View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0091_low_4 (Length: 342)
Name: NF0091_low_4
Description: NF0091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0091_low_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 18)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 28 - 329
Target Start/End: Original strand, 26088185 - 26088486
Alignment:
| Q |
28 |
catagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggctt |
127 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
26088185 |
catagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaattaggctt |
26088284 |
T |
|
| Q |
128 |
gataatgctcagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaaca |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26088285 |
gataatgctcagattgtagaaattgcacacggtctcgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaaca |
26088384 |
T |
|
| Q |
228 |
ctttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaac |
327 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26088385 |
ctttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcatcctgcaac |
26088484 |
T |
|
| Q |
328 |
ag |
329 |
Q |
| |
|
|| |
|
|
| T |
26088485 |
ag |
26088486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 28 - 329
Target Start/End: Original strand, 26111973 - 26112274
Alignment:
| Q |
28 |
catagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggctt |
127 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
26111973 |
catagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaattaggctt |
26112072 |
T |
|
| Q |
128 |
gataatgctcagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaaca |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26112073 |
gataatgctcagattgtagaaattgcacacggtctcgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaaca |
26112172 |
T |
|
| Q |
228 |
ctttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaac |
327 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26112173 |
ctttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcatcctgcaac |
26112272 |
T |
|
| Q |
328 |
ag |
329 |
Q |
| |
|
|| |
|
|
| T |
26112273 |
ag |
26112274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 37 - 329
Target Start/End: Original strand, 26155600 - 26155892
Alignment:
| Q |
37 |
gcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgataatgct |
136 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
26155600 |
gcttggaaaagaggccgagtggttaaattggcttaacacaaagcaaaatgagtccgtattgtatgtaagttttggaagtctaactaggcttgataatgct |
26155699 |
T |
|
| Q |
137 |
cagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttc |
236 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| |
|
|
| T |
26155700 |
cagattgtagaaattgcacacggtctcgaaaattcaggtcataattttatctgggttgtaaggaaaaaggagagcgatgagagtgaaaacactttccttc |
26155799 |
T |
|
| Q |
237 |
aagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
26155800 |
aagattttgaggaaaggatgaaagaaagcaaaaagggatatatcatatggaattgggcaccacagcttctgatattggatcaccctgcaacag |
26155892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 30 - 329
Target Start/End: Complemental strand, 19103289 - 19102990
Alignment:
| Q |
30 |
tagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttga |
129 |
Q |
| |
|
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
19103289 |
tagaggagatcggaaaagaggaagagtggctaaattggcttaactcaaagcaaaatgagtctgtattgtatgtaagttttggaagtctaactaggcttga |
19103190 |
T |
|
| Q |
130 |
taatgctcagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacact |
229 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | |
|
|
| T |
19103189 |
aaatgatcagattgtagaaatcgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaaaatgagagagatgagagtgaaaacagt |
19103090 |
T |
|
| Q |
230 |
ttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
|| || ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
19103089 |
tttctacaagattttgaggcaaggatgaaagaaagcaaaaagggatatatcatatggaattgggcaccgcaacttctgatattggatcaccctgcaacag |
19102990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 28 - 324
Target Start/End: Original strand, 26128970 - 26129266
Alignment:
| Q |
28 |
catagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggctt |
127 |
Q |
| |
|
||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
26128970 |
catagaggagcttggaaaagaggcagactggttaaattggcttaactcaaagcaaaatgagtccgtactgtatgtaagttttggaagtctaactaggctt |
26129069 |
T |
|
| Q |
128 |
gataatgctcagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaaca |
227 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| | ||||| |||||||||||||||| |
|
|
| T |
26129070 |
gataatgctcagattgtagaaattgcacacggtctcgaaaattcaggtcataattttatatgggttgtaaggaaaaaggagagcgatgagagtgaaaaca |
26129169 |
T |
|
| Q |
228 |
ctttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgc |
324 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
26129170 |
atttccttcaagattttgaggaaaggatgaaagaaagaaaaaagggctatatcatatggaattgggcaccacagctccttatattggatcaccctgc |
26129266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 32 - 329
Target Start/End: Original strand, 26186649 - 26186952
Alignment:
| Q |
32 |
gaggagcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgata |
131 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||| ||||| ||||||||| |
|
|
| T |
26186649 |
gaggagcttgcagaagaggaagagtggctaaattggcttaactcaaagcaaattgagtccgtactgtatttaagttttggaagtgtaactaggcttgata |
26186748 |
T |
|
| Q |
132 |
atgctcagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttg-------taaggaaatatgagagggatgagagtgaaa |
224 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | || || ||||||||||||| |
|
|
| T |
26186749 |
atgctcagattgtagaaattgcacacggtcttgaaaattcagatcataattttatctgggttgtaacttataaggaaaaaggaaagagatgagagtgaaa |
26186848 |
T |
|
| Q |
225 |
acactttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgc |
324 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26186849 |
acactttcctacaagattttga-gaaagaatgaaagaaagcaaaaagggatatatcatatggaattgggcaccacagcttctgatattggatcaccctgc |
26186947 |
T |
|
| Q |
325 |
aacag |
329 |
Q |
| |
|
||||| |
|
|
| T |
26186948 |
aacag |
26186952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 28 - 329
Target Start/End: Original strand, 26191668 - 26191969
Alignment:
| Q |
28 |
catagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggctt |
127 |
Q |
| |
|
|||||||||| |||||||| || |||||||||||||||||||||||||||| |||||||||| ||| | |||||||| ||||||||| ||||| |||| |
|
|
| T |
26191668 |
catagaggagaatggaaaagtggcagagtggctaaattggcttaactcaaagcaaaatgagtctgtactttatgtaagctttggaagtttaactaggcta |
26191767 |
T |
|
| Q |
128 |
gataatgctcagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaaca |
227 |
Q |
| |
|
| |||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| |
|
|
| T |
26191768 |
actcatgctcagcttgtagaaattgcacatgggcttgaaaattcaggtcataattttatctgggttgtaaggaaaaatgatatggatgagagtgaaaaca |
26191867 |
T |
|
| Q |
228 |
ctttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaac |
327 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
26191868 |
gtttcctacaagattttgagggaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacagcttcagatattggatcaccctgcaac |
26191967 |
T |
|
| Q |
328 |
ag |
329 |
Q |
| |
|
|| |
|
|
| T |
26191968 |
ag |
26191969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 28 - 329
Target Start/End: Original strand, 26179486 - 26179787
Alignment:
| Q |
28 |
catagaggagcttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggctt |
127 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| || || | || || |
|
|
| T |
26179486 |
catagaggaacttggaaaagaggaagaatggctaaattggcttaactcaaagcaaaatgagtctgtattatatgtaagttttggtagccttgttaggttt |
26179585 |
T |
|
| Q |
128 |
gataatgctcagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaaca |
227 |
Q |
| |
|
|||||||| ||||||||||||| ||||| |||||||| |||||||| ||||||||||||||| ||| |||||||| | ||||| || | | |
|
|
| T |
26179586 |
ccgcatgctcagcttgtagaaattgcgcacgggcttgaaaactcaggtcaaaattttatctgggttataaaaaaatatgataaagatgaagatggagaag |
26179685 |
T |
|
| Q |
228 |
ctttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaac |
327 |
Q |
| |
|
|||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
26179686 |
gtttcctgcaagaatttgaggaaaggttgaaagaaagcaaaaagggctatatcatatggaattgggcatcacaacttctgatattagatcaccctgcaac |
26179785 |
T |
|
| Q |
328 |
ag |
329 |
Q |
| |
|
|| |
|
|
| T |
26179786 |
ag |
26179787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 62 - 329
Target Start/End: Original strand, 26251285 - 26251552
Alignment:
| Q |
62 |
aattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgataatgctcagattgtagaaattgcacacggtc |
161 |
Q |
| |
|
|||||||||||||| ||| |||||||||| |||||||||||||||||||| || || ||| ||||| | |||||||| |||||||||||||||| || | |
|
|
| T |
26251285 |
aattggcttaactcgaagcaaaatgagtcagtattgtatgtaagttttggcagccttactaggcttcctcatgctcagcttgtagaaattgcacatgggc |
26251384 |
T |
|
| Q |
162 |
ttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaaga |
261 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| ||| |||| | |||||| || | | ||| | ||| | |||||||||||||||||||| |
|
|
| T |
26251385 |
ttgaaaattcaggtcataattttatctgggttataaaaaaagatgataaagatgaggatggagaaggttttttgcaaaaatttgaggaaaggatgaaaga |
26251484 |
T |
|
| Q |
262 |
aagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26251485 |
aagcaacaagggctatatcatctggaattgggcaccacaacttctgatattggatcaccctgcaacag |
26251552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 60 - 329
Target Start/End: Original strand, 26302244 - 26302513
Alignment:
| Q |
60 |
taaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgataatgctcagattgtagaaattgcacacgg |
159 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| || || | ||| | | |||||||| ||||||||||||||||||| |
|
|
| T |
26302244 |
taaattggcttaactcaaagcaaaatgagtctgtattgtatgtaagttttggcagccttgtttggcatcctcatgctcagcttgtagaaattgcacacgg |
26302343 |
T |
|
| Q |
160 |
tcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaa |
259 |
Q |
| |
|
||||||||||||||||||| |||||| ||||| ||| | |||||||| || ||||| |||| | |||||| |||| |||||||||||||||||| |
|
|
| T |
26302344 |
gcttgaaaattcaggtcatagttttatttgggtcgtacgaaaatatgatagaaatgaggatgaagaaggtttcctgcaagtatttgaggaaaggatgaaa |
26302443 |
T |
|
| Q |
260 |
gaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
26302444 |
gaaagcaaaaaaggctatatcatatggaattgggcaccgcagcttctaatattggatcaccctgcaacag |
26302513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 58 - 328
Target Start/End: Original strand, 26242833 - 26243103
Alignment:
| Q |
58 |
gctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgataatgctcagattgtagaaattgcacac |
157 |
Q |
| |
|
|||||||||||||||| ||| |||||||||| |||||||||||||||||||| || | ||| || || | |||||||| ||||||||||||| ||| |
|
|
| T |
26242833 |
gctaaattggcttaacctgaagcaaaatgagtctgtattgtatgtaagttttggcagccagactaggtttcctcatgctcagcttgtagaaattgctcac |
26242932 |
T |
|
| Q |
158 |
ggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatga |
257 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||| ||| |||| | | |||| || | | |||||| ||||| |||||||||||||||| |
|
|
| T |
26242933 |
gggcttgaaaattcaggtcataattttatctgggttataaaaaaagatgataaagttgaggatggagaaggtttcctgcaagaatttgaggaaaggatga |
26243032 |
T |
|
| Q |
258 |
aagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaaca |
328 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
26243033 |
aagaaagcaacaagggctatatcatatgggactgggcaccgcaacttctgatattggatcacccagcaaca |
26243103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 39 - 329
Target Start/End: Original strand, 26204299 - 26204589
Alignment:
| Q |
39 |
ttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgataatgctca |
138 |
Q |
| |
|
|||||||||| |||| | | ||||||||||||| || |||||||| ||||| || |||||||||||||||||||| || ||| ||||| | ||| || |
|
|
| T |
26204299 |
ttggaaaagatcaagaattggtaaattggcttaattctaaggaaaacgagtctgtgttgtatgtaagttttggaagccttactaggctttctcatgaaca |
26204398 |
T |
|
| Q |
139 |
gattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaa |
238 |
Q |
| |
|
||||| ||||| || || |||||||||||||| ||||||||||| || |||||||| || || | || | ||||| ||||| | ||| || | |
|
|
| T |
26204399 |
gattgctgaaatagctcatggtcttgaaaattctggtcataatttcatttgggttgttagagaaaaggataaagatgatggtgaagaaggttttctgata |
26204498 |
T |
|
| Q |
239 |
gattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
26204499 |
gattttgagaaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggccccacagcttctgatattggatcaccctgcaacag |
26204589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 60 - 329
Target Start/End: Original strand, 26260307 - 26260576
Alignment:
| Q |
60 |
taaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgataatgctcagattgtagaaattgcacacgg |
159 |
Q |
| |
|
|||||||||||||||| || ||||| || || |||||||||||||||||||| | ||| ||||| | |||||||| |||| ||||| || || || |
|
|
| T |
26260307 |
taaattggcttaactctaaccctaatgattctgtgttgtatgtaagttttggaagcttgactaggctttcttatgctcaggttgttgaaatagctcatgg |
26260406 |
T |
|
| Q |
160 |
tcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgaga-gtgaaa-acactttccttcaagattttgaggaaaggatga |
257 |
Q |
| |
|
||||||||||||||||||||||| || |||||||| |||||| | ||| ||| | || || ||| ||| ||| ||||| ||||||||| ||||||||| |
|
|
| T |
26260407 |
acttgaaaattcaggtcataatttcatttgggttgttaggaaaaa--agacggaggcgaagtcaaagacagttttcttcatgattttgagcaaaggatga |
26260504 |
T |
|
| Q |
258 |
aagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| |
|
|
| T |
26260505 |
aagaaagcaaaaagggctatatcatatggaattgggcaccacagctccttatattggatcaccctgcaacag |
26260576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 58 - 329
Target Start/End: Original strand, 26297881 - 26298152
Alignment:
| Q |
58 |
gctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgataatgctcagattgtagaaattgcacac |
157 |
Q |
| |
|
||||||||||||||| || ||||||||||| || |||||||||||||||||||| || | ||| ||||| | |||||||| |||||||||||| || |
|
|
| T |
26297881 |
gctaaattggcttaattcgaaggaaaatgaatctgtattgtatgtaagttttggcagctttactaggcttccttatgctcagcttgtagaaattgttcat |
26297980 |
T |
|
| Q |
158 |
ggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatga |
257 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||| | |||| | |||||| || | | ||| || ||||| |||||||||||||| | |
|
|
| T |
26297981 |
gggcttgaaaattcaggtcataattttatctgggttataaaaagggatgatacagatgaggatggagaaggttttctgcaagaatttgaggaaaggatta |
26298080 |
T |
|
| Q |
258 |
aagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
||||||||| |||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
26298081 |
aagaaagcagcaagggctatatcatatgggactgggcaccgcaacttctgatattggaccaccctgcaacag |
26298152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 39 - 329
Target Start/End: Original strand, 26223937 - 26224226
Alignment:
| Q |
39 |
ttggaaaagaggaagagtggctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgataatgctca |
138 |
Q |
| |
|
|||||||||| |||| | | ||||||||||||| || |||||||| ||||| || |||||||||||||||||||| || ||| ||||| | ||| || |
|
|
| T |
26223937 |
ttggaaaagatcaagaattggtaaattggcttaattctaaggaaaacgagtctgtgttgtatgtaagttttggaagccttactaggctttctcatgaaca |
26224036 |
T |
|
| Q |
139 |
gattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaa |
238 |
Q |
| |
|
||||| ||||| || || |||||||||||||| ||||||||||| || |||||||| || || | || | ||||| ||||| | ||| || | |
|
|
| T |
26224037 |
gattgctgaaatagctcatggtcttgaaaattctggtcataatttcatttgggttgttagagaaaaggataaagatgatggtgaagaaggttttctgata |
26224136 |
T |
|
| Q |
239 |
gattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
26224137 |
gattt-gagaaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggccccacagcttctgatattggatcaccctgcaacag |
26224226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 93 - 326
Target Start/End: Original strand, 26278167 - 26278397
Alignment:
| Q |
93 |
tattgtatgtaagttttggaagtctaactgggcttgataatgctcagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggt |
192 |
Q |
| |
|
||||||||||||| ||||| || || | | ||||| | |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
26278167 |
tattgtatgtaagctttggcagccttattaggcttcctcatgctcagcttgtagaaattgcacacgggcttgaaaattcaggtcataattttatctgggt |
26278266 |
T |
|
| Q |
193 |
tgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgg |
292 |
Q |
| |
|
| ||| || || | | |||||| || | | |||||| ||||| |||||| ||||||||||||||||||| |||||||| ||||||||| ||||| |
|
|
| T |
26278267 |
tataa---aaaataataaagatgaggatggagaaggtttcctgcaagaatttgagaaaaggatgaaagaaagcaacaagggctacatcatatgggattgg |
26278363 |
T |
|
| Q |
293 |
gcaccacaacttctgatattggatcaccctgcaa |
326 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| |
|
|
| T |
26278364 |
gcaccacaactgctgatattggaataccctgcaa |
26278397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 137 - 330
Target Start/End: Original strand, 26227484 - 26227677
Alignment:
| Q |
137 |
cagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagt-gaaaacactttcctt |
235 |
Q |
| |
|
|||||||||||||| || || |||||||||||||||||||||||||| || |||||||| |||||| | || | || | ||| ||| || || ||| |
|
|
| T |
26227484 |
cagattgtagaaatagctcatggtcttgaaaattcaggtcataatttcatttgggttgttaggaaaaaagatggagaag-gagacgaagacgggtttctt |
26227582 |
T |
|
| Q |
236 |
caagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacagc |
330 |
Q |
| |
|
| |||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |
|
|
| T |
26227583 |
gatgattttaagcaaaggatgaaagaaaacaaaaagggatatatcatatggaattgggcaccacaacttctcatattaggtcaccctgcaacagc |
26227677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 329
Target Start/End: Original strand, 26207918 - 26208115
Alignment:
| Q |
132 |
atgctcagattgtagaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacacttt |
231 |
Q |
| |
|
||||||||||||||||||| || || ||||| |||||||| ||||||||||| || |||||||| |||||| | || | || | ||||| | ||| |
|
|
| T |
26207918 |
atgctcagattgtagaaatagctcatggtctggaaaattccggtcataatttcatttgggttgttaggaaaaaagatggagaaggaggtgaagatggttt |
26208017 |
T |
|
| Q |
232 |
ccttcaagattttgaggaaaggatgaaagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
||| |||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||| |
|
|
| T |
26208018 |
tcttgaagattttaagcaaaggatgaaagaaaacaaaaagggatatatcatatggaattgggcaccacagcttctcatattaggccaccctgcaacag |
26208115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 58 - 329
Target Start/End: Original strand, 44903686 - 44903957
Alignment:
| Q |
58 |
gctaaattggcttaactcaaaggaaaatgagtccgtattgtatgtaagttttggaagtctaactgggcttgataatgctcagattgtagaaattgcacac |
157 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| || |||||||||||||||||||| || ||| |||| | |||||||| |||||||||||||||| |
|
|
| T |
44903686 |
gctaaattggcttaactcaaagcaaaatgagtctgtgttgtatgtaagttttggaagccttactaagctttttcatgctcagcttgtagaaattgcacat |
44903785 |
T |
|
| Q |
158 |
ggtcttgaaaattcaggtcataattttatctgggttgtaaggaaatatgagagggatgagagtgaaaacactttccttcaagattttgaggaaaggatga |
257 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||||||||||||||| |||| || || |||| || | |||||| |||||||||||||||||| ||| |
|
|
| T |
44903786 |
gggcttgaaaagtcaggtcataattttatctgggttgtaaggaaaaatgatagagacgagaacgaggaaggtttcctgcaagattttgaggaaagggtga |
44903885 |
T |
|
| Q |
258 |
aagaaagcaaaaagggctatatcatatggaattgggcaccacaacttctgatattggatcaccctgcaacag |
329 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
44903886 |
aagaaagcaacaagggctatatcatatggaattgggcaccgcagcttctcatattggatcaccctgcaacag |
44903957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 5995102 - 5995053
Alignment:
| Q |
146 |
gaaattgcacacggtcttgaaaattcaggtcataattttatctgggttgt |
195 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||| || |||||||| |
|
|
| T |
5995102 |
gaaattgcacatgcacttgaaaattcaggtcataatttcatttgggttgt |
5995053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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