View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0095_low_32 (Length: 374)
Name: NF0095_low_32
Description: NF0095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0095_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 1 - 317
Target Start/End: Complemental strand, 6626111 - 6625795
Alignment:
| Q |
1 |
tgtttatgttgccactaataggtatgtgtaccaaagttaggcaaccagtttgagctattcacttttctctttctcatctggcatccctgaaacatatttt |
100 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
6626111 |
tgtttatgttgccactaataggtatgtgtaccaaagttaggcaaccagtttgagctattcacttttctctttctcatctggcatctctgaaacatatttt |
6626012 |
T |
|
| Q |
101 |
cattccttgcagagaaactggagcattgtgtgcaatgaaggaagcagacatattttttgatgatccaaaatctgccgagagtataaagcagttagaacag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6626011 |
cattccttgcagagaaactggagcattgtgtgcaatgaaggaagcagacatattttttgatgatccaaaatctgccgagagtataaagcagttagaacag |
6625912 |
T |
|
| Q |
201 |
gttttcatccatcacttggttgttaatgctgtttatttattatctgtatggtgtatgaagtatgtacatttaaattcactatctgttttatttgttctgt |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6625911 |
gttttcatccatcacttggttgttaatgctgtttatttattatatgtatggtgtatgaagtatgtacatttaaattcactatctgttttatttgttctgt |
6625812 |
T |
|
| Q |
301 |
ctgttggtgtggacact |
317 |
Q |
| |
|
||||||||||||||||| |
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| T |
6625811 |
ctgttggtgtggacact |
6625795 |
T |
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