View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0098_low_4 (Length: 395)

Name: NF0098_low_4
Description: NF0098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0098_low_4
NF0098_low_4
[»] chr5 (32 HSPs)
chr5 (41-383)||(24313422-24313771)
chr5 (41-383)||(24355759-24356108)
chr5 (225-351)||(43574568-43574699)
chr5 (180-308)||(208925-209051)
chr5 (179-344)||(38879559-38879721)
chr5 (181-308)||(24448901-24449026)
chr5 (179-282)||(29334432-29334534)
chr5 (180-308)||(4619102-4619230)
chr5 (182-308)||(13801767-13801893)
chr5 (181-308)||(19142942-19143066)
chr5 (225-308)||(39301134-39301217)
chr5 (182-264)||(12575660-12575741)
chr5 (225-282)||(20135641-20135699)
chr5 (225-308)||(8170026-8170106)
chr5 (225-268)||(12477162-12477205)
chr5 (226-308)||(27328763-27328846)
chr5 (186-256)||(39079755-39079824)
chr5 (227-308)||(28516477-28516558)
chr5 (180-277)||(32703464-32703559)
chr5 (225-270)||(35710360-35710404)
chr5 (179-308)||(41014330-41014456)
chr5 (225-277)||(43334245-43334298)
chr5 (182-282)||(16880647-16880745)
chr5 (180-256)||(16957377-16957451)
chr5 (186-246)||(30006397-30006456)
chr5 (226-277)||(7097803-7097853)
chr5 (225-256)||(10306516-10306547)
chr5 (226-269)||(11657742-11657785)
chr5 (179-277)||(3771381-3771477)
chr5 (225-270)||(34154856-34154900)
chr5 (225-277)||(7368438-7368489)
chr5 (244-308)||(42924894-42924958)
[»] chr1 (48 HSPs)
chr1 (180-308)||(10668259-10668387)
chr1 (181-344)||(46247952-46248110)
chr1 (181-277)||(50812005-50812099)
chr1 (228-308)||(27136696-27136776)
chr1 (225-308)||(31442431-31442515)
chr1 (179-344)||(14617039-14617199)
chr1 (178-308)||(35005157-35005287)
chr1 (225-308)||(30395768-30395852)
chr1 (182-277)||(4349703-4349796)
chr1 (179-343)||(9939463-9939625)
chr1 (225-344)||(19932795-19932909)
chr1 (225-349)||(27201643-27201765)
chr1 (227-344)||(32632601-32632713)
chr1 (228-344)||(17470390-17470503)
chr1 (227-308)||(20004134-20004216)
chr1 (181-277)||(18741956-18742052)
chr1 (181-308)||(18944677-18944805)
chr1 (179-267)||(19974071-19974158)
chr1 (227-315)||(25468307-25468394)
chr1 (229-309)||(45264445-45264525)
chr1 (225-308)||(46991838-46991920)
chr1 (180-306)||(19656103-19656228)
chr1 (228-344)||(22930114-22930224)
chr1 (227-277)||(47214574-47214623)
chr1 (181-270)||(19701642-19701730)
chr1 (227-308)||(23768364-23768444)
chr1 (232-277)||(33223048-33223093)
chr1 (225-277)||(42304249-42304302)
chr1 (230-344)||(2435833-2435944)
chr1 (226-270)||(21910692-21910735)
chr1 (225-277)||(35253229-35253280)
chr1 (180-344)||(34725096-34725253)
chr1 (180-351)||(6983809-6983973)
chr1 (229-279)||(10378781-10378830)
chr1 (180-282)||(20999848-20999948)
chr1 (245-307)||(24564379-24564441)
chr1 (225-344)||(35117808-35117925)
chr1 (225-303)||(44485151-44485228)
chr1 (184-282)||(15511150-15511249)
chr1 (225-344)||(18724587-18724702)
chr1 (225-270)||(20036293-20036337)
chr1 (181-246)||(30555210-30555274)
chr1 (227-308)||(39215002-39215083)
chr1 (228-308)||(11596547-11596625)
chr1 (225-277)||(12126879-12126930)
chr1 (182-242)||(37299573-37299632)
chr1 (180-216)||(39802726-39802762)
chr1 (226-282)||(41319849-41319904)
[»] chr3 (40 HSPs)
chr3 (181-315)||(40272811-40272943)
chr3 (181-315)||(53996564-53996697)
chr3 (225-344)||(34420685-34420801)
chr3 (225-308)||(54374387-54374470)
chr3 (180-343)||(13628788-13628948)
chr3 (181-343)||(5173718-5173876)
chr3 (181-277)||(54484755-54484849)
chr3 (225-344)||(8247729-8247846)
chr3 (183-308)||(22609799-22609921)
chr3 (180-277)||(25517168-25517263)
chr3 (182-282)||(45786214-45786314)
chr3 (181-308)||(46421033-46421161)
chr3 (182-277)||(39203578-39203671)
chr3 (184-344)||(26573127-26573282)
chr3 (180-308)||(29366718-29366846)
chr3 (181-269)||(829441-829528)
chr3 (225-308)||(13730644-13730728)
chr3 (225-308)||(14986990-14987074)
chr3 (181-277)||(26869770-26869864)
chr3 (181-277)||(34771363-34771457)
chr3 (227-344)||(25944469-25944583)
chr3 (225-299)||(49013515-49013590)
chr3 (225-282)||(353391-353449)
chr3 (183-277)||(22122918-22123010)
chr3 (227-308)||(45139520-45139602)
chr3 (228-308)||(10795468-10795549)
chr3 (227-315)||(6411866-6411952)
chr3 (180-308)||(12914033-12914159)
chr3 (225-277)||(15797284-15797335)
chr3 (225-277)||(16735504-16735555)
chr3 (225-277)||(47624105-47624156)
chr3 (225-308)||(30928189-30928271)
chr3 (228-315)||(33926109-33926195)
chr3 (228-259)||(38425266-38425297)
chr3 (181-308)||(516442-516570)
chr3 (181-274)||(44403554-44403646)
chr3 (225-277)||(1217152-1217203)
chr3 (227-344)||(9607203-9607318)
chr3 (225-277)||(31592911-31592962)
chr3 (181-269)||(52926218-52926304)
[»] chr4 (41 HSPs)
chr4 (181-277)||(54175105-54175201)
chr4 (181-282)||(20639657-20639757)
chr4 (236-344)||(487187-487292)
chr4 (225-344)||(20224962-20225075)
chr4 (181-282)||(23501824-23501925)
chr4 (225-344)||(30581507-30581624)
chr4 (181-315)||(35567174-35567306)
chr4 (181-277)||(20908635-20908730)
chr4 (179-282)||(51865035-51865136)
chr4 (181-344)||(48598824-48598980)
chr4 (225-282)||(35894503-35894560)
chr4 (225-308)||(5306706-5306787)
chr4 (225-308)||(5648270-5648351)
chr4 (183-344)||(6430627-6430782)
chr4 (226-277)||(7909324-7909374)
chr4 (230-351)||(19027819-19027936)
chr4 (225-308)||(25463133-25463215)
chr4 (225-308)||(40915840-40915921)
chr4 (225-308)||(47443968-47444050)
chr4 (230-308)||(37494862-37494939)
chr4 (227-308)||(17043438-17043518)
chr4 (225-277)||(9832355-9832406)
chr4 (225-308)||(16408643-16408727)
chr4 (225-308)||(16911573-16911657)
chr4 (225-277)||(29207940-29207991)
chr4 (225-277)||(47528572-47528623)
chr4 (182-277)||(30690176-30690269)
chr4 (225-308)||(39029102-39029185)
chr4 (226-277)||(49796839-49796889)
chr4 (225-307)||(14983846-14983927)
chr4 (225-270)||(20225123-20225169)
chr4 (227-308)||(21646975-21647057)
chr4 (226-282)||(13256442-13256499)
chr4 (225-277)||(20405129-20405182)
chr4 (226-307)||(21489099-21489180)
chr4 (181-262)||(36816383-36816463)
chr4 (182-247)||(44363130-44363194)
chr4 (227-256)||(49938637-49938666)
chr4 (225-277)||(30639421-30639472)
chr4 (181-256)||(33836486-33836561)
chr4 (247-307)||(51420586-51420646)
[»] chr2 (24 HSPs)
chr2 (181-344)||(24200622-24200782)
chr2 (182-347)||(10543673-10543835)
chr2 (182-308)||(25079717-25079842)
chr2 (180-308)||(8455314-8455440)
chr2 (180-277)||(9671221-9671316)
chr2 (182-344)||(14530296-14530455)
chr2 (181-277)||(10546205-10546299)
chr2 (181-278)||(36871533-36871627)
chr2 (180-277)||(21779259-21779354)
chr2 (227-308)||(32781332-32781412)
chr2 (225-349)||(5841001-5841123)
chr2 (225-344)||(12023961-12024075)
chr2 (225-277)||(22371096-22371147)
chr2 (241-344)||(29419942-29420046)
chr2 (225-277)||(44449425-44449477)
chr2 (181-308)||(14444740-14444864)
chr2 (180-247)||(23488554-23488620)
chr2 (181-276)||(25249737-25249830)
chr2 (226-308)||(17623575-17623656)
chr2 (226-308)||(25641513-25641593)
chr2 (228-308)||(17380282-17380360)
chr2 (225-277)||(24890453-24890504)
chr2 (186-270)||(31821347-31821429)
chr2 (178-246)||(44643595-44643662)
[»] chr8 (30 HSPs)
chr8 (180-308)||(44530160-44530286)
chr8 (225-315)||(7136569-7136660)
chr8 (181-282)||(35261716-35261815)
chr8 (180-308)||(39460992-39461120)
chr8 (180-308)||(36720807-36720933)
chr8 (181-308)||(28817625-28817750)
chr8 (184-298)||(29877115-29877227)
chr8 (229-315)||(44742564-44742650)
chr8 (181-308)||(5135289-5135413)
chr8 (225-344)||(12670292-12670405)
chr8 (225-344)||(30454139-30454252)
chr8 (183-277)||(45071306-45071398)
chr8 (229-308)||(6760833-6760913)
chr8 (227-315)||(8483982-8484069)
chr8 (225-277)||(13160743-13160794)
chr8 (226-309)||(25250532-25250616)
chr8 (226-344)||(42083741-42083856)
chr8 (227-344)||(44781548-44781663)
chr8 (225-304)||(8897806-8897884)
chr8 (180-306)||(12625902-12626027)
chr8 (228-282)||(20869960-20870015)
chr8 (227-277)||(26954175-26954226)
chr8 (227-277)||(43942366-43942417)
chr8 (225-270)||(20284111-20284157)
chr8 (225-270)||(21070739-21070785)
chr8 (225-344)||(22598135-22598250)
chr8 (228-343)||(35105902-35106014)
chr8 (226-314)||(5689636-5689723)
chr8 (225-277)||(19729382-19729433)
chr8 (225-277)||(23000261-23000312)
[»] scaffold0057 (4 HSPs)
scaffold0057 (181-308)||(46842-46967)
scaffold0057 (230-277)||(43699-43745)
scaffold0057 (185-270)||(46710-46794)
scaffold0057 (226-282)||(24815-24870)
[»] chr7 (33 HSPs)
chr7 (181-308)||(7879649-7879774)
chr7 (225-308)||(46354205-46354289)
chr7 (180-277)||(35787267-35787362)
chr7 (176-308)||(2541013-2541143)
chr7 (224-308)||(27629645-27629728)
chr7 (183-269)||(29907469-29907552)
chr7 (225-308)||(47716470-47716554)
chr7 (225-308)||(42798680-42798762)
chr7 (225-283)||(17048857-17048915)
chr7 (194-308)||(33871922-33872033)
chr7 (225-344)||(43557450-43557567)
chr7 (183-308)||(11617589-11617712)
chr7 (225-344)||(19265793-19265907)
chr7 (228-308)||(7644967-7645047)
chr7 (225-308)||(42805535-42805619)
chr7 (225-344)||(48735164-48735278)
chr7 (179-277)||(21172006-21172102)
chr7 (228-277)||(42476913-42476961)
chr7 (226-344)||(14099049-14099163)
chr7 (226-344)||(14409066-14409180)
chr7 (183-306)||(18747499-18747621)
chr7 (225-277)||(34626250-34626301)
chr7 (225-277)||(42391142-42391193)
chr7 (227-270)||(8148989-8149031)
chr7 (226-277)||(28078175-28078225)
chr7 (225-307)||(1408469-1408550)
chr7 (225-344)||(10693115-10693228)
chr7 (226-308)||(21566446-21566528)
chr7 (225-282)||(16341315-16341372)
chr7 (288-351)||(22065559-22065619)
chr7 (182-282)||(22698967-22699068)
chr7 (228-308)||(23419719-23419798)
chr7 (225-277)||(32758301-32758352)
[»] chr6 (10 HSPs)
chr6 (181-344)||(12221913-12222074)
chr6 (181-308)||(29355854-29355981)
chr6 (225-308)||(2166452-2166536)
chr6 (225-308)||(2178085-2178169)
chr6 (177-277)||(1354752-1354850)
chr6 (225-308)||(7947413-7947496)
chr6 (225-344)||(1346942-1347055)
chr6 (181-245)||(6808468-6808531)
chr6 (226-256)||(11849116-11849146)
chr6 (225-277)||(24734684-24734737)
[»] scaffold0254 (1 HSPs)
scaffold0254 (225-308)||(4168-4253)
[»] scaffold0015 (1 HSPs)
scaffold0015 (180-277)||(48632-48727)
[»] scaffold0258 (1 HSPs)
scaffold0258 (181-277)||(13023-13117)
[»] scaffold0311 (1 HSPs)
scaffold0311 (225-295)||(10834-10903)
[»] scaffold0049 (1 HSPs)
scaffold0049 (227-308)||(58988-59070)
[»] scaffold0180 (1 HSPs)
scaffold0180 (225-270)||(24175-24219)
[»] scaffold0168 (1 HSPs)
scaffold0168 (225-277)||(30619-30670)


Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 41 - 383
Target Start/End: Original strand, 24313422 - 24313771
Alignment:
Q  41 cacaagcatatgaaaaaa--gcctcgacagaaagcttatgttatgctgaaaaattcaactttaa-----cagcaaataat---agttaaattccaagctt 130  Q
    ||||||||||||||||||  |||| | |||||| ||| |||||||||||||| |||||||||||     |||||||||||   ||||||||||||||| |    
T  24313422 cacaagcatatgaaaaaaaagccttggcagaaaacttctgttatgctgaaaatttcaactttaatttaacagcaaataatcttagttaaattccaagcct 24313521  T
Q  131 gcagcaaatgatttctttcggcaacagctagggctttgtctgttttaattaaaagggcagcccggtgcattaaagctctagcatacacatggccccggga 230  Q
    ||||||||| ||||||||||| ||||  |||| ||| |||||||||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||    
T  24313522 gcagcaaattatttctttcggtaacaaatagg-cttagtctgttttaattaaaagggcagcccggtgcactaaagctacagcatacacatggcgccggga 24313620  T
Q  231 aggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaa-agggttgtttccaagacttgaacacatgactgaatttcagtcat 329  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    ||||||||||    
T  24313621 aggggtcccaccattttggtgtattgaacgcaaccttatcttgttttctacagaagggggttgtttccaagacttgaacacatgac---ctttcagtcat 24313717  T
Q  330 gtgacaacaactttatcattgcaaggttaaaactaaggctgtctctcccattca 383  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24313718 gtgacaacaactttatcgttgcaaggttaaaactaaggctgtctctcccattca 24313771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 41 - 383
Target Start/End: Original strand, 24355759 - 24356108
Alignment:
Q  41 cacaagcatatgaaaaaa--gcctcgacagaaagcttatgttatgctgaaaaattcaactttaa-----cagcaaataat---agttaaattccaagctt 130  Q
    ||||||||||||||||||  |||| | |||||| ||| |||||||||||||| |||||||||||     |||||||||||   ||||||||||||||| |    
T  24355759 cacaagcatatgaaaaaaaagccttggcagaaaacttctgttatgctgaaaatttcaactttaatttaacagcaaataatcttagttaaattccaagcct 24355858  T
Q  131 gcagcaaatgatttctttcggcaacagctagggctttgtctgttttaattaaaagggcagcccggtgcattaaagctctagcatacacatggccccggga 230  Q
    ||||||||| ||||||||||| ||||  |||| ||| |||||||||||||||||||||||||||||||| |||||||  |||||||||||||| ||||||    
T  24355859 gcagcaaattatttctttcggtaacaaatagg-cttagtctgttttaattaaaagggcagcccggtgcactaaagctacagcatacacatggcgccggga 24355957  T
Q  231 aggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaa-agggttgtttccaagacttgaacacatgactgaatttcagtcat 329  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    ||||||||||    
T  24355958 aggggtcccaccattttggtgtattgaacgcaaccttatcttgttttctacagaagggggttgtttccaagacttgaacacatgac---ctttcagtcat 24356054  T
Q  330 gtgacaacaactttatcattgcaaggttaaaactaaggctgtctctcccattca 383  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24356055 gtgacaacaactttatcgttgcaaggttaaaactaaggctgtctctcccattca 24356108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 225 - 351
Target Start/End: Complemental strand, 43574699 - 43574568
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaa----- 319  Q
    |||||||||||||||||||||| ||| ||||| ||||| ||||||| ||||||||||| ||  | ||||||||| ||||||||||| |||| |||         
T  43574699 ccgggaaggggtcccaccattt-ggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgaccgaagtgac 43574601  T
Q  320 -tttcagtcatgtgacaacaactttatcattgc 351  Q
     ||||||||| ||||||||||||||||||||||    
T  43574600 ctttcagtcacgtgacaacaactttatcattgc 43574568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 208925 - 209051
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    |||||| || |||||||||| ||||||||| |||||| || || || || ||||||||||||||||||||||||||||| ||| ||||||| |||||| |    
T  208925 taaaagtgccgcccggtgcactaaagctcttgcatacccagggtccagg-aaggggtcccaccattttggtgtattgaatgcagccttaccctgtttt-t 209022  T
Q  280 acagaaagggttgtttccaagacttgaac 308  Q
    ||| ||  ||||||| ||| |||||||||    
T  209023 acacaagaggttgttgccaggacttgaac 209051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 38879721 - 38879559
Alignment:
Q  179 ttaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||    
T  38879721 ttaaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 38879623  T
Q  278 ctacagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
     || | ||  || |||||||| ||||||||| | ||||    |||||||||  ||||||||||||||    
T  38879622 ttatacaagaggctgtttccaggacttgaacccgtgac---ctttcagtcacatgacaacaacttta 38879559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 24449026 - 24448901
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| ||||||||| ||||||||  |||||| || || || |||||||||||||||||||| ||||||||| ||||| ||||||| | |||| ||    
T  24449026 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctatttttta 24448929  T
Q  281 cagaaagggttgtttccaagacttgaac 308  Q
    || ||| || |||||||| |||||||||    
T  24448928 cacaaaaggctgtttccaggacttgaac 24448901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 282
Target Start/End: Complemental strand, 29334534 - 29334432
Alignment:
Q  179 ttaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttc 278  Q
    ||||||||||||||||||||||||||| ||   ||||| || ||  ||||||| ||||||||||||| |||||||||| ||||| ||||||||||||||     
T  29334534 ttaaaagggcagcccggtgcattaaagatcccacatacgca-gggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttt 29334436  T
Q  279 taca 282  Q
    ||||    
T  29334435 taca 29334432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 4619102 - 4619230
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttc 278  Q
    |||||||||| ||||||||| ||||||||| |||||  |  || || ||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||     
T  4619102 taaaagggcaacccggtgcactaaagctctcgcatatgcggggtcc-gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 4619200  T
Q  279 tacagaaagggttgtttccaagacttgaac 308  Q
    |||| ||  || | |||||| |||||||||    
T  4619201 tacacaagaggctatttccaggacttgaac 4619230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 13801767 - 13801893
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    |||||||| ||||||||| ||||||||| |||||  |  || || ||||||||||||||||||| ||||||||||| ||||| ||||||| |||||| ||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtcc-gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 13801865  T
Q  281 cagaaagggttgtttccaagacttgaac 308  Q
    || ||  || || ||||| |||||||||    
T  13801866 cacaagaggctgcttccaggacttgaac 13801893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 19142942 - 19143066
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    |||||||||| || ||||| |||| |||  |||||| ||||| || ||||||||||||||||| ||||||||| || ||||| ||||||| |||||| ||    
T  19142942 aaaagggcaggccagtgcactaaatctcccgcatacgcatggtcc-gggaaggggtcccacca-tttggtgtactgtacgcagccttaccctgtttt-ta 19143038  T
Q  281 cagaaagggttgtttccaagacttgaac 308  Q
    || ||  ||||||||||| |||||||||    
T  19143039 cacaagaggttgtttccaggacttgaac 19143066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 39301217 - 39301134
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||||| |||||||| |||  ||||| ||||||| |||||| |||| ||  ||||||| |||||||||||||    
T  39301217 ccgggaaggggtcccacctttttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttgaac 39301134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 12575660 - 12575741
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaac 264  Q
    ||||||||||||||||||  |||||||  |||||| || || || || ||||||||||||||||||||||||||| |||||||    
T  12575660 aaagggcagcccggtgcaccaaagctcctgcatacgcagggtccagg-aaggggtcccaccattttggtgtattgtacgcaac 12575741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 20135699 - 20135641
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||    
T  20135699 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 8170026 - 8170106
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||  |||| ||| || |||||||| |||||||||    
T  8170026 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttt--tacacaaaaggctgtttccaggacttgaac 8170106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 268
Target Start/End: Original strand, 12477162 - 12477205
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaacctta 268  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  12477162 ccgggaaggggtcccaccattttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 27328846 - 27328763
Alignment:
Q  226 cgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||| |||||| |||| ||  |  |||||||| |||||||||    
T  27328846 cgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaac 27328763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 39079755 - 39079824
Alignment:
Q  186 ggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattg 256  Q
    |||||||| ||||| |||| |||  | |||||||||| || ||||||||||||||||||||||||||||||    
T  39079755 ggcagccctgtgcactaaaactcccgtatacacatggtcc-gggaaggggtcccaccattttggtgtattg 39079824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 28516477 - 28516558
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||| |||||||||||||||| ||||||| ||||| || || | |||||| |||| ||  || ||||||||||||||||||    
T  28516477 gggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttccaagacttgaac 28516558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 32703559 - 32703464
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||| ||||||||| || |||||  |||||  || || || ||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  32703559 taaaagggcaacccggtgcactagagctcccgcatatgcagggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 32703464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 35710404 - 35710360
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttacc 270  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||    
T  35710404 ccgggaaggggtcccaccattt-ggtgtattgaacgcagccttacc 35710360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 308
Target Start/End: Complemental strand, 41014456 - 41014330
Alignment:
Q  179 ttaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttc 278  Q
    ||||||||||| ||||||||| ||||||||  |||||  |  || || || ||||||||||||||||| ||||||||| ||||| ||||||| ||||||     
T  41014456 ttaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccagg-aaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt- 41014360  T
Q  279 tacagaaagggttgtttccaagacttgaac 308  Q
    |||| ||  || |||||||| |||||||||    
T  41014359 tacacaagaggctgtttccaggacttgaac 41014330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 43334298 - 43334245
Alignment:
Q  225 ccgggaaggggtcccacca-ttttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||    
T  43334298 ccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttt 43334245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 16880647 - 16880745
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctac 281  Q
    |||||| | ||||||||| ||||||||  |||||| ||||| || |||||| |||| |||||||| ||||||||| ||||| ||||||| |||||| |||    
T  16880647 aaagggaaacccggtgcactaaagctcccgcatacgcatggtcc-gggaagtggtcacaccattt-ggtgtattgtacgcagccttaccctgttttttac 16880744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 256
Target Start/End: Complemental strand, 16957451 - 16957377
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattg 256  Q
    |||||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||| ||||||||||||    
T  16957451 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccacca-tttggtgtattg 16957377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 30006456 - 30006397
Alignment:
Q  186 ggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattt 246  Q
    |||| ||||||||| ||||||||  ||||||| | ||||||||||||||||||||||||||    
T  30006456 ggcaacccggtgcactaaagctcccgcatacata-ggccccgggaaggggtcccaccattt 30006397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 7097803 - 7097853
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  7097803 cgggaaggggtctcaccattt-ggtgtattgtacgcaaccttaccctgtttt 7097853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 256
Target Start/End: Original strand, 10306516 - 10306547
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattg 256  Q
    ||||||||||||||||||||||||||||||||    
T  10306516 ccgggaaggggtcccaccattttggtgtattg 10306547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 11657742 - 11657785
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttac 269  Q
    ||||||||||||||||||||||||||||||| | ||| ||||||    
T  11657742 cgggaaggggtcccaccattttggtgtattgtatgcagccttac 11657785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 277
Target Start/End: Complemental strand, 3771477 - 3771381
Alignment:
Q  179 ttaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||||| ||||||||   |||||||| |   |||||||||||||||||||  |||||||||||  | || ||||||| ||||||    
T  3771477 ttaaaagggcagcccggtgcactaaagctcccacatacaca-gagtccgggaaggggtcccacca-attggtgtattgttcacagccttaccctgtttt 3771381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 34154856 - 34154900
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttacc 270  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||    
T  34154856 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttacc 34154900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 7368489 - 7368438
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| || ||||||||| ||||| ||||||| ||||||    
T  7368489 ccgggaaggggtcccaccaatt-ggtgtattgtacgcagccttaccctgtttt 7368438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 308
Target Start/End: Original strand, 42924894 - 42924958
Alignment:
Q  244 ttttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||| ||||||||||||| |||||| |||| ||   ||||||| || |||||||||    
T  42924894 ttttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaac 42924958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 10668387 - 10668259
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttc 278  Q
    |||||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||||| ||||||||||| ||||||||||||||||||||     
T  10668387 taaaagggcaacccggtgcactaaagctcccgcatacgcagggacc-gggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttt 10668289  T
Q  279 tacagaaagggttgtttccaagacttgaac 308  Q
    |||| ||  || |||||||| |||||||||    
T  10668288 tacacaagaggctgtttccaggacttgaac 10668259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 46247952 - 46248110
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| |||||| || ||||||||  |||||| || || || |||||||||||||||||||| ||||||||| |||||  |||||| |||||| ||    
T  46247952 aaaagggcaacccggtacactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcagtcttaccctgtttttta 46248049  T
Q  281 cagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
    || ||  || |||||||||||||||||| | ||||   ||||||||||  ||||||||||||||    
T  46248050 cacaagaggctgtttccaagacttgaacccgtgac---atttcagtcacatgacaacaacttta 46248110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 50812099 - 50812005
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||| ||||||||||||||  |||||| || ||| | |||||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  50812099 aaaagggcagcccagtgcattaaagctcccgcatacgcagggcgc-gggaaggggtcc-accattttggtgtattgtacgcaaccttaccctgtttt 50812005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 27136696 - 27136776
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| ||  ||||||| |||  ||||||||    
T  27136696 ggaaggggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaac 27136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 31442431 - 31442515
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttg-ttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||| || |||| |||| ||| || |||||| |||||||||||    
T  31442431 ccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctgtttttttacataaaaggctgtttctaagacttgaac 31442515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 14617199 - 14617039
Alignment:
Q  179 ttaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttc 278  Q
    ||||||||| | ||||||||| ||||||||  |||||  || || || |||||||| ||||||||||| ||||||||| |||||||||||||||||| |     
T  14617199 ttaaaagggtaacccggtgcactaaagctcccgcatatgcagggtcc-gggaagggatcccaccattt-ggtgtattgtacgcaaccttaccttgttatt 14617102  T
Q  279 tacagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
    |||| ||  || |||||||| ||||||||| | ||||    |||||||||  ||||||||||||||    
T  14617101 tacacaagaggctgtttccaggacttgaactcgtgac---ctttcagtcacatgacaacaacttta 14617039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 35005287 - 35005157
Alignment:
Q  178 attaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttt 276  Q
    |||||||||||| ||||||||| |||||| |  |||||| || || || ||||||||||||||||||||| ||||||||| | ||| ||||||| |||||    
T  35005287 attaaaagggcaacccggtgcactaaagcgcccgcatacgcagggtcc-gggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttt 35005189  T
Q  277 tctacagaaagggttgtttccaagacttgaac 308  Q
    | |||| ||  || ||||| ||||||||||||    
T  35005188 tttacacaagaggctgttttcaagacttgaac 35005157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 30395768 - 30395852
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||| |||| ||  || |||||||| |||||||||    
T  30395768 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaac 30395852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 4349796 - 4349703
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 4349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 9939625 - 9939463
Alignment:
Q  179 ttaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||| | ||||||||| ||||||||  |||||| || || ||  | | |||||||||||||||| ||||||||| ||||||||||||| |||||     
T  9939625 ttaaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttc 9939526  T
Q  278 ctacagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttt 343  Q
     || | ||  ||||||||||| ||||||||| | ||||    |||||||||  |||||||||||||    
T  9939525 ttaaacaagaggttgtttccaggacttgaactcgtgac---ctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 19932795 - 19932909
Alignment:
Q  225 ccgggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttc 323  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||| |||| ||| |||||| ||||  |||||||| ||||||    ||||    
T  19932795 ccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacacaaa-ggttgtatcca--acttgaacccatgac---ctttc 19932888  T
Q  324 agtcatgtgacaacaacttta 344  Q
    |||||  ||||||||||||||    
T  19932889 agtcacatgacaacaacttta 19932909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 349
Target Start/End: Complemental strand, 27201765 - 27201643
Alignment:
Q  225 ccgggaaggggtcccacca-ttttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttc 323  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||| |||||   ||| ||  || |||||||| ||||||||| ||||||    ||||    
T  27201765 ccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgac---ctttc 27201669  T
Q  324 agtcatgtgacaacaactttatcatt 349  Q
    |||||  |||||||||||||| ||||    
T  27201668 agtcacatgacaacaactttaccatt 27201643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 344
Target Start/End: Original strand, 32632601 - 32632713
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcagt 326  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||| |||||| |||| ||  || |||||||| ||||||||| | ||||    |||||||    
T  32632601 gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgac---ctttcagt 32632695  T
Q  327 catgtgacaacaacttta 344  Q
    ||| ||||||||||||||    
T  32632696 catatgacaacaacttta 32632713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 17470390 - 17470503
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcagtc 327  Q
    |||| ||||||||| |||||||||||||| ||||| ||||||| |||||| |||| ||  || |||||| | ||||||||| ||||||     |||||||    
T  17470390 ggaacgggtcccactattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgac---cattcagtc 17470486  T
Q  328 atgtgacaacaacttta 344  Q
    | |||||||||||||||    
T  17470487 acgtgacaacaacttta 17470503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 20004134 - 20004216
Alignment:
Q  227 gggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||  |  || |||||||| |||||||||    
T  20004134 gggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttacacgagaggctgtttccaggacttgaac 20004216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 18741956 - 18742052
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||| | ||||||||| ||||||||| |||||| || || |  ||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||    
T  18741956 aaaagggaaacccggtgcactaaagctctcgcatacgcagggtct-gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttt 18742052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 18944805 - 18944677
Alignment:
Q  181 aaaagggcagcccggtgcattaaa-gctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttc 278  Q
    ||||||||| ||||||||| |||| ||||  |||||| || || || ||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||     
T  18944805 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttt 18944707  T
Q  279 tacagaaagggttgtttccaagacttgaac 308  Q
    |||| ||  || |||||||| | |||||||    
T  18944706 tacacaagaggctgtttccaggccttgaac 18944677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 179 - 267
Target Start/End: Original strand, 19974071 - 19974158
Alignment:
Q  179 ttaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaacctt 267  Q
    ||||||||||||||| ||||| ||||||||  ||||||| | |   ||||||| |||||||| ||||||||||||||| ||||||||||    
T  19974071 ttaaaagggcagccccgtgcactaaagctcccgcatacata-gagtccgggaatgggtcccatcattttggtgtattgtacgcaacctt 19974158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 25468307 - 25468394
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgac 315  Q
    |||||| ||||| ||||||| ||||||||| ||||||||||||| || ||| |||| ||  ||||||||||| ||||||||| ||||||    
T  25468307 gggaagaggtccaaccattt-ggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgac 25468394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 229 - 309
Target Start/End: Original strand, 45264445 - 45264525
Alignment:
Q  229 gaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaaca 309  Q
    |||||||||||||||||||||||||||| || || ||||||  |||||| | || ||  ||||||||||| ||||||||||    
T  45264445 gaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtttccaggacttgaaca 45264525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 46991920 - 46991838
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||||||||  ||||||||| || || ||||||| |||||| |||| ||  ||||||||||| |||||||||    
T  46991920 ccgggaaggggtcccaccattc-ggtgtattgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaac 46991838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 19656103 - 19656228
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    |||||||||||||||||||||||||||||| |||||  || ||  ||  ||| |||||| ||||||||||||||||| ||  | | ||||| |||||| |    
T  19656103 taaaagggcagcccggtgcattaaagctcttgcatatgca-gggtccaagaaagggtcctaccattttggtgtattgtacatagcgttaccatgtttttt 19656201  T
Q  280 acagaaagggttgtttccaagacttga 306  Q
    ||| ||  || |||||||||| |||||    
T  19656202 acacaagaggctgtttccaagccttga 19656228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 22930114 - 22930224
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcagtc 327  Q
    |||||||||||||||| ||||||||||||  | |||||||||| |||||| |||| ||| || |||||||| ||||||||| ||||||    ||||||||    
T  22930114 ggaaggggtcccacca-tttggtgtattg-tcacaaccttaccctgtttt-tacacaaaaggctgtttccaggacttgaacccatgac---ctttcagtc 22930207  T
Q  328 atgtgacaacaacttta 344  Q
    |  ||||||||||||||    
T  22930208 acatgacaacaacttta 22930224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 47214623 - 47214574
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  47214623 gggaaggggtcccaccattt-ggtgtattgtacgcaaccttaccctgtttt 47214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 270
Target Start/End: Complemental strand, 19701730 - 19701642
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttacc 270  Q
    ||||||| |||| |||||| ||||||||  |||||| || || || ||||||||| |||||||||||||||||||| || || |||||||    
T  19701730 aaaagggtagcctggtgcactaaagctcccgcatacgcagggtcc-gggaaggggccccaccattttggtgtattgtacccatccttacc 19701642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 23768364 - 23768444
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||| |||||||||||| ||||||||| ||||| ||||||| |||||| |||| ||  || |||||||| |||||||||    
T  23768364 gggaaggtgtcccaccattt-ggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaac 23768444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 277
Target Start/End: Complemental strand, 33223093 - 33223048
Alignment:
Q  232 ggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||||||||| |||||||||| || ||||||    
T  33223093 ggggtcccaccattttggtgtattgtacgcaacctttccctgtttt 33223048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 42304249 - 42304302
Alignment:
Q  225 ccgggaaggggtcccacca-ttttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||| ||||||    
T  42304249 ccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgtttt 42304302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 344
Target Start/End: Original strand, 2435833 - 2435944
Alignment:
Q  230 aaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcagtcat 329  Q
    ||||||||||||||||||||||||||| |||||  |||||| | ||||  ||| |   || |||||||| ||||||||| | ||||    |||||||||     
T  2435833 aaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgac---ctttcagtcac 2435929  T
Q  330 gtgacaacaacttta 344  Q
    |||||||||||||||    
T  2435930 gtgacaacaacttta 2435944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 21910692 - 21910735
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttacc 270  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  21910692 cgggaaggggtcccaccattt-ggtgtattgtacgcaaccttacc 21910735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 35253229 - 35253280
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  35253229 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 35253280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 344
Target Start/End: Original strand, 34725096 - 34725253
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    |||||||||| ||||||||| || |||||  |||||  || || || ||||||||||||||||| ||| |||||||| ||||| ||||||| |||||  |    
T  34725096 taaaagggcaacccggtgcactagagctcccgcatatgcagggtcc-gggaaggggtcccacca-tttagtgtattgtacgcagccttaccctgttt--t 34725191  T
Q  280 acagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
    ||| ||  || |||||||| ||||||||| | ||||    |||||||||  ||||||||||||||    
T  34725192 acacaagaggctgtttccaggacttgaacccgtgac---ctttcagtcacatgacaacaacttta 34725253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 351
Target Start/End: Original strand, 6983809 - 6983973
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    ||||||||||||||||||||  |||||||  || ||| || ||  |||| |||||||||||||| |||||||||||| |||||  |||||| |||||| |    
T  6983809 taaaagggcagcccggtgcaccaaagctcctgcctacgca-gggtccggaaaggggtcccacca-tttggtgtattgtacgcatacttaccctgtttttt 6983906  T
Q  280 acagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaactttatcattgc 351  Q
    | |  |  || |||||||| |||||||||   ||||    ||||||||| ||||||||||||||| ||||||    
T  6983907 atacga--ggctgtttccaggacttgaacctgtgac---ctttcagtcacgtgacaacaactttaccattgc 6983973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 10378781 - 10378830
Alignment:
Q  229 gaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    |||||||||||||||||| ||||||||| ||||| ||||||| ||||||||    
T  10378781 gaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttct 10378830  T

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Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 20999848 - 20999948
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    |||||||||||||||||||| ||||||||  || ||| || ||  || |||||||| |||| || |||||||||||| ||||| |||| ||||||||| |    
T  20999848 taaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgcc-ggaaggggccccatca-tttggtgtattgtacgcagccttgccttgtttttt 20999945  T
Q  280 aca 282  Q
    |||    
T  20999946 aca 20999948  T

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Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 24564441 - 24564379
Alignment:
Q  245 tttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaa 307  Q
    ||||||| |||| ||||| ||||||| |||||| |||| ||  ||||||||||||||||||||    
T  24564441 tttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaa 24564379  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 35117808 - 35117925
Alignment:
Q  225 ccgggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttc 323  Q
    |||||||||||||||| |||||| ||||||||| || || ||||||| ||| || |||| ||  || | |||||| ||||||||| | ||||    ||||    
T  35117808 ccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacc---tttc 35117904  T
Q  324 agtcatgtgacaacaacttta 344  Q
    ||||| |||||||||||||||    
T  35117905 agtcacgtgacaacaacttta 35117925  T

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Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 44485151 - 44485228
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagact 303  Q
    |||||||||||||| ||||||| ||||||||| ||||| ||||||| ||| || |||| ||  ||||||||||| ||||    
T  44485151 ccgggaaggggtccaaccattt-ggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggact 44485228  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 282
Target Start/End: Original strand, 15511150 - 15511249
Alignment:
Q  184 agggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaa--cgcaaccttaccttgttttctac 281  Q
    |||||||||||||||| ||||||||   ||||| || ||  || ||||||||| ||||||||||||||||||| |  |||| ||||||| |||||| |||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgca-gggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttac 15511248  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 18724587 - 18724702
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    ||||||||||||||||  |||| ||||||||| || || ||||||| |||||| |||| ||  || |||||||| ||||||||| | ||||    |||||    
T  18724587 ccgggaaggggtcccaagattt-ggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgac---ctttca 18724682  T
Q  325 gtcatgtgacaacaacttta 344  Q
    ||||  ||||||||||||||    
T  18724683 gtcacatgacaacaacttta 18724702  T

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Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 20036337 - 20036293
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttacc 270  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||    
T  20036337 ccgggaaggggttccaccattt-ggtgtattgaacgcaatcttacc 20036293  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 30555274 - 30555210
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattt 246  Q
    |||||| |||||||||||| ||||||||| |||||| || ||  ||| ||||||||||||||||||    
T  30555274 aaaaggtcagcccggtgcactaaagctctcgcatacgca-gggtccgtgaaggggtcccaccattt 30555210  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 39215002 - 39215083
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||| |||||||||||||  ||||| ||||| |||||||  ||||| |||| ||  |||||||||||  ||||||||    
T  39215002 gggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaagaggttgtttccagtacttgaac 39215083  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 11596625 - 11596547
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||| |||||||||||  ||||| ||||||| |||||| |||| ||  ||||||||| | |||||||||    
T  11596625 ggaaggggtcccacca-tttggtgtattatacgcagccttaccctgtttt-tacacaagaggttgtttctaggacttgaac 11596547  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 12126879 - 12126930
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||| |||| ||||||||| ||||| ||||||| ||||||    
T  12126879 ccgggaaggggtcccacaattt-ggtgtattgtacgcagccttaccctgtttt 12126930  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 242
Target Start/End: Complemental strand, 37299632 - 37299573
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccacc 242  Q
    |||||||||||  ||||| ||||||||| |||| |||||||  ||||||||||||||||||    
T  37299632 aaagggcagcctagtgcactaaagctctcgcatgcacatgg-tccgggaaggggtcccacc 37299573  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 39802726 - 39802762
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatac 216  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  39802726 taaaagggcagcccggtgcactaaagctcttgcatac 39802762  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 41319849 - 41319904
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    ||||||||||||||| ||||| ||||||||| ||||| ||||||| |||||| ||||    
T  41319849 cgggaaggggtcccatcattt-ggtgtattgtacgcagccttaccctgttttttaca 41319904  T

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Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 315
Target Start/End: Original strand, 40272811 - 40272943
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| ||||||||| ||||||||  |||||| || || || |||||||||||||||||||| ||||||||| ||||| ||||||| |||||| ||    
T  40272811 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttttta 40272908  T
Q  281 cagaaagggttgtttccaagacttgaacacatgac 315  Q
    || ||  ||||||||||| ||||||||| ||||||    
T  40272909 cacaagaggttgtttccaggacttgaacccatgac 40272943  T

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Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 315
Target Start/End: Original strand, 53996564 - 53996697
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||||||||||||| ||||||||   ||||| ||  | |  |||||||||||||||||||||||||||||| | ||| ||||||| |||||| ||    
T  53996564 aaaagggcagcccggtgcactaaagctcccacatacgcagtgtca-gggaaggggtcccaccattttggtgtattgtaagcagccttaccctgtttttta 53996662  T
Q  281 cagaaagggttgtttccaagacttgaacacatgac 315  Q
    || ||  ||||||||||| ||||||||||| ||||    
T  53996663 cacaagaggttgtttccacgacttgaacacgtgac 53996697  T

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Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 34420685 - 34420801
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    |||||||||||||||||||||||||||||| | ||||| ||||||| |||||| |||| ||  || |||||||| ||||||||| | ||||    |||||    
T  34420685 ccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgac---ctttca 34420781  T
Q  325 gtcatgtgacaacaacttta 344  Q
    |||| |||||||||||||||    
T  34420782 gtcacgtgacaacaacttta 34420801  T

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Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 54374387 - 54374470
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||||| | |||| |||| ||  |||||||||||||||||||||    
T  54374387 ccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagacttgaac 54374470  T

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Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 343
Target Start/End: Original strand, 13628788 - 13628948
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttc 278  Q
    |||||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||||| ||||||||||| ||||| ||||||| |||||      
T  13628788 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttct 13628886  T
Q  279 tacagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttt 343  Q
    |||| ||  || |||||||| ||||||||| | ||||    |||||||||  |||||||||||||    
T  13628887 tacacaagaggctgtttccaggacttgaacccgtgac---ctttcagtcacatgacaacaacttt 13628948  T

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Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 343
Target Start/End: Original strand, 5173718 - 5173876
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttttct 279  Q
    ||||||||| ||||||||| ||||||||  |||||| || || || ||||||||| ||||||||||| ||||||||| | |||||||||| ||||||| |    
T  5173718 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtcc-gggaaggggccccaccatttttggtgtattgcatgcaaccttactttgtttt-t 5173815  T
Q  280 acagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttt 343  Q
    ||| ||  ||||||||||| ||||||||| | ||||    |||||||||  |||||||||||||    
T  5173816 acacaagaggttgtttccaggacttgaacccgtgac---ctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 54484849 - 54484755
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||| ||||||||| ||||||||  |||||| || || || |||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  54484849 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccttgtttt 54484755  T

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Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 8247729 - 8247846
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttc 323  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||||||| |||||| |||| ||  || |||||||| ||||||||| | ||||    ||||    
T  8247729 ccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgac---ctttc 8247825  T
Q  324 agtcatgtgacaacaacttta 344  Q
    |||||  ||||||||||||||    
T  8247826 agtcacatgacaacaacttta 8247846  T

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Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 22609921 - 22609799
Alignment:
Q  183 aagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    ||||||| ||||||||| | ||||||  |||||| || || || ||||||||||||||||| |||||||||||| ||||| ||||||| |||||| ||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt-taca 22609825  T
Q  283 gaaagggttgtttccaagacttgaac 308  Q
     ||  || ||||||||||||||||||    
T  22609824 caagaggctgtttccaagacttgaac 22609799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 25517168 - 25517263
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||| ||||||||| |||||||| ||||||| || ||  ||||||||||||||||||||||| |||||||| ||||| || || ||||||||    
T  25517168 taaaagggcaacccggtgcactaaagctccagcatacgca-ggatccgggaaggggtcccaccatttt-gtgtattgtacgcagccatatcttgtttt 25517263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 45786214 - 45786314
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccacca-ttttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    |||||||| ||||||||| |||||||| ||||| | || || || ||||||||||||||||| ||||||||||||| ||||| ||||||| |||||| ||    
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtcc-gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttta 45786312  T
Q  281 ca 282  Q
    ||    
T  45786313 ca 45786314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 46421033 - 46421161
Alignment:
Q  181 aaaagggcagcccggtgca-ttaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttc 278  Q
    |||||||||  |||||||| |||||||||  |||||| || || || ||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||     
T  46421033 aaaagggcaaaccggtgcacttaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 46421131  T
Q  279 tacagaaagggttgtttccaagacttgaac 308  Q
    |||| ||  || |||||||| |||||||||    
T  46421132 tacacaagaggctgtttccaggacttgaac 46421161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 277
Target Start/End: Complemental strand, 39203671 - 39203578
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||| ||||||||| ||||||||  |||||  || || || |||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcaaccttaccctgtttt 39203578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 26573282 - 26573127
Alignment:
Q  184 agggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacag 283  Q
    ||||||||| |||||| ||||||||  |||||| || || || |||| |||||||||||| || ||||||||| ||||| ||||||| |||||| ||||     
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtcc-gggatggggtcccaccaatt-ggtgtattgtacgcagccttaccctgttttttacac 26573185  T
Q  284 aaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
    |   || |||||||| ||||||||| | ||||    ||||||||| |||||||||||||||    
T  26573184 aggaggctgtttccaggacttgaacccgtgacc---tttcagtcacgtgacaacaacttta 26573127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 29366718 - 29366846
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttc 278  Q
    |||||||||| ||| ||||| ||||||||   ||||| || || || ||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||     
T  29366718 taaaagggcaacccagtgcactaaagctcccacatacgcagggtcc-gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 29366816  T
Q  279 tacagaaagggttgtttccaagacttgaac 308  Q
    || | ||  || |||||||| |||||||||    
T  29366817 tatacaagaggctgtttccaggacttgaac 29366846  T

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Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 829441 - 829528
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttac 269  Q
    |||||| ||| |||||||| ||||||||  |||||| || ||  | |||||||||||||||||||||||||||||| ||||||| ||||    
T  829441 aaaaggacagaccggtgcactaaagctcctgcatacgcagggttc-gggaaggggtcccaccattttggtgtattgtacgcaactttac 829528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 13730644 - 13730728
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||||| || || ||||||| |||||| |||| ||  || |||||||| |||||||||    
T  13730644 ccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaac 13730728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 14987074 - 14986990
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||| ||||||||||||| ||||||||||| ||||| ||||||| |||||| |||| ||  || |||||||| |||||||||    
T  14987074 ccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaac 14986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 26869864 - 26869770
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||| |||||||||  |||||||  |||||| ||||| || || ||||||||||||||||| ||||||||| ||||| ||||||| ||||||    
T  26869864 aaaagggcaacccggtgcaccaaagctcccgcatacgcatggtcc-ggcaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt 26869770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 34771363 - 34771457
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| || |||||  |||||  || ||  ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  34771363 aaaagggcagcccggtgcactagagctcccgcatatgca-gggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 344
Target Start/End: Complemental strand, 25944583 - 25944469
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcagt 326  Q
    |||||||||||||||||||||||||||||| || || |||| ||  ||||| ||||  |  ||  ||||||| ||||||||| ||||||    |||||||    
T  25944583 gggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacacgagaggcggtttccaggacttgaacccatgac---ctttcagt 25944487  T
Q  327 catgtgacaacaacttta 344  Q
    || |||||||||||||||    
T  25944486 cacgtgacaacaacttta 25944469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 49013515 - 49013590
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaa 299  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||| |||| ||  || |||||||||    
T  49013515 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaa 49013590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 353391 - 353449
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||| ||||    
T  353391 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 353449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 22122918 - 22123010
Alignment:
Q  183 aagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||| ||||||||| || |||||| |||||  || || || ||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 22123010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 45139520 - 45139602
Alignment:
Q  227 gggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||| | ||| ||||||| ||| || |||| ||  |||||||||||| ||||||||    
T  45139520 gggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaac 45139602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 10795468 - 10795549
Alignment:
Q  228 ggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||| ||| || |||| ||  || |||||||| |||||||||    
T  10795468 ggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaac 10795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 6411866 - 6411952
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgac 315  Q
    |||||||||||||| ||||| ||||||||| ||||| ||||||| |||||| |||| ||  || ||||| |||||||||||| ||||||    
T  6411866 gggaaggggtcccatcattt-ggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttacaagacttgaacccatgac 6411952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 12914033 - 12914159
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    |||||||||| ||||||||||| ||||||  |||||  || || |  ||||||||||| |||||||| ||||||||| ||||  ||||||| |||||| |    
T  12914033 taaaagggcaacccggtgcattgaagctcccgcatatgcagggtct-gggaaggggtctcaccattt-ggtgtattgtacgccgccttaccctgtttttt 12914130  T
Q  280 acagaaagggttgtttccaagacttgaac 308  Q
    ||| ||  || |||||||| |||||||||    
T  12914131 acacaagaggctgtttccaggacttgaac 12914159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 15797335 - 15797284
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  15797335 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 15797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 16735555 - 16735504
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  16735555 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 16735504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 47624156 - 47624105
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  47624156 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 47624105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 30928189 - 30928271
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||| ||| || ||||||||  || ||||||||||||||||| |||| ||  || |||||||| |||||||||    
T  30928189 ccgggaaggggtcccgccaatt-ggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaac 30928271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 315
Target Start/End: Complemental strand, 33926195 - 33926109
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgac 315  Q
    |||||||||||||||||| |||||||||| || || ||||||| |||||| |||| ||  || | |||||| ||||||||| ||||||    
T  33926195 ggaaggggtcccaccattatggtgtattgtacacagccttaccctgtttt-tacacaagaggctatttccaggacttgaacccatgac 33926109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 259
Target Start/End: Complemental strand, 38425297 - 38425266
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaac 259  Q
    ||||||||||||||||||||||||||||||||    
T  38425297 ggaaggggtcccaccattttggtgtattgaac 38425266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 516570 - 516442
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccacca--ttttggtgtattgaacgcaaccttaccttgttttc 278  Q
    ||||||||| ||||||||| ||||||||  |||||| || || |  ||||||||||||| |||  ||||||| |||||  |||| ||||||| ||||||     
T  516570 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcg-gggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttt 516472  T
Q  279 tacagaaagggttgtttccaagacttgaac 308  Q
    |||| ||  || |||||||| |||||||||    
T  516471 tacacaagaggctgtttccaggacttgaac 516442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 44403554 - 44403646
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgt 274  Q
    |||| |||||||||||||| |||||||  |||||||  | ||  ||||||||||||||||||||||||  |||||   |||| |||||||||||    
T  44403554 aaaaaggcagcccggtgcactaaagcttcagcatacgta-gggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgt 44403646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 1217203 - 1217152
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||| |||||| ||||||||| ||||| ||||||| ||||||    
T  1217203 ccgggaaggggtcccgccattt-ggtgtattgtacgcagccttaccctgtttt 1217152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 344
Target Start/End: Complemental strand, 9607318 - 9607203
Alignment:
Q  227 gggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcag 325  Q
    |||||||||||||| |||| ||||||||||  ||||| ||||||| |||||| |||  ||  || |||||||| |||||||||  |||||    ||||||    
T  9607318 gggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacc---tttcag 9607222  T
Q  326 tcatgtgacaacaacttta 344  Q
    |||  ||||||||||||||    
T  9607221 tcacatgacaacaacttta 9607203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 31592962 - 31592911
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||| |||||||||||| ||||||||| ||||| ||||||| ||||||    
T  31592962 ccgggaaggagtcccaccattt-ggtgtattgtacgcagccttaccctgtttt 31592911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 52926218 - 52926304
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttac 269  Q
    ||||||||| ||||||||  ||||||||  |||||| || || || ||||||| ||||||||| |||||||||||| ||||| ||||||    
T  52926218 aaaagggcaacccggtgcgctaaagctcccgcatacgcagggtcc-gggaaggtgtcccacca-tttggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 54175201 - 54175105
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| ||||||||  |||||  || || || |||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  54175201 aaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttt 54175105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 282
Target Start/End: Original strand, 20639657 - 20639757
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| ||||||||| ||||||||  |||||| || || || |||||||||||||||||||||||||||||| ||||| ||||||| |||||| ||    
T  20639657 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttta 20639755  T
Q  281 ca 282  Q
    ||    
T  20639756 ca 20639757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 487187 - 487292
Alignment:
Q  236 tcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgaca 335  Q
    |||||||||||| |||||||| ||||| | |||||||||||| |||| ||  ||||||||||||||||||||| | ||||    |||||||||  |||||    
T  487187 tcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgac---ctttcagtcacatgaca 487283  T
Q  336 acaacttta 344  Q
    |||||||||    
T  487284 acaacttta 487292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 20225075 - 20224962
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||  |||| ||  ||||||||||| ||||||||| ||||||    |||||    
T  20225075 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttt--tacacaagaggttgtttccaggacttgaacccatgac---ctttca 20224982  T
Q  325 gtcatgtgacaacaacttta 344  Q
    ||||  ||||||||||||||    
T  20224981 gtcacatgacaacaacttta 20224962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 23501925 - 23501824
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttct 279  Q
    ||||||||| ||||||||| ||||||||  |||||  || || || ||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |    
T  23501925 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtcc-gggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgtttttt 23501827  T
Q  280 aca 282  Q
    |||    
T  23501826 aca 23501824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 30581507 - 30581624
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttg-ttttctacagaaagggttgtttccaagacttgaacacatgactgaatttc 323  Q
    |||||||||||||||||||||||||||||||| || || ||||||| || |||| |||| ||  ||||||||||| ||||||||| | ||||    |||     
T  30581507 ccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaacccttgac---ctttt 30581603  T
Q  324 agtcatgtgacaacaacttta 344  Q
    ||| |||||||||||||||||    
T  30581604 agtgatgtgacaacaacttta 30581624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 315
Target Start/End: Complemental strand, 35567306 - 35567174
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||||||||||||| ||||||||  ||| || || ||  | |||||||||||||||||||| ||||| ||| || || ||||||| |||||| ||    
T  35567306 aaaagggcagcccggtgcactaaagctcccgcagacgcagggttc-gggaaggggtcccaccattt-ggtgtgttgtacacagccttaccctgtttttta 35567209  T
Q  281 cagaaagggttgtttccaagacttgaacacatgac 315  Q
    || ||  || |||||||||||||||||| ||||||    
T  35567208 cacaagtggctgtttccaagacttgaacccatgac 35567174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 20908635 - 20908730
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||  ||||| ||||||||  |||||| || ||  | |||||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  20908635 aaaagggcagccttgtgcactaaagctcccgcatacgcagggttc-gggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttt 20908730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 282
Target Start/End: Original strand, 51865035 - 51865136
Alignment:
Q  179 ttaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttc 278  Q
    |||||||||||| |||||||| ||||||||  |||||| || ||  ||||||||||| ||||||| |||||||||||| ||||| ||||||| ||||||     
T  51865035 ttaaaagggcagtccggtgcaataaagctcccgcatacgca-gggtccgggaaggggccccacca-tttggtgtattgtacgcagccttaccatgttttt 51865132  T
Q  279 taca 282  Q
    ||||    
T  51865133 taca 51865136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 48598824 - 48598980
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| ||||||||| || |||||  |||||  ||||| || ||||||||||||||||| |||||||||||| ||||| ||||||| |||||  ||    
T  48598824 aaaagggcaacccggtgcactagagctccggcatatgcatggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttt--ta 48598919  T
Q  281 cagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
    || ||  || |||||||| ||||||||| | ||||    |||||||||  ||||||||||||||    
T  48598920 cacaagaggctgtttccaggacttgaacccgtgac---ctttcagtcacatgacaacaacttta 48598980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Original strand, 35894503 - 35894560
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    |||||||||||||||||||||||||||||||| |||||  |||||| |||||| ||||    
T  35894503 ccgggaaggggtcccaccattttggtgtattgtacgcacacttaccgtgttttttaca 35894560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 5306706 - 5306787
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| || ||| |||| ||  || |||||||| |||||||||    
T  5306706 ccgggaaggggtcccacca-tttggtgtattgtacgcaaccttaccctgattt-tacacaagaggctgtttccaggacttgaac 5306787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 5648351 - 5648270
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||| |||| ||  || |||||||| |||||||||    
T  5648351 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaac 5648270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 6430627 - 6430782
Alignment:
Q  183 aagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    ||||||| ||||||||  ||||||||  |||||| || || || |||||| ||||||||||||| ||||||||| ||||| ||||||| |||||| ||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtcc-gggaagtggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-taca 6430723  T
Q  283 gaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
     ||  || |||||||| ||||||||| | ||||    |||||||||  ||||||||||||||    
T  6430724 caagaggctgtttccatgacttgaacccgtgac---ctttcagtcacatgacaacaacttta 6430782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 7909324 - 7909374
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  7909324 cgggaaggggtcccaccattt-ggtgtattgtacgcaaccttaccctgtttt 7909374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 351
Target Start/End: Complemental strand, 19027936 - 19027819
Alignment:
Q  230 aaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcagtcat 329  Q
    |||||||||||||| || ||||||||| ||||| ||||||| |||||| |||| ||   |||||||||| ||||||||| | ||||    |||||||||     
T  19027936 aaggggtcccaccaatt-ggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgac---ctttcagtcac 19027841  T
Q  330 gtgacaacaactttatcattgc 351  Q
    |||||||||||| || ||||||    
T  19027840 gtgacaacaactctaccattgc 19027819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 25463215 - 25463133
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||||||||| ||||| ||| |||||||||| ||  ||||| |||| ||  ||||||||||| |||||||||    
T  25463215 ccgggaaggggtcccaccattt-ggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaac 25463133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 40915921 - 40915840
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||| ||||||||||| ||||||||| ||||| |||||||||||||| |||| ||  || |||||||| |||||||||    
T  40915921 ccgggaagggctcccaccattt-ggtgtattgtacgcagccttaccttgtttt-tacacaagaggctgtttccaggacttgaac 40915840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 47444050 - 47443968
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||||||||| ||||||||| ||||| ||||||| |||||| |||  ||  || |||||||| |||||||||    
T  47444050 ccgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaac 47443968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 308
Target Start/End: Complemental strand, 37494939 - 37494862
Alignment:
Q  230 aaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||| ||| ||||| | ||||||||||| |||||| |||| ||  ||||||||||| |||||||||    
T  37494939 aaggggtcccaccattt-ggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaac 37494862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 17043438 - 17043518
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||| ||| || |||| ||  || |||||||| |||||||||    
T  17043438 gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaac 17043518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 9832355 - 9832406
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  9832355 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 9832406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 16408643 - 16408727
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||| |||||||| ||||||||||| |||||  |||||| |||||| |||| ||  || |||||||| |||||||||    
T  16408643 ccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaac 16408727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 16911657 - 16911573
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||| |||| ||  || |||||| | |||||||||    
T  16911657 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaac 16911573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 29207940 - 29207991
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  29207940 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 29207991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 47528572 - 47528623
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  47528572 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 47528623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 277
Target Start/End: Original strand, 30690176 - 30690269
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||| |||||| ||||||||  |||||| || ||  |||||||||||||||||||  ||||||||||| | ||| ||||||| ||||||    
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgca-gggtccgggaaggggtcccacca-attggtgtattgtatgcagccttaccctgtttt 30690269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 39029102 - 39029185
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||| ||| |||||||||||||| |||||||| || || ||||||| |||||| |||| ||  || |||||||||| |||||||    
T  39029102 ccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaac 39029185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 49796889 - 49796839
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||    
T  49796889 cgggaaggggtcccaccattt-ggtgtattgtacgcagccttaccatgtttt 49796839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 14983927 - 14983846
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaa 307  Q
    ||||||||||||||||||| ||| |||||||| | ||||||||||| | |||| |||| ||  || |||||| ||||||||||    
T  14983927 ccgggaaggggtcccacca-tttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaagacttgaa 14983846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 20225169 - 20225123
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttacc 270  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  20225169 ccgggaaggggtcccaccattattggtgtattgtacgcagccttacc 20225123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 21647057 - 21646975
Alignment:
Q  227 gggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||| ||||| ||||| ||||| ||||||| | |||| |||| ||  || |||||||| |||||||||    
T  21647057 gggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacacaagaggctgtttccaggacttgaac 21646975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 13256442 - 13256499
Alignment:
Q  226 cgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    |||||||||||||||| ||| ||||||||||| ||||| ||||||| |||||| ||||    
T  13256442 cgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttaca 13256499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 20405182 - 20405129
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||||| || |||||||| |||||| |||||| ||||||    
T  20405182 ccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttt 20405129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 307
Target Start/End: Complemental strand, 21489180 - 21489099
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaa 307  Q
    |||||||||||||||||||||||||| |||| |||||  |||||  |||||| |||  ||  || |||||||| ||||||||    
T  21489180 cgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgtttccaggacttgaa 21489099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 36816383 - 36816463
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgca 262  Q
    ||||||||| |||||| || ||||||||  ||||||||| || || || |||| |||||||| ||||||||||||| |||||    
T  36816383 aaaagggcaacccggtacactaaagctcccgcatacacagggtccagg-aaggagtcccacctttttggtgtattgtacgca 36816463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 44363130 - 44363194
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatttt 247  Q
    |||||||| ||||||||| ||||||||  |||||| || || || |||||||||||||||||||||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccatttt 44363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 49938637 - 49938666
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattg 256  Q
    ||||||||||||||||||||||||||||||    
T  49938637 gggaaggggtcccaccattttggtgtattg 49938666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 30639472 - 30639421
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||| |||||||| ||||||||| ||||| ||||||| ||||||    
T  30639472 ccgggaaggggtctcaccattt-ggtgtattgtacgcagccttaccctgtttt 30639421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 33836486 - 33836561
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattg 256  Q
    ||||||||| |||| |||| ||||||||  |||||| || || || ||||||||||||||||||| |||||||||||    
T  33836486 aaaagggcaacccgttgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattattggtgtattg 33836561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 51420646 - 51420586
Alignment:
Q  247 tggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaa 307  Q
    |||||||||| || || ||||||| ||||||||||| ||  ||||||||||| ||||||||    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgacttgaa 51420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 24200622 - 24200782
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttttct 279  Q
    ||||||||| ||||||||| |||||||||  ||||| || || || |||||||| |||||||||||| ||||||||| ||||| ||||||| |||||| |    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtcc-gggaagggttcccaccatttttggtgtattgtacgcagccttaccctgtttttt 24200720  T
Q  280 acagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
    ||| ||  || |||||||| ||||||||| | |||||   |||||||||  ||||||||||||||    
T  24200721 acacaagaggctgtttccaggacttgaacccgtgact---tttcagtcacatgacaacaacttta 24200782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 347
Target Start/End: Complemental strand, 10543835 - 10543673
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttttcta 280  Q
    |||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||||||| ||||||||| ||||| ||||||| |||||| ||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttta 10543737  T
Q  281 cagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaactttatca 347  Q
    || ||  ||  ||||||| ||||||||| | ||||    |||||||||  |||||||||||||||||    
T  10543736 cacaagaggccgtttccaggacttgaacccgtgac---ctttcagtcacatgacaacaactttatca 10543673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 308
Target Start/End: Original strand, 25079717 - 25079842
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttg-ttttcta 280  Q
    |||||||| ||||||||| ||||||||| |||||| || || || |||||||||||||||||||  ||||||||| ||||| |||||||||| |||| ||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtcc-gggaaggggtcccaccattc-ggtgtattgtacgcatccttaccttgttttttta 25079814  T
Q  281 cagaaagggttgtttccaagacttgaac 308  Q
    || ||  ||||||||| |||||||||||    
T  25079815 cacaagaggttgtttctaagacttgaac 25079842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 8455314 - 8455440
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    |||||||||| ||||||||| ||||||||  |||||| || || || |||||||||||||||||||| ||||||||| ||||| ||||||| ||| || |    
T  8455314 taaaagggcaacccggtgcactaaagctccggcatacgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtgtttt 8455411  T
Q  280 acagaaagggttgtttccaagacttgaac 308  Q
    ||| ||  || |||||||| |||||||||    
T  8455412 acacaagaggctgtttccaggacttgaac 8455440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 9671316 - 9671221
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  9671316 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 9671221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 14530455 - 14530296
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    |||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||||| ||||||||||| ||| | ||||||| |||||| ||    
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattattggtgtattgtacgtagccttaccctgtttttta 14530357  T
Q  281 cagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
     | ||  || |||||||| ||||||||| | ||||    |||||||||  ||||||||||||||    
T  14530356 tacaagaggctgtttccaggacttgaacccgtgac---ctttcagtcacatgacaacaacttta 14530296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 10546299 - 10546205
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  10546299 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 10546205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 278
Target Start/End: Complemental strand, 36871627 - 36871533
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttc 278  Q
    ||||||||| ||||||||| ||||||||  |||||| || | ||  |||||||||||||||||||| ||||||||| ||||| ||||||| |||||||    
T  36871627 aaaagggcaacccggtgcactaaagctcccgcatacgcaggtcc--gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttc 36871533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 21779259 - 21779354
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||| ||||||||| || |||||  |||||  || || || |||||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  21779259 taaaagggcaacccggtgcactagagctcccgcatatgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcaaccttaccctgtttt 21779354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 32781332 - 32781412
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||||||| ||||||||| |||||  |||||| |||||| |||| ||  |||||||||| ||||||||||    
T  32781332 gggaaggggtcccaccattt-ggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaac 32781412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 349
Target Start/End: Complemental strand, 5841123 - 5841001
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttc 323  Q
    ||||||||||||||||||||| ||| ||||||| ||||| ||||||| | |||| |||| ||| || |||||| | ||||||||| | ||||    || |    
T  5841123 ccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgac---cttcc 5841027  T
Q  324 agtcatgtgacaacaactttatcatt 349  Q
    |||||  |||||||||||||||||||    
T  5841026 agtcacatgacaacaactttatcatt 5841001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 12023961 - 12024075
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    |||||| ||||||||||||||| ||||||||| ||||| ||||||| |||||| |||| ||  || |||||||| ||||||||| | ||||    |||||    
T  12023961 ccgggagggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgac---ctttca 12024055  T
Q  325 gtcatgtgacaacaacttta 344  Q
    ||||  ||||||||||||||    
T  12024056 gtcacatgacaacaacttta 12024075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 22371147 - 22371096
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  22371147 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 22371096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 29419942 - 29420046
Alignment:
Q  241 ccattttggtgtattgaacgcaaccttacct----tgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaa 336  Q
    |||||||||||||||| ||||| |||||| |    |||||| |||| ||  ||||||||||| ||||||||| | ||||    |||||||||||||||||    
T  29419942 ccattttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacc---tttcagtcatgtgacaa 29420038  T
Q  337 caacttta 344  Q
    ||||||||    
T  29420039 caacttta 29420046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 44449425 - 44449477
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||| | ||||||    
T  44449425 ccgggaaggggtcccactattttggtgtattgtacgcagccttatcctgtttt 44449477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 14444864 - 14444740
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| || |||||| ||||||||  |||||| || || || ||||||||||||||||| |||||||||| | || || ||||||| |||||| ||    
T  14444864 aaaagggcaacctggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccacca-tttggtgtatcgtacacagccttaccctgtttt-ta 14444768  T
Q  281 cagaaagggttgtttccaagacttgaac 308  Q
    || ||  || |||||||| |||||||||    
T  14444767 cacaagaggctgtttccaggacttgaac 14444740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 23488620 - 23488554
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatttt 247  Q
    |||||| ||| ||||||||| ||||||||| |||||| || || || |||||||||||||||||||||    
T  23488620 taaaagagcaacccggtgcactaaagctctcgcatacgcagggtcc-gggaaggggtcccaccatttt 23488554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 276
Target Start/End: Original strand, 25249737 - 25249830
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttt 276  Q
    ||||||||| ||||||||| ||||||||  |||||| || ||  | |||||||| ||||||||||| ||||||||| ||||| ||||||| |||||    
T  25249737 aaaagggcaacccggtgcactaaagctcacgcatacgcagggttc-gggaagggatcccaccattt-ggtgtattgtacgcagccttaccctgttt 25249830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 17623656 - 17623575
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||| ||||||||| ||||||||| ||||| ||||||| || ||| |||| ||  ||||||||| | |||||||||    
T  17623656 cgggaaggggttccaccattt-ggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaac 17623575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 25641593 - 25641513
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||||| |||| ||||||||| ||||||| ||||| ||||||| ||| |||  | |||||||| |||||||||    
T  25641593 cgggaaggggtcccacaattt-ggtgtattgtacgcaactttaccctgttttc-acacaaaatgctgtttccaggacttgaac 25641513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 17380282 - 17380360
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||| ||| ||||| ||||||||| || |||||||||| |||||  |||| ||  |||||||||||||||||||||    
T  17380282 ggaaggggttccatcattt-ggtgtattgcacacaaccttaccctgttta-tacacaagaggttgtttccaagacttgaac 17380360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 24890504 - 24890453
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| || ||||||||| | ||| ||||||||||||||    
T  24890504 ccgggaaggggtcccaccaatt-ggtgtattgtatgcagccttaccttgtttt 24890453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 31821347 - 31821429
Alignment:
Q  186 ggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttacc 270  Q
    ||||||| |||||||||||||||  ||||||||| ||   ||| ||||||||||| || |||||||||||| || ||||||||||    
T  31821347 ggcagccaggtgcattaaagctcccgcatacaca-ggtttcggaaaggggtcccatca-tttggtgtattgtacacaaccttacc 31821429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 44643662 - 44643595
Alignment:
Q  178 attaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattt 246  Q
    |||||||||||||||||||||| ||| ||||  |||||| || ||  | ||||||||||||||||||||    
T  44643662 attaaaagggcagcccggtgcactaaggctcccgcatacgca-gggtctgggaaggggtcccaccattt 44643595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 44530286 - 44530160
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    ||||||| || ||||||||| ||||||||  |||||| || || || || ||||||||||||||||| ||||||||| ||||| ||||||| |||||| |    
T  44530286 taaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccagg-aaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttttt 44530189  T
Q  280 acagaaagggttgtttccaagacttgaac 308  Q
    ||| ||  |||||||||||||||||||||    
T  44530188 acacaagaggttgtttccaagacttgaac 44530160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 225 - 315
Target Start/End: Original strand, 7136569 - 7136660
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgac 315  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||| |||| ||  ||||||||||| ||||||||| ||||||    
T  7136569 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgac 7136660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 282
Target Start/End: Complemental strand, 35261815 - 35261716
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| ||||||||| ||||||||  |||||| || || || || ||||||||||||||||| ||||||||| ||||||||||||| |||||| ||    
T  35261815 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccagg-aaggggtcccaccattt-ggtgtattgtacgcaaccttaccctgtttttta 35261718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 39460992 - 39461120
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttc 278  Q
    |||||||||| ||||||||| ||||||||  |||||| || || || ||||||||||| ||||||| ||||||||||| ||||| ||||||  ||||||     
T  39460992 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttt 39461090  T
Q  279 tacagaaagggttgtttccaagacttgaac 308  Q
    |||| ||  || |||||||| |||||||||    
T  39461091 tacacaagaggctgtttccaggacttgaac 39461120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 36720933 - 36720807
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttct 279  Q
    |||||||||| || |||||| |||||||   |||||| || || || |||||||||||||||||||| ||||||||| ||||| ||||||| |||||| |    
T  36720933 taaaagggcaaccgggtgcactaaagcttccgcatacgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgtttttt 36720836  T
Q  280 acagaaagggttgtttccaagacttgaac 308  Q
    ||| ||  || |||||||| |||||||||    
T  36720835 acacaagaggctgtttccaggacttgaac 36720807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 28817625 - 28817750
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| |||| |||| ||||||||  |||||| || || || ||||||||||||||||| || ||||||||| ||||| ||||||| |||||| ||    
T  28817625 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccacca-ttgggtgtattgtacgcagccttaccctgtttttta 28817722  T
Q  281 cagaaagggttgtttccaagacttgaac 308  Q
    || ||  || |||||||| |||||||||    
T  28817723 cacaagaggctgtttccaggacttgaac 28817750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 184 - 298
Target Start/End: Complemental strand, 29877227 - 29877115
Alignment:
Q  184 agggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacag 283  Q
    ||||||||| |||||| ||| ||||  |||||| || || || |||||||||||||||||||| ||||||||| ||||| ||||||| |||||| ||||     
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccctgttttttacac 29877130  T
Q  284 aaagggttgtttcca 298  Q
    ||| || ||||||||    
T  29877129 aaaaggctgtttcca 29877115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 44742564 - 44742650
Alignment:
Q  229 gaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgac 315  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||| |||| |   | |||||||||  |||||||| ||||||    
T  44742564 gaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgac 44742650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 5135289 - 5135413
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    |||||||||||||||||||  |||||||  |||||| || || || ||||||||||||||||| |||||||||||| || || ||||||| | |||| ||    
T  5135289 aaaagggcagcccggtgcac-aaagctcctgcatacgcagggtcc-gggaaggggtcccacca-tttggtgtattgtacacagccttaccctctttttta 5135385  T
Q  281 cagaaagggttgtttccaagacttgaac 308  Q
    || ||  || |||||||| |||||||||    
T  5135386 cacaagaggctgtttccaggacttgaac 5135413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 12670292 - 12670405
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||  |||| ||  || |||||||| ||||||||| | ||||    |||||    
T  12670292 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttt--tacacaagaggctgtttccaggacttgaacccgtgac---ctttca 12670385  T
Q  325 gtcatgtgacaacaacttta 344  Q
    ||||  ||||||||||||||    
T  12670386 gtcacatgacaacaacttta 12670405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 30454139 - 30454252
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    ||||||||||||||||||| |||||||||| | ||||| |||||||||||||  |||| ||  || |||||||| ||||||||| | ||||    |||||    
T  30454139 ccgggaaggggtcccacca-tttggtgtatcgtacgcagccttaccttgttt--tacacaagaggctgtttccaggacttgaacccgtgac---ctttca 30454232  T
Q  325 gtcatgtgacaacaacttta 344  Q
    ||||  ||||||||||||||    
T  30454233 gtcacatgacaacaacttta 30454252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 45071398 - 45071306
Alignment:
Q  183 aagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||| ||||||||| | ||||||  |||||| || || || ||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 45071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 6760913 - 6760833
Alignment:
Q  229 gaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||| ||||||||||| ||| | ||||||| |||||| |||| ||  || |||||||| |||||||||    
T  6760913 gaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttacacaagaggctgtttccaggacttgaac 6760833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 8483982 - 8484069
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgac 315  Q
    |||| |||||||||||| || ||||||||| ||||| |||| || |||||| |||| ||  ||||||||||| ||||||||| ||||||    
T  8483982 gggatggggtcccaccaatt-ggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggacttgaacccatgac 8484069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 13160794 - 13160743
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  13160794 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 13160743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 309
Target Start/End: Complemental strand, 25250616 - 25250532
Alignment:
Q  226 cgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaaca 309  Q
    |||||||||||||||||||| ||||||||||| ||||| || |||| | |||| |||| ||  || |||||||| ||||||||||    
T  25250616 cgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaaca 25250532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 344
Target Start/End: Original strand, 42083741 - 42083856
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcag 325  Q
    ||||||||||||||||||||||||| || || ||||| |||| ||   |||| |||| ||| || |||||||| ||||||||| | ||||    ||||||    
T  42083741 cgggaaggggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgac---ctttcag 42083837  T
Q  326 tcatgtgacaacaacttta 344  Q
    ||| |||||||||| ||||    
T  42083838 tcacgtgacaacaatttta 42083856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 344
Target Start/End: Original strand, 44781548 - 44781663
Alignment:
Q  227 gggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcag 325  Q
    |||| ||||||||| |||||| ||||||||| || || ||||||| ||| || |||| ||  ||||||||||| ||||||||| | |||   | ||||||    
T  44781548 gggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtga---actttcag 44781644  T
Q  326 tcatgtgacaacaacttta 344  Q
    ||| |||||||||||||||    
T  44781645 tcacgtgacaacaacttta 44781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 304
Target Start/End: Original strand, 8897806 - 8897884
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagactt 304  Q
    ||||||||||||||||||| |||||||||||| ||| | ||||||| | |||| |||| ||  ||||||||||| |||||    
T  8897806 ccgggaaggggtcccacca-tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 8897884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 12626027 - 12625902
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttg-ttttc 278  Q
    |||||||||| ||||||||| ||||||||  |||||| || || || |||| |||||||||||| |||||||||||| | |||  |||||| || ||||     
T  12626027 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggagggggtcccacca-tttggtgtattgtatgcagtcttaccctgtttttt 12625930  T
Q  279 tacagaaagggttgtttccaagacttga 306  Q
    |||| ||  ||||||||||| |||||||    
T  12625929 tacacaagaggttgtttccaggacttga 12625902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 20870015 - 20869960
Alignment:
Q  228 ggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||| |||||| ||||    
T  20870015 ggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 20869960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 26954226 - 26954175
Alignment:
Q  227 gggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||    
T  26954226 gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 26954175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 43942417 - 43942366
Alignment:
Q  227 gggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||    
T  43942417 gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttt 43942366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 20284111 - 20284157
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttacc 270  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  20284111 ccgggaaggggtcccaccattattggtgtattgtacgcagccttacc 20284157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 21070739 - 21070785
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttacc 270  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  21070739 ccgggaaggggtcccaccattattggtgtattgtacgcagccttacc 21070785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 22598250 - 22598135
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    ||||||| ||||| ||||| || ||||||||| ||  | ||||||| |||||| |||| ||  ||||||||||| || |||||| | ||||    |||||    
T  22598250 ccgggaaagggtctcaccaatt-ggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaacccgtgacc---tttca 22598155  T
Q  325 gtcatgtgacaacaacttta 344  Q
    ||||||||||||||||||||    
T  22598154 gtcatgtgacaacaacttta 22598135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 343
Target Start/End: Complemental strand, 35106014 - 35105902
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcagtc 327  Q
    ||||| |||||||||||| |||||||||| ||||| ||||||  | | || |||| ||  ||||||||||| ||||||||| | ||||    |||||| |    
T  35106014 ggaagaggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgac---ctttcagcc 35105918  T
Q  328 atgtgacaacaacttt 343  Q
    | ||||||||||||||    
T  35105917 acgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 5689723 - 5689636
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatga 314  Q
    ||||||||||| ||||||||| ||||||||| ||||| ||||||| || ||| |||| ||  || | ||| |||||||||||| |||||    
T  5689723 cgggaaggggttccaccattt-ggtgtattgtacgcagccttaccctgctttttacacaagaggctatttacaagacttgaacccatga 5689636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 19729433 - 19729382
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| || || ||||||| ||||||    
T  19729433 ccgggaaggggtcccacca-tttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 23000261 - 23000312
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| | | ||||||||| ||||||    
T  23000261 ccgggaaggggtcccacca-tttggtgtattgtatggaaccttaccgtgtttt 23000312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 46967 - 46842
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| ||||||||| ||||||||  |||||| || || || |||||||||||||||||||| ||||||||| ||||||||||||| | |||| ||    
T  46967 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcaaccttaccctatttttta 46870  T
Q  281 cagaaagggttgtttccaagacttgaac 308  Q
    || ||  |||||||||||  ||||||||    
T  46869 cacaagaggttgtttccagcacttgaac 46842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 230 - 277
Target Start/End: Complemental strand, 43745 - 43699
Alignment:
Q  230 aaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  43745 aaggggtcccaccattt-ggtgtattgtacgcagccttaccttgtttt 43699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 46710 - 46794
Alignment:
Q  185 gggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttacc 270  Q
    |||||||| | |||||||||||||  |||||| || || |  |||||||||||||||||||||||| ||||| | ||| |||||||    
T  46710 gggcagcctgatgcattaaagctcccgcatacgcagggtct-gggaaggggtcccaccattttggtatattgtatgcatccttacc 46794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 24815 - 24870
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    |||||||||||||||||| |||||||| ||| ||||| ||||||| |||||| ||||    
T  24815 cgggaaggggtcccacca-tttggtgtgttgtacgcagccttaccctgttttttaca 24870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 7879774 - 7879649
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    ||||||||| ||||||||| | ||||||  |||||| || || || |||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||    
T  7879774 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtcc-gggaaggggtcccaccattt-ggtgtattgtacgcagccttaccttgtttttta 7879677  T
Q  281 cagaaagggttgtttccaagacttgaac 308  Q
    || ||  | ||||||||| |||||||||    
T  7879676 cacaagagattgtttccaggacttgaac 7879649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 46354289 - 46354205
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||| |||| ||  ||||||||||| |||||||||    
T  46354289 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaac 46354205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 35787267 - 35787362
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||| ||||||||||| ||||||  |||||| || || || ||||||||||||| |||||| ||||||||| ||||||||||||| ||||||    
T  35787267 taaaagggcaacccggtgcattgaagctcccgcatacgcaaggtcc-gggaaggggtcccgccattt-ggtgtattgtacgcaaccttaccatgtttt 35787362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 308
Target Start/End: Original strand, 2541013 - 2541143
Alignment:
Q  176 taattaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtt 275  Q
    ||||| |||||| | ||||||||| ||||||||  |||||| || || || ||||||||||||||||| |||||||||| | ||||| ||||||| ||||    
T  2541013 taatttaaagggaaacccggtgcactaaagctcccgcatacgcagggacc-gggaaggggtcccacca-tttggtgtatagtacgcagccttaccctgtt 2541110  T
Q  276 ttctacagaaagggttgtttccaagacttgaac 308  Q
    || |||| ||  || |||||||| |||||||||    
T  2541111 ttttacacaagaggctgtttccaggacttgaac 2541143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 27629728 - 27629645
Alignment:
Q  224 cccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||| |||||| |||| ||  || |||||||| |||||||||    
T  27629728 cccgggaaggggtcccaccattt-ggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaac 27629645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 29907552 - 29907469
Alignment:
Q  183 aagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttac 269  Q
    ||||||| ||||||||| ||||||||  |||||||   ||  |||||| ||||||||||||||||||||||||||||||| ||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcataca---gggtccgggatggggtcccaccattttggtgtattgaacgcagccttac 29907469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 47716554 - 47716470
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||| |||| ||  || |||||||| |||||||||    
T  47716554 ccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaac 47716470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 42798762 - 42798680
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||| |||||||||||||| ||||||||| ||||| |||||||||||||| |||| ||  |  ||||||||||||||||||    
T  42798762 ccgggaaagggtcccaccattt-ggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaac 42798680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 17048857 - 17048915
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacag 283  Q
    |||||||||||| ||||||||||||||||||| ||| ||||||||| |||||| |||||    
T  17048857 ccgggaaggggttccaccattttggtgtattgtacgtaaccttaccctgttttttacag 17048915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 308
Target Start/End: Original strand, 33871922 - 33872033
Alignment:
Q  194 ggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgt 293  Q
    |||||| ||||||||| ||||||||| || |  ||||||||||||||||| |||||||||||| ||||| ||||| | |||||| |||| ||  ||||||    
T  33871922 ggtgcactaaagctctcgcatacacagggtct-gggaaggggtcccacca-tttggtgtattgtacgcagccttatcctgtttt-tacacaagaggttgt 33872018  T
Q  294 ttccaagacttgaac 308  Q
    ||||| |||||||||    
T  33872019 ttccaggacttgaac 33872033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 43557567 - 43557450
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttc 323  Q
    |||||| |||||||||||||| ||||||||||| ||||| ||||||  |||||| |||| ||  || |||||||| ||||||||| ||||||    ||||    
T  43557567 ccgggagggggtcccaccattattggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgac---ctttc 43557471  T
Q  324 agtcatgtgacaacaacttta 344  Q
    |||||  ||||||||||||||    
T  43557470 agtcacatgacaacaacttta 43557450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 308
Target Start/End: Original strand, 11617589 - 11617712
Alignment:
Q  183 aagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    ||||||| ||||||||| ||||| ||  |||||| || || || || ||||||||||||||||| ||||||||| |||||  |||||| |||||| ||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccagg-aaggggtcccaccattt-ggtgtattgtacgcagtcttaccctgttttttaca 11617686  T
Q  283 gaaagggttgtttccaagacttgaac 308  Q
     ||  ||||||||||| |||||||||    
T  11617687 caagaggttgtttccaggacttgaac 11617712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 19265907 - 19265793
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| | |||| |||| ||  || ||| |||||||||||||| | ||||    |||||    
T  19265907 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctctttt-tacacaagcggctgtatccaagacttgaacccgtgac---ctttca 19265813  T
Q  325 gtcatgtgacaacaacttta 344  Q
    |||| |||||||||||||||    
T  19265812 gtcacgtgacaacaacttta 19265793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 7645047 - 7644967
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    |||||||||||||| |||||||||||||| |||| | |||||| |||||| |||| ||  || |||||||| |||||||||    
T  7645047 ggaaggggtcccacaattttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaac 7644967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 42805619 - 42805535
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||||| || || ||||||| |||||| |||| ||  || |||||||| |||||||||    
T  42805619 ccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaac 42805535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 48735164 - 48735278
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaa-gacttgaacacatgactgaatttc 323  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||  |||| ||  |||||||||||| ||||||||| | ||||    ||||    
T  48735164 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccgtgttt--tacacaagaggttgtttccaaggacttgaacccgtgac---ctttc 48735257  T
Q  324 agtcatgtgacaacaacttta 344  Q
    |||||  ||||||||||||||    
T  48735258 agtcacatgacaacaacttta 48735278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 21172006 - 21172102
Alignment:
Q  179 ttaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||| ||||||||| || |||||  |||||  || ||  ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  21172006 ttaaaagggcaacccggtgcactagagctcccgcatatgca-gggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 21172102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 42476961 - 42476913
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  42476961 ggaaggggtcccaccattt-ggtgtattgtacgcagccttaccttgtttt 42476913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 344
Target Start/End: Original strand, 14099049 - 14099163
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcag 325  Q
    |||||||||||||||||| |||||||||||| |||||  |||| | |||||| |||| ||| || | |||||| ||||| ||| ||||||    ||||||    
T  14099049 cgggaaggggtcccacca-tttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgac---ctttcag 14099144  T
Q  326 tcatgtgacaacaacttta 344  Q
    |||  ||||||||||||||    
T  14099145 tcacatgacaacaacttta 14099163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 344
Target Start/End: Original strand, 14409066 - 14409180
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttcag 325  Q
    |||||||||||||||||| |||||||||||| |||||  |||| | |||||| |||| ||| || | |||||| ||||| ||| ||||||    ||||||    
T  14409066 cgggaaggggtcccacca-tttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgac---ctttcag 14409161  T
Q  326 tcatgtgacaacaacttta 344  Q
    |||  ||||||||||||||    
T  14409162 tcacatgacaacaacttta 14409180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 306
Target Start/End: Complemental strand, 18747621 - 18747499
Alignment:
Q  183 aagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttg-ttttctac 281  Q
    ||||||||||||||||| ||||||||  |||||| || ||   | ||||||||||||||||  ||||||||||  ||||| ||||||| || |||| |||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgca-gggttcaggaaggggtcccacca-attggtgtattatacgcagccttaccctgcttttttac 18747524  T
Q  282 agaaagggttgtttccaagacttga 306  Q
    | ||| || ||||||||||||||||    
T  18747523 acaaaaggctgtttccaagacttga 18747499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 34626250 - 34626301
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||    
T  34626250 ccgggaagggatcccaccattt-ggtgtattgaacgcagccttaccctgtttt 34626301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 42391142 - 42391193
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  42391142 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 42391193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 8148989 - 8149031
Alignment:
Q  227 gggaaggggtcccaccattttggtgtattgaacgcaaccttacc 270  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  8148989 gggaaggggtcccaccattt-ggtgtattgtacgcaaccttacc 8149031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 28078175 - 28078225
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||||||||||| |||||||||||| | ||||||||||| ||||||    
T  28078175 cgggaaggggtcccacca-tttggtgtattgcatgcaaccttaccctgtttt 28078225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 1408550 - 1408469
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaa 307  Q
    ||||||||||||||||||| |||| ||||||| || || |||||||||||||| |||| ||  || | |||||| ||||||||    
T  1408550 ccgggaaggggtcccacca-tttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggacttgaa 1408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 344
Target Start/End: Original strand, 10693115 - 10693228
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| | |||  |||| ||  || |||||||| ||||||||| | ||||    |||||    
T  10693115 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctcttt--tacacaagaggctgtttccaggacttgaacccgtgac---ctttca 10693208  T
Q  325 gtcatgtgacaacaacttta 344  Q
    ||||  ||||||||||||||    
T  10693209 gtcacatgacaacaacttta 10693228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 308
Target Start/End: Complemental strand, 21566528 - 21566446
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||| ||||||||||||||||| |||||  ||| |  |||||| |||| ||  ||  |||||||||||||||||    
T  21566528 cgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcggtttccaagacttgaac 21566446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 16341372 - 16341315
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctaca 282  Q
    |||||||| || |||||||||||||||||||| ||| | ||||||| |||||| ||||    
T  16341372 ccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttaca 16341315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 351
Target Start/End: Complemental strand, 22065619 - 22065559
Alignment:
Q  288 ggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaactttatcattgc 351  Q
    |||||||||||| |||||||| |||||||   ||||| ||| ||||||||||||||| ||||||    
T  22065619 ggttgtttccaaaacttgaactcatgact---tttcaatcacgtgacaacaactttaccattgc 22065559  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 282
Target Start/End: Original strand, 22698967 - 22699068
Alignment:
Q  182 aaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccacca-ttttggtgtattgaacgcaaccttaccttgttttcta 280  Q
    |||||| | ||||||||| || |||||  ||||||||| || || || || ||||||||||| ||||||||||||| |||||  |||||| |||||| ||    
T  22698967 aaagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgtttttta 22699066  T
Q  281 ca 282  Q
    ||    
T  22699067 ca 22699068  T

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Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 23419719 - 23419798
Alignment:
Q  228 ggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||| ||||||||| |||||  |||||| |||||| |||| ||  || ||||||||  ||||||||    
T  23419719 ggaaggggtcccaccattt-ggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaac 23419798  T

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Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 32758352 - 32758301
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| || || ||||||| ||||||    
T  32758352 ccgggaaggggtcccacca-tttggtgtattgtacacagccttaccctgtttt 32758301  T

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Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 12221913 - 12222074
Alignment:
Q  181 aaaagggcagcccggtgcattaaa-gctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttc 278  Q
    ||||||||| ||||||||| |||| ||||  |||||| || || || ||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||     
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttt 12222011  T
Q  279 tacagaaagggttgtttccaagacttgaacacatgactgaatttcagtcatgtgacaacaacttta 344  Q
    |||| ||  || |||||||||||||||||| | ||||    |||||||||  ||||||||||||||    
T  12222012 tacacaagaggctgtttccaagacttgaacccgtgac---ctttcagtcacatgacaacaacttta 12222074  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 308
Target Start/End: Original strand, 29355854 - 29355981
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttct 279  Q
    ||||||||| ||||||||| ||||||||  |||||| || || || ||||||||||||||||||| ||||||||||| ||||| ||||||| |||||  |    
T  29355854 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc-gggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttctt 29355952  T
Q  280 acagaaagggttgtttccaagacttgaac 308  Q
    ||| ||  || |||||||| |||||||||    
T  29355953 acacaagaggctgtttccaggacttgaac 29355981  T

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Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 2166452 - 2166536
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| | ||| || |||| ||  ||||||||||| |||||||||    
T  2166452 ccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaac 2166536  T

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Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 2178085 - 2178169
Alignment:
Q  225 ccgggaaggggtcccaccatt-ttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| | ||| || |||| ||  ||||||||||| |||||||||    
T  2178085 ccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaac 2178169  T

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Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 1354752 - 1354850
Alignment:
Q  177 aattaaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttt 276  Q
    ||||||||||||| ||||||||| || |||||  |||||  || ||  ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||    
T  1354752 aattaaaagggcaacccggtgcactagagctcccgcatatgca-gggtccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttt 1354849  T

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Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 7947413 - 7947496
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||| || ||| |||| |   ||||||||||| || ||||||    
T  7947413 ccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgtttccaggagttgaac 7947496  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 344
Target Start/End: Complemental strand, 1347055 - 1346942
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaacacatgactgaatttca 324  Q
    ||||||||||||||||||| |||||||||||| ||||| ||||||| |||||  |||| ||  || |||||||| ||||||||| | ||||    |||||    
T  1347055 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgttt--tacacaagtggctgtttccaggacttgaacccgtgac---ctttca 1346962  T
Q  325 gtcatgtgacaacaacttta 344  Q
    ||||  ||||||||||||||    
T  1346961 gtcacatgacaacaacttta 1346942  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 6808531 - 6808468
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccatt 245  Q
    ||||||||| ||||||||| ||||||||  ||||||||| || || |||||||||||||||||||    
T  6808531 aaaagggcaacccggtgcactaaagctcccgcatacacagggtcc-gggaaggggtcccaccatt 6808468  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 256
Target Start/End: Complemental strand, 11849146 - 11849116
Alignment:
Q  226 cgggaaggggtcccaccattttggtgtattg 256  Q
    |||||||||||||||||||||||||||||||    
T  11849146 cgggaaggggtcccaccattttggtgtattg 11849116  T

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Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 24734737 - 24734684
Alignment:
Q  225 ccgggaaggggtcccaccattttggt-gtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||||||||||| |||| || |||||| ||||||||||||| ||||||    
T  24734737 ccgggaaggggtcccaccttttttgttgtattgtacgcaaccttaccctgtttt 24734684  T

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Target: scaffold0254 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 4253 - 4168
Alignment:
Q  225 ccgggaaggggtcccaccattt--tggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||| ||  |||||||||| ||||||||||| | ||| || |||| ||  ||||||||||| |||||||||    
T  4253 ccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaac 4168  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 277
Target Start/End: Original strand, 48632 - 48727
Alignment:
Q  180 taaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    |||||||||| ||||||||| || |||||  |||||  || || || ||||||||||||||||| |||||||||||| ||||| ||||||| ||||||    
T  48632 taaaagggcaacccggtgcactagagctcccgcatatgcagggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagccttaccctgtttt 48727  T

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Target: scaffold0258 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 277
Target Start/End: Original strand, 13023 - 13117
Alignment:
Q  181 aaaagggcagcccggtgcattaaagctctagcatacacatggccccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||| ||||||||| |||||| |  |||||| || || |  |||||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  13023 aaaagggcaacccggtgcactaaagcccccgcatacgcagggtct-gggaaggggtcccaccattc-ggtgtattgtacgcagccttaccttgtttt 13117  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 10903 - 10834
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgttttctacagaaagggttgttt 295  Q
    ||||||||||||||||||| |||||||||||| ||||| || |||| |||||| |||| ||  ||||||||    
T  10903 ccgggaaggggtcccacca-tttggtgtattggacgcagccctaccctgttttttacacaagaggttgttt 10834  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 59070 - 58988
Alignment:
Q  227 gggaaggggtcccaccatttt-ggtgtattgaacgcaaccttaccttgttttctacagaaagggttgtttccaagacttgaac 308  Q
    ||||||||||||||||||||| ||||||||| |||||  |||||| |||||| || | ||  || |||||||| |||||||||    
T  59070 gggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccaggacttgaac 58988  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 24175 - 24219
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttacc 270  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||    
T  24175 ccgggaaggggtcccacca-tttggtgtattgtacgcagccttacc 24219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 30670 - 30619
Alignment:
Q  225 ccgggaaggggtcccaccattttggtgtattgaacgcaaccttaccttgtttt 277  Q
    ||||||||||||||||||| |||||||||||| ||||| || |||| ||||||    
T  30670 ccgggaaggggtcccacca-tttggtgtattgtacgcagccctaccctgtttt 30619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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