View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0093_low_1 (Length: 420)
Name: NF0093_low_1
Description: NF0093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0093_low_1 |
 | |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 367; Significance: 0; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 30 - 412
Target Start/End: Original strand, 7581396 - 7581778
Alignment:
| Q |
30 |
aattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaa |
129 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7581396 |
aattctactttgccagctctgagattgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaa |
7581495 |
T |
|
| Q |
130 |
tcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatga |
229 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7581496 |
tcatgaaggaagaattgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatga |
7581595 |
T |
|
| Q |
230 |
attgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatca |
329 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7581596 |
attgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatca |
7581695 |
T |
|
| Q |
330 |
gtagtggtgcaagaatgtatggttttagagaatgcatgtttgacaaatatgtcaaaaagcacccttcatattagtttcatctc |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
7581696 |
gtagtggtgcaagaatgtatggttttagagaatgaatgtttgacaaatatgtcaaaaagcacccatcatattagtttcatctc |
7581778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 30 - 408
Target Start/End: Complemental strand, 7099850 - 7099472
Alignment:
| Q |
30 |
aattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaa |
129 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
7099850 |
aattctattttgccagctttgaggttgagctacttccatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcgcaaagatacaaaaa |
7099751 |
T |
|
| Q |
130 |
tcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatga |
229 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7099750 |
tcatgaaggaagaattgattcatctttggatggctaatggatttatttcatctagaaaaaatttggaggttgaagatgttggaaacatgatttggaatga |
7099651 |
T |
|
| Q |
230 |
attgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatca |
329 |
Q |
| |
|
||||| |||||| ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
7099650 |
attgtaccaaaaatctttctttcaagacatccatatggatgattattcaagagtgatttctttcaaaatgcatgatctcgtccatgatcttgctcaatca |
7099551 |
T |
|
| Q |
330 |
gtagtggtgcaagaatgtatggttttagagaatgcatgtttgacaaatatgtcaaaaagcacccttcatattagtttca |
408 |
Q |
| |
|
|||| || ||||||||||||||||||||| ||||||| | |||| || ||||||||||||| | |||||||||||||| |
|
|
| T |
7099550 |
gtaggggggcaagaatgtatggttttagataatgcatatgtgactaacttgtcaaaaagcacacatcatattagtttca |
7099472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 30 - 408
Target Start/End: Complemental strand, 17983336 - 17982958
Alignment:
| Q |
30 |
aattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaa |
129 |
Q |
| |
|
||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |
|
|
| T |
17983336 |
aattctattttcccagctctaaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcccaaagaagcagaaa |
17983237 |
T |
|
| Q |
130 |
tcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatga |
229 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17983236 |
tcatgaaagaagaactaattcatctttggatggctaataaatttatctcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatga |
17983137 |
T |
|
| Q |
230 |
attgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatca |
329 |
Q |
| |
|
||||| |||||| ||||||||||||||||| ||||| |||||| ||||||| | ||||||||||||||||| |||||| ||||||||||||||| |||| |
|
|
| T |
17983136 |
attgtaccaaaaatctttctttcaagacatccatattgatgattattcaagtgtgatttctttcaaaatgcacgatctcgtccatgatcttgctcaatca |
17983037 |
T |
|
| Q |
330 |
gtagtggtgcaagaatgtatggttttagagaatgcatgtttgacaaatatgtcaaaaagcacccttcatattagtttca |
408 |
Q |
| |
|
|||| || ||| |||||| |||||||||||||||||| | |||| || |||||||||| || | | |||||||||||| |
|
|
| T |
17983036 |
gtagcggggcatgaatgtgtggttttagagaatgcatctgtgactaacttgtcaaaaagtacacattatattagtttca |
17982958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 49 - 350
Target Start/End: Complemental strand, 30206932 - 30206631
Alignment:
| Q |
49 |
tgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatcatgaaggaagaactgat |
148 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||| | |||||||||||||||||||| ||||| ||||||||| || || ||| ||||||| |||| |
|
|
| T |
30206932 |
tgaggttgagctactttcatttaactccaaccttaaagcggtgtttcgctttttgtgctatgtttcccaaagatacagaattcgtgagggaagaattgat |
30206833 |
T |
|
| Q |
149 |
tcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgccaaaagtctttc |
248 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||| |||||| |
|
|
| T |
30206832 |
tcatctttggatggctaatgaatttattttatctagggaaaatatggaggttgaagatgttggcagcatggtttggaatgaattgtgccaaaaatctttc |
30206733 |
T |
|
| Q |
249 |
tttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagtagtggtgcaagaatgta |
348 |
Q |
| |
|
||||||||||| | ||||| | | ||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||| |||||||||| |
|
|
| T |
30206732 |
tttcaagacatcaagatggacaacggttctggagacatttctttcaagatgcatgatcttgtccatgatcttgctcaatcagtaatgggtcaagaatgta |
30206633 |
T |
|
| Q |
349 |
tg |
350 |
Q |
| |
|
|| |
|
|
| T |
30206632 |
tg |
30206631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 29 - 350
Target Start/End: Complemental strand, 29872604 - 29872283
Alignment:
| Q |
29 |
aaattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaa |
128 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| |||||| ||||| |||||||| |||| ||||||||| ||||||| ||||||||||| || |||| |||| |
|
|
| T |
29872604 |
aaattctattttgcttgctttgaggttgagttacttttatttaacaccaaccctaaagcaatgtttctctttttgcgctatatttcccaaggatagaaaa |
29872505 |
T |
|
| Q |
129 |
atcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatg |
228 |
Q |
| |
|
||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||| ||||||| | |
|
|
| T |
29872504 |
atcctgaaagaagaattgattcaactttggatggctaatgaatttatttcatctatgggtaatttggacgttgaagatgttggaaacatggtttggaagg |
29872405 |
T |
|
| Q |
229 |
aattgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatc |
328 |
Q |
| |
|
|||||| |||||| || ||||||||||| | |||||||| |||| |||||||||||||||| ||||||||||| |||||||||| |||| ||| |
|
|
| T |
29872404 |
aattgtaccaaaaatcattctttcaagatggcaagatggatgaatattctggagacatttctttcaagatgcatgatcttgtccatgatctcgctcaatc |
29872305 |
T |
|
| Q |
329 |
agtagtggtgcaagaatgtatg |
350 |
Q |
| |
|
| || ||| ||||||||||||| |
|
|
| T |
29872304 |
aataatggggcaagaatgtatg |
29872283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 29 - 365
Target Start/End: Complemental strand, 29853741 - 29853405
Alignment:
| Q |
29 |
aaattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaa |
128 |
Q |
| |
|
|||||||| ||||| ||| |||||||||| |||||| ||||| |||||||| |||||||||||||| | ||||| ||||||||||| || ||| | || |
|
|
| T |
29853741 |
aaattctattttgcttgctttgaggttgagttacttttatttaacaccaaccctaaaacaatgtttctccttttgcgctatatttcccaaggatggagaa |
29853642 |
T |
|
| Q |
129 |
atcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatg |
228 |
Q |
| |
|
||| |||| |||||| ||||||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| || ||| ||||||| | |
|
|
| T |
29853641 |
atcctgaaagaagaattgattcaactttggatggctaatggatttatttcatctaagggtaatttggacgttgaagatgttggaaatatggtttggaagg |
29853542 |
T |
|
| Q |
229 |
aattgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatc |
328 |
Q |
| |
|
|||||| ||||||||| ||||||||||| || | |||||||| | || ||||||||| |||||| ||||||||||| |||||||||| |||| ||| |
|
|
| T |
29853541 |
aattgtaccaaaagtcattctttcaagatatcaagatggatgaatactctggagacatttttttcaagatgcatgatcttgtccatgatctcgctcaatc |
29853442 |
T |
|
| Q |
329 |
agtagtggtgcaagaatgtatggttttagagaatgca |
365 |
Q |
| |
|
|||| ||| |||||||||| || ||| ||||||||| |
|
|
| T |
29853441 |
agtaatggggcaagaatgtgtgtatttggagaatgca |
29853405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 29 - 365
Target Start/End: Complemental strand, 30436246 - 30435910
Alignment:
| Q |
29 |
aaattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaa |
128 |
Q |
| |
|
|||||||| |||||| ||| |||| ||||| |||||| ||||| |||||||| |||| ||||||||| ||||||||||||||||||| || |||| | || |
|
|
| T |
30436246 |
aaattctattttgcccgctttgagattgagttacttttatttaacaccaaccctaaagcaatgtttctctttttgtgctatatttcccaaggatagagaa |
30436147 |
T |
|
| Q |
129 |
atcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatg |
228 |
Q |
| |
|
||| | || |||||| |||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||| ||||||| | |
|
|
| T |
30436146 |
atcctaaaagaagaattgattcgactttggatggctaatgaatttatttcatctatgggtaatttggacgttgaagatgttggaaaaatggtttggaagg |
30436047 |
T |
|
| Q |
229 |
aattgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatc |
328 |
Q |
| |
|
|||||| |||||| || ||||||||||| | | |||||||| ||| |||||||||||||||| ||||||||||| |||||||||| |||| ||| |
|
|
| T |
30436046 |
aattgtaccaaaaatcattctttcaagatagcaagatggatgaatattttggagacatttctttcaagatgcatgatcttgtccatgatctcgctcaatc |
30435947 |
T |
|
| Q |
329 |
agtagtggtgcaagaatgtatggttttagagaatgca |
365 |
Q |
| |
|
|||| || | ||||||||||| ||| ||||||||| |
|
|
| T |
30435946 |
agtaacggggaaagaatgtatgtatttggagaatgca |
30435910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 30 - 329
Target Start/End: Original strand, 30521302 - 30521601
Alignment:
| Q |
30 |
aattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaa |
129 |
Q |
| |
|
||||||| |||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||||| ||||||| | ||| |
|
|
| T |
30521302 |
aattctattttgcctgctttaaggttgagctactttcatttaaacccaaccttaaaacaatgtttcactttttgtgccatgtttcccaaagatatagaaa |
30521401 |
T |
|
| Q |
130 |
tcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatga |
229 |
Q |
| |
|
||||||||| ||| | |||||||| ||||| || || | |||||| ||||| || ||||||| ||||| ||||||||||| || |||||||||||||| |
|
|
| T |
30521402 |
tcatgaagggagatttaattcatctctggatcgccaacggatttatatcatcaagggaaaatttagaggtagaagatgttggaaatatgatttggaatga |
30521501 |
T |
|
| Q |
230 |
attgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatca |
329 |
Q |
| |
|
||||||||||||||| || || ||||| || | |||| ||||||||| ||| |||||||||||| |||||||||| ||||||||||||||| |||| |
|
|
| T |
30521502 |
attgtgccaaaagtcatttttccaagaaatcaagatggtcgatgattcaggaggcatttctttcaagttgcatgatcttgtccatgatcttgctcaatca |
30521601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 30 - 329
Target Start/End: Original strand, 30561642 - 30561941
Alignment:
| Q |
30 |
aattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaa |
129 |
Q |
| |
|
||||||| |||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||||| ||||||| | ||| |
|
|
| T |
30561642 |
aattctattttgcctgctttaaggttgagctactttcatttaaacccaaccttaaaacaatgtttcactttttgtgccatgtttcccaaagatatagaaa |
30561741 |
T |
|
| Q |
130 |
tcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatga |
229 |
Q |
| |
|
||||||||| ||| | |||||||| ||||| || || | |||||| ||||| || ||||||| ||||| ||||||||||| || |||||||||||||| |
|
|
| T |
30561742 |
tcatgaagggagatttaattcatctctggatcgccaacggatttatatcatcaagggaaaatttagaggtagaagatgttggaaatatgatttggaatga |
30561841 |
T |
|
| Q |
230 |
attgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatca |
329 |
Q |
| |
|
||||||||||||||| || || ||||| || | |||| ||||||||| ||| |||||||||||| |||||||||| ||||||||||||||| |||| |
|
|
| T |
30561842 |
attgtgccaaaagtcatttttccaagaaatcaagatggtcgatgattcaggaggcatttctttcaagttgcatgatcttgtccatgatcttgctcaatca |
30561941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 49 - 350
Target Start/End: Original strand, 30338221 - 30338519
Alignment:
| Q |
49 |
tgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatcatgaaggaagaactgat |
148 |
Q |
| |
|
|||| ||||| |||||| ||||| |||||||| |||| ||||||||| | ||||||||||||||||| ||||||| | ||||| ||||||||||| |||| |
|
|
| T |
30338221 |
tgagtttgagttacttttatttaacaccaaccctaaagcaatgtttctccttttgtgctatatttcccaaagatagagaaatcctgaaggaagaattgat |
30338320 |
T |
|
| Q |
149 |
tcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgccaaaagtctttc |
248 |
Q |
| |
|
||| |||||||||||||||| ||||||| || | | ||||| ||||||||||||||||| |||||| ||||||| ||||||| | |||| || ||| |
|
|
| T |
30338321 |
tcaactttggatggctaatggatttattgca---aagaggaatttagaggttgaagatgttggaaacatggtttggaaggaattgtacaaaaaatcgttc |
30338417 |
T |
|
| Q |
249 |
tttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagtagtggtgcaagaatgta |
348 |
Q |
| |
|
|||||||| | | |||||||| |||| |||||||||||||||| ||||||||||| |||||||||| |||| ||||||| ||| ||||||||||| |
|
|
| T |
30338418 |
tttcaagatagcaagatggatgaatattctggagacatttctttcaagatgcatgatcttgtccatgatctcgctcaatcagtaatggggcaagaatgta |
30338517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 38 - 350
Target Start/End: Original strand, 30242060 - 30242369
Alignment:
| Q |
38 |
tttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatcatgaag |
137 |
Q |
| |
|
|||||| ||| |||||||||| |||||| ||||| ||||||| |||||||||||||| ||||||||||||||||||| |||||| | ||||| ||||| |
|
|
| T |
30242060 |
tttgcctgctttgaggttgagttacttttatttaacaccaactctaaaacaatgtttctctttttgtgctatatttcccaaagatggagaaatcctgaag |
30242159 |
T |
|
| Q |
138 |
gaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgcc |
237 |
Q |
| |
|
|||||| ||||||| || || |||||||||| ||||||| || || ||| || ||||||||||||||||| |||||| ||||||| ||||||| || |
|
|
| T |
30242160 |
gaagaattgattcagctctgaatggctaatggatttattgcaaagaggaaa---ttagaggttgaagatgttggaaacatggtttggaaggaattgtacc |
30242256 |
T |
|
| Q |
238 |
aaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagtagtggt |
337 |
Q |
| |
|
|||| || || |||||||||| | |||||||| |||| |||||||||||||||| ||||||||||| |||||||||| |||| ||||||| ||| |
|
|
| T |
30242257 |
aaaaatcattttttcaagacagcaaaatggatgaatattctggagacatttctttcaagatgcatgatcttgtccatgatctcgctcaatcagtaatggg |
30242356 |
T |
|
| Q |
338 |
gcaagaatgtatg |
350 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
30242357 |
gccagaatgtatg |
30242369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 49 - 348
Target Start/End: Complemental strand, 30483811 - 30483515
Alignment:
| Q |
49 |
tgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatcatgaaggaagaactgat |
148 |
Q |
| |
|
|||||||||| |||||| ||||| |||||||| |||| ||||||||| | ||||||||||||||||| ||||||| | ||||| ||||||||||| |||| |
|
|
| T |
30483811 |
tgaggttgagttacttttatttaacaccaaccctaaagcaatgtttctccttttgtgctatatttcccaaagatagagaaatcctgaaggaagaattgat |
30483712 |
T |
|
| Q |
149 |
tcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgccaaaagtctttc |
248 |
Q |
| |
|
||| |||||||||||||||| ||||||| || | | ||||| ||||||||||||||||| |||||| ||||||| ||||||| | ||| || ||| |
|
|
| T |
30483711 |
tcagctttggatggctaatggatttattgca---aagaggaatttagaggttgaagatgttggaaacatggtttggaaggaattgtacagaaaatcgttc |
30483615 |
T |
|
| Q |
249 |
tttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagtagtggtgcaagaatgta |
348 |
Q |
| |
|
|||||||| | | |||||||| |||| |||||||||||||||| ||||||||||| |||||||||| |||| ||||||| ||| ||||||||||| |
|
|
| T |
30483614 |
tttcaagatagcaagatggatgaatattctggagacatttctttcaagatgcatgatcttgtccatgatctcgctcaatcagtaatggggcaagaatgta |
30483515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 29 - 365
Target Start/End: Original strand, 30713101 - 30713437
Alignment:
| Q |
29 |
aaattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaa |
128 |
Q |
| |
|
|||||||| |||||| ||| ||||| |||| |||||| |||||||||||||| |||| ||||||||| ||||||||||||||||||| || |||| | || |
|
|
| T |
30713101 |
aaattctattttgcctgctttgaggctgagttacttttatttatcaccaaccctaaagcaatgtttctctttttgtgctatatttcccaaggatagagaa |
30713200 |
T |
|
| Q |
129 |
atcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatg |
228 |
Q |
| |
|
||| | || |||||| |||||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||||| ||||||| | |
|
|
| T |
30713201 |
atcctaaaagaagaattgattcgactttggatggctaatggatttatttcatctatgggtaatttggacgttgaagatgttggaaacatggtttggaagg |
30713300 |
T |
|
| Q |
229 |
aattgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatc |
328 |
Q |
| |
|
|||||| |||||| || ||||| ||||| | |||||||| |||| || |||||||||| |||||||||||||| |||||||||| |||| ||| |
|
|
| T |
30713301 |
aattgtaccaaaaatcattcttccaagattgcaagatggatgaatattctggaaacatttcttttaaaatgcatgatcttgtccatgatctcgctcaatc |
30713400 |
T |
|
| Q |
329 |
agtagtggtgcaagaatgtatggttttagagaatgca |
365 |
Q |
| |
|
|||| || | |||||||| || ||| ||||||||| |
|
|
| T |
30713401 |
agtaacggggaaagaatgtgtgtatttggagaatgca |
30713437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 29 - 406
Target Start/End: Complemental strand, 30750073 - 30749696
Alignment:
| Q |
29 |
aaattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaa |
128 |
Q |
| |
|
|||||| | |||||| ||| |||||||||| |||||| ||||| | || || |||||||||||||| ||||||||||||||||||| |||||| || || |
|
|
| T |
30750073 |
aaattccattttgcctgctttgaggttgagttacttttatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatgcagaa |
30749974 |
T |
|
| Q |
129 |
atcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatg |
228 |
Q |
| |
|
||| | |||||| || ||||| |||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||||||| |||| ||||| ||| |
|
|
| T |
30749973 |
atcctaaaggaaaaattgatttggctttggatggctaatggattgatttcatctaggggtaatatggaggttgaagatgttggcatcatggtttgggatg |
30749874 |
T |
|
| Q |
229 |
aattgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatc |
328 |
Q |
| |
|
|||||| ||||| || ||||||||||| | | |||||||| ||| | |||||||| ||||| || |||||||| ||||||||||||||| ||| |
|
|
| T |
30749873 |
aattgtatcaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaagattcatgatcttgtccatgatcttgctcaatc |
30749774 |
T |
|
| Q |
329 |
agtagtggtgcaagaatgtatggttttagagaatgcatgtttgacaaatatgtcaaaaagcacccttcatattagttt |
406 |
Q |
| |
|
|||| ||| ||||||||||||| ||| ||||||||| ||||| | | |||| |||||||| | ||||||||||| |
|
|
| T |
30749773 |
agtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcgaaaagcacacaccatattagttt |
30749696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 29 - 391
Target Start/End: Complemental strand, 30060799 - 30060437
Alignment:
| Q |
29 |
aaattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaa |
128 |
Q |
| |
|
|||||| | |||||| ||| |||||||||| |||||| ||||| | || || |||||||||||||| ||||||||||||||||||| |||||| || || |
|
|
| T |
30060799 |
aaattccattttgcctgctttgaggttgagttacttttatttaccggcagccctaaaacaatgtttctctttttgtgctatatttcccaaagatgcagaa |
30060700 |
T |
|
| Q |
129 |
atcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatg |
228 |
Q |
| |
|
||| | ||||||||| ||||| |||||||||||||||| ||| ||||||||||| | | |||||||||||||||||||| |||| | ||| ||| |
|
|
| T |
30060699 |
atcctaaaggaagaattgatttggctttggatggctaatggattgatttcatctaggggtactacggaggttgaagatgttggcatcatggtgtgggatg |
30060600 |
T |
|
| Q |
229 |
aattgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatc |
328 |
Q |
| |
|
|||||| |||||| || ||||||||||| | | |||||||| ||| | |||||||| ||||| |||||||| || ||||||||||||||| ||| |
|
|
| T |
30060599 |
aattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaagatgcatgaccttgtccatgatcttgctcaatc |
30060500 |
T |
|
| Q |
329 |
agtagtggtgcaagaatgtatggttttagagaatgcatgtttgacaaatatgtcaaaaagcac |
391 |
Q |
| |
|
|||| ||| ||||||||||||| ||| ||||||||| ||||| | | ||||||||||||| |
|
|
| T |
30060499 |
agtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcac |
30060437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 49 - 349
Target Start/End: Complemental strand, 30400484 - 30400184
Alignment:
| Q |
49 |
tgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatcatgaaggaagaactgat |
148 |
Q |
| |
|
|||||||||| |||||| ||||| |||| ||| |||| ||||||||| ||||||||||||||||||| || |||| ||||| |||| |||||| |||| |
|
|
| T |
30400484 |
tgaggttgagttacttttatttaacaccgaccctaaagcaatgtttctctttttgtgctatatttcccaaggatagggaaatcttgaaagaagaattgat |
30400385 |
T |
|
| Q |
149 |
tcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgccaaaagtctttc |
248 |
Q |
| |
|
||| |||||||||||||||| ||| ||||||||| | ||| |||||||||||||||||||| |||| ||||| ||||||||| |||||| || ||| |
|
|
| T |
30400384 |
tcagctttggatggctaatggattgatttcatcttggggtaatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattc |
30400285 |
T |
|
| Q |
249 |
tttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagtagtggtgcaagaatgta |
348 |
Q |
| |
|
|||||||||| | |||||||| ||| | ||||||| ||||| ||||||||||| |||||||||| ||| |||||| ||| ||||||||||| |
|
|
| T |
30400284 |
tttcaagacaaaaaaatggatgaattttctggcaacatttcattcaagatgcatgatcttgtccatgatctcgctaagtcagtaatggggcaagaatgta |
30400185 |
T |
|
| Q |
349 |
t |
349 |
Q |
| |
|
| |
|
|
| T |
30400184 |
t |
30400184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 38 - 331
Target Start/End: Complemental strand, 30475796 - 30475503
Alignment:
| Q |
38 |
tttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatcatgaag |
137 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||| |||| |||||||| | ||||| ||||||||||| |||||||| ||||||| |||| | ||| |
|
|
| T |
30475796 |
tttgccagccttgaggttaagctactttcatttaacaccgaccttaaagcggtgttttgctttttgtgcgatatttcccaaagatatggaaattgtaaag |
30475697 |
T |
|
| Q |
138 |
gaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgcc |
237 |
Q |
| |
|
||||| |||||||||| ||||||| |||| |||||||| || | |||||||| || ||| | ||||||| ||||||||||| ||| |||||| |
|
|
| T |
30475696 |
gaagatttgattcatctatggatgggcaatggatttattttctcaaaggctaatttggatgtagaattttttggcaatatgatttggaaggaactgtgcc |
30475597 |
T |
|
| Q |
238 |
aaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagt |
331 |
Q |
| |
|
|||| || ||||| |||||||| | || |||||| ||||| |||||||| ||||||| |||||||| || | ||||||||||||| |||||| |
|
|
| T |
30475596 |
aaaaatcattcttccaagacatcaagatagatgattattcaggagacattactttcaagatgcatgacctagtgcatgatcttgctcaatcagt |
30475503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 163 - 350
Target Start/End: Original strand, 30676978 - 30677165
Alignment:
| Q |
163 |
ctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgccaaaagtctttctttcaagacattca |
262 |
Q |
| |
|
|||||| |||||||||||||| |||||||| ||||| |||||||| |||| | ||||||| ||||||| |||||| || ||||||||||| | | |
|
|
| T |
30676978 |
ctaatggatttatttcatctatgggtaatttggacgttgatgatgttggaaacacggtttggaaggaattgtaccaaaaatcattctttcaagatagaaa |
30677077 |
T |
|
| Q |
263 |
tatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagtagtggtgcaagaatgtatg |
350 |
Q |
| |
|
|||||||| |||| ||||||||||||| || ||||||||||| |||||||||| |||| || |||| ||| || |||||||||| |
|
|
| T |
30677078 |
gatggatgaatattctggagacatttcttttaagatgcatgatcttgtccatgatctcgctcaattagtaatggggccagaatgtatg |
30677165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 30330851 - 30330908
Alignment:
| Q |
49 |
tgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgc |
106 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||| || ||||| ||||||||||| |
|
|
| T |
30330851 |
tgaggttgagctactttcatttaactccaaccttaaagcagtgttttgctttttgtgc |
30330908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 350
Target Start/End: Original strand, 30330911 - 30331128
Alignment:
| Q |
133 |
tgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaatt |
232 |
Q |
| |
|
|||||||| || || || |||| | ||||||| ||| ||||||||||||||| ||||||||||| |||||||| | |||| |||||||| ||| |
|
|
| T |
30330911 |
tgaaggaataattgttttatctctagatggctgatggatttatttcatctaggcgtaatttggaggtcctagatgttgctagcatggcttggaatggatt |
30331010 |
T |
|
| Q |
233 |
gtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagta |
332 |
Q |
| |
|
||||||||| | |||||| ||||||| | || |||| |||| | |||||||||||| || | || |||||| || |||||||||||| |||| || |
|
|
| T |
30331011 |
gtgccaaaaaccattctttgaagacatcaagatctatgaatattctaaagacatttctttaaagacgcgtgatcttttcaatgatcttgctcaatcaata |
30331110 |
T |
|
| Q |
333 |
gtggtgcaagaatgtatg |
350 |
Q |
| |
|
||| |||| ||| |||| |
|
|
| T |
30331111 |
ctggagcaacaatatatg |
30331128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 165; Significance: 4e-88; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 64 - 407
Target Start/End: Complemental strand, 13616992 - 13616649
Alignment:
| Q |
64 |
ttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatcatgaaggaagaactgattcatctttggatggc |
163 |
Q |
| |
|
|||||||||| |||||||| |||||||| |||||||| |||| | |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
13616992 |
ttcatttatcgccaacctttaaacaatgattcgctttctgtgttgtatttcctaaagatacaaaaatcacaaaggaagaattgattcatctttggatggc |
13616893 |
T |
|
| Q |
164 |
taatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgccaaaagtctttctttcaagacattcat |
263 |
Q |
| |
|
||||||||||||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| ||||||||||| ||| |
|
|
| T |
13616892 |
taatgaatttatttcatgtaaaaaaaaattggaggttgaagatgttggaaacatgatttggaatgaattgtaccaaaaatctttttttcaagacatccat |
13616793 |
T |
|
| Q |
264 |
atggatgatgattcaagagacatttctttcaaaatgcatgatctcat-ccatgatcttgctcgatcagtagtggtgcaagaatgtatggttttagagaat |
362 |
Q |
| |
|
||| ||||| ||||||||| ||||| |||||| |||| ||||| | ||||||||| |||| || ||| | || ||||||||||||||||||||||||| |
|
|
| T |
13616792 |
atgaatgattattcaagagtgatttcattcaaagtgcacaatctcgtcccatgatctcgctcaatgagt-ggggggcaagaatgtatggttttagagaat |
13616694 |
T |
|
| Q |
363 |
gcatgtttgacaaatatgtcaaaaagcacccttcatattagtttc |
407 |
Q |
| |
|
|||| || | || | ||||||||||| | ||||||||||||| |
|
|
| T |
13616693 |
gcatccgtgcctaacttatcaaaaagcacacatcatattagtttc |
13616649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 30 - 350
Target Start/End: Complemental strand, 52352388 - 52352067
Alignment:
| Q |
30 |
aattctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaa |
129 |
Q |
| |
|
||||||| |||||| || |||||||||| || || |||||| | |||||||||||||||||||| |||| ||||| |||||||| |||||||| ||| |
|
|
| T |
52352388 |
aattctattttgcctgccttgaggttgagttatttccatttaacgtcaaccttaaaacaatgtttctctttctgtgccatatttcccaaagatacggaaa |
52352289 |
T |
|
| Q |
130 |
tcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaa-gatgttggcaacatgatttggaatg |
228 |
Q |
| |
|
|| | || || || |||||||||| |||||||| |||| ||||||||| |||| ||||||||||||| ||| || |||||||| ||||||||||||| |
|
|
| T |
52352288 |
tcctaaaagacgatttgattcatctctggatggccaatggatttatttcgtctaaggaaaatttggaggtagaaagaagttggcaatatgatttggaatg |
52352189 |
T |
|
| Q |
229 |
aattgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatc |
328 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| | || ||||| ||| | |||||||||||||||| ||||||||||| | ||||||||||||| ||| |
|
|
| T |
52352188 |
aattgtaccaaaagtcattctttcaagacatcaagatcaatgattatttaggagacatttctttcaagatgcatgatcttgtacatgatcttgctcaatc |
52352089 |
T |
|
| Q |
329 |
agtagtggtgcaagaatgtatg |
350 |
Q |
| |
|
| | |||| || ||| |||||| |
|
|
| T |
52352088 |
aattgtggggccagagtgtatg |
52352067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 33 - 307
Target Start/End: Original strand, 20296262 - 20296536
Alignment:
| Q |
33 |
tctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatca |
132 |
Q |
| |
|
|||| |||||| ||| ||||| |||| |||||| ||||| ||||||| |||| ||||||||| |||||||||||||||||||||| |||| | ||||| |
|
|
| T |
20296262 |
tctattttgcctgctttgaggctgagttacttttatttaacaccaactctaaagcaatgtttctctttttgtgctatatttcctaaggatagagaaatct |
20296361 |
T |
|
| Q |
133 |
tgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaatt |
232 |
Q |
| |
|
|||| |||||| ||||||| |||||||||||||||| ||| |||||||||| |||||||| |||||||||||||| |||||| ||||||| ||||| |
|
|
| T |
20296362 |
tgaaagaagaattgattcagctttggatggctaatggattaatttcatctatgggtaatttggacgttgaagatgttggaaacatggtttggaaggaatt |
20296461 |
T |
|
| Q |
233 |
gtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatct |
307 |
Q |
| |
|
|| |||||| || ||||||||||| || | || ||||| |||| ||||| |||| |||||| ||||||||||| |
|
|
| T |
20296462 |
gtaccaaaaatcattctttcaagaaatcaaaatagatgaatattctagagatatttatttcaagatgcatgatct |
20296536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 33 - 365
Target Start/End: Complemental strand, 26707758 - 26707429
Alignment:
| Q |
33 |
tctactttgccagctctgaggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatca |
132 |
Q |
| |
|
|||| |||||| ||| |||||||||| |||||| ||||| |||||||| |||| ||||||||| ||||||||||||||||||| ||||||| | ||||| |
|
|
| T |
26707758 |
tctattttgcctgctttgaggttgagttacttttatttaacaccaaccctaaagcaatgtttctctttttgtgctatatttcccaaagatagagaaatct |
26707659 |
T |
|
| Q |
133 |
tgaaggaagaactgattcatctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaatt |
232 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||| ||||||| || | | ||||| ||||||||||||||||| |||||| ||||||| ||||| |
|
|
| T |
26707658 |
tgaaggaagaattgattcaactttggatggctaatggatttattgca---aagaggaatttagaggttgaagatgttggaaacatggtttggaaggaatt |
26707562 |
T |
|
| Q |
233 |
gtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttcaaaatgcatgatctcatccatgatcttgctcgatcagta |
332 |
Q |
| |
|
|| |||||| || |||||||||||| | | |||| ||| |||| |||||||||||||||| ||||||||||| ||||||||||| |||| ||||||| |
|
|
| T |
26707561 |
gtaccaaaaatcattctttcaagactgtaagatgggtgaatattctggagacatttctttcaagatgcatgatcttatccatgatctcgctcaatcagta |
26707462 |
T |
|
| Q |
333 |
gtggtgcaagaatgtatggttttagagaatgca |
365 |
Q |
| |
|
||| |||||||| ||| ||| ||||||||| |
|
|
| T |
26707461 |
atgggacaagaatgcatgtatttggagaatgca |
26707429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 52 - 256
Target Start/End: Original strand, 25293623 - 25293827
Alignment:
| Q |
52 |
ggttgagctactttcatttatcaccaaccttaaaacaatgtttcgctttttgtgctatatttcctaaagatacaaaaatcatgaaggaagaactgattca |
151 |
Q |
| |
|
|||||||||||||| ||||| | || |||||||| | |||||| |||||||||||||| ||||| ||||||||||||||| ||||||||| ||| ||| |
|
|
| T |
25293623 |
ggttgagctacttttatttaactccgaccttaaagcgatgttttgctttttgtgctatgtttccaaaagatacaaaaatcgataaggaagaattgactca |
25293722 |
T |
|
| Q |
152 |
tctttggatggctaatgaatttatttcatctagaaaaaatttggaggttgaagatgttggcaacatgatttggaatgaattgtgccaaaagtctttcttt |
251 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||| || |||||| |
|
|
| T |
25293723 |
tctttggatggctaatggatttatttcatctagggaaaatttggaggttgaagatgttggcagcatggtttggaatgaattgtgccaaaaatcattcttt |
25293822 |
T |
|
| Q |
252 |
caaga |
256 |
Q |
| |
|
||||| |
|
|
| T |
25293823 |
caaga |
25293827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 8904 - 8816
Alignment:
| Q |
97 |
ctttttgtgctatatttcctaaagatacaaaaatcatgaaggaagaactgattcatctttggatggctaatgaatttatttcatctaga |
185 |
Q |
| |
|
||||||||||| | |||||||||||| ||||| |||||||| | || ||||| |||||||||||||||| | || || |||||||| |
|
|
| T |
8904 |
ctttttgtgctgtttttcctaaagattttaaaatggtgaaggaaaatctcattcaactttggatggctaatggacttgttacatctaga |
8816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 16987171 - 16987119
Alignment:
| Q |
133 |
tgaaggaagaactgattcatctttggatggctaatgaatttatttcatctaga |
185 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||| | || || |||||||| |
|
|
| T |
16987171 |
tgaaggaagatctcattcatctttggatggctaatggacttgttacatctaga |
16987119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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