, 44490630 - 44490669
Alignment:
Q  547 tttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  44490630 tttatgatatgttaggatagtttaggttagaattgttaga 44490669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 447
Target Start/End: Original strand, 45098905 - 45099008
Alignment:
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    |||||||||||||||||||||||||| |||||||   | | | | |||| ||||| ||  |||| ||||||||  ||| |||||||||||| ||| ||||    
T  45098905 ataggagtttccaaaactccattgttacgttttttgatctcctatgtgcgattttcagcaatttcaagccattccaagtcaattttaatcacaaaaacaa 45099004  T
Q  444 gtaa 447  Q
    ||||    
T  45099005 gtaa 45099008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 46697721 - 46697776
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| | |||||||||||||  |||| || ||||||||||||||||    
T  46697721 ccgaagtttttaggcaaccggcggcagttaactgccgaggaaaacctcggtagtta 46697776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 524 - 578
Target Start/End: Original strand, 49217360 - 49217415
Alignment:
Q  524 ttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaa 578  Q
    ||||||||||| |||||  |||||||||||||||||| |||||||||| |||||||    
T  49217360 ttcgattatatagattttattgattttatgatatgttgggatagtttatgttagaa 49217415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 50477190 - 50477245
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| | |||||||||||||  |||| || ||||||||||||||||    
T  50477190 ccgaagtttttaggcaaccggcggcagttaactgccgaggaaaacctcggtagtta 50477245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 3948730 - 3948768
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  3948730 agttaactgccgaggtttttaggaaaccggcggcagtta 3948768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 12898825 - 12898755
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | ||||| || | ||||||||||||  |||| ||||| |||||| |||||    
T  12898825 gagaattgctgttcccacatttggtttggctatgccacacgagtaatttacccaaatgcccctcgacagtt 12898755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 30947725 - 30947687
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  30947725 agttaactgccgaggtttttaggaaaccggcggcagtta 30947687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 35743416 - 35743458
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||| || |||||||||||||||||| |||||||||||||    
T  35743416 cggtagtaaattgccgaagtttttaggaaaccggcggcagtta 35743458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 50481522 - 50481452
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | || ||  ||| |||||| |||||||||| |||||| || |||||||||    
T  50481522 gagaattgctgttcccacatatagtatggttgtgccacaccagtaaaatacgaaaatgcccttcggcagtt 50481452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 7247853 - 7247800
Alignment:
Q  325 gttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||| ||| | ||||| |||||||||||||||||||||||| ||||    
T  7247853 gttataagaacataacagacatagtagtttccaaaactccattgttgcggtttt 7247800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 11095224 - 11095143
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccga 227  Q
    |||||||||| ||||||||| | | ||||| || | ||||||||||||| |||  ||||| |||||||||||| ||| ||||    
T  11095224 ttgagaattgttgttcccacgtttggtttggctatgccacacgagtaaattactcaaatgcccctcggcagttagctgccga 11095143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 11377334 - 11377379
Alignment:
Q  332 gaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||| ||| ||||||||||||||||||||| |||||| |||||||    
T  11377334 gaacaaaacagcataggagtttccaaaactcaattgttacgttttt 11377379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 398
Target Start/End: Original strand, 27096093 - 27096142
Alignment:
Q  349 agtttccaaaactccattgttgcgtttttaatttttcaaggtgcaatttt 398  Q
    ||||||||||||||||||||||||||||| || || | |||||| |||||    
T  27096093 agtttccaaaactccattgttgcgtttttgatattcctaggtgcgatttt 27096142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 369
Target Start/End: Complemental strand, 44929347 - 44929310
Alignment:
Q  332 gaacagaactgcataggagtttccaaaactccattgtt 369  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  44929347 gaacaaaacagcataggagtttccaaaactccattgtt 44929310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 54386067 - 54386124
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatg 205  Q
    |||||||||| ||| ||||| | || || |||| ||||||||||||||||||||||||    
T  54386067 gagaattgctcttctcacatatagtatggctgtgccacacgagtaaaataccaaaatg 54386124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 2647771 - 2647707
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| |||| |  |||||||| |||||||  |||| || ||||||||||||||||    
T  2647771 agttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagtta 2647707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 309
Target Start/End: Complemental strand, 4004878 - 4004815
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggta 309  Q
    |||||||||| |||||||||||| || |||||||| |||||||  |||| || ||||||||||||    
T  4004878 cggtagttaattgccgaagtttt-agaaatccggctgcagttaactgccgaggaaaacctcggta 4004815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 14633354 - 14633306
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcg 372  Q
    ||||||| ||||| |||  ||||||||||||||||||||||| ||||||    
T  14633354 tgttatatgaacaaaacaacataggagtttccaaaactccatagttgcg 14633306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 28817141 - 28817069
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| ||||||||| | | ||||| |||| ||||||||||||| |||  ||||  ||||||||||||    
T  28817141 ttgagaattgatgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagtt 28817069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 43476193 - 43476257
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||||||    |||||||| |||||||  |||| || ||||||||||||||||    
T  43476193 agttaactgccgaagttttagaaaatccggctgcagttaactgccgaggaaaacctcggtagtta 43476257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 148 - 447
Target Start/End: Complemental strand, 27641890 - 27641588
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||  || |||    
T  27641890 gagaattgctgttcccacatgttgtttggctgtgccacactagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggaac-cggcgg 27641792  T
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagttacc----gaggagaatgttataagaacagaactgc 343  Q
     ||||||||||||||||||||||||  ||||||||||||  ||| | || |||||||||||||||| |    |||||||||||||||||||||||||| |    
T  27641791 cagttaactgccgaagtttttaggacaccggcggcagttcagtgtcgaggaaaacctcggtagttaactgctgaggagaatgttataagaacagaacttc 27641692  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  27641691 ataggagtttccgaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaa 27641592  T
Q  444 gtaa 447  Q
    ||||    
T  27641591 gtaa 27641588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 147 - 447
Target Start/End: Complemental strand, 11694200 - 11693897
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||  || ||    
T  11694200 tgagaattgctgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccaaggtttttaggaac-cggcg 11694102  T
Q  247 gtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg 342  Q
    | | ||||||||||||||||||||||   ||||||||||||  |||| || ||||||||||||||||    |||||||||||||||||||| |||||||     
T  11694101 gcaattaactgccgaagtttttaggacatcggcggcagttaattgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaactt 11694002  T
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  11694001 cataggagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaaca 11693902  T
Q  443 agtaa 447  Q
    |||||    
T  11693901 agtaa 11693897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 148 - 447
Target Start/End: Complemental strand, 6207232 - 6206930
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||| ||||||||| | |||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||||||||||||  || |||    
T  6207232 gagaattgcttttcccacatatagtttgactgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctatcgaggtttttaggaac-cggcgg 6207134  T
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgc 343  Q
     ||||||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||| ||||||| |    
T  6207133 cagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaacttc 6207034  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  6207033 ataggagtttccaaaacttcattgatgcgtttttaattttttaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaa 6206934  T
Q  444 gtaa 447  Q
    ||||    
T  6206933 gtaa 6206930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 148 - 447
Target Start/End: Original strand, 32691085 - 32691388
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | |||||  ||| |||||| |||||| |||  ||||| |||||| |||||  || |||| ||||||||||||||| |||    
T  32691085 gagaattgttgttcccacatttggtttggttgtgccacacaagtaaattacgcaaatgcccctcgacagttaactgccgaagtttttaggaaatcggcgg 32691184  T
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcgg----tagttaccgaggagaatgttataagaacagaactgc 343  Q
     ||||||||||||||||||||||||| |||||||||||||   ||| || ||||||||||    ||  ||||||||| ||||||||||||||||||||||    
T  32691185 cagttaactgccgaagtttttaggaagccggcggcagttaacagccgaggaaaacctcggcaattaactaccgaggaaaatgttataagaacagaactgc 32691284  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||| ||| ||||| |||||||||||||||| ||| ||||    
T  32691285 ataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgagtcattttaagtcattacaagccaattttaatcacaaaaacaa 32691384  T
Q  444 gtaa 447  Q
    ||||    
T  32691385 gtaa 32691388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Complemental strand, 6206865 - 6206745
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6206865 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 6206766  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  6206765 ta-ggttgaattgatcgccata 6206745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Complemental strand, 11693832 - 11693712
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11693832 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 11693733  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  11693732 ta-ggttgaattgatcgccata 11693712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 1608256 - 1608365
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||| || ||| |||    
T  1608256 attgctgttcccacatgttgtttggctgtgccacacgtgtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggcagt 1608355  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  1608356 taactgccga 1608365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 18351782 - 18351669
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||| | |||||||||| ||  ||    
T  18351782 gagaattgctgttctcacatgttgtttggctgtgccacacgagtaaaataccaaaatgttcttcggcagtttgctaccgaagattttaggaaaccggtgg 18351683  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  18351682 cagttaactgccga 18351669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 27616648 - 27616764
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||||||||||| ||||| |||||| || ||    
T  27616648 tgagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagttttaaggaaaccggcg 27616747  T
Q  247 gtagttaactgccgaag 263  Q
    | |||||||||||||||    
T  27616748 gcagttaactgccgaag 27616764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 524 - 599
Target Start/End: Original strand, 32691451 - 32691526
Alignment:
Q  524 ttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatag 599  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  32691451 ttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttagtatag 32691526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 524 - 594
Target Start/End: Original strand, 13616509 - 13616579
Alignment:
Q  524 ttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13616509 ttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 13616579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 30825983 - 30826097
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||  | |||||||||||||||||| ||||||||| || || ||    
T  30825983 tgagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatataaaaatgctcttcggcagtttgctaccgaagtttttaggcaaccggcg 30826082  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  30826083 gcagttaactgccga 30826097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 326 - 446
Target Start/End: Complemental strand, 14124710 - 14124589
Alignment:
Q  326 ttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagcca 424  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| ||||||| ||| | |||||||| ||||| || ||||| ||||||||  ||||||    
T  14124710 ttataagaacagaactgacataggagtttccaaaactctattgttacgttttttattctccaaggtgcgattttcagccatttcaagccattccaagcca 14124611  T
Q  425 attttaatcataaatacaagta 446  Q
    |||| ||||| ||| |||||||    
T  14124610 atttcaatcacaaaaacaagta 14124589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 512 - 576
Target Start/End: Complemental strand, 27641523 - 27641459
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttag 576  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27641523 cgattatataggtttgattatattgatttgttgattttatgatatgttaggatagtttaggttag 27641459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 26712360 - 26712249
Alignment:
Q  150 gaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggta 249  Q
    |||||| ||||||||||||||||||  |||| ||||||||||||||||  |||||  || |||||||||||||| ||| |||||||||||| || ||| |    
T  26712360 gaattgatgttcccacatgttgtttagctgtgccacacgagtaaaatatgaaaatacccttcggcagtttgctaacgaagtttttaggaaaccggcggca 26712261  T
Q  250 gttaactgccga 261  Q
    ||||||||||||    
T  26712260 gttaactgccga 26712249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 323 - 447
Target Start/End: Original strand, 13616319 - 13616444
Alignment:
Q  323 atgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| | |  ||||| |||| ||   |||||||||||||  |||    
T  13616319 atgttataagaacagaacagacataggagtttccaaaactccattgttgcgttttttattatccttggtgcgatttcgaacaatttgaagccattccaag 13616418  T
Q  422 ccaattttaatcataaatacaagtaa 447  Q
    ||||||| ||||| ||| ||||||||    
T  13616419 ccaatttcaatcacaaaaacaagtaa 13616444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 17597663 - 17597550
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | |||| ||||||||||||||||||| |||  |||||| | |||| ||||||||  ||| |||||||||||| || |||    
T  17597663 gagaattgatgttcccacatatagtttaactgtaccacacgagtaaattactcaaatgttcttcggtagtttgctgtcgaagtttttaggaaaccggcgg 17597564  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  17597563 cagttaactgccga 17597550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 249 - 377
Target Start/End: Complemental strand, 29076394 - 29076263
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-c 343  Q
    ||||||||| ||||||||| || |||||||| |||||||  |||  || ||||||||||||||||    ||||||| ||||||||||||||| ||| | |    
T  29076394 agttaactgtcgaagtttt-agaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga-aatgttataagaacaaaacagac 29076297  T
Q  344 ataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||||||||||||| |||||||    
T  29076296 ataggagtttccaaaactccattgttacgttttt 29076263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 249 - 377
Target Start/End: Complemental strand, 29109927 - 29109796
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-c 343  Q
    ||||||||| ||||||||| || |||||||| |||||||  |||  || ||||||||||||||||    ||||||| ||||||||||||||| ||| | |    
T  29109927 agttaactgtcgaagtttt-agaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga-aatgttataagaacaaaacagac 29109830  T
Q  344 ataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||||||||||||| |||||||    
T  29109829 ataggagtttccaaaactccattgttacgttttt 29109796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 249 - 377
Target Start/End: Complemental strand, 29111367 - 29111236
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-c 343  Q
    ||||||||| ||||||||| || |||||||| |||||||  |||  || ||||||||||||||||    ||||||| ||||||||||||||| ||| | |    
T  29111367 agttaactgtcgaagtttt-agaaatccggctgcagttaactgctgaggaaaacctcggtagttaactgccgagga-aatgttataagaacaaaacagac 29111270  T
Q  344 ataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||||||||||||| |||||||    
T  29111269 ataggagtttccaaaactccattgttacgttttt 29111236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 447
Target Start/End: Original strand, 35019617 - 35019780
Alignment:
Q  289 gtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttt 383  Q
    |||||||| ||||||||||||||||    ||||  |  ||||||||| |||| ||| | ||| ||||||||||||||||||||||||||||||| ||| |    
T  35019617 gtgccaagaaaaacctcggtagttaactgccgaaaaatatgttataataacataacagacatcggagtttccaaaactccattgttgcgtttttgattct 35019716  T
Q  384 tcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
     |  ||||| ||||||||  |||||||| ||||  |||||||||| ||||| ||| ||||||||    
T  35019717 ccttggtgcgattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaacaagtaa 35019780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 434
Target Start/End: Original strand, 34801603 - 34801694
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatca 434  Q
    ||||||||||| ||||||||||||||| ||||||| ||| | | |||||| ||||||||  |||||||||||||  |||||||||| |||||    
T  34801603 cataggagttttcaaaactccattgttacgttttttattctcctaggtgcgattttgagcaatttgaagccattccaagccaatttcaatca 34801694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 532 - 595
Target Start/End: Original strand, 35019874 - 35019937
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttagg 595  Q
    |||||||||  |||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  35019874 tattgattttatgatttaatgatatgttaggatagtttaggttagaatggttataattgttagg 35019937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 314 - 447
Target Start/End: Complemental strand, 29068269 - 29068135
Alignment:
Q  314 ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagc 412  Q
    ||||||| ||||||||||||||| |||   |||||||||||| |||||||||||||| |||||||   | | |||||||| ||||||||   ||| ||||    
T  29068269 ccgaggaaaatgttataagaacaaaacaaacataggagtttctaaaactccattgttacgttttttgatctccaaggtgcgattttgagctctttcaagc 29068170  T
Q  413 cattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||  |||||||||| ||||| ||| ||||||||    
T  29068169 catttcaagccaatttcaatcacaaaaacaagtaa 29068135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 314 - 447
Target Start/End: Complemental strand, 29083516 - 29083382
Alignment:
Q  314 ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagc 412  Q
    ||||||| ||||||||||||||| |||   |||||||||||| |||||||||||||| |||||||   | | |||||||| ||||||||   ||| ||||    
T  29083516 ccgaggaaaatgttataagaacaaaacaaacataggagtttctaaaactccattgttacgttttttgatctccaaggtgcgattttgagctctttcaagc 29083417  T
Q  413 cattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||  |||||||||| ||||| ||| ||||||||    
T  29083416 catttcaagccaatttcaatcacaaaaacaagtaa 29083382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 13382626 - 13382694
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  13382626 cggtagtaaactgacgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 13382694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 26712045 - 26712113
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| |||||||||||||||||||||  ||||||||||||  |||| || ||||||||||||||||    
T  26712045 cggtagtaaactgccgaagtttttaggaaatcggcggcagttaactgccgaggaaaacctcggtagtta 26712113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 32026247 - 32026291
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  32026247 ttgattttatgatatgttaggatagtttaggttagaatggttaga 32026291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 13382563 - 13382676
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | ||||| |||| ||||||||||||| |||  |||||||| |||| |||   ||  ||| |||||||||||| || |||    
T  13382563 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgtccttcggtagtaaactgacgaagtttttaggaaaccggcgg 13382662  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  13382663 cagttaactgccga 13382676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 326 - 377
Target Start/End: Complemental strand, 17126964 - 17126912
Alignment:
Q  326 ttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  17126964 ttataagaacagaacagacataggagtttccaaaactccatcgttgcgttttt 17126912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 28249886 - 28249950
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||| |||||||||||||||| | |||||||||||||  |||| || ||||||||||||||||    
T  28249886 agttaaatgccgaagtttttagggaaccggcggcagttaactgccgaggaaaacctcggtagtta 28249950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 11688048 - 11688118
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| |||||||||||   || || |||| |||||||||||||||||||||||| || |||||||||    
T  11688048 gagaattgttgttcccacatacagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 11688118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 26712285 - 26712231
Alignment:
Q  259 cgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  26712285 cgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 26712231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 13164397 - 13164316
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccga 227  Q
    |||||||||| ||||||||||| | ||||| || | ||||||||||||| |||  ||||| ||||||||||||  |||||||    
T  13164397 ttgagaattgttgttcccacatttagtttggctatgccacacgagtaaattactcaaatgcccctcggcagttaactaccga 13164316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 584
Target Start/End: Complemental strand, 29068069 - 29068008
Alignment:
Q  524 ttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggtta 584  Q
    ||||||||||| |||||  || ||||||||||||||| ||||||||||||||||||| ||||    
T  29068069 ttcgattatatagattttattaattttatgatatgttaggatagtttaggttagaattgtta 29068008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 584
Target Start/End: Complemental strand, 29083315 - 29083254
Alignment:
Q  524 ttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggtta 584  Q
    ||||||||||| |||||  || ||||||||||||||| ||||||||||||||||||| ||||    
T  29083315 ttcgattatatagattttattaattttatgatatgttaggatagtttaggttagaattgtta 29083254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 584
Target Start/End: Complemental strand, 29109658 - 29109597
Alignment:
Q  524 ttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggtta 584  Q
    ||||||||||| |||||  || ||||||||||||||| ||||||||||||||||||| ||||    
T  29109658 ttcgattatatagattttattaattttatgatatgttaggatagtttaggttagaattgtta 29109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 589 - 633
Target Start/End: Complemental strand, 27641479 - 27641436
Alignment:
Q  589 tgttaggatagtttaggttagtatagggttgaattgatcgccata 633  Q
    |||||||||||||||||||||| || |||||||||||||||||||    
T  27641479 tgttaggatagtttaggttagtgta-ggttgaattgatcgccata 27641436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 34801799 - 34801843
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||    
T  34801799 ttgattttatgatatgttaggatactttaggttagaattgttaga 34801843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 543 - 586
Target Start/End: Complemental strand, 13404394 - 13404351
Alignment:
Q  543 tgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||    
T  13404394 tgattttatgatatgttaggatagtttaggttaaaattgttaga 13404351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 447
Target Start/End: Complemental strand, 13404625 - 13404502
Alignment:
Q  325 gttataagaacagaac-tgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagcc 423  Q
    |||||||||| ||||| | |||| ||||||||||||||||||||||||| |||| ||| |   ||||||||||||  | ||||  ||| ||||  || ||    
T  13404625 gttataagaatagaacatacataagagtttccaaaactccattgttgcggttttcattctcttaggtgcaattttctgccattccaagtcattccaatcc 13404526  T
Q  424 aattttaatcataaatacaagtaa 447  Q
    ||||| ||||| ||| ||||||||    
T  13404525 aatttaaatcacaaaaacaagtaa 13404502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 29076117 - 29076058
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||| |||||||||  |||||||||||||||||   ||||||||||||||||| ||||||    
T  29076117 gattttattgattttatgattttatgatatgttattatagtttaggttagaattgttaga 29076058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 29111089 - 29111030
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||| |||||||||  |||||||||||||||||   ||||||||||||||||| ||||||    
T  29111089 gattttattgattttatgattttatgatatgttattatagtttaggttagaattgttaga 29111030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 371
Target Start/End: Original strand, 5972079 - 5972128
Alignment:
Q  324 tgttataagaacagaactgca--taggagtttccaaaactccattgttgc 371  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  5972079 tgttataagaacagaacggcacataggaatttccaaaactccattgttgc 5972128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 6761010 - 6760964
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaa 194  Q
    |||||||||||||||||||| | ||||| |||| |||||||||||||    
T  6761010 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaa 6760964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 8712055 - 8712006
Alignment:
Q  324 tgttataagaacagaactgca--taggagtttccaaaactccattgttgc 371  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  8712055 tgttataagaacagaacggcacataggaatttccaaaactccattgttgc 8712006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 17597600 - 17597532
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||  ||| ||||||||||||||| |||||||||||||  |||| || ||||| |||| |||||    
T  17597600 cggtagtttgctgtcgaagtttttaggaaaccggcggcagttaactgccgaggaaaacttcgggagtta 17597532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 22305109 - 22305173
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| |||| |  |||||||| |||||||  |||| || ||||||||||||||||    
T  22305109 agttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagtta 22305173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 30829786 - 30829706
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggttt 232  Q
    |||||||||||||||| | || ||  ||| ||||||||||||||||| |||||| || ||| |||||  ||||||| ||||    
T  30829786 attgctgttcccacatatagtatggttgtgccacacgagtaaaatacgaaaatgcccttcgacagttaactaccgaagttt 30829706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 372
Target Start/End: Original strand, 32132968 - 32132996
Alignment:
Q  344 ataggagtttccaaaactccattgttgcg 372  Q
    |||||||||||||||||||||||||||||    
T  32132968 ataggagtttccaaaactccattgttgcg 32132996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 93)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 152 - 447
Target Start/End: Original strand, 3935768 - 3936066
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||| |||    
T  3935768 attgctgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgtccttcggcagtttgctaccgaggtttttaggaac-cggcggcagt 3935866  T
Q  252 taactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcatag 347  Q
    ||||||||||||||||||| |  || |||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||| ||||||| |||||    
T  3935867 taactgccgaagtttttagaacacccgcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaacttcatag 3935966  T
Q  348 gagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  3935967 gagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaagtaa 3936066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 148 - 447
Target Start/End: Complemental strand, 17426537 - 17426235
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | ||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||  || |||    
T  17426537 gagaattgttgttcccacatatagtttggctgtgccacacgagtaaaatacaaaaatgtccctcggcagtttgctactgaggtttttaggaac-cggcgg 17426439  T
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgc 343  Q
     ||||||||||||||||||||||||  ||||||||||||| ||||| || |||||||| |||||||    |||||||||||||||||||||||||||| |    
T  17426438 cagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcagtagttaactgccgaggagaatgttataagaacagaacttc 17426339  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  17426338 atatgagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaa 17426239  T
Q  444 gtaa 447  Q
    ||||    
T  17426238 gtaa 17426235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 152 - 447
Target Start/End: Complemental strand, 43984469 - 43984171
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||| | ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||| |||    
T  43984469 attgctgttcccacatatagtttggctgtgccacatgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaac-cggcggcagt 43984371  T
Q  252 taactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcatag 347  Q
    ||| || ||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||| ||||||||||||||| ||||||| |||||    
T  43984370 taattgtcgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaagagaatgttataagatcagaacttcatag 43984271  T
Q  348 gagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  43984270 gagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaagtaa 43984171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 245 - 447
Target Start/End: Complemental strand, 22003477 - 22003271
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaac 340  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    ||||||| |||||||||||||||||||    
T  22003477 cggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgttataagaacagaac 22003378  T
Q  341 tgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaata 440  Q
    |||||||||||||||||||||| ||||||||||||| |||| | |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||| |    
T  22003377 tgcataggagtttccaaaactcaattgttgcgttttaaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaa 22003278  T
Q  441 caagtaa 447  Q
    |||||||    
T  22003277 caagtaa 22003271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 148 - 313
Target Start/End: Complemental strand, 15835350 - 15835185
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||||||| |||||||  |||||||||||||||||||| |||||||||||| || |||    
T  15835350 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatatcaaaatgctcctcggcagtttgctaccgaagtttttaggaaaccggcgg 15835251  T
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
     ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  15835250 cagttaactgccgaagtttttaagaatccggcggcagttaggtgccgagtaaaacctcggtagtta 15835185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 146 - 346
Target Start/End: Original strand, 42499685 - 42499888
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||| || | |||||||||||||||||||||||||| || || |    
T  42499685 ttgagaattgctgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgccctttggcagtttgctaccgaggtttttagg-aaccggc 42499783  T
Q  246 ggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaact 341  Q
    || ||||||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||| |||||||    
T  42499784 ggcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaact 42499883  T
Q  342 gcata 346  Q
     ||||    
T  42499884 tcata 42499888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Original strand, 3936131 - 3936251
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3936131 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 3936230  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  3936231 ta-ggttgaattgatcgccata 3936251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Complemental strand, 17426170 - 17426050
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17426170 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 17426071  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  17426070 ta-ggttgaattgatcgccata 17426050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 512 - 632
Target Start/End: Complemental strand, 22003206 - 22003087
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22003206 cgattatataggtttgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 22003107  T
Q  612 tagggttgaattgatcgccat 632  Q
    || ||||||||||||||||||    
T  22003106 ta-ggttgaattgatcgccat 22003087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 512 - 633
Target Start/End: Complemental strand, 43984106 - 43983986
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43984106 cgattatataggttcgattataatgatttgttgattttatgatatattaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 43984007  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  43984006 ta-ggttgaattgatcgccata 43983986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 28477138 - 28476937
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||| || ||| |||| |||||||  |||| || ||||||||||||||||    || |||| |||||||||||||||| ||  ||    
T  28477138 agttaactgccgaagtttt-agaaatacggctgcagttaactgccgaggaaaacctcggtagttaactgccaaggaaaatgttataagaacagcacaaca 28477040  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||||||||||||||||||||||||||||| ||| | |||| ||| |||||||||||||||||||||||| |||||||||| ||||| ||| |||||    
T  28477039 taggagtttccaaaactccattgttgcgtttttgattatccaagttgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaacaag 28476940  T
Q  445 taa 447  Q
    |||    
T  28476939 taa 28476937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 524 - 632
Target Start/End: Complemental strand, 28476874 - 28476767
Alignment:
Q  524 ttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagtatagggttgaatt 623  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  28476874 ttcgattatattgatttgttgattttatgatattttaggatagtttaggctagaatagttagaattgttaggatagtttaggttagtata-ggttgaatt 28476776  T
Q  624 gatcgccat 632  Q
    |||||||||    
T  28476775 gatcgccat 28476767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 208943 - 209057
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||    
T  208943 tgaggattgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcg 209042  T
Q  247 gtagttaactgccga 261  Q
    |||||||||||||||    
T  209043 gtagttaactgccga 209057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 5351867 - 5351758
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || |||||||    
T  5351867 attgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggtagt 5351768  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  5351767 taactgccga 5351758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 298 - 412
Target Start/End: Complemental strand, 45435229 - 45435111
Alignment:
Q  298 aaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgca 393  Q
    ||||||||||||||||    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||     
T  45435229 aaaacctcggtagttaactgccgatgaaaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcg 45435130  T
Q  394 attttgagtcatttgaagc 412  Q
    |||||||||||||||||||    
T  45435129 attttgagtcatttgaagc 45435111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 30493293 - 30493406
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| ||||||||| ||||| |||    
T  30493293 gagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaatcggcgg 30493392  T
Q  248 tagttaactgccga 261  Q
    ||||||||||||||    
T  30493393 tagttaactgccga 30493406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 157 - 261
Target Start/End: Original strand, 10619942 - 10620046
Alignment:
Q  157 tgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagttaact 256  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||| ||||||||    
T  10619942 tgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaatcggcggcagttaact 10620041  T
Q  257 gccga 261  Q
    |||||    
T  10620042 gccga 10620046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 16583400 - 16583318
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16583400 cgattatataggttcgactatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 16583318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 18000165 - 18000279
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    |||| ||||||||||||||||||||||||  ||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||    
T  18000165 tgagtattgctgttcccacatgttgtttggttgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcg 18000264  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  18000265 gcagttaactgccga 18000279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 41564632 - 41564518
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    |||| |||| ||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||    
T  41564632 tgagtattgttgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcg 41564533  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  41564532 gcagttaactgccga 41564518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 5355670 - 5355557
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| ||||||||| || || |||    
T  5355670 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaaccggcgg 5355571  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  5355570 cagttaactgccga 5355557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 17420501 - 17420615
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||||| || ||    
T  17420501 tgagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggcg 17420600  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  17420601 gcagttaactgccga 17420615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 44100938 - 44100824
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||||||  |||||  || |||||||||||||||||| |||||||||||| || ||    
T  44100938 tgagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatatgaaaatacccttcggcagtttgctaccgaagtttttaggaaaccggcg 44100839  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  44100838 gcagttaactgccga 44100824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 249 - 447
Target Start/End: Original strand, 39798444 - 39798646
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||  ||| | |||||||||||||  |||| || ||| |||||| |||||    ||||||| | |||||||||||||  ||  ||    
T  39798444 agttaactgccgaagtttgaaggcaaccggcggcagttaactgccgaggaaatcctcgggagttaactgccgaggaaattgttataagaacaacacaaca 39798543  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||||| ||||||||||||||||||||||| | | |  ||| ||| ||||||| |||||| ||||||||| |||||||||| ||||| ||| |||||    
T  39798544 taggagttttcaaaactccattgttgcgtttttgagtatcaaagttgcgattttgaatcattttaagccattacaagccaatttcaatcacaaaaacaag 39798643  T
Q  445 taa 447  Q
    |||    
T  39798644 taa 39798646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 3943263 - 3943060
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-c 343  Q
    ||||||||||||||||||| || |||||||| |||||||  |||| || ||||||||||||||||    ||||||| | ||||||||||||||||| | |    
T  3943263 agttaactgccgaagtttt-agaaatccggctgcagttaactgccgagaaaaacctcggtagttaactgccgaggaaattgttataagaacagaacagac 3943165  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttc-aaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||||||||| ||||||||||||||| |||||||  | | || ||||||| ||||||||  |||| ||| ||||  |||||||||| ||||| ||| |||    
T  3943164 ataggagttttcaaaactccattgttacgttttttttatctcaaaggtgcgattttgagctatttcaagtcattccaagccaatttcaatcacaaaaaca 3943065  T
Q  443 agtaa 447  Q
    |||||    
T  3943064 agtaa 3943060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 7267583 - 7267472
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||||||| ||||||  | |||||||||||||||||| ||||||||| || || |||    
T  7267583 gagaattgctgtttccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgctcatcggcagtttgctaccgaagtttttagggaaccggcgg 7267484  T
Q  248 tagttaactgcc 259  Q
     |||||||||||    
T  7267483 cagttaactgcc 7267472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 43536036 - 43536149
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||||||| |||||| |  ||| |||||||||||||| ||||||||| || |||||     
T  43536036 gagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaatacaaaaatgccgttcgacagtttgctaccgaagtttttaggcaaccgacga 43536135  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  43536136 cagttaactgccga 43536149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 35493148 - 35493065
Alignment:
Q  512 cgattatataggttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||||||||| | |||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35493148 cgattatataggttcgattatataggttttcttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 35493065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 38950661 - 38950553
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||| ||||||||||||||||||| ||||  | |||||||||||||| |||||| || |||||||||||||||||||| |||||||||| || ||  |||    
T  38950661 attgttgttcccacatgttgtttggctgtgtcgcacgagtaaaatacgaaaatgcccttcggcagtttgctaccgagg-ttttaggaaaccggcgacagt 38950563  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  38950562 taactgccga 38950553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 43493080 - 43492997
Alignment:
Q  512 cgattatataggttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||| ||||||||||| | |||  |||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  43493080 cgattatatagattcgattatataggttttattgattttatgatatgttaggataatttaggttagaatggttagaattgttag 43492997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 323 - 447
Target Start/End: Original strand, 41497551 - 41497676
Alignment:
Q  323 atgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| ||| | |  ||||| ||||||||  |||||||| ||||  |||    
T  41497551 atgttataagaacagaacagacataggattttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattcaaag 41497650  T
Q  422 ccaattttaatcataaatacaagtaa 447  Q
    ||||||| ||||| ||| | ||||||    
T  41497651 ccaatttcaatcacaaaaataagtaa 41497676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 8268538 - 8268486
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8268538 ttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 8268486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 21998148 - 21998261
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | |||||  ||| ||||||||||||| |||  ||||| || |||| |||||||| |||| |||||||||||| || |||    
T  21998148 gagaattgatgttcccacatatagtttggttgtgccacacgagtaaattactcaaatgcccttcggtagtttgctgccgaagtttttaggaaaccggcgg 21998247  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  21998248 cagttaactgccga 21998261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 343 - 447
Target Start/End: Complemental strand, 8268723 - 8268619
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||| |||||||||||||||||||||||||||||| ||| | | || ||| ||||||||  |||| ||||||||  |||||||||| ||||| ||| |||    
T  8268723 catacgagtttccaaaactccattgttgcgttttttattctcctagatgcgattttgagcaatttcaagccattctaagccaatttcaatcacaaaaaca 8268624  T
Q  443 agtaa 447  Q
    |||||    
T  8268623 agtaa 8268619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 434
Target Start/End: Complemental strand, 23409475 - 23409385
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatca 434  Q
    ||||||||||||||||||||||||||| ||||||| ||| | | |||||| ||||||||  |||||||||||||  |||||||||| |||||    
T  23409475 cataggagtttccaaaactccattgttacgttttt-attctcctaggtgcgattttgagcaatttgaagccattccaagccaatttcaatca 23409385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 43619283 - 43619168
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | ||||| |||| ||||||||||||| ||   ||||| || |||||||||  || |||| |||||||| ||| || |    
T  43619283 ttgagaattgctgttcccacatttggtttggctgtgccacacgagtaaattaatcaaatgcccttcggcagttaactgccgaagtttttagtaaaccggc 43619184  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  43619183 ggcagttaactgccga 43619168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 39793895 - 39793967
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||||| | || || |||| |||||||||||||||| ||||||| || |||||||||    
T  39793895 ttgagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatatcaaaatgcccttcggcagtt 39793967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 40676029 - 40676081
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  40676029 ttgattttatgatatcttaggatagtttaggttacaatggttagaattgttag 40676081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 3942972 - 3942913
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  3942972 gattttattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 3942913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 447
Target Start/End: Complemental strand, 16583590 - 16583464
Alignment:
Q  322 aatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaa 420  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| |  || ||||   | | |||||||| ||||||||  |||| ||| ||||  ||    
T  16583590 aatgttataagaacagaacagacataggagtttccaaaactccattatgacgctttttgatctccaaggtgcgattttgagctatttcaagtcattccaa 16583491  T
Q  421 gccaattttaatcataaatacaagtaa 447  Q
    |||||||| ||||| ||| ||||||||    
T  16583490 gccaatttcaatcacaaaaacaagtaa 16583464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 261
Target Start/End: Complemental strand, 22003537 - 22003427
Alignment:
Q  151 aattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtag 250  Q
    ||||||||||||||||| | ||||| |||| ||||||||||||| |||  ||||| || |||| |||   || |||| |||||||||||| || ||| ||    
T  22003537 aattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcag 22003438  T
Q  251 ttaactgccga 261  Q
    |||||||||||    
T  22003437 ttaactgccga 22003427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 30497088 - 30497018
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  30497088 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 30497018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 447
Target Start/End: Complemental strand, 34639309 - 34639183
Alignment:
Q  322 aatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaa 420  Q
    ||||||||||||||| ||| | ||||||||||||| ||||||||||||| | |||||   | | |||||||| ||||||||  |||| ||||||||  ||    
T  34639309 aatgttataagaacaaaacagacataggagtttcctaaactccattgttacattttttgatctccaaggtgcgattttgagctatttcaagccattccaa 34639210  T
Q  421 gccaattttaatcataaatacaagtaa 447  Q
    |||||||| ||| | ||| ||||||||    
T  34639209 gccaatttcaataacaaaaacaagtaa 34639183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 580 - 630
Target Start/End: Original strand, 39798763 - 39798812
Alignment:
Q  580 ggttagaattgttaggatagtttaggttagtatagggttgaattgatcgcc 630  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  39798763 ggttagaattgttaggatagtttaggttagta-aaggttgaattgatcgcc 39798812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 39800791 - 39800721
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | || || |||| |||||||||||||||| ||||||| || |||||||||    
T  39800791 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatatcaaaatgcccttcggcagtt 39800721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 42505901 - 42505831
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | || || |||| |||||||||||||||||||||||  || |||||||||    
T  42505901 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatacccttcggcagtt 42505831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 43978474 - 43978540
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  43978474 attgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 43978540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 20937831 - 20937920
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttag 236  Q
    ||||||||| ||||||||||| | ||||| |||| ||||||||||||| |||| ||||| || |||||||||  || |||| ||||||||    
T  20937831 tgagaattgttgttcccacatttggtttggctgtgccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttttag 20937920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 23786394 - 23786460
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    ||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||| ||||||    
T  23786394 cgattatataggttcgattatattga--------ttttatgatatgttaggatagtttaggttagaattgttaga 23786460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 324 - 444
Target Start/End: Complemental strand, 43493278 - 43493157
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||||||||||| | |||||||||||| |||||||||||||| | |||||   | | | |||||| ||||||||  |||| ||||||||  ||||    
T  43493278 tgttataagaacagaacagacataggagtttcaaaaactccattgttacattttttgatctcctaggtgcgattttgagcaatttcaagccattccaagc 43493179  T
Q  423 caattttaatcataaatacaag 444  Q
    |||||| ||||| ||| |||||    
T  43493178 caatttcaatcacaaaaacaag 43493157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 15831057 - 15831145
Alignment:
Q  144 agttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggttt 232  Q
    |||||||||||| ||||||||||| | || || |||| ||||||||||||||||| |||||  || |||||||||  ||||||| ||||    
T  15831057 agttgagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacgaaaattcccttcggcagttaactaccgaagttt 15831145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 586
Target Start/End: Complemental strand, 23409291 - 23409247
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||    
T  23409291 ttgattttatgatatgttaggatagtttaggttagaattgttaga 23409247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 39033032 - 39033100
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggca 215  Q
    ||||||||| ||||||||||| | ||||| |||||||||||||||||| |||  |||||| ||||||||    
T  39033032 tgagaattgttgttcccacatttggtttggctgtaccacacgagtaaattactcaaatgttcctcggca 39033100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 148 - 267
Target Start/End: Original strand, 3085971 - 3086089
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | |||||  ||| ||||||||||||| |||  |||||| |||||||||||  || |||| | |||||| ||  || | |    
T  3085971 gagaattgttgttcccacatttagtttggttgtgccacacgagtaaattactcaaatgttcctcggcagttaactgccgaag-ttttagaaatacggctg 3086069  T
Q  248 tagttaactgccgaagtttt 267  Q
    ||||||||||||||||||||    
T  3086070 tagttaactgccgaagtttt 3086089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 6978713 - 6978666
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgc 371  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  6978713 tgttatatgaacagaacagtataggagtttccaaaactccattgttgc 6978666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 151 - 218
Target Start/End: Complemental strand, 30803153 - 30803086
Alignment:
Q  151 aattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||| ||||||||||| | ||||| |||| ||||||||||||| |||  ||||||||||||||||||    
T  30803153 aattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgtccctcggcagtt 30803086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 44100861 - 44100806
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  44100861 ccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 44100806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 544 - 594
Target Start/End: Original strand, 2917981 - 2918031
Alignment:
Q  544 gattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||| |||||||||| ||||||||||||||||| | ||||||||||||||    
T  2917981 gatttcatgatatgttaggatagtttaggttagacttgttagaattgttag 2918031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Complemental strand, 3940864 - 3940798
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||| ||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  3940864 attgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 3940798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 10424774 - 10424844
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | ||||| |||| ||||||||||||| |||  ||||| ||||| ||||||    
T  10424774 gagaattgctgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccctcagcagtt 10424844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 377
Target Start/End: Original strand, 29090647 - 29090709
Alignment:
Q  316 gaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||| ||||||||||||||| ||| | |||| |||||||||||||||||||||| |||||||    
T  29090647 gaggaaaatgttataagaacaaaacagacatacgagtttccaaaactccattgttacgttttt 29090709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 44100699 - 44100741
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  44100699 cggtagtaaactgccgaagtttttaggaaaccggcggcagtta 44100741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 10358877 - 10358930
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||  ||||||||  ||||||||||||||||||||||||||| |||||||    
T  10358877 tgttatataaacagaacatcataggagtttccaaaactccattgttacgttttt 10358930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 23719426 - 23719479
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||| |||  ||||||||||||||||||||||||||| |||||||    
T  23719426 tgttatatgaacataacaacataggagtttccaaaactccattgttacgttttt 23719479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 24107098 - 24107151
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||| |||  ||||||||||||||||||||||||||| |||||||    
T  24107098 tgttatatgaacataacaacataggagtttccaaaactccattgttacgttttt 24107151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 28468641 - 28468706
Alignment:
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| |||||||||||||| | |||| |||||||||||||  |||| || ||||||||||||||||    
T  28468641 tagtaaactgccgaagtttgttggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 28468706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 34520054 - 34520099
Alignment:
Q  332 gaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||| |||||||||||||||||| ||||||||| |||||||    
T  34520054 gaacagaacagcataggagtttccaaaaatccattgttacgttttt 34520099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 37311043 - 37311096
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| |||||||||  ||||||||||||||||| ||||||||| |||||||    
T  37311043 tgttatatgaacagaacaacataggagtttccaaaaatccattgttacgttttt 37311096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 532 - 585
Target Start/End: Original strand, 41497760 - 41497813
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttag 585  Q
    |||||||||  ||||||||||||||||| ||||| ||||||||||||| |||||    
T  41497760 tattgattttatgattttatgatatgttaggataatttaggttagaattgttag 41497813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 586
Target Start/End: Original strand, 19470245 - 19470289
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||    
T  19470245 ttgattttatgatatgttaagatagtttaggttagaattgttaga 19470289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 23346782 - 23346845
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||||||| |  |||||||| |||||||  ||||||| ||||||||||||||||    
T  23346782 agttaactgccgaagtttt-ataaatccggctgcagttaactgccaaggaaaacctcggtagtta 23346845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 35493335 - 35493211
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||||||||||| | |||  |||||||||||||||||||||| |||||||   | | |||| ||  ||||||||  |||| ||| ||||  ||||    
T  35493335 tgttataagaacagaacagacatgagagtttccaaaactccattgttacgttttttgatctccaagttgtgattttgagcaatttcaagtcattccaagc 35493236  T
Q  423 caattttaatcataaatacaagtaa 447  Q
    |||||| ||||| ||| ||||||||    
T  35493235 caatttcaatcacaaaaacaagtaa 35493211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 7267507 - 7267452
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| | |||||||||||||  ||||||| |||| |||||||||||    
T  7267507 ccgaagtttttagggaaccggcggcagttaactgccaaggaaaatctcggtagtta 7267452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 17420578 - 17420633
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || ||| ||||||||||||    
T  17420578 ccgaagtttttaggaaaccggcggcagttaactgccgagaaaatcctcggtagtta 17420633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 18000242 - 18000297
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  18000242 ccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 18000297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 447
Target Start/End: Original strand, 23786202 - 23786329
Alignment:
Q  322 aatgttataagaacagaactg-cataggagtttccaaaactccattgttgc-gtttttaatttttcaaggtgcaattttgagtcatttgaagccattaga 419  Q
    ||||||||||||||| |||   ||||||||||| |||||||||||||||||  ||||| ||| | |  | ||| ||||||||  |||||||| ||||  |    
T  23786202 aatgttataagaacataacaaacataggagttttcaaaactccattgttgcatttttttattctccttgctgcgattttgagcaatttgaagtcattcca 23786301  T
Q  420 agccaattttaatcataaatacaagtaa 447  Q
    ||||||||| ||||| ||| ||||||||    
T  23786302 agccaatttcaatcacaaaaacaagtaa 23786329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 39951289 - 39951218
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||||||||||||||| | ||||| ||||  |||||||||||| |||  |||||  |||||||||||    
T  39951289 tgagaattgctgttcccacatttggtttggctgtgtcacacgagtaaattactcaaatgctcctcggcagtt 39951218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 41564555 - 41564500
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  41564555 ccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 41564500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 213524 - 213486
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  213524 agttaactgccgaggtttttaggaaaccggcggcagtta 213486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 10624537 - 10624499
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  10624537 agttaactgccgaggtttttaggaaaccggcggcagtta 10624499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 18003344 - 18003306
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  18003344 agttaactgccgaggtttttaggaaaccggcggcagtta 18003306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 21998211 - 21998253
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||  ||||||||||||||||||| |||||||||||||    
T  21998211 cggtagtttgctgccgaagtttttaggaaaccggcggcagtta 21998253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 29074141 - 29074071
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | |||||  ||| ||||||||||||| |||  ||||| ||||||||||||    
T  29074141 gagaattgttgttcccacatttggtttggttgtgccacacgagtaaattactcaaatgcccctcggcagtt 29074071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 43619214 - 43619176
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    |||||||||||||||||||||| || |||||||||||||    
T  43619214 agttaactgccgaagtttttagtaaaccggcggcagtta 43619176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 45428613 - 45428655
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||| |||||| |||||||||||||| |||||||||||||    
T  45428613 cggtagtaaactgctgaagtttttaggaaaccggcggcagtta 45428655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 372
Target Start/End: Complemental strand, 33405688 - 33405659
Alignment:
Q  343 cataggagtttccaaaactccattgttgcg 372  Q
    ||||||||||||||||||||||||||||||    
T  33405688 cataggagtttccaaaactccattgttgcg 33405659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 36509903 - 36509972
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagt 217  Q
    |||||||| ||||||||||| | ||||| || |  |||||||||||| |||  |||||||||||||||||    
T  36509903 gagaattgttgttcccacatttggtttggctatgtcacacgagtaaattactcaaatgtccctcggcagt 36509972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 43312666 - 43312779
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | ||||| ||||||||||||| ||   ||| |||||| || ||||||||   || |||| |||||||| ||| |  |||    
T  43312666 gagaattgttgttcccacatttggtttggctgtaccacacgaatattttacgaaaatgcccttcggcagtaaactgccgaagtttttagtaaaccagcgg 43312765  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  43312766 cagttaactgccga 43312779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 7190022 - 7189959
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||| |||||| |||||||| |||||||  |||| || ||||| ||||||||||    
T  7190022 agttaactgccgaag-ttttagaaatccggctgcagttaactgccgaggaaaacttcggtagtta 7189959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 427
Target Start/End: Original strand, 19470037 - 19470140
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    |||||||||||||||||   ||||||| ||||||||||||||||||| | |||||  |||| | |||||| ||||||||  |||| ||| ||||  ||||    
T  19470037 tgttataagaacagaacaaacataggaatttccaaaactccattgttacattttt-tttttcctaggtgcgattttgagcaatttcaagtcattccaagc 19470135  T
Q  423 caatt 427  Q
    |||||    
T  19470136 caatt 19470140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 20951186 - 20951114
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||||||||||||||||||  |  | |||| |||||| |||||| |||| ||||| || |||||||||    
T  20951186 ttgagaattgctgttcccacatgtgataaggctgtgccacaccagtaaattacctaaatgcccttcggcagtt 20951114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 28468573 - 28468625
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaatac 198  Q
    |||||||||| ||||||||| | | ||||| |||| |||||||||||||||||    
T  28468573 ttgagaattgttgttcccacgtatagtttggctgtgccacacgagtaaaatac 28468625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 43870192 - 43870129
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||| |||||| |||||| | |||||||| |||| || ||||| ||||||||||    
T  43870192 agttaactgccgaag-ttttagaaatccgactgcagttagctgccgaggaaaacttcggtagtta 43870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 91)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 152 - 447
Target Start/End: Original strand, 9365584 - 9365882
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    ||||||||||| |||| | ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  || ||| |||    
T  9365584 attgctgttcctacatatagtttggctgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaagtttttaggaac-cggcggcagt 9365682  T
Q  252 taactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcatag 347  Q
    |||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||| ||||||| |||||    
T  9365683 taactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaacttcatag 9365782  T
Q  348 gagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  9365783 gagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaagtaa 9365882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 148 - 447
Target Start/End: Complemental strand, 20566498 - 20566203
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | ||||| |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||    
T  20566498 gagaattgttgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgcccctcgacagtttgctaccgaggtttttaggaa-tcggcgg 20566400  T
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgc 343  Q
     ||||||||||||||||||||||||  ||||||||||||| |||||        ||||||||||||    |||||||||||||||||||||||||||| |    
T  20566399 cagttaactgccgaagtttttaggacaccggcggcagttaagtgccg-------cctcggtagttaactgccgaggagaatgttataagaacagaacttc 20566307  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  20566306 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaa 20566207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 147 - 361
Target Start/End: Original strand, 10098266 - 10098483
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||| ||||||||||| | ||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || || ||    
T  10098266 tgagaattgttgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttagg-aaccggcg 10098364  T
Q  247 gtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg 342  Q
    | ||||||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||| |||||||     
T  10098365 gcagttaactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaactt 10098464  T
Q  343 cataggagtttccaaaact 361  Q
    |||||||||||||||||||    
T  10098465 cataggagtttccaaaact 10098483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 138 - 313
Target Start/End: Complemental strand, 16636391 - 16636216
Alignment:
Q  138 aaagaaagttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttagg 237  Q
    ||||||||  |||||||| ||||||||||||||||||| |||| ||||||||||||| || ||||||| ||||| ||||||||||||||| |||||||||    
T  16636391 aaagaaagaagagaattgttgttcccacatgttgtttggctgtgccacacgagtaaagtatcaaaatgcccctcagcagtttgctaccgaagtttttagg 16636292  T
Q  238 aaatcgacggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  16636291 aaaccgacggcagttaactgccgaagtttttaagaatccggcggcagttaggtgccgagtaaaacctcggtagtta 16636216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 138 - 313
Target Start/End: Original strand, 17459247 - 17459422
Alignment:
Q  138 aaagaaagttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttagg 237  Q
    ||||||||  |||||||| ||||||||||||||||||| |||| ||||||||||||| || ||||||| ||||| ||||||||||||||| |||||||||    
T  17459247 aaagaaagaagagaattgttgttcccacatgttgtttggctgtgccacacgagtaaagtatcaaaatgcccctcagcagtttgctaccgaagtttttagg 17459346  T
Q  238 aaatcgacggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  17459347 aaaccgacggcagttaactgccgaagtttttaagaatccggcggcagttaggtgccgagtaaaacctcggtagtta 17459422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 138 - 313
Target Start/End: Complemental strand, 17593967 - 17593792
Alignment:
Q  138 aaagaaagttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttagg 237  Q
    ||||||||  |||||||| ||||||||||||||||||| |||| ||||||||||||| || ||||||| ||||| ||||||||||||||| |||||||||    
T  17593967 aaagaaagaagagaattgttgttcccacatgttgtttggctgtgccacacgagtaaagtatcaaaatgcccctcagcagtttgctaccgaagtttttagg 17593868  T
Q  238 aaatcgacggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  17593867 aaaccgacggcagttaactgccgaagtttttaagaatccggcggcagttaggtgccgagtaaaacctcggtagtta 17593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 148 - 313
Target Start/End: Complemental strand, 48407460 - 48407295
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||| |||| |||||| ||||||||||||||||||||| |||||||||||| || |||    
T  48407460 gagaattgctcttcccacatgttgtttggctgtgccacacgagtaatatactaaaatgcccctcggcagtttgctaccgaagtttttaggaaaccggcgg 48407361  T
Q  248 tagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
     ||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||    
T  48407360 cagttaactgccgaagtttttatgaatccggctgcagttaggtgccgagtaaaacctcggtagtta 48407295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Original strand, 9365947 - 9366067
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9365947 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 9366046  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  9366047 ta-ggttgaattgatcgccata 9366067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 512 - 632
Target Start/End: Original strand, 42504085 - 42504204
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42504085 cgattatataggttcgattatattgatttgttgattttatgatattttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 42504184  T
Q  612 tagggttgaattgatcgccat 632  Q
    || ||||||||||||||||||    
T  42504185 ta-ggttgaattgatcgccat 42504204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 513 - 633
Target Start/End: Complemental strand, 20566137 - 20566018
Alignment:
Q  513 gattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagtat 612  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |    
T  20566137 gattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttgggttagaatggttagaattgttaggatagtttaggttagtgt 20566038  T
Q  613 agggttgaattgatcgccata 633  Q
    | |||||||||||||||||||    
T  20566037 a-ggttgaattgatcgccata 20566018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 249 - 447
Target Start/End: Original strand, 15070356 - 15070558
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||  |||||  ||||||||||||  |||| || ||||||||||||||||    ||||||| |||||||||||||||  ||  ||    
T  15070356 agttaactgccgaagtttgaaggaaatcggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgttataagaacaacacaaca 15070455  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||||||||||||||||||||||||||||| | | | |||| ||| |||||||||||||||||| ||||| |||||||||| ||||| ||| |||||    
T  15070456 taggagtttccaaaactccattgttgcgtttttgagtatccaagttgcgattttgagtcatttgaagacattacaagccaatttcaatcacaaaaacaag 15070555  T
Q  445 taa 447  Q
    |||    
T  15070556 taa 15070558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 603713 - 603826
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||||| || |||    
T  603713 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggcgg 603812  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  603813 cagttaactgccga 603826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 17840961 - 17840760
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||| || |||||| | |||||||  |||| || ||||||||||||||||    ||||||| ||||||||||||||||||| |||    
T  17840961 agttaactgccgaagtttt-agaaatccgactgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgttataagaacagaacagca 17840863  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||| ||||||||| ||||||||||||||| ||| | |||||||| |||||  ||||||||||| ||||  || ||||||| ||||| ||| |||||    
T  17840862 taggagtctccaaaacttcattgttgcgtttttgattatccaaggtgcgattttaggtcatttgaagtcattccaatccaatttcaatcacaaaaacaag 17840763  T
Q  445 taa 447  Q
    |||    
T  17840762 taa 17840760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 43619643 - 43619752
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| || ||| |||    
T  43619643 attgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatatccttcggcagtttgctaccgaggtttttaggaaaccggcggcagt 43619742  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  43619743 taactgccga 43619752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 314 - 445
Target Start/End: Complemental strand, 34139731 - 34139600
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||| |    
T  34139731 ccgaggaaaatgttataagaacagaacatcataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaagtc 34139632  T
Q  414 attagaagccaattttaatcataaatacaagt 445  Q
    |||  |||||||||| ||||| ||| ||||||    
T  34139631 attccaagccaatttcaatcacaaaaacaagt 34139600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 17840695 - 17840613
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17840695 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 17840613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 10097850 - 10097963
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| || |||    
T  10097850 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaaccggcgg 10097949  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  10097950 cagttaactgccga 10097963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 314 - 447
Target Start/End: Complemental strand, 45258033 - 45257900
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||| | |||||||| |||||||||||||||||| |    
T  45258033 ccgaggaaaatgttataagaacaaaacagcataggagtttccaaaacttcattgttgcgtttttgattatccaaggtgcgattttgagtcatttgaagtc 45257934  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||  |||||||||| ||||| ||| ||||||||    
T  45257933 atttcaagccaatttcaatcacaaaaacaagtaa 45257900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 41884265 - 41884152
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||| |||||||||||||| || |||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| || |||    
T  41884265 gagaattgctattcccacatgttgtgtggctgtgccacacgagtaaaatacgaaaatgtccttcggcagtttgctaccgaagtttttaggaaaccggcgg 41884166  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  41884165 cagttaactgccga 41884152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 322 - 447
Target Start/End: Complemental strand, 10524326 - 10524201
Alignment:
Q  322 aatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    |||||||||||||||||||  |||||||||||||||||||| | |||||||||||| ||| | |||||||| |||||||||||||||||| ||||  |||    
T  10524326 aatgttataagaacagaacaacataggagtttccaaaactctaatgttgcgttttttattatccaaggtgcgattttgagtcatttgaagtcattccaag 10524227  T
Q  422 ccaattttaatcataaatacaagtaa 447  Q
    ||||||| ||||| ||| ||||||||    
T  10524226 ccaatttcaatcacaaaaacaagtaa 10524201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 35606723 - 35606836
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||||||| ||||||  | |||||||||||||| ||| ||||||||| |||||||||    
T  35606723 gagaattgttgttcccacatgttgtttgcctgtgccacacgagtaaaatacgaaaatgctcttcggcagtttgctatcgaagtttttaggcaatcgacgg 35606822  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  35606823 cagttaactgccga 35606836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 42503887 - 42504020
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| |||||||||||||||  ||  ||||||||||||||||||||||||||||||||||| | | | |||| ||| |||||||||||||||||| |    
T  42503887 ccgaggaaaatgttataagaacaacacaacataggagtttccaaaactccattgttgcgtttttgagtatccaagttgcgattttgagtcatttgaagac 42503986  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||||||| |||||| ||||| ||| ||||||||    
T  42503987 attagaagtcaatttcaatcacaaaaacaagtaa 42504020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 45767995 - 45767887
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||| |||    
T  45767995 attgctgttcccacat-ttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggcagt 45767897  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  45767896 taactgccga 45767887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 512 - 594
Target Start/End: Original strand, 45361895 - 45361977
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  45361895 cgattatataggttcgactatattgatttgttgattttatgatatgttaggataatttaggttagaatggtcagaattgttag 45361977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 40590352 - 40590270
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  40590352 cgattatataggttcgactatattgatttattgatgttatgatatgttaggataatttaggttagaatggttagaattgttag 40590270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 10524136 - 10524050
Alignment:
Q  512 cgattatataggttcgattatat----tgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  10524136 cgattatataggttcgattatatatattgatttgttgattttatgatatgttaggatattttaggttagaatggttagaattgttag 10524050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 30791143 - 30791034
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || ||| |||| |||| ||||||||||||||||| || ||| |||    
T  30791143 attgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcgacagtatgctgccgaggtttttaggaaaccggcggcagt 30791044  T
Q  252 taactgccga 261  Q
    ||||| ||||    
T  30791043 taactaccga 30791034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 513 - 586
Target Start/End: Original strand, 28977827 - 28977900
Alignment:
Q  513 gattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||    
T  28977827 gattatataggttcgactatattgatttgttgattttatgatatattaggatagtttaggttagaattgttaga 28977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 148 - 263
Target Start/End: Original strand, 20564007 - 20564122
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| | || ||  ||| ||| |||||||||||||||||||| || |||||||||||||||||| ||||| |||||| || |||    
T  20564007 gagaattgctgttcccacatatagtatggttgtgccatacgagtaaaataccaaaatgcccttcggcagtttgctaccgaagttttaaggaaaccggcgg 20564106  T
Q  248 tagttaactgccgaag 263  Q
     ||||| |||||||||    
T  20564107 cagttagctgccgaag 20564122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 31761826 - 31761771
Alignment:
Q  7 actgtggcctcttcggcttcgatggatcagacttagctttcttccaagccattaag 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31761826 actgtggcctcttcggcttcgatggatcagacttagctttcttcctagccattaag 31761771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 314 - 447
Target Start/End: Complemental strand, 34142662 - 34142528
Alignment:
Q  314 ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagc 412  Q
    ||||||| ||||||||||||| | ||| | ||||||||||||||||||||||||||||||||||| ||| | |  | ||| ||||||||  |||| ||||    
T  34142662 ccgaggaaaatgttataagaatataacagacataggagtttccaaaactccattgttgcgttttttattctccttgctgcgattttgagcaatttaaagc 34142563  T
Q  413 cattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||  |||||||||| ||||| ||| ||||||||    
T  34142562 cattccaagccaatttcaatcacaaaaacaagtaa 34142528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 532 - 594
Target Start/End: Original strand, 36392408 - 36392470
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36392408 tattgattttatgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 36392470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 447
Target Start/End: Original strand, 45361701 - 45361827
Alignment:
Q  322 aatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaa 420  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| | |||||   | | |||||||| ||||||||  |||| ||||||||  ||    
T  45361701 aatgttataagaacagaacagacataggagtttccaaaactccattgttacattttttgatctccaaggtgcgattttgagctatttcaagccattctaa 45361800  T
Q  421 gccaattttaatcataaatacaagtaa 447  Q
     ||||||| ||||||||| ||||||||    
T  45361801 accaatttcaatcataaaaacaagtaa 45361827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 7004 - 7089
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttt 233  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||| |||  ||||| ||||||||||||  ||||||| |||||    
T  7004 gagaattgctgttcccacatgttgtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagtttt 7089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 315 - 447
Target Start/End: Complemental strand, 48194634 - 48194501
Alignment:
Q  315 cgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    |||||| ||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||| ||||| |  | ||| ||||||||  |||||||||     
T  48194634 cgaggaaaatgttataagaacataacagacataggagtttccaaaactctattgttgcgtttttgattttccttgctgcgattttgagcaatttgaagct 48194535  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||  |||| ||||| ||||| ||| ||||||||    
T  48194534 attccaagcgaatttcaatcacaaaaacaagtaa 48194501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 343 - 447
Target Start/End: Complemental strand, 15309949 - 15309845
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaataca 442  Q
    |||||||||||||||||||||||||||  ||||||  || | | ||||||||||||||||||||| ||| ||||  |||||||||| ||||| ||| |||    
T  15309949 cataggagtttccaaaactccattgttttgtttttggttctcctaggtgcaattttgagtcatttcaagtcattccaagccaatttcaatcacaaaaaca 15309850  T
Q  443 agtaa 447  Q
    |||||    
T  15309849 agtaa 15309845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Original strand, 21185911 - 21185963
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21185911 ttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 21185963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 42683991 - 42683939
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42683991 ttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 42683939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 323 - 443
Target Start/End: Original strand, 46596964 - 46597084
Alignment:
Q  323 atgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    |||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||| | |  ||||  ||||||||  |||||||||||||  |||    
T  46596964 atgttataagaacagaacagacatagaagtttccaaaactccattgttgcgttttttattctccttggtgagattttgagcaatttgaagccatt-caag 46597062  T
Q  422 ccaattttaatcataaatacaa 443  Q
    ||||||| ||||| ||| ||||    
T  46597063 ccaatttcaatcacaaaaacaa 46597084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 18105370 - 18105438
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  18105370 cggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 18105438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 8186 - 8115
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||||| |||  ||||| ||||||||||||    
T  8186 tgagaattgctgttcccacatgttgtttggctgtgccacacaagtaaattactcaaatgcccctcggcagtt 8115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 343 - 401
Target Start/End: Complemental strand, 10225817 - 10225759
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgag 401  Q
    ||||||||||||||||||||||||||||||||||| ||| | | |||||||||||||||    
T  10225817 cataggagtttccaaaactccattgttgcgtttttgattctcctaggtgcaattttgag 10225759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 447
Target Start/End: Complemental strand, 40590545 - 40590419
Alignment:
Q  322 aatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaa 420  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||| | |||||||   | | |||||||| ||||||||  |||| ||||||||  ||    
T  40590545 aatgttataagaacagaacagacataggagtttccaaaattccattgctacgttttttgatctccaaggtgcgattttgagctatttcaagccattccaa 40590446  T
Q  421 gccaattttaatcataaatacaagtaa 447  Q
    |||||||| ||||  ||| ||||||||    
T  40590445 gccaatttcaatcgcaaaaacaagtaa 40590419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 542 - 592
Target Start/End: Complemental strand, 41623667 - 41623617
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgtt 592  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  41623667 ttgattttatgatatgttaggatagtttaggttagaatagttagaattgtt 41623617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 18105307 - 18105420
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | || || | ||||||||||||||||||||  |||||||| |||| |||   || |||| |||||||||||| || |||    
T  18105307 gagaattgttgttcccacatatagtatggccgtaccacacgagtaaaatacggaaatgtccttcggtagtaaactgccgaagtttttaggaaaccggcgg 18105406  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  18105407 cagttaactgccga 18105420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 10225651 - 10225599
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  10225651 ttgattttatgatatgttaggataatttaggttacaatggttagaattgttag 10225599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 15074304 - 15074236
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||  |||| || ||||||||||||||||    
T  15074304 cggtagtaaactgccgaagttcttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 15074236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 594
Target Start/End: Original strand, 46860769 - 46860859
Alignment:
Q  512 cgattatataggttcgattatat-tgatttgttgatttta-------tgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||||||||| || ||| |||||||||       ||||||||| |||||||||||||||||||||||||| |||||||    
T  46860769 cgattatataggttcgattatatatgttttattgattttatgatttatgatatgttaggatagtttaggttagaatggttagagttgttag 46860859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 40141366 - 40141252
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    |||| |||| ||||||||||| | ||||| |||| ||||||||||||| |||  ||||| || |||| |||||| | |||| |||||||||||| || ||    
T  40141366 tgagtattgttgttcccacatatagtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtttgttgccgaagtttttaggaaaccggcg 40141267  T
Q  247 gtagttaactgccga 261  Q
      |||||||||||||    
T  40141266 acagttaactgccga 40141252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 42582050 - 42582120
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | ||||| || | ||||||||||||| |||  ||||||||||||||||||    
T  42582050 gagaattgctgttcccacatttggtttggctatgccacacgagtaaattactcaaatgtccctcggcagtt 42582120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 46860590 - 46860644
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  46860590 tgttataagaacagaacagacataggagtttccaaaactccattgttgcggtttt 46860644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 15074367 - 15074254
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | || || |||| ||||||||||||||||| |||||| || |||| |||   || |||| ||| |||||||| || |||    
T  15074367 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacgaaaatgcccttcggtagtaaactgccgaagttcttaggaaaccggcgg 15074268  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  15074267 cagttaactgccga 15074254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 42736862 - 42736809
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||| |||||||    
T  42736862 tgttatatgaacagaacagcatcggagtttccaaaactccattgttacgttttt 42736809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 10097926 - 10097982
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagttac 314  Q
    |||||||||||||||| |||||||||||||  |||| || |||||||||||||||||    
T  10097926 ccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagttac 10097982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 10098193 - 10098125
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||  |||| || |||||||||| |||||    
T  10098193 cggtagtaaactgccgaagtttttaggaaaccggctgcagttaactgccgaggaaaacctcgggagtta 10098125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 447
Target Start/End: Original strand, 28112862 - 28112986
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||||||| ||| | |||||||||||||||||||| |||||| | ||||| ||| | | |||||| ||||||||  |||| ||| ||||  || |    
T  28112862 tgttataagaacataacagacataggagtttccaaaactctattgttacattttttattctcctaggtgcgattttgagcaatttcaagtcattccaaac 28112961  T
Q  423 caattttaatcataaatacaagtaa 447  Q
    |||||| ||||| ||| ||||||||    
T  28112962 caatttcaatcacaaaaacaagtaa 28112986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 258
Target Start/End: Complemental strand, 42508168 - 42508056
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||| ||||||||||| | || || |||| |||||||||||||||||  ||||| || |||| |||   || |||| |||||||||||| || |    
T  42508168 ttgagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 42508069  T
Q  246 ggtagttaactgc 258  Q
    || ||||||||||    
T  42508068 ggcagttaactgc 42508056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 12210728 - 12210658
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | ||||| |||| ||| ||||||||| |||  ||||| ||||||||||||    
T  12210728 gagaattgctgttcccacatttggtttggctgtgccatacgagtaaattactcaaatgcccctcggcagtt 12210658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 42508103 - 42508061
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  42508103 cggtagtaaactgccgaagtttttaggaaaccggcggcagtta 42508061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 43032971 - 43033013
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  43032971 cggtagttaactgccgaggtttttaggaaaccggcggcagtta 43033013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 7975677 - 7975620
Alignment:
Q  253 aactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtag 310  Q
    |||||||||||||||||| || |||||||||||||  |||| || |||||||||||||    
T  7975677 aactgccgaagtttttagtaaaccggcggcagttaactgccgaggaaaacctcggtag 7975620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 7975748 - 7975635
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | |||||  ||| |||||||||||   ||| ||||||||| ||||||||   || |||| |||||||| ||| || |||    
T  7975748 gagaattgttgttcccacatttggtttggttgtgccacacgagtactttacgaaaatgtccttcggcagtaaactgccgaagtttttagtaaaccggcgg 7975649  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  7975648 cagttaactgccga 7975635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 20876395 - 20876448
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||| ||| | |||||||||||||||||||||||||| |||||||    
T  20876395 tgttatatgaacataacaggataggagtttccaaaactccattgttacgttttt 20876448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 34142459 - 34142393
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||        ||||||||||| ||||| ||||||||||||| ||||||    
T  34142459 cgattatataggttcgattatattgattt--------tatgatatgttaggataatttaggttagaattgttaga 34142393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 218
Target Start/End: Complemental strand, 35610557 - 35610484
Alignment:
Q  145 gttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||||||||||||||||| | || || |||| |||||| |||||||||| |||||| |  |||||||||    
T  35610557 gttgagaattgctgttcccacatatagtatggctgtgccacaccagtaaaatacgaaaatgccattcggcagtt 35610484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 41880447 - 41880532
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggttt 232  Q
    ||||||||| ||||||||||| | || ||  ||| ||||||||||||||||| |||||| || |||||||||  ||||||| ||||    
T  41880447 tgagaattgttgttcccacatatagtatggttgtgccacacgagtaaaatacgaaaatgcccttcggcagttaactaccgaagttt 41880532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 48194431 - 48194365
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||        ||||||||||| |||| |||||||||||||| ||||||    
T  48194431 cgattatataggttcgattatattgattt--------tatgatatgttaggattgtttaggttagaattgttaga 48194365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 48403310 - 48403419
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||| | || || |||| |||||| |||||||||| |||||| || |||||||||  || |||| |||||||| ||| || ||| ||     
T  48403310 attgctgttcccacatatagtatggctgtgccacaccagtaaaatacaaaaatgcccttcggcagttaactgccgaagtttttagcaaaccggcggcagc 48403409  T
Q  252 taactgccga 261  Q
    ||||| ||||    
T  48403410 taactaccga 48403419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 15899691 - 15899739
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcg 372  Q
    ||||||| ||||||||| |||||||||||||||||| || |||||||||    
T  15899691 tgttatatgaacagaacagcataggagtttccaaaaatctattgttgcg 15899739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 27656971 - 27657043
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||||| | |||||  ||| ||||||||||||| ||   ||||| ||||||||||||    
T  27656971 ttgagaattgctgttcccacatttggtttggttgtgccacacgagtaaattattcaaatgcccctcggcagtt 27657043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 322 - 447
Target Start/End: Original strand, 28977640 - 28977761
Alignment:
Q  322 aatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    |||||||||||||||||    |||||||||||||||||||| |||||| || ||||   | |||||||||| ||||||||  |||| ||| ||||  ||     
T  28977640 aatgttataagaacaga----cataggagtttccaaaactctattgttacgatttttgatcttcaaggtgcgattttgagctatttcaagtcattccaat 28977735  T
Q  422 ccaattttaatcataaatacaagtaa 447  Q
    ||||||| ||||| | | ||||||||    
T  28977736 ccaatttcaatcacataaacaagtaa 28977761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 372
Target Start/End: Original strand, 2204171 - 2204206
Alignment:
Q  337 gaactgcataggagtttccaaaactccattgttgcg 372  Q
    |||| |||||||||||||||||||||||||||||||    
T  2204171 gaacagcataggagtttccaaaactccattgttgcg 2204206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 10098258 - 10098143
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | || || |||| ||||||||||||  |||  ||||| || |||| |||   || |||| |||||||||||| || |    
T  10098258 ttgagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 10098159  T
Q  246 ggtagttaactgccga 261  Q
     | |||||||||||||    
T  10098158 tgcagttaactgccga 10098143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 20564083 - 20564138
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||| ||||| |||||||||||||| |||| |  ||||||||||||||||    
T  20564083 ccgaagttttaaggaaaccggcggcagttagctgccgaagaaaacctcggtagtta 20564138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 41884189 - 41884134
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || |||||||||| |||||    
T  41884189 ccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggaagtta 41884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 42795219 - 42795148
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||| ||||||||| | | ||||| |||| ||||||||||||| |||  |||| |||||||||||||    
T  42795219 tgagaattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatatccctcggcagtt 42795148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 45767924 - 45767869
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  45767924 ccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 45767869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 10524495 - 10524425
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | ||||| ||||  |||||||||||| |||  ||||| ||||||||||||    
T  10524495 gagaattgttgttcccacatttggtttggctgtgtcacacgagtaaattactcaaatgcccctcggcagtt 10524425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 30786548 - 30786586
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  30786548 agttaactgccgaggtttttaggaaaccggcggcagtta 30786586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 30791074 - 30791016
Alignment:
Q  255 ctgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||| |||||||||||||  | || || ||||||||||||||||    
T  30791074 ctgccgaggtttttaggaaaccggcggcagttaactaccgaggaaaacctcggtagtta 30791016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 42684191 - 42684137
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||| ||| | |||| ||||||||||||||||||||||||| ||||    
T  42684191 tgttataagaacataacagacatatgagtttccaaaactccattgttgcggtttt 42684137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 377
Target Start/End: Original strand, 43349739 - 43349773
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||||||||||||| |||||||    
T  43349739 cataggagtttccaaaactccattgttacgttttt 43349773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 46907474 - 46907544
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | ||||| || | ||||||||||||| |||  ||||| || |||||||||    
T  46907474 gagaattgctgttcccacatttggtttggctatgccacacgagtaaattactcaaatgcccttcggcagtt 46907544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 49141756 - 49141686
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | ||||| || | ||||||||||||| |||  ||||| ||||||||||||    
T  49141756 gagaattgttgttcccacatttggtttggctatgccacacgagtaaattactcaaatgcccctcggcagtt 49141686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 603789 - 603842
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagt 311  Q
    |||||||||||||||| |||||||||||||  |||| || ||||||| ||||||    
T  603789 ccgaagtttttaggaaaccggcggcagttaactgccgaggaaaaccttggtagt 603842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 369
Target Start/End: Complemental strand, 17185054 - 17185017
Alignment:
Q  332 gaacagaactgcataggagtttccaaaactccattgtt 369  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  17185054 gaacaaaacagcataggagtttccaaaactccattgtt 17185017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 48314753 - 48314806
Alignment:
Q  325 gttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||| ||| | ||||||||||||||||| |||||||||||| ||||    
T  48314753 gttataagaacataacagacataggagtttccaaaattccattgttgcggtttt 48314806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 377
Target Start/End: Original strand, 1640991 - 1641019
Alignment:
Q  349 agtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||||||||||||||||    
T  1640991 agtttccaaaactccattgttgcgttttt 1641019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 17465854 - 17465782
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| ||||||||||| | || || |||| |||||| |||||||||| |||||  || |||||||||    
T  17465854 ttgagaattgatgttcccacatatagtatggctgtgccacaccagtaaaatacgaaaatacccttcggcagtt 17465782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 17587360 - 17587432
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| ||||||||||| | || || |||| |||||| |||||||||| |||||  || |||||||||    
T  17587360 ttgagaattgatgttcccacatatagtatggctgtgccacaccagtaaaatacgaaaatacccttcggcagtt 17587432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 17834489 - 17834552
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||||||| || || |||||||||||||  |||| || ||||| ||||||||||    
T  17834489 agttaactgccgaagtttt-agtaaaccggcggcagttaactgccgaggaaaacttcggtagtta 17834552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 152 - 447
Target Start/End: Original strand, 483721 - 484019
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||| ||||||||||| | |||||  ||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  || ||| |||    
T  483721 attgttgttcccacatatagtttggttgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaggtttttaggaac-cggcggcagt 483819  T
Q  252 taactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcatag 347  Q
    |||||||||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    |||||||||||||||||||| ||||||| |||||    
T  483820 taactgccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagatcagaacttcatag 483919  T
Q  348 gagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  483920 gagtttccaaaactccattgttgcgtttttaatttttgaaggtgcgattttgagtcatttgaagccattagaagccaattttaatcacaaaaacaagtaa 484019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 147 - 407
Target Start/End: Complemental strand, 22519735 - 22519472
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    |||||||| |||||||||||| | |||||  ||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||  || ||    
T  22519735 tgagaattactgttcccacatatagtttggttgtgccacacgagtaaaataccaaaatgcccttcggcagtttgctaccgaggtttttaggaac-cggcg 22519637  T
Q  247 gtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg 342  Q
    | |||||||| |||||||||||||||  ||||||||||||| ||||| || ||||||||||||||||    ||||||||||||||||||||||||||||     
T  22519636 gcagttaactaccgaagtttttaggacaccggcggcagttaagtgccgaggaaaacctcggtagttaactgccgaggagaatgttataagaacagaactt 22519537  T
Q  343 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcattt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22519536 cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcgattttgagtcattt 22519472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 245 - 447
Target Start/End: Original strand, 15030881 - 15031087
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaac 340  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  |||| || |||||||||| |||||    ||||||| |||||||||||||||||||    
T  15030881 cggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaatgttataagaacagaac 15030980  T
Q  341 tgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaata 440  Q
    ||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||| |    
T  15030981 tgcataggagtttccaaaattccattgttgcgtttttaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaa 15031080  T
Q  441 caagtaa 447  Q
    |||||||    
T  15031081 caagtaa 15031087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 245 - 447
Target Start/End: Complemental strand, 45066437 - 45066231
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaac 340  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  |||| || |||||||||||| |||    ||||||| |||||||||||||||||||    
T  45066437 cggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtaattaactgccgaggaaaatgttataagaacagaac 45066338  T
Q  341 tgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaata 440  Q
    |||||||||||||||||||||||||||||| ||||| |||| | |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||| |    
T  45066337 tgcataggagtttccaaaactccattgttgtgttttgaattatccaaggtgcgattttgagtcatttgaagccattacaagccaatttcaatcacaaaaa 45066238  T
Q  441 caagtaa 447  Q
    |||||||    
T  45066237 caagtaa 45066231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 512 - 633
Target Start/End: Original strand, 484084 - 484204
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  484084 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagtg 484183  T
Q  612 tagggttgaattgatcgccata 633  Q
    || |||||||||||||||||||    
T  484184 ta-ggttgaattgatcgccata 484204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 147 - 313
Target Start/End: Original strand, 42481459 - 42481626
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccc-tcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    ||||||||||||||| ||| ||||||||| |||| |||||||||||||||| ||||||| ||| || ||||||||||| ||| |||||||||||| || |    
T  42481459 tgagaattgctgttctcacgtgttgtttggctgtgccacacgagtaaaatatcaaaatgccccctcagcagtttgctatcgaagtttttaggaaaccggc 42481558  T
Q  246 ggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    || |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42481559 ggcagttaattgccgaagtttttaggaatccggcggcagttaggtgccgagtaaaacctcggtagtta 42481626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 512 - 632
Target Start/End: Original strand, 15031151 - 15031270
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15031151 cgattatataggttcgattatattgatttgttgaatttatgatatgttaggatagtttaagttagaatggttagaattgttaggatagtttaggttagta 15031250  T
Q  612 tagggttgaattgatcgccat 632  Q
    || ||||||||||||||||||    
T  15031251 ta-ggttgaattgatcgccat 15031270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 512 - 632
Target Start/End: Complemental strand, 45066166 - 45066047
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45066166 cgattatataggtttgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 45066067  T
Q  612 tagggttgaattgatcgccat 632  Q
    ||  |||||||||||||||||    
T  45066066 ta-agttgaattgatcgccat 45066047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 249 - 443
Target Start/End: Original strand, 41016416 - 41016613
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    |||||||| |||||||||| || |||||  | |||||||  |||| || ||||||||||||||||    ||||||| |||||||||| ||||| ||  ||    
T  41016416 agttaactaccgaagtttt-agaaatccaactgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgttataacaacagcacaaca 41016514  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||||||||  |||||||||| ||||| ||| ||||    
T  41016515 taggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaagccattccaagccaatttcaatcacaaaaacaa 41016613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 7344698 - 7344583
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || |    
T  7344698 ttgagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggc 7344599  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  7344598 ggcagttaactgccga 7344583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 22014178 - 22014293
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||| || |    
T  22014178 ttgagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggc 22014277  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  22014278 ggcagttaactgccga 22014293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 22550936 - 22550734
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-c 343  Q
    ||||||||||||||||||| || |||||||| |||||||  |||| || ||||||||||||||||    ||||||| ||||||||||||||||||| | |    
T  22550936 agttaactgccgaagtttt-agaaatccggctgcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgttataagaacagaacggac 22550838  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    |||||||||||||||||||||||||||||||||| ||| | |  | |||  |||||||  |||||||||||||  |||||||||| ||||| ||| ||||    
T  22550837 ataggagtttccaaaactccattgttgcgtttttgattatccttgctgcggttttgagcaatttgaagccattccaagccaatttcaatcacaaaaacaa 22550738  T
Q  444 gtaa 447  Q
    ||||    
T  22550737 gtaa 22550734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 26455479 - 26455397
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26455479 cgattatataggttcgactatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 26455397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 512 - 594
Target Start/End: Original strand, 41016682 - 41016764
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  41016682 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaatggttag 41016764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 8419342 - 8419451
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    ||||||| ||| |||||||||||| |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| || ||| |||    
T  8419342 attgctgatccaacatgttgtttggctgtgccacacgagtaaaataccaaaatatccttcggcagtttgctaccgaggtttttaggaaaccggcggcagt 8419441  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  8419442 taactgccga 8419451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 17924418 - 17924309
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||| |||    
T  17924418 attgttgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggcagt 17924319  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  17924318 taactgccga 17924309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 512 - 594
Target Start/End: Complemental strand, 41276689 - 41276607
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  41276689 cgattatataggttcgactatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagagttgttag 41276607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 32375589 - 32375698
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| ||||||  || || |||||||||||||||||||||||||||| || ||| |||    
T  32375589 attgctgttcccacatgttgtttggctgtgccacacgagtaaaatatcaaaatacccttcagcagtttgctaccgaggtttttaggaaaccggcggcagt 32375688  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  32375689 taactgccga 32375698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 147 - 260
Target Start/End: Original strand, 36677645 - 36677758
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||| | |||||||||||| || ||    
T  36677645 tgagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccaaagtttttaggaaaccggcg 36677744  T
Q  247 gtagttaactgccg 260  Q
    | ||||||||||||    
T  36677745 gcagttaactgccg 36677758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 17924040 - 17924127
Alignment:
Q  153 ttgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaa 240  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  17924040 ttgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaa 17924127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 23018619 - 23018730
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    ||||||||||||| |||||| ||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| ||||||||| || || |||    
T  23018619 gagaattgctgtttccacatcttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaaccggcgg 23018718  T
Q  248 tagttaactgcc 259  Q
    ||||||||||||    
T  23018719 tagttaactgcc 23018730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 21720 - 21833
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| ||||||| |||| ||||||||||||||||| |||||| |  |||||||||||||||||| ||||||||| || || |||    
T  21720 gagaattgttgttcccacatcttgtttggctgtgccacacgagtaaaatacgaaaatgccattcggcagtttgctaccgaagtttttaggcaaccggcgg 21819  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  21820 cagttaactgccga 21833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 26663172 - 26663059
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||| ||||||||| ||||||| |||| ||||||||||||||||| ||||||||  || ||||||||||||||| ||||||||| || || |||    
T  26663172 gagaattgctattcccacattttgtttggctgtgccacacgagtaaaatacgaaaatgtctttcagcagtttgctaccgaagtttttaggcaaccggcgg 26663073  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  26663072 cagttaactgccga 26663059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 22550669 - 22550595
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  22550669 cgattatataggttcgattatattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 22550595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 1056340 - 1056227
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| ||||||||||||  |||||||||||||||| |||||| || ||||||||||||||| || ||||||||| || |  |||    
T  1056340 gagaattgttgttcccacatcttgtttgactgtgtcacacgagtaaaatacgaaaatgcccttcggcagtttgctactgaagtttttaggcaaccagcgg 1056241  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  1056240 cagttaactgccga 1056227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 2878518 - 2878629
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||  | ||||||||| ||||  ||||||||||||||||||||||| || |||||||||||| ||||| |||||||| ||| |||||     
T  2878518 gagaattgttgttcctgcgtgttgtttggctgtgtcacacgagtaaaataccaaaatgcccttcggcagtttgccaccgaagtttttagtaaaccgacga 2878617  T
Q  248 tagttaactgcc 259  Q
     |||||||||||    
T  2878618 cagttaactgcc 2878629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 2335288 - 2335201
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttt 233  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||||||| |||  ||||| ||||||||||||  ||||||| |||||    
T  2335288 ttgagaattgttgttcccacatgttgtttggctgtgccacacgagtaaattactcaaatgcccctcggcagttaactaccgaagtttt 2335201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 272 - 447
Target Start/End: Complemental strand, 44052275 - 44052095
Alignment:
Q  272 aatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccatt 366  Q
    |||||||| |||||||  | || || ||||||||||||||||    || | || ||||||||||||| | ||||| |||||||||||||||||||| |||    
T  44052275 aatccggctgcagttacctaccgaggaaaacctcggtagttaactaccaatgaaaatgttataagaatataactgacataggagtttccaaaactctatt 44052176  T
Q  367 gttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    ||| |||||||   | | |||||||| ||||||||  |||| ||||||||  |||||||||| ||||| ||| ||||||||    
T  44052175 gttacgttttttgatctccaaggtgccattttgagctatttcaagccatttcaagccaatttcaatcacaaaaacaagtaa 44052095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 326 - 447
Target Start/End: Complemental strand, 41276877 - 41276755
Alignment:
Q  326 ttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagcca 424  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| |||||||   | | |||||| | ||||||||  |||| ||||||||  ||||||    
T  41276877 ttataagaacagaacagacataggagtttccaaaactccattgttacgttttttgatctccaaggtacgattttgagctatttcaagccattccaagcca 41276778  T
Q  425 attttaatcataaatacaagtaa 447  Q
    |||| ||||| ||| ||||||||    
T  41276777 atttcaatcacaaaaacaagtaa 41276755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 184628 - 184560
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  184628 cggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 184560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 36678005 - 36677937
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  36678005 cggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 36677937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 215
Target Start/End: Original strand, 184309 - 184376
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggca 215  Q
    |||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||| || ||||||    
T  184309 gagaattgttgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggca 184376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 344 - 447
Target Start/End: Complemental strand, 40704132 - 40704029
Alignment:
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    ||||||||||||||||||||||||||||||||||  || |||   |||| ||||||||  |||||||| ||||  |||||||||| ||||| ||| ||||    
T  40704132 ataggagtttccaaaactccattgttgcgttttttgttcttctttgtgcgattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaacaa 40704033  T
Q  444 gtaa 447  Q
    ||||    
T  40704032 gtaa 40704029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 528 - 586
Target Start/End: Complemental strand, 24862935 - 24862877
Alignment:
Q  528 attatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  24862935 attatattgatttcatgattttatgatatgttaggatagtttaggttagaattgttaga 24862877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 42485677 - 42485607
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | || || |||| |||||||||||||||| |||||||||| |||||||||    
T  42485677 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatatcaaaatgtccttcggcagtt 42485607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 30301160 - 30301224
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagt 217  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||    
T  30301160 attgctgttcccacatgttgtttg-ctgtgccacacgagtaaaataccaaaatacccttcggcagt 30301224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 276 - 447
Target Start/End: Original strand, 41855396 - 41855567
Alignment:
Q  276 cggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgc 371  Q
    |||| |||||||  |||| || ||||||||||||||||    ||||| |  |||||||||||||| ||    |||||||||| |||||||||||||||||    
T  41855396 cggctgcagttaactgccgaggaaaacctcggtagttaactaccgagaaatatgttataagaacataa----ataggagttttcaaaactccattgttgc 41855491  T
Q  372 gtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    |||||| ||| | |  ||||| ||||||||  |||||||| ||||  || ||||||| ||||| ||| ||||||||    
T  41855492 gttttttattctccttggtgcgattttgagcaatttgaagtcattccaaaccaatttcaatcacaaaaacaagtaa 41855567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 489767 - 489695
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||||| | || || |||| ||||||||||||||||| |||||| || |||||||||    
T  489767 ttgagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatactaaaatgcccttcggcagtt 489695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 28168596 - 28168472
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||||||||||| | |||| |||||| ||||||| ||||||||||||||| ||| | |  ||||| ||||||||  |||| ||| ||||  ||||    
T  28168596 tgttataagaacagaacagacatatgagttttcaaaacttcattgttgcgttttttattctcctgggtgcgattttgagcaatttcaagtcattccaagc 28168497  T
Q  423 caattttaatcataaatacaagtaa 447  Q
    |||||| ||||| ||| ||||||||    
T  28168496 caatttcaatcacaaaaacaagtaa 28168472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 434
Target Start/End: Complemental strand, 42605229 - 42605117
Alignment:
Q  323 atgttataagaacagaactgc-ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    |||||||||||||| ||| |  |||| ||||||||||||||||||||||||||||| ||| | |  ||||| ||||||||  |||||||| ||||  |||    
T  42605229 atgttataagaacataacagatatagtagtttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaag 42605130  T
Q  422 ccaattttaatca 434  Q
    ||||||| |||||    
T  42605129 ccaatttcaatca 42605117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 28168382 - 28168323
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  28168382 gattttattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 28168323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 38872745 - 38872671
Alignment:
Q  512 cgattatataggttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||| ||||   |||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  38872745 cgattatataggttcgat-atataagtttgattgattttatgatatgttaggatagtttaggttagaattgttaga 38872671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 18438927 - 18438981
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  18438927 tattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 18438981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 447
Target Start/End: Complemental strand, 26455671 - 26455545
Alignment:
Q  322 aatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaa 420  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||||| | |||||   | | |||||||| ||||||||  |||| ||| ||||   |    
T  26455671 aatgttataagaacagaataggcataggagtttccaaaactccattgttacattttttgatctccaaggtgcgattttgagctatttcaagtcattctca 26455572  T
Q  421 gccaattttaatcataaatacaagtaa 447  Q
    |||||||| ||||| ||| ||||||||    
T  26455571 gccaatttcaatcacaaaaacaagtaa 26455545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 15030818 - 15030931
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | ||||| |||| ||||||||||||| |||  ||||| || |||| |||   || |||| |||||||||||| || |||    
T  15030818 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcgg 15030917  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  15030918 cagttaactgccga 15030931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 261
Target Start/End: Complemental strand, 45066500 - 45066387
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||| ||||||||||| | ||||| |||| ||||||||||||| |||  ||||| || |||| |||   || |||| |||||||||||| || |||    
T  45066500 gagaattgttgttcccacatttggtttggctgtgccacacgagtaaattactcaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcgg 45066401  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  45066400 cagttaactgccga 45066387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 585
Target Start/End: Complemental strand, 42605030 - 42604958
Alignment:
Q  514 attatataggttcgattatattgatttg-ttgattttatgatatgtttggatagtttaggttagaatggttag 585  Q
    |||| |||||||||||||||| | |||  |||||||||||||||||| ||||| ||||||||||||| |||||    
T  42605030 attacataggttcgattatataggttttattgattttatgatatgttaggataatttaggttagaattgttag 42604958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 184693 - 184578
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | || || |||| ||||||||||||  |||  ||||| || |||| |||   || |||| |||||||||||| || |    
T  184693 ttgagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 184594  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  184593 ggcagttaactgccga 184578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 22014256 - 22014311
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  22014256 ccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 22014311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 36678070 - 36677955
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | || || |||| ||||||||||||  |||  ||||| || |||| |||   || |||| |||||||||||| || |    
T  36678070 ttgagaattgctgttcccacatatggtatggctgtgccacacgagtaagttacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggc 36677971  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  36677970 ggcagttaactgccga 36677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 43211472 - 43211579
Alignment:
Q  154 tgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagtta 253  Q
    |||||||||||||| | ||| | |||| |||||||||||   ||| |||||| || |||||||||| || ||||  ||||||| ||| |||||| |||||    
T  43211472 tgctgttcccacatttggttcggctgtgccacacgagtactttacgaaaatgcccttcggcagtttactgccgaaatttttagtaaaccgacggcagtta 43211571  T
Q  254 actgccga 261  Q
    ||||||||    
T  43211572 actgccga 43211579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 25673 - 25603
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | || || |||| |||||||||||||||| ||||||| || |||||||||    
T  25673 gagaattgttgttcccacatatagtatggctgtgccacacgagtaaaatatcaaaatgcccttcggcagtt 25603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 218
Target Start/End: Original strand, 2416137 - 2416207
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||| ||||||||||| | || || |||| |||||| |||||||||||||||||||| ||| |||||    
T  2416137 gagaattgttgttcccacatatagtatggctgtgccacacaagtaaaataccaaaatgtccttcgacagtt 2416207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 287
Target Start/End: Complemental strand, 22014511 - 22014469
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||| ||||||||||||||||||||| |||||||||||||    
T  22014511 cggtagtaaactgccgaagtttttaggaaaccggcggcagtta 22014469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 22510486 - 22510552
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| ||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  22510486 attgctgttctcacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 22510552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 26659391 - 26659476
Alignment:
Q  151 aattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttag 236  Q
    ||||||||||||||||| | || || |||| |||||| |||||||||| |||||| || |||||||||  || |||| ||||||||    
T  26659391 aattgctgttcccacatatagtatggctgtgccacaccagtaaaatacgaaaatgcccttcggcagttaactgccgaagtttttag 26659476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 32585130 - 32585058
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||| ||||||||| | ||||| || | ||||||||||||| |||  ||||||||||||| ||||    
T  32585130 ttgagaattgctattcccacatttggtttggctatgccacacgagtaaattactcaaatgtccctcggtagtt 32585058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 579
Target Start/End: Complemental strand, 44052018 - 44051966
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaat 579  Q
    |||| |||||||||  ||||| ||||||||||| |||||||||||||||||||    
T  44052018 gattttattgattttatgattctatgatatgttaggatagtttaggttagaat 44051966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 8419414 - 8419469
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  8419414 ccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 8419469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 17924346 - 17924291
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  17924346 ccgaggtttttaggaaaccggcggcagttaactgccgagaaaaacctcggtagtta 17924291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 377
Target Start/End: Complemental strand, 26488441 - 26488406
Alignment:
Q  342 gcataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||||||||||||||| |||||||    
T  26488441 gcataggagtttccaaaactccattgttacgttttt 26488406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 26663096 - 26663041
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| | |||||||||||||  |||| || ||||||||||||||||    
T  26663096 ccgaagtttttaggcaaccggcggcagttaactgccgaggaaaacctcggtagtta 26663041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 32375661 - 32375716
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  32375661 ccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 32375716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 30305615 - 30305577
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  30305615 agttaactgccgaggtttttaggaaaccggcggcagtta 30305577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 1052492 - 1052605
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| | || ||  ||| |||||| |||||||||| |||||| || |||| ||||  || |||| ||||||||  || || |||    
T  1052492 gagaattgctgttcccacatatagtatggatgtgccacaccagtaaaatacgaaaatgcccttcggtagttaactgccgaagtttttagtgaaccggcgg 1052591  T
Q  248 tagttaactgccga 261  Q
     || ||||||||||    
T  1052592 cagctaactgccga 1052605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 27501535 - 27501620
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttt 233  Q
    |||||||||||||||||| | | ||||| |||| ||||||||||||| |||  ||||  | ||||||||||  ||||||| |||||    
T  27501535 gagaattgctgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacctctcggcagttaactaccgaagtttt 27501620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Original strand, 38032291 - 38032336
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgtt 369  Q
    ||||||| ||||| ||| ||||||||||||||||||||| ||||||    
T  38032291 tgttatatgaacataacagcataggagtttccaaaactcaattgtt 38032336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 8423867 - 8423815
Alignment:
Q  209 ctcggcagtttgctaccgaggtttttaggaaatcgacggtagttaactgccga 261  Q
    ||||||||||  || |||||||||||||||||||| ||| |||||||| ||||    
T  8423867 ctcggcagttaactgccgaggtttttaggaaatcggcggcagttaactaccga 8423815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 23022428 - 23022356
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| ||||||||||| | || || |||| |||||  |||||||||| |||||| || |||||||||    
T  23022428 ttgagaattgttgttcccacatatagtatggctgtgccacatcagtaaaatacgaaaatgcccttcggcagtt 23022356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 31185585 - 31185513
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| ||||||||| | | ||||| |||| ||||||||||||| |||  ||||  ||||||||||||    
T  31185585 ttgagaattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagtt 31185513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 325 - 377
Target Start/End: Complemental strand, 38872923 - 38872871
Alignment:
Q  325 gttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||| |   |||||||||||| |||||||||||||||||| ||||    
T  38872923 gttataagaacaaacaggcataggagttttcaaaactccattgttgcggtttt 38872871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 39601706 - 39601769
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||| |||||| |||||||| |||||||  |||| || |||||||||| |||||    
T  39601706 agttaactgccgaag-ttttagaaatccggctgcagttaactgccgaggaaaacctcgggagtta 39601769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 2e-60; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 147 - 313
Target Start/End: Complemental strand, 19928985 - 19928819
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| || |||||||||||| || ||    
T  19928985 tgagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatgcccctcgacagtttgctactgatgtttttaggaaaccggcg 19928886  T
Q  247 gtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    | ||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  19928885 gcagttaactgccgaagtttttaggaagccggcggcagttaagtgccgagtaaaacctcggtagtta 19928819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 512 - 632
Target Start/End: Original strand, 19162161 - 19162280
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 611  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19162161 cgattatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttaggatagtttaggttagta 19162260  T
Q  612 tagggttgaattgatcgccat 632  Q
    || ||| ||||||||||||||    
T  19162261 ta-ggtcgaattgatcgccat 19162280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 249 - 447
Target Start/End: Original strand, 19161894 - 19162095
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||| || |||||||| |||||||  |||| || |||||||||| |||||    ||||||| |||||||||||||||||||||||    
T  19161894 agttaactgccgaagtttt-agaaatccggctgcagttaactgccgaggaaaacctcgggagttaactgccgaggaaaatgttataagaacagaactgca 19161992  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||||||||||||||||||||||| ||||| ||| | |||||||| ||||||| |||||||||||||||  |||||||||| ||||| ||| |||||    
T  19161993 taggagtttccaaaactccattgttgcattttttattatccaaggtgcgattttgaatcatttgaagccattccaagccaatttcaatcacaaaaacaag 19162092  T
Q  445 taa 447  Q
    |||    
T  19162093 taa 19162095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 308 - 447
Target Start/End: Complemental strand, 49429170 - 49429031
Alignment:
Q  308 tagttaccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcattt 407  Q
    ||||| ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| | |||||||| ||||| ||||||||    
T  49429170 tagttgccgaggaaaatgttataagaacataacagcataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttaagtcattt 49429071  T
Q  408 gaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    |||| ||||  |||||||||| ||||| ||| ||||||||    
T  49429070 gaagtcattctaagccaatttcaatcacaaaaacaagtaa 49429031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 8548809 - 8548695
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||| || ||    
T  8548809 tgagaattgctgttcccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggaaaccggcg 8548710  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  8548709 gcagttaactgccga 8548695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 152 - 261
Target Start/End: Original strand, 38771567 - 38771676
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||| |||    
T  38771567 attgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggcggcagt 38771666  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  38771667 taactgccga 38771676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 3943906 - 3944021
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    ||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || |    
T  3943906 ttgagtattgctgtttccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctaccgaggtttttaggaaaccggc 3944005  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  3944006 ggcagttaactgccga 3944021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 512 - 594
Target Start/End: Original strand, 27485303 - 27485385
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27485303 cgattatataggttcgactatattgatttgttgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 27485385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 152 - 261
Target Start/End: Complemental strand, 20354070 - 20353961
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagt 251  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || |||||||||||||| |||||||||||||||| || ||| |||    
T  20354070 attgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctatcgaggtttttaggaaaccggcggcagt 20353971  T
Q  252 taactgccga 261  Q
    ||||||||||    
T  20353970 taactgccga 20353961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 252 - 447
Target Start/End: Original strand, 13633873 - 13634069
Alignment:
Q  252 taactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgcatag 347  Q
    |||||||||||||||  ||||| ||||||| |||||  |||| || ||||||||||||||||    |||| || |||||||||| |||| |||   ||||    
T  13633873 taactgccgaagtttgaaggaaaccggcggtagttaactgccgaggaaaacctcggtagttaactgccgaagaaaatgttataacaacacaac---atag 13633969  T
Q  348 gagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    |||||||||||||||||||||||||||||| | | | |||| ||| ||||||| |||||||||| ||||| |||||||||| ||||| ||| ||||||||    
T  13633970 gagtttccaaaactccattgttgcgtttttgagtatccaagttgcgattttgaatcatttgaagacattacaagccaatttcaatcacaaaaacaagtaa 13634069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 3993983 - 3993869
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    |||| |||||||||||||||||||||||| |||| |||||||||||||||| ||||||  || |||||||||||||| |||||||||||||||| || ||    
T  3993983 tgagtattgctgttcccacatgttgtttggctgtgccacacgagtaaaatatcaaaatacccttcggcagtttgctatcgaggtttttaggaaaccggcg 3993884  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  3993883 gcagttaactgccga 3993869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 540 - 632
Target Start/End: Original strand, 13634154 - 13634245
Alignment:
Q  540 tgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggttagtatagggttgaattgatcgccat 632  Q
    ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  13634154 tgttgatttcatgatattttaggatagtttaggttagaatggttagaattgttaggatagtttaggttaatata-ggttgaattgatcgccat 13634245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 48228120 - 48228046
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  48228120 cgattatataggttcgattatattgatttgttgattttatgatatgttaggataatttaggttagaatggttaga 48228046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 316 - 434
Target Start/End: Complemental strand, 48228312 - 48228194
Alignment:
Q  316 gaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccat 415  Q
    ||||| |||||||||| |||| |||  ||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||| |||    
T  48228312 gaggaaaatgttataaaaacataacaacataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaaggcat 48228213  T
Q  416 tagaagccaattttaatca 434  Q
    |  |||||||||| |||||    
T  48228212 tccaagccaatttcaatca 48228194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 249 - 447
Target Start/End: Complemental strand, 51271662 - 51271460
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-c 343  Q
    ||||||||||||||||||| || |||||||| |||||||  |||| || ||||||||||| ||||    ||| ||| ||||||||||||||||||| | |    
T  51271662 agttaactgccgaagtttt-agaaatccggctgcagttaattgccgaggaaaacctcggtggttaactgccggggaaaatgttataagaacagaacagac 51271564  T
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    |||||||||||||||||| ||||||||||||||| ||| | |  | ||| ||||||||  |||||||| ||||  |||||||||| ||||| ||| ||||    
T  51271563 ataggagtttccaaaacttcattgttgcgttttttattctccttgctgcgattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaacaa 51271464  T
Q  444 gtaa 447  Q
    ||||    
T  51271463 gtaa 51271460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 3728669 - 3728782
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacgg 247  Q
    |||||||||||||||||||| ||||||| |||| ||||||||||||||||| ||||||  | |||||||||||||||||| ||||||||| || || |||    
T  3728669 gagaattgctgttcccacatcttgtttggctgtgccacacgagtaaaatacgaaaatgctcttcggcagtttgctaccgaagtttttaggcaaccggcgg 3728768  T
Q  248 tagttaactgccga 261  Q
     |||||||||||||    
T  3728769 cagttaactgccga 3728782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 20556836 - 20556924
Alignment:
Q  152 attgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaa 240  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||  || |||||||||||||| ||||||||||||||||    
T  20556836 attgctgttcccacatgttgtttggctgtgccacacgagtaaaataccaaaatacccttcggcagtttgctatcgaggtttttaggaaa 20556924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 44336518 - 44336592
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  44336518 cgattatataggttcgactatattgatttgttgattttatgatatgttaggatagtttaggttagaattgttaga 44336592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 267 - 447
Target Start/End: Original strand, 44336268 - 44336453
Alignment:
Q  267 ttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-cataggagtttccaaaact 361  Q
    |||| ||| |||| |||||||  |||| || ||||||||||||||||    ||||| | ||||||||||||||||||| | |||||||||||||||||||    
T  44336268 ttagaaattcggctgcagttaactgccgaggaaaacctcggtagttaactgccgagaaaaatgttataagaacagaacagacataggagtttccaaaact 44336367  T
Q  362 ccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    | |||||| |||||||   | | ||| |||||||||||||| |||| ||||||||  |||||||||| ||||| ||| ||||||||    
T  44336368 caattgttacgttttttgatctccaatgtgcaattttgagttatttcaagccattccaagccaatttcaatcacaaaaacaagtaa 44336453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 15051488 - 15051374
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||||| |||||||||||||||||  |||  |||||||||||||||| |||||| || |||||||||||||||||| || ||||| ||| || ||    
T  15051488 tgagaattgctcttcccacatgttgtttggttgtgtcacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtatttagtaaaccggcg 15051389  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  15051388 gcagttaactgccga 15051374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 26879436 - 26879321
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||| ||||||||||| | || || |||| |||||| |||||||||| |||||| || |||||||||||||||||| ||||||||| || || |    
T  26879436 ttgagaattgttgttcccacatatagtatggctgtgccacaccagtaaaatacgaaaatgcccttcggcagtttgctaccgaagtttttaggcaaccggc 26879337  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  26879336 ggcagttaactgccga 26879321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 29622549 - 29622450
Alignment:
Q  162 ccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtagttaactgccga 261  Q
    |||||||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||| |||||| ||||| || ||| |||||| ||||||    
T  29622549 ccacatgttgtttggctgtgccacacgagtaaaatacgaaaatgcccttcggcagtttgctaccgaagttttttggaaaccggcggcagttaattgccga 29622450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 323 - 447
Target Start/End: Original strand, 49924935 - 49925060
Alignment:
Q  323 atgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||||||| ||| | |  ||||| ||||||||  |||||||| ||||  |||    
T  49924935 atgttataagaacaaaacagacataggagtttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaag 49925034  T
Q  422 ccaattttaatcataaatacaagtaa 447  Q
    ||||||| ||||| ||| ||||||||    
T  49925035 ccaatttcaatcacaaaaacaagtaa 49925060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 527 - 594
Target Start/End: Complemental strand, 6437319 - 6437252
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6437319 gattttattgattttatgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 6437252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 265 - 447
Target Start/End: Complemental strand, 44598962 - 44598775
Alignment:
Q  265 ttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactg-cataggagtttccaaaa 359  Q
    |||||| |||||||| |||||||  |||| || ||||| |||| |||||    ||||||| ||||||||||||||||||| | |||||||||||| ||||    
T  44598962 ttttagtaatccggctgcagttaactgccgaggaaaacttcgggagttaactgccgaggaaaatgttataagaacagaacagacataggagtttcaaaaa 44598863  T
Q  360 ctccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    |||||||||| |||||||   | | |||||||| ||||||||  |||| ||| ||||  |||||||||| ||| | ||| ||||||||    
T  44598862 ctccattgttacgttttttgatctccaaggtgcgattttgagctatttcaagtcattccaagccaatttcaataacaaaaacaagtaa 44598775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 594
Target Start/End: Original strand, 26633816 - 26633878
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||  ||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  26633816 tattgattttatgattttatgatatgttaggatagtgtaggttagaatggttagaattgttag 26633878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 447
Target Start/End: Original strand, 27485111 - 27485237
Alignment:
Q  322 aatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaa 420  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||   | | ||| |||| ||||||||  |||| ||||||||  ||    
T  27485111 aatgttataagaatagaacagacataggagtttccaaaactccattgttacgttttttgatctccaatgtgcgattttgagctatttcaagccattccaa 27485210  T
Q  421 gccaattttaatcataaatacaagtaa 447  Q
    |||||||| ||||| ||| ||||||||    
T  27485211 gccaatttcaatcacaaaaacaagtaa 27485237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 532 - 594
Target Start/End: Original strand, 46142052 - 46142114
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||  |||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  46142052 tattgattttatgattttatgatatattaggatagtttaggttagaatggttagaattgttag 46142114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 446
Target Start/End: Complemental strand, 29438014 - 29437890
Alignment:
Q  323 atgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    |||||||||||||| | | | ||||||||||||||||||||||||||||||||||| ||| | |  ||||| ||||||||  |||||||| ||||  ||     
T  29438014 atgttataagaacacagcggacataggagtttccaaaactccattgttgcgttttttattctccttggtgcgattttgagcaatttgaagtcattccaaa 29437915  T
Q  422 ccaattttaatcataaatacaagta 446  Q
    ||||||| ||||| ||| |||||||    
T  29437914 ccaatttcaatcacaaaaacaagta 29437890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 41803820 - 41803768
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  41803820 ttgattttatgatatgttaggatagtttaggttagaatggttaaaattgttag 41803768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 325 - 447
Target Start/End: Complemental strand, 6437532 - 6437409
Alignment:
Q  325 gttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagcc 423  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||||| |||| ||| |   |||||| |||||  ||||||  ||||||||| ||| |    
T  6437532 gttataagaacagaacaggcataggagtttctaaaactccattgttgcggttttcattctcttaggtgcgattttctgtcattccaagccattacaagtc 6437433  T
Q  424 aattttaatcataaatacaagtaa 447  Q
    ||||| ||||| ||| ||||||||    
T  6437432 aatttcaatcacaaaaacaagtaa 6437409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 19914400 - 19914471
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||| |||  ||||| ||||||||||||    
T  19914400 tgagaattgttgttcccacatgttgtttggctgtgccacacgagtaaattactcaaatgcccctcggcagtt 19914471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 19924688 - 19924759
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||||||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  19924688 tgagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 19924759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 532 - 595
Target Start/End: Complemental strand, 29437514 - 29437451
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttagg 595  Q
    |||||||||  |||||| ||||||| || |||||||||||||||||||||||||||||||||||    
T  29437514 tattgattttatgatttaatgatatattaggatagtttaggttagaatggttagaattgttagg 29437451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 30889992 - 30890065
Alignment:
Q  145 gttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    ||||||||||| ||||||||||| | || || |||| |||||||||||||||||||||||| || |||||||||    
T  30889992 gttgagaattgttgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgcccttcggcagtt 30890065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 13629336 - 13629408
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||||| | || ||  ||| |||||||||||||||||||||||| || |||||||||    
T  13629336 ttgagaattgctgttcccacatatagtatggttgtgccacacgagtaaaataccaaaatgcccttcggcagtt 13629408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 18974902 - 18974850
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  18974902 ttgattttatgatatgctaggatagtttaggttataatggttagaattgttag 18974850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 324 - 447
Target Start/End: Complemental strand, 49398463 - 49398340
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagc 422  Q
    ||||||||||||| ||| | ||||||||||||||||||| ||||||| ||||||| ||| | | |||||| ||||||||  |||||||| ||||  || |    
T  49398463 tgttataagaacataacagacataggagtttccaaaact-cattgttacgttttttattctcctaggtgctattttgagcaatttgaagtcattccaaac 49398365  T
Q  423 caattttaatcataaatacaagtaa 447  Q
    |||||| ||||| ||| ||||||||    
T  49398364 caatttcaatcacaaaaacaagtaa 49398340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 586
Target Start/End: Original strand, 29760799 - 29760858
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||||    
T  29760799 gattttattgattttatgattttatgatatgttaggatagtttaggttagaattgttaga 29760858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 532 - 587
Target Start/End: Complemental strand, 49398244 - 49398189
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaa 587  Q
    |||||||||  ||||||||| ||||||| |||||||||||||||||||||||||||    
T  49398244 tattgattttatgattttataatatgttaggatagtttaggttagaatggttagaa 49398189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 527 - 607
Target Start/End: Complemental strand, 49428942 - 49428866
Alignment:
Q  527 gattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttaggatagtttaggtt 607  Q
    |||| |||||||||  ||||||||||||||||| ||||||||||||||||||    |||||||||||| || |||||||||    
T  49428942 gattttattgattttatgattttatgatatgttaggatagtttaggttagaa----tagaattgttagaattgtttaggtt 49428866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 218
Target Start/End: Complemental strand, 3732492 - 3732422
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | || || |||| |||||||||||||||||||||||| |  |||||||||    
T  3732492 gagaattgctgttcccacatatagtatggctgtgccacacgagtaaaataccaaaatgccattcggcagtt 3732422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 12789789 - 12789842
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||| |||||||    
T  12789789 tgttatatgaacagaacagaataggagtttccaaaactccattgttacgttttt 12789842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 33285779 - 33285824
Alignment:
Q  332 gaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||    
T  33285779 gaacagaacagcataggagtttccaaaactccattgttacgttttt 33285824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 49260009 - 49260062
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||| |||||||    
T  49260009 tgttatatgaacagaacagcatagcagtttccaaaactccattgttacgttttt 49260062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 35585248 - 35585296
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcg 372  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||||    
T  35585248 tgttatatgaacagaacagcataagagtttccaaaactccattgttgcg 35585296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 42570226 - 42570326
Alignment:
Q  347 ggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagta 446  Q
    |||||||||||||||||||||||  |||||| ||| | | |||||| ||||||||  |||||||| ||||  ||| |||||| ||||| ||| |||||||    
T  42570226 ggagtttccaaaactccattgttatgttttttattctcctaggtgcgattttgagcaatttgaagtcattcaaagtcaatttcaatcacaaaaacaagta 42570325  T
Q  447 a 447  Q
    |    
T  42570326 a 42570326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 532 - 584
Target Start/End: Original strand, 42570398 - 42570450
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggtta 584  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||| ||||    
T  42570398 tattgattttatgattttatgatatgttaggatagtttaggttagaattgtta 42570450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 47652660 - 47652732
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||||||||||||| | | ||||| ||||  |||||||||||| |||  ||||||||||||||||||    
T  47652660 ttgagaattgctgttcccacgtttggtttggctgtgtcacacgagtaaattactcaaatgtccctcggcagtt 47652732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 8473714 - 8473801
Alignment:
Q  145 gttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggttt 232  Q
    |||||||||| |||||||||||| | || ||  ||| ||||||||||||||||| |||||| || |||||||||  ||||||| ||||    
T  8473714 gttgagaattactgttcccacatatagtatggatgtgccacacgagtaaaatacgaaaatgcccttcggcagttaactaccgaagttt 8473801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 8548732 - 8548677
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  8548732 ccgaagtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 8548677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 344 - 447
Target Start/End: Original strand, 29760604 - 29760707
Alignment:
Q  344 ataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaa 443  Q
    |||||||||| ||||||||||||||| |||||||   | | |||||||| ||||||||| |||| ||| ||||  |||||||||| ||||| ||| | ||    
T  29760604 ataggagttttcaaaactccattgttacgtttttttatctccaaggtgcgattttgagttatttcaagtcattctaagccaatttcaatcacaaaaagaa 29760703  T
Q  444 gtaa 447  Q
    ||||    
T  29760704 gtaa 29760707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 22397753 - 22397867
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||| ||||||||| | | ||  | |||| |||||||||||||||||||||||  || |||||||||  || |||| ||||| || ||| || ||    
T  22397753 tgagaattgttgttcccacgtatagtaaggctgtgccacacgagtaaaataccaaaatacccttcggcagttaactgccgaagttttgagtaaaccggcg 22397852  T
Q  247 gtagttaactgccga 261  Q
    | |||||||||||||    
T  22397853 gcagttaactgccga 22397867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 23344398 - 23344345
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||| |||||||||  ||||||||||||||||||| ||||||| |||||||    
T  23344398 tgttatatgaacagaacaacataggagtttccaaaacttcattgttacgttttt 23344345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 332 - 377
Target Start/End: Original strand, 39855578 - 39855623
Alignment:
Q  332 gaacagaactgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||    
T  39855578 gaacaaaacagcataggagtttccaaaactccattgttacgttttt 39855623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 350 - 447
Target Start/End: Complemental strand, 41804000 - 41803903
Alignment:
Q  350 gtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaagtaa 447  Q
    |||| ||||||||||||||| | ||||| ||| | | |||||||||||||||  |||||||| ||||  |||||||||| ||||| ||| | ||||||    
T  41804000 gttttcaaaactccattgttacattttttattctcctaggtgcaattttgagcaatttgaagtcattccaagccaatttcaatcacaaaaataagtaa 41803903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 542 - 586
Target Start/End: Complemental strand, 13974512 - 13974468
Alignment:
Q  542 ttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||    
T  13974512 ttgattttatgatatgttaggatagttttggttagaattgttaga 13974468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 19159624 - 19159688
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| |||| |  |||||||| |||||||  ||||||| ||||||||||||||||    
T  19159624 agttaactgccgaaattttgaaaaatccggctgcagttaactgccaaggaaaacctcggtagtta 19159688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 37779993 - 37779945
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgttgcg 372  Q
    ||||||| |||||||||  ||||||||||| ||||||||||||||||||    
T  37779993 tgttatatgaacagaacaacataggagtttacaaaactccattgttgcg 37779945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 3728745 - 3728800
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| | |||||||||||||  |||| || ||||||||||||||||    
T  3728745 ccgaagtttttaggcaaccggcggcagttaactgccgaggaaaacctcggtagtta 3728800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Original strand, 3943984 - 3944039
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||| ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  3943984 ccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 3944039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 26879358 - 26879303
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| | |||||||||||||  |||| || ||||||||||||||||    
T  26879358 ccgaagtttttaggcaaccggcggcagttaactgccgaggaaaacctcggtagtta 26879303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 313
Target Start/End: Complemental strand, 29622487 - 29622432
Alignment:
Q  258 ccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||| |||| |||||||||||||  |||| || ||||||||||||||||    
T  29622487 ccgaagttttttggaaaccggcggcagttaattgccgaggaaaacctcggtagtta 29622432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 2365168 - 2365282
Alignment:
Q  147 tgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacg 246  Q
    ||||||||| ||||||||||  | ||||| |||| |||||||||||||  ||| ||||| || |||||||||  || |||| |||||||| ||| || ||    
T  2365168 tgagaattgttgttcccacaattggtttggctgtgccacacgagtaaatgacctaaatgcccttcggcagttaactgccgaagtttttagtaaaccggcg 2365267  T
Q  247 gtagttaactgccga 261  Q
    | || ||||| ||||    
T  2365268 gcagctaactaccga 2365282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 3983088 - 3983126
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  3983088 agttaactgccgaggtttttaggaaaccggcggcagtta 3983126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 3993901 - 3993851
Alignment:
Q  263 gtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  3993901 gtttttaggaaaccggcggcagttaactgccgaggaaaacctcggtagtta 3993851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 377
Target Start/End: Original strand, 14172167 - 14172221
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||| | |||||||||||||||||||  |||||| |||||||    
T  14172167 tgttataagaacagaacagacataggagtttccaaaactttattgttacgttttt 14172221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 14172373 - 14172427
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  |||||| |||||||||| ||||| ||||||||||||| ||||||    
T  14172373 tattgattttatgatttcatgatatgttaggataatttaggttagaattgttaga 14172427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 26497880 - 26497826
Alignment:
Q  324 tgttataagaacagaac-tgcataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||| | ||||| |||||||||||||||| |||| |||||||    
T  26497880 tgttataagaacagaacatacatagaagtttccaaaactccagtgttacgttttt 26497826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 31945933 - 31945895
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagtta 287  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  31945933 agttaactgccgaggtttttaggaaaccggcggcagtta 31945895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 532 - 586
Target Start/End: Complemental strand, 36911468 - 36911414
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  |||||| |||||||||| ||||| ||||||||||||| ||||||    
T  36911468 tattgattttatgatttcatgatatgttaggataatttaggttagaattgttaga 36911414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 377
Target Start/End: Original strand, 38043550 - 38043584
Alignment:
Q  343 cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||||||||||||| |||||||    
T  38043550 cataggagtttccaaaactccattgttacgttttt 38043584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 586
Target Start/End: Complemental strand, 51271386 - 51271344
Alignment:
Q  544 gattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  51271386 gattttatgatatgttaggataatttaggttagaattgttaga 51271344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 372
Target Start/End: Original strand, 16530651 - 16530680
Alignment:
Q  343 cataggagtttccaaaactccattgttgcg 372  Q
    ||||||||||||||||||||||||||||||    
T  16530651 cataggagtttccaaaactccattgttgcg 16530680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 372
Target Start/End: Original strand, 24268712 - 24268741
Alignment:
Q  343 cataggagtttccaaaactccattgttgcg 372  Q
    ||||||||||||||||||||||||||||||    
T  24268712 cataggagtttccaaaactccattgttgcg 24268741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 26633606 - 26633727
Alignment:
Q  324 tgttataagaacagaac-tgcataggagtttccaaaactccattgttgcg-tttttaatttttcaaggtgcaattttgagtcatttgaagccattagaag 421  Q
    ||||||||| ||||||| | ||| |||||||||||||||||| |||| || ||||| ||| | | || ||| ||||||||  |||||||| ||||  |||    
T  26633606 tgttataagtacagaacatacattggagtttccaaaactccaatgttacgtttttttattctcctagatgcgattttgagcaatttgaagtcattccaag 26633705  T
Q  422 ccaattttaatcataaatacaa 443  Q
    ||||||| ||||| ||| ||||    
T  26633706 ccaatttcaatcacaaaaacaa 26633727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 175
Target Start/End: Complemental strand, 30910144 - 30910115
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttg 175  Q
    ||||||||||||||||||||||||||||||    
T  30910144 ttgagaattgctgttcccacatgttgtttg 30910115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 39063290 - 39063339
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcg 372  Q
    ||||||||||||||||| | |||| |||||||||||||| ||||||||||    
T  39063290 tgttataagaacagaacagacataagagtttccaaaacttcattgttgcg 39063339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 13149036 - 13148995
Alignment:
Q  324 tgttataagaacagaactgcataggagtttccaaaactccattgtt 369  Q
    |||||||||||||||    |||||||||||||||||||||||||||    
T  13149036 tgttataagaacaga----cataggagtttccaaaactccattgtt 13148995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 326 - 377
Target Start/End: Complemental strand, 13287543 - 13287491
Alignment:
Q  326 ttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||| ||||||||| | ||||||||||| ||||| |||||||||||||||||    
T  13287543 ttatatgaacagaacagacataggagttttcaaaattccattgttgcgttttt 13287491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 13636194 - 13636130
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||| |||| |  |||||||| |||||||  |||| || ||||||||||||||||    
T  13636194 agttaactgccgaaattttgaaaaatccggctgcagttaactgccgaggaaaacctcggtagtta 13636130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 377
Target Start/End: Complemental strand, 17373954 - 17373926
Alignment:
Q  349 agtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||||||||||||||||    
T  17373954 agtttccaaaactccattgttgcgttttt 17373926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 29622585 - 29622545
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccaca 186  Q
    ||||| |||||||||||||||||||||||| |||| |||||    
T  29622585 ttgagtattgctgttcccacatgttgtttggctgtgccaca 29622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 43011760 - 43011832
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtt 218  Q
    |||||||||| ||||||||| | | ||||| |||| ||||||||||||| |||  ||||  ||||||||||||    
T  43011760 ttgagaattgttgttcccacttttggtttggctgtgccacacgagtaaattactcaaatacccctcggcagtt 43011832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 532 - 595
Target Start/End: Original strand, 49925155 - 49925216
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttagg 595  Q
    |||||||||  |||||| |||||||  | ||||||||||||||| || ||||||||||||||||    
T  49925155 tattgattttatgatttaatgatat--taggatagtttaggttataaaggttagaattgttagg 49925216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 106; Significance: 1e-52; HSPs: 4)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 249 - 447
Target Start/End: Original strand, 5332 - 5534
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta----ccgaggagaatgttataagaacagaactgca 344  Q
    ||||||||||||||||||  ||||| |||||||||||||  |||| || ||||||||||||||||    ||||||| |||||||||||||||  ||  ||    
T  5332 agttaactgccgaagtttgaaggaaaccggcggcagttaactgccgaggaaaacctcggtagttaactgccgaggaaaatgttataagaacaacacaaca 5431  T
Q  345 taggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataaatacaag 444  Q
    ||||||||||||||||||||||||||||||||| | | | |||| |||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  5432 taggagtttccaaaactccattgttgcgttttttagtatccaagttgcaattttgagtcatttgaagccattacaagccaatttcaatcataaaaacaag 5531  T
Q  445 taa 447  Q
    |||    
T  5532 taa 5534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 576
Target Start/End: Original strand, 5597 - 5649
Alignment:
Q  524 ttcgattatattgatttgttgattttatgatatgtttggatagtttaggttag 576  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5597 ttcgattatattgatttgttgattttatgatattttaggatagtttaggttag 5649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 236
Target Start/End: Complemental strand, 11594 - 11504
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttag 236  Q
    |||||||||| ||||||||||| | ||||| |||| ||||||||||||| |||| ||||| || |||||||||  || |||| ||||||||    
T  11594 ttgagaattgttgttcccacatttggtttggctgtgccacacgagtaaattacctaaatgcccttcggcagttaactgccgaagtttttag 11504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 632
Target Start/End: Original strand, 5631 - 5671
Alignment:
Q  591 ttaggatagtttaggttagtatagggttgaattgatcgccat 632  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  5631 ttaggatagtttaggttagtata-ggttgaattgatcgccat 5671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 338 - 447
Target Start/End: Complemental strand, 183 - 74
Alignment:
Q  338 aactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagccattagaagccaattttaatcataa 437  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| ||| |||||||||||| ||    
T  183 aactgcataggagtttccaaaactccattgttgcgtttttaattatccaaggtgcgattttgagtcatttgaagccattacaagtcaattttaatcacaa 84  T
Q  438 atacaagtaa 447  Q
    | ||||||||    
T  83 aaacaagtaa 74  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 80; Significance: 3e-37; HSPs: 4)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 314 - 445
Target Start/End: Complemental strand, 656 - 525
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||| |    
T  656 ccgaggaaaatgttataagaacagaacatcataggagtttccaaaactccattgttgcgttttttattatccaaggtgcgattttgagtcatttgaagtc 557  T
Q  414 attagaagccaattttaatcataaatacaagt 445  Q
    |||  |||||||||| ||||| ||| ||||||    
T  556 attccaagccaatttcaatcacaaaaacaagt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 514 - 586
Target Start/End: Complemental strand, 460 - 388
Alignment:
Q  514 attatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  460 attatataggttcgattatattgatttgttgattttatgatatgttaggatagtttaggttagaattgttaga 388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 314 - 447
Target Start/End: Complemental strand, 3587 - 3453
Alignment:
Q  314 ccgaggagaatgttataagaacagaactg-cataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagc 412  Q
    ||||||| ||||||||||||| | ||| | ||||||||||||||||||||||||||||||||||| ||| | |  | ||| ||||||||  |||| ||||    
T  3587 ccgaggaaaatgttataagaatataacagacataggagtttccaaaactccattgttgcgttttttattctccttgctgcgattttgagcaatttaaagc 3488  T
Q  413 cattagaagccaattttaatcataaatacaagtaa 447  Q
    ||||  |||||||||| ||||| ||| ||||||||    
T  3487 cattccaagccaatttcaatcacaaaaacaagtaa 3453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 3384 - 3318
Alignment:
Q  512 cgattatataggttcgattatattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||||||||||||||||||||||        ||||||||||| ||||| ||||||||||||| ||||||    
T  3384 cgattatataggttcgattatattgattt--------tatgatatgttaggataatttaggttagaattgttaga 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 314 - 447
Target Start/End: Original strand, 10748 - 10881
Alignment:
Q  314 ccgaggagaatgttataagaacagaactgcataggagtttccaaaactccattgttgcgtttttaatttttcaaggtgcaattttgagtcatttgaagcc 413  Q
    ||||||| ||||||||||||||| ||  |||||||||||||||||||| ||||||||||||||| ||| | |||||||| |||||||||||||||||  |    
T  10748 ccgaggaaaatgttataagaacataatagcataggagtttccaaaacttcattgttgcgttttttattatccaaggtgcgattttgagtcatttgaattc 10847  T
Q  414 attagaagccaattttaatcataaatacaagtaa 447  Q
    |||  |||||||||| ||||| ||| ||||||||    
T  10848 attttaagccaatttcaatcacaaaaacaagtaa 10881  T

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Target: scaffold0199; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 12459 - 12396
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||||||||||||| || |||||||| |||||||  |||| |  ||||||||||||||||    
T  12459 agttaactgccgaagtttt-agaaatccggctgcagttaactgccgatgaaaacctcggtagtta 12396  T

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Target: scaffold1606 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 100 - 9
Alignment:
Q  148 gagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaa 239  Q
    |||||||| ||||||||||| | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  100 gagaattgttgttcccacatatagtttggctgtgccacacgagtaaaataccaaaatgcccctcggcagtttgctaccgaggtttttaggaa 9  T

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Target: scaffold0101 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 146 - 313
Target Start/End: Complemental strand, 41197 - 41030
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||||||||||||||| | || || |||| ||||||||||||||||| |||||  || |||||||||  ||||||| |||| ||| ||| || |    
T  41197 ttgagaattgctgttcccacatatagtatggctgtgccacacgagtaaaatactaaaatacccttcggcagttaactaccgaagtttgtagtaaaccggc 41098  T
Q  246 ggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    || || | ||| |||| ||||||||||| |||||||||||||  |||| || |||||||||| |||||    
T  41097 ggcagcttactaccgaggtttttaggaaaccggcggcagttaactgccgaggaaaacctcgggagtta 41030  T

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Target: scaffold0192 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 532 - 594
Target Start/End: Original strand, 16688 - 16750
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttagaattgttag 594  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16688 tattgattttatgattttatgatatgttaggatagtttaggttagaatggttagaattgttag 16750  T

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Target: scaffold0293 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 245 - 313
Target Start/End: Complemental strand, 798 - 730
Alignment:
Q  245 cggtagttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  |||| || ||||||||||||||||    
T  798 cggtagtaaactgccgaagtttttaggaaaccggcggcagttaactgcccaggaaaacctcggtagtta 730  T

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Target: scaffold0293; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 858 - 750
Alignment:
Q  151 aattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgacggtag 250  Q
    ||||| ||||||||||| | || || |||| ||||| |||||||||||  ||||| || |||| |||   || |||| |||||||||||| || ||| ||    
T  858 aattgttgttcccacatatagtatggctgtgccacatgagtaaaatacggaaatgcccttcggtagtaaactgccgaagtttttaggaaaccggcggcag 759  T
Q  251 ttaactgcc 259  Q
    |||||||||    
T  758 ttaactgcc 750  T

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Target: scaffold0744 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 563 - 449
Alignment:
Q  146 ttgagaattgctgttcccacatgttgtttgactgtaccacacgagtaaaataccaaaatgtccctcggcagtttgctaccgaggtttttaggaaatcgac 245  Q
    |||||||||| ||||||||||| | || ||  ||| |||||| |||||||||| |||||| || |||||||||||||||| | ||||||| |||| || |    
T  563 ttgagaattgttgttcccacatatagtatggttgtgccacaccagtaaaatacgaaaatgcccttcggcagtttgctacc-aagtttttaagaaaccggc 465  T
Q  246 ggtagttaactgccga 261  Q
    || |||||||||||||    
T  464 ggcagttaactgccga 449  T

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Target: scaffold0744; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 483 - 431
Alignment:
Q  261 aagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    ||||||||| ||| |||||||||||||  |||| || ||||||||||||||||    
T  483 aagtttttaagaaaccggcggcagttaactgccgaggaaaacctcggtagtta 431  T

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Target: scaffold0859 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 324 - 377
Target Start/End: Complemental strand, 2161 - 2107
Alignment:
Q  324 tgttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| |||||    
T  2161 tgttataagaacagaacagacataggagtttccaaaactccattgttgcattttt 2107  T

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Target: scaffold0038 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 50048 - 50112
Alignment:
Q  249 agttaactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||| |||||||||||||||| | |||||||||||||  |||| || ||||||||||||||||    
T  50048 agttaaatgccgaagtttttagggaaccggcggcagttaactgccgaggaaaacctcggtagtta 50112  T

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Target: scaffold0618 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 532 - 586
Target Start/End: Original strand, 4175 - 4229
Alignment:
Q  532 tattgatttgttgattttatgatatgtttggatagtttaggttagaatggttaga 586  Q
    |||||||||  ||||||||||||||||| | ||||||||||||||||| ||||||    
T  4175 tattgattttatgattttatgatatgttagaatagtttaggttagaattgttaga 4229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 3965 - 4018
Alignment:
Q  325 gttataagaacagaactg-cataggagtttccaaaactccattgttgcgttttt 377  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||||| ||||    
T  3965 gttataagaacagaacagacataggagtttccaaaacttcattgttgcggtttt 4018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 324 - 371
Target Start/End: Complemental strand, 154415 - 154366
Alignment:
Q  324 tgttataagaacagaactgca--taggagtttccaaaactccattgttgc 371  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||    
T  154415 tgttataagaacagaacagcacataggaatttccaaaactccattgttgc 154366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 7423 - 7483
Alignment:
Q  253 aactgccgaagtttttaggaatccggcggcagttaggtgccaagtaaaacctcggtagtta 313  Q
    |||||||||||||||||| || ||||||||||||   | || || ||||||||||||||||    
T  7423 aactgccgaagtttttagtaacccggcggcagttgactaccgaggaaaacctcggtagtta 7483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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