View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0091_low_13 (Length: 256)
Name: NF0091_low_13
Description: NF0091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0091_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 228
Target Start/End: Complemental strand, 24169254 - 24169037
Alignment:
| Q |
11 |
cagagagtcacagggaaactcgcttccaactggccacaacgaattcacaagaaaaaggcaactcgcttaaggaagaaaactccagagagtctcaatttat |
110 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24169254 |
cagagagtcacagggaaactcgcttccaactggccacaacgaattcacaagaaaaaggcaactcgcttaaggaagaaaactccagagagtctcaatttat |
24169155 |
T |
|
| Q |
111 |
aggcttctcagctcgcttccaacatgccaaagcgagttcatcnnnnnnntatgtcaaacaatactcgttttgaaatgaattgagtattagggtgaccaac |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24169154 |
aggcttctcagctcgcttccaacatgccaaagcgagttcatcaaaaaaatatgtcaaacaatactcgttttgaaatgaattgagtattagggtgaccaac |
24169055 |
T |
|
| Q |
211 |
cttgtgattcaaaatggt |
228 |
Q |
| |
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|||||||||||||||||| |
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| T |
24169054 |
cttgtgattcaaaatggt |
24169037 |
T |
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