View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0098_low_7 (Length: 274)

Name: NF0098_low_7
Description: NF0098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0098_low_7
NF0098_low_7
[»] chr7 (65 HSPs)
chr7 (39-222)||(20991517-20991700)
chr7 (39-221)||(16436749-16436931)
chr7 (39-222)||(4458714-4458898)
chr7 (43-219)||(11521413-11521590)
chr7 (52-222)||(42636235-42636405)
chr7 (39-222)||(11998854-11999038)
chr7 (42-222)||(10279793-10279972)
chr7 (43-222)||(645112-645292)
chr7 (39-222)||(11588439-11588623)
chr7 (39-222)||(16207881-16208065)
chr7 (45-222)||(48797619-48797795)
chr7 (52-186)||(10658371-10658505)
chr7 (52-222)||(14926635-14926805)
chr7 (52-222)||(15350101-15350271)
chr7 (39-222)||(29546138-29546314)
chr7 (54-219)||(7586533-7586698)
chr7 (43-222)||(14165144-14165324)
chr7 (39-222)||(13455112-13455295)
chr7 (45-222)||(3290684-3290861)
chr7 (51-222)||(9564244-9564413)
chr7 (39-214)||(20925110-20925281)
chr7 (51-222)||(24902093-24902263)
chr7 (45-221)||(11560507-11560682)
chr7 (44-222)||(26132916-26133093)
chr7 (55-222)||(42782747-42782914)
chr7 (51-222)||(9566893-9567062)
chr7 (45-222)||(30226066-30226244)
chr7 (45-222)||(7620062-7620238)
chr7 (51-222)||(23956864-23957035)
chr7 (81-222)||(4794587-4794730)
chr7 (81-221)||(15506284-15506425)
chr7 (63-222)||(9894067-9894226)
chr7 (51-222)||(14984659-14984829)
chr7 (51-222)||(15414270-15414440)
chr7 (45-218)||(11628621-11628794)
chr7 (55-222)||(10251431-10251598)
chr7 (54-222)||(14975423-14975590)
chr7 (54-222)||(15404899-15405066)
chr7 (55-222)||(10038728-10038902)
chr7 (81-214)||(15436065-15436199)
chr7 (55-220)||(23579956-23580121)
chr7 (55-222)||(23082775-23082941)
chr7 (39-222)||(12325800-12325972)
chr7 (63-222)||(23296499-23296661)
chr7 (55-222)||(7508426-7508592)
chr7 (91-222)||(24813952-24814083)
chr7 (88-222)||(15708195-15708329)
chr7 (52-166)||(21260503-21260617)
chr7 (55-222)||(14687358-14687525)
chr7 (53-222)||(23174881-23175050)
chr7 (54-132)||(23057196-23057274)
chr7 (62-222)||(10309491-10309650)
chr7 (55-222)||(19353122-19353288)
chr7 (54-222)||(11406950-11407118)
chr7 (54-222)||(20588708-20588875)
chr7 (54-222)||(20596825-20596993)
chr7 (53-222)||(26195458-26195626)
chr7 (53-129)||(31269148-31269224)
chr7 (55-139)||(6045312-6045395)
chr7 (182-222)||(24049568-24049608)
chr7 (54-120)||(2076496-2076561)
chr7 (54-120)||(2082915-2082980)
chr7 (181-222)||(4547811-4547852)
chr7 (45-118)||(4547851-4547923)
chr7 (182-222)||(10660981-10661021)
[»] chr3 (46 HSPs)
chr3 (39-222)||(295435-295618)
chr3 (39-222)||(17702381-17702565)
chr3 (39-222)||(13790654-13790838)
chr3 (39-222)||(28051111-28051294)
chr3 (52-222)||(6580867-6581037)
chr3 (44-222)||(18064206-18064384)
chr3 (39-222)||(15635873-15636057)
chr3 (44-222)||(18034896-18035074)
chr3 (39-222)||(24195499-24195682)
chr3 (39-222)||(44452455-44452639)
chr3 (41-219)||(18547625-18547804)
chr3 (52-222)||(17042754-17042924)
chr3 (39-222)||(23954557-23954741)
chr3 (43-213)||(19633866-19634035)
chr3 (45-222)||(9036689-9036865)
chr3 (45-222)||(9031382-9031558)
chr3 (39-197)||(13524707-13524864)
chr3 (45-222)||(7495929-7496104)
chr3 (51-222)||(15686159-15686329)
chr3 (51-222)||(13913779-13913948)
chr3 (45-222)||(7479138-7479313)
chr3 (76-213)||(8224850-8224989)
chr3 (84-222)||(8749059-8749197)
chr3 (92-222)||(18476957-18477087)
chr3 (45-217)||(12054454-12054624)
chr3 (51-222)||(13917831-13918000)
chr3 (71-222)||(21718926-21719076)
chr3 (50-222)||(286892-287065)
chr3 (39-156)||(19531950-19532067)
chr3 (63-222)||(31649690-31649847)
chr3 (43-214)||(1919251-1919415)
chr3 (39-222)||(20748164-20748346)
chr3 (52-223)||(11656010-11656181)
chr3 (54-222)||(21094702-21094866)
chr3 (63-222)||(3552214-3552373)
chr3 (54-219)||(980370-980533)
chr3 (51-222)||(11558324-11558489)
chr3 (51-222)||(11567593-11567758)
chr3 (122-222)||(21253993-21254094)
chr3 (53-130)||(14406722-14406799)
chr3 (150-222)||(18483371-18483444)
chr3 (171-222)||(215346-215397)
chr3 (53-222)||(3445006-3445174)
chr3 (51-85)||(15686417-15686451)
chr3 (175-222)||(13100723-13100770)
chr3 (53-116)||(10082380-10082443)
[»] chr6 (52 HSPs)
chr6 (39-222)||(20470204-20470387)
chr6 (39-222)||(17855169-17855353)
chr6 (39-214)||(12039691-12039866)
chr6 (39-222)||(13195298-13195482)
chr6 (43-222)||(33665772-33665952)
chr6 (39-222)||(15897675-15897858)
chr6 (39-222)||(25805428-25805611)
chr6 (42-222)||(9281709-9281890)
chr6 (42-222)||(17864426-17864606)
chr6 (43-218)||(20989770-20989945)
chr6 (39-221)||(23882696-23882878)
chr6 (39-221)||(17234566-17234749)
chr6 (52-219)||(24501812-24501979)
chr6 (39-222)||(8465673-8465852)
chr6 (39-222)||(14258885-14259069)
chr6 (52-222)||(26965571-26965742)
chr6 (39-222)||(29254917-29255099)
chr6 (39-217)||(21706355-21706534)
chr6 (39-218)||(17527889-17528069)
chr6 (52-222)||(16309359-16309527)
chr6 (51-222)||(12444723-12444891)
chr6 (39-222)||(20558277-20558460)
chr6 (72-222)||(21723409-21723560)
chr6 (45-222)||(16137583-16137759)
chr6 (39-222)||(34657152-34657335)
chr6 (44-222)||(15038328-15038505)
chr6 (92-222)||(25964722-25964853)
chr6 (92-222)||(25969369-25969500)
chr6 (92-222)||(25973809-25973940)
chr6 (45-211)||(9384595-9384761)
chr6 (45-222)||(15003163-15003340)
chr6 (51-222)||(28623516-28623686)
chr6 (55-222)||(30424926-30425093)
chr6 (45-215)||(15007344-15007513)
chr6 (45-222)||(19215935-19216111)
chr6 (45-222)||(20003118-20003295)
chr6 (55-221)||(11960472-11960640)
chr6 (92-219)||(3567426-3567553)
chr6 (101-222)||(19171452-19171574)
chr6 (61-222)||(20764995-20765156)
chr6 (50-147)||(25782797-25782894)
chr6 (90-222)||(21323275-21323407)
chr6 (85-206)||(32449271-32449392)
chr6 (39-94)||(25948503-25948558)
chr6 (55-222)||(18152707-18152874)
chr6 (96-189)||(13870399-13870493)
chr6 (39-97)||(17869944-17870002)
chr6 (39-97)||(17879696-17879754)
chr6 (119-219)||(19894625-19894725)
chr6 (39-87)||(12385261-12385309)
chr6 (172-222)||(19100008-19100057)
chr6 (170-210)||(24561560-24561600)
[»] chr1 (28 HSPs)
chr1 (39-222)||(4246010-4246194)
chr1 (39-222)||(11667863-11668046)
chr1 (39-222)||(26972399-26972584)
chr1 (41-222)||(17851373-17851554)
chr1 (50-222)||(1973299-1973471)
chr1 (39-222)||(20841265-20841448)
chr1 (45-222)||(23477935-23478112)
chr1 (52-222)||(12753049-12753219)
chr1 (39-219)||(13165372-13165550)
chr1 (51-222)||(14745783-14745954)
chr1 (55-222)||(17379623-17379790)
chr1 (52-222)||(17038236-17038404)
chr1 (55-222)||(17355831-17355998)
chr1 (50-222)||(33062372-33062544)
chr1 (45-222)||(40313224-40313400)
chr1 (81-222)||(17012019-17012161)
chr1 (81-222)||(45599330-45599471)
chr1 (55-222)||(51472093-51472260)
chr1 (108-222)||(47941340-47941454)
chr1 (51-222)||(15804112-15804282)
chr1 (54-222)||(18390105-18390273)
chr1 (39-120)||(20859645-20859726)
chr1 (55-222)||(8281911-8282078)
chr1 (45-222)||(52436820-52436997)
chr1 (52-222)||(10340158-10340327)
chr1 (45-133)||(41330891-41330979)
chr1 (54-97)||(18379856-18379899)
chr1 (54-120)||(8902055-8902121)
[»] chr8 (34 HSPs)
chr8 (39-222)||(24091932-24092115)
chr8 (39-222)||(11221273-11221451)
chr8 (50-222)||(33977044-33977216)
chr8 (39-222)||(23541411-23541595)
chr8 (52-222)||(9996487-9996657)
chr8 (80-222)||(13660373-13660514)
chr8 (80-222)||(13719016-13719157)
chr8 (74-222)||(22476240-22476389)
chr8 (52-221)||(20254877-20255054)
chr8 (81-222)||(8726861-8727002)
chr8 (50-220)||(25240391-25240562)
chr8 (39-222)||(22485118-22485292)
chr8 (51-222)||(33466161-33466331)
chr8 (45-222)||(17880740-17880917)
chr8 (81-222)||(39080982-39081123)
chr8 (55-217)||(12814598-12814760)
chr8 (51-222)||(17279876-17280046)
chr8 (81-222)||(37155526-37155668)
chr8 (106-222)||(27925447-27925563)
chr8 (92-210)||(22874206-22874324)
chr8 (125-222)||(45136176-45136273)
chr8 (67-205)||(24384564-24384702)
chr8 (52-222)||(1683966-1684133)
chr8 (90-219)||(24850436-24850565)
chr8 (39-129)||(45133639-45133729)
chr8 (88-222)||(23864468-23864602)
chr8 (39-165)||(33961736-33961862)
chr8 (53-222)||(1562368-1562537)
chr8 (45-222)||(23249716-23249893)
chr8 (54-131)||(12240228-12240305)
chr8 (53-132)||(12376962-12377039)
chr8 (55-134)||(18753875-18753954)
chr8 (39-78)||(22472759-22472798)
chr8 (187-222)||(33961864-33961899)
[»] scaffold0102 (1 HSPs)
scaffold0102 (43-222)||(36984-37164)
[»] chr2 (27 HSPs)
chr2 (39-222)||(23758600-23758784)
chr2 (39-222)||(24790159-24790343)
chr2 (39-222)||(12910464-12910648)
chr2 (39-222)||(36398795-36398979)
chr2 (50-222)||(19466524-19466696)
chr2 (39-222)||(22610867-22611051)
chr2 (88-222)||(26860297-26860432)
chr2 (45-222)||(21530366-21530542)
chr2 (45-222)||(21250199-21250376)
chr2 (83-222)||(29566031-29566169)
chr2 (50-222)||(18765662-18765834)
chr2 (53-220)||(24317813-24317981)
chr2 (55-219)||(31587467-31587630)
chr2 (53-222)||(24317190-24317361)
chr2 (50-222)||(13314967-13315139)
chr2 (55-222)||(27111071-27111237)
chr2 (53-222)||(20649558-20649727)
chr2 (70-219)||(25347199-25347348)
chr2 (53-222)||(20475277-20475446)
chr2 (80-222)||(20476578-20476720)
chr2 (54-222)||(12952462-12952630)
chr2 (70-222)||(19198280-19198431)
chr2 (110-222)||(27107556-27107668)
chr2 (82-168)||(15328326-15328412)
chr2 (61-166)||(23801865-23801969)
chr2 (64-157)||(24283596-24283688)
chr2 (38-148)||(22582387-22582497)
[»] chr5 (32 HSPs)
chr5 (39-222)||(30605692-30605875)
chr5 (43-222)||(22404762-22404942)
chr5 (43-222)||(26329215-26329394)
chr5 (50-222)||(26036796-26036968)
chr5 (39-222)||(23623852-23624035)
chr5 (39-222)||(24189837-24190021)
chr5 (45-222)||(23420562-23420740)
chr5 (39-222)||(13338567-13338749)
chr5 (44-222)||(13734974-13735153)
chr5 (39-222)||(18221085-18221268)
chr5 (55-222)||(13941998-13942166)
chr5 (44-222)||(7897916-7898093)
chr5 (50-222)||(20714737-20714910)
chr5 (81-222)||(20740938-20741079)
chr5 (45-222)||(17920785-17920961)
chr5 (39-196)||(25105447-25105605)
chr5 (39-196)||(25164540-25164698)
chr5 (51-222)||(20845795-20845966)
chr5 (51-222)||(26183235-26183406)
chr5 (44-222)||(20498154-20498332)
chr5 (97-218)||(22246356-22246478)
chr5 (106-219)||(22252045-22252159)
chr5 (51-181)||(22130877-22131005)
chr5 (92-222)||(22184599-22184729)
chr5 (51-222)||(17661412-17661583)
chr5 (55-222)||(24117586-24117753)
chr5 (55-222)||(22979736-22979904)
chr5 (95-219)||(20127026-20127150)
chr5 (39-134)||(9422557-9422652)
chr5 (90-222)||(9522561-9522692)
chr5 (90-218)||(11756210-11756338)
chr5 (54-120)||(11204712-11204777)
[»] chr4 (37 HSPs)
chr4 (39-219)||(15700315-15700496)
chr4 (39-222)||(25116798-25116984)
chr4 (39-222)||(10190861-10191045)
chr4 (50-222)||(13399305-13399477)
chr4 (39-222)||(10724234-10724417)
chr4 (39-222)||(10938003-10938186)
chr4 (39-221)||(23400196-23400373)
chr4 (43-214)||(28019283-28019455)
chr4 (52-222)||(9068933-9069103)
chr4 (39-219)||(16383865-16384046)
chr4 (39-215)||(33898996-33899173)
chr4 (44-222)||(15162489-15162667)
chr4 (52-222)||(33745951-33746121)
chr4 (39-222)||(18618117-18618301)
chr4 (39-222)||(21478083-21478266)
chr4 (58-222)||(19659432-19659597)
chr4 (54-222)||(32861637-32861806)
chr4 (44-222)||(25354637-25354814)
chr4 (53-222)||(50907840-50908009)
chr4 (45-222)||(23541225-23541401)
chr4 (45-210)||(46741763-46741927)
chr4 (92-222)||(10722011-10722141)
chr4 (92-222)||(10935780-10935910)
chr4 (55-222)||(10198252-10198418)
chr4 (51-222)||(24143122-24143292)
chr4 (44-222)||(22554950-22555129)
chr4 (50-219)||(11905081-11905248)
chr4 (81-219)||(11325149-11325288)
chr4 (45-222)||(19894805-19894981)
chr4 (39-222)||(8163757-8163943)
chr4 (95-222)||(19183682-19183809)
chr4 (54-222)||(2679839-2680003)
chr4 (51-221)||(41785421-41785590)
chr4 (55-222)||(16655340-16655507)
chr4 (54-131)||(33737973-33738050)
chr4 (54-100)||(26244988-26245034)
chr4 (53-120)||(13268835-13268902)
[»] scaffold0226 (3 HSPs)
scaffold0226 (39-222)||(7541-7724)
scaffold0226 (39-222)||(18128-18311)
scaffold0226 (39-222)||(27522-27705)
[»] scaffold0003 (1 HSPs)
scaffold0003 (39-221)||(26379-26561)
[»] scaffold0006 (1 HSPs)
scaffold0006 (39-222)||(87710-87894)
[»] scaffold0103 (1 HSPs)
scaffold0103 (43-222)||(25674-25854)
[»] scaffold0259 (1 HSPs)
scaffold0259 (43-222)||(17279-17458)
[»] scaffold0008 (1 HSPs)
scaffold0008 (39-222)||(40310-40493)
[»] scaffold0037 (1 HSPs)
scaffold0037 (43-222)||(110257-110438)
[»] scaffold0185 (1 HSPs)
scaffold0185 (39-222)||(2359-2543)
[»] scaffold0059 (2 HSPs)
scaffold0059 (45-222)||(61474-61651)
scaffold0059 (43-169)||(50146-50272)
[»] scaffold0190 (1 HSPs)
scaffold0190 (39-219)||(16628-16809)
[»] scaffold0064 (2 HSPs)
scaffold0064 (45-222)||(52928-53102)
scaffold0064 (160-222)||(45867-45929)
[»] scaffold0088 (1 HSPs)
scaffold0088 (70-222)||(36598-36751)
[»] scaffold0032 (1 HSPs)
scaffold0032 (50-222)||(103092-103263)
[»] scaffold0338 (1 HSPs)
scaffold0338 (39-222)||(16214-16397)
[»] scaffold0143 (1 HSPs)
scaffold0143 (51-222)||(36285-36455)
[»] scaffold0333 (1 HSPs)
scaffold0333 (39-169)||(5621-5750)
[»] scaffold0035 (1 HSPs)
scaffold0035 (55-222)||(37357-37525)
[»] scaffold0022 (1 HSPs)
scaffold0022 (52-222)||(3111-3278)
[»] scaffold0328 (1 HSPs)
scaffold0328 (50-222)||(16973-17145)
[»] scaffold0015 (1 HSPs)
scaffold0015 (55-222)||(202386-202552)
[»] scaffold0505 (1 HSPs)
scaffold0505 (55-222)||(10037-10204)
[»] scaffold0520 (1 HSPs)
scaffold0520 (55-222)||(5409-5576)
[»] scaffold0423 (1 HSPs)
scaffold0423 (53-222)||(13596-13765)
[»] scaffold0480 (1 HSPs)
scaffold0480 (171-222)||(11295-11346)
[»] scaffold0020 (1 HSPs)
scaffold0020 (180-222)||(12511-12553)
[»] scaffold0072 (1 HSPs)
scaffold0072 (54-120)||(18540-18605)


Alignment Details
Target: chr7 (Bit Score: 156; Significance: 6e-83; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 20991517 - 20991700
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| | |    
T  20991517 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttatttt 20991616  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  20991617 atagctctcagcaaactcctcgtttacactaaagacctaggacctatccagatagacttcaacctaggaactcctagatctgag 20991700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 39 - 221
Target Start/End: Original strand, 16436749 - 16436931
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| |||    
T  16436749 aaagaacacagtgagtttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattct 16436848  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 221  Q
     ||||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  16436849 gtagctctcaacaaactcctcatttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctga 16436931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 4458714 - 4458898
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| ||     
T  4458714 aaagaacacagtgaatttgttgaccgagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattca 4458813  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4458814 aaagctctcagcaaactcctcgtttacactttatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 4458898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 43 - 219
Target Start/End: Complemental strand, 11521590 - 11521413
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||| || ||||||||||||| || ||||    
T  11521590 aacacaatgagtttgttgacccagtttggtgacaaacacacctactctaggggctaccaagccaggaaggaaatctactagtgtagtccttattcaatag 11521491  T
Q  143 ctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11521490 ctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatatactccaacctaggaactcctagatct 11521413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 42636235 - 42636405
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| ||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  42636235 agtttgttaaccaagttcggtgacaaacatacctactctggaggctaccaagcaaggaaggaaatccactagtgtagtccttattctatagctctcagca 42636334  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||| |||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  42636335 aactccttgtttacactaaagacctaggacctacccatattgatttcaacctaggaactcctagatctgag 42636405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 11998854 - 11999038
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactc 137  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| |||||| ||||||||||||||| ||||||||||||| ||    
T  11998854 aaagaacacaatgagtttgttgacccagttcgatgacaaacacacctacgtccgggggct-ccaagccaggaaggaaatccactagtgtagtccttattc 11998952  T
Q  138 tatagctctcagcaaactcctcgtttacactaaa-gacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     |||||||||| |||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11998953 aatagctctcaacaaactcctcatttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 11999038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 42 - 222
Target Start/End: Original strand, 10279793 - 10279972
Alignment:
Q  42 gaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctata 141  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  10279793 gaacacaatgagtttgttgacctagttcggcgacaaacacacctactctgggg-ctaccaagccaggaaggaaattcaccagtgtagtccttattctata 10279891  T
Q  142 gctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||| ||||||| |||||||||||| |||||| || |||||||||||||||| ||||||||||    
T  10279892 gctctcagcaaactcctcgtttgcactaaatacctaggacctatccgtattgatttcaacctaggaactcgtagatctgag 10279972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 43 - 222
Target Start/End: Original strand, 645112 - 645292
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||| || ||||    
T  645112 aacacaatgaatttgttaacccagttcagtgacaaacacacctactatgggggctacgaagccaggaaggaaatccaccagtgtagtccttattcaatag 645211  T
Q  143 ctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||| ||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  645212 ctctcagcaaacttctcgtttacactacatgacctaggacctccccgtatagatttcaacctaggaactcctagatctgag 645292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 11588439 - 11588623
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||| ||     
T  11588439 aaagaacacagtgagtttgttgacccagctcggtgacaaacacacctactctagcggctaccaagccaggaaggaaatccactagtgtagtccttattca 11588538  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||   |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11588539 atagctctctaaaaactcctcgtttacactatttgacctaggacctacccgtatagacttcaacctaggaactcctatatctgag 11588623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 16208065 - 16207881
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||     
T  16208065 aaagaagacaatgagtttgttgacccatttcggcgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattca 16207966  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | ||||||||||||||||||||||||||| | | ||||||| |||||||||||| || |||||||||||||||| ||||||||||    
T  16207965 aaagctctcagcaaactcctcgtttacactttatgacctagcacctacccgtattgatttcaacctaggaactcatagatctgag 16207881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 48797795 - 48797619
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||| ||| |||   |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||    
T  48797795 cacagtgagtttgttaacccagttcagtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 48797697  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  48797696 ctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 48797619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 10658371 - 10658505
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  10658371 agtttgttaacccagttccgtgacaaacacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagca 10658470  T
Q  152 aactcctcgtttacactaaagacctaggacctacc 186  Q
    |||||||||||||||||||||||||||||||||||    
T  10658471 aactcctcgtttacactaaagacctaggacctacc 10658505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 14926635 - 14926805
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||||| | |||||||||| || ||||||||||||| || |||||||||||||    
T  14926635 agtttgttaacccagtttggtgacagacacacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagca 14926734  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||| |||||||||||||||||||||||| || |||||||||| |||| |||||| ||||    
T  14926735 aactcctcgtttacagtaaagacctaggacctacccgtattgatttcaacctagaaacttctagatatgag 14926805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 15350101 - 15350271
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||||| | |||||||||| || ||||||||||||| || |||||||||||||    
T  15350101 agtttgttaacccagtttggtgacagacacacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagca 15350200  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||| |||||||||||||||||||||||| || |||||||||| |||| |||||| ||||    
T  15350201 aactcctcgtttacagtaaagacctaggacctacccgtattgatttcaacctagaaacttctagatatgag 15350271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 29546314 - 29546138
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||||||||| ||| ||       ||||||||||| ||||||||||||| ||||||||||||||| | ||||||||||| |||    
T  29546314 aaagaacacagtgagtttgttgacccaattcagt-------acacctactctcggggctaccaagccaggaaggaaatccactactgtagtccttattct 29546222  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  29546221 ataactctcagcaaacttctcgtttacactaaagacctaggacctacccgtatagactttagcctaggaactcctagatctgag 29546138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 7586698 - 7586533
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| |||| |  ||||||||||    
T  7586698 tttgttgacccagttcggtgacaaacatacctactctgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattctaaacttctcagcaaa 7586600  T
Q  154 ctcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
     ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  7586599 atcctcgtttacaacttaagacctaggacctacccgtctagacttcaacctagaaactcctagatct 7586533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 43 - 222
Target Start/End: Original strand, 14165144 - 14165324
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacc-tactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctata 141  Q
    ||||||||||||||||||| |||||||||||||||||||||| |  ||| ||||||||  ||| ||||||||||||||| ||||||||||||| || |||    
T  14165144 aacacaatgagtttgttgatccagttcggtgacaaacacacctttgtct-ggggctacatagccaggaaggaaatccactagtgtagtccttattcaata 14165242  T
Q  142 gctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||| |||||||||||||||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||||    
T  14165243 gctctcaacaaactcctcgtttacactatatgatctagaacctacccgtatagacttcaacctaggaactcctagatctgag 14165324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 13455295 - 13455112
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||| ||| ||||||||| |||   |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||     
T  13455295 aaagaacacaatgagtttgttaacctagttcggtg-caacgtcacctactctgggggctaccaagcaaggaaggaaatccactagtgtagtccttattca 13455197  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | ||||||  ||||||||||||||||||| | | ||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  13455196 aaagctcttggcaaactcctcgtttacactttatgacttaggacctacccgtctagacttcaacctaggaactcctagatctgag 13455112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 3290861 - 3290684
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| |||||||| |||| |||   |||| ||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||    
T  3290861 cacagtgagtttgttaacccagtttggtg-caacgtcaccaactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 3290763  T
Q  145 ctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  3290762 ctcagcaaactcctcgttttcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 3290684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 9564244 - 9564413
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||||||| |||   ||||||||||||||||||| |||| |||| |||||||||  ||||||||||||| ||| |||||||||||    
T  9564244 gagtttgttaacccagttcggtg-caacgtcacctactctgggggctacaaagccagga-ggaaatccaatagtgtagtccttattctctagctctcagc 9564341  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||||||||||||||||||    
T  9564342 aaactcctcgtttacacaaaagacctaggacctacccgccttgacttcaacctaggaactcctagatctgag 9564413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 39 - 214
Target Start/End: Complemental strand, 20925281 - 20925110
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| || | ||||    || | ||||||||||||| ||| | ||||||| |||    
T  20925281 aaagaacacaatgagtttgttgacccagttcggtgataaacacacctactatgagagcta----gccaagaaggaaatccactagtttcgtccttattct 20925186  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactccta 214  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||    
T  20925185 atagctctcaacaaactcctcgtttacactaaagacctaagacctacctgtctagacttcaacttaggaactccta 20925110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 24902093 - 24902263
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||||||||||||| |||||||||||||||| | | ||||||||||||| ||||||||||||||| ||||||||||||| | || || ||||||     
T  24902093 gagtttgttgacccagttcagtgacaaacacacctattataggggctaccaagccaggaaggaaatccactagtgtagtccttattataaagttctcagt 24902192  T
Q  151 aaactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  || ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24902193 aaa--ccacgtttacaacttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctgag 24902263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 221
Target Start/End: Complemental strand, 11560682 - 11560507
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||||||| ||    |||||||||||||||||||||||||||||||||||||| | | |||||| |||| || ||||||    
T  11560682 cacagtgagtttgttaacccagttcggtg-cactgtcacctactctgggggctaccaagctaggaaggaaatccgctattgtagtgcttattcaatagct 11560584  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 221  Q
    ||||| ||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||||    
T  11560583 ctcagtaaactcctcatttacactaaagacctacaacctacccgtattgacttcaacctaggaactcctggatctga 11560507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 26133093 - 26132916
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||  |     
T  26133093 acacaatgagtttgttaacccagttcggtgacaaagacacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattctaatgt 26132994  T
Q  144 tctcagcaaactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||  || | ||||| ||  |||||||| ||||||||||||| || |||||||||||||||||||||||||||    
T  26132993 tctcagcaaa--ccacatttacaacacaagacctaagacctacccgtattgatttcaacctaggaactcctagatctgag 26132916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 42782747 - 42782914
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||||||||||||| |||   |||||||||||||||||||||||| |||||| |||||||| ||||||||||||| || ||||||||||||||||    
T  42782747 ttgttaacccagttcggtg-caatgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaac 42782845  T
Q  155 tcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||| || || | |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  42782846 tcctcgtttgcaatatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 42782914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 9566893 - 9567062
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||||||| |||    |||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||    
T  9566893 gagtttgttaacccagttcggtg-caacgttacctactcagggggctaccaagccagga-ggaaatccacaagtgtagtccttattctctagctctcagc 9566990  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||| ||||||||||||||||||||||||||| | | || |||||||||||||||| ||||||||||    
T  9566991 aaactcctcatttacactaaagacctaggacctacccatcttgagttcaacctaggaactcatagatctgag 9567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 30226066 - 30226244
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    ||||| ||| ||||| ||||||||||||| |||   ||||||| ||||||||||||||||  ||||||||||||||| ||||||||||||| || |||||    
T  30226066 cacaaagagattgttaacccagttcggtg-caacgtcacctacatctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagc 30226164  T
Q  144 tctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  30226165 tctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 30226244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 7620062 - 7620238
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||||||| |||   |||||||| ||| ||||||||||  ||||||||||||||| ||||||||||||| || ||||||    
T  7620062 cacagtgagtttgttaacccagttcggtg-caacgtcacctactttggaggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 7620160  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||| ||||||||| |||||| |||||||||| ||||||||   |||||||||||||||||||||||||||||    
T  7620161 ctcagcaaaatcctcgtttgcactaatgacctaggacttacccgtactaacttcaacctaggaactcctagatctgag 7620238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 23956864 - 23957035
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||||||| |||||||||||||||||| ||||| | | ||||||||||| |||||| |||||||| ||||||||||||| |||| || |||||||    
T  23956864 gagtttgttgacctagttcggtgacaaacacatctactttagaggctaccaagccaggaagaaaatccactagtgtagtccttattctaaagttctcagc 23956963  T
Q  151 aaactcctcgtttaca--ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  || ||||||||   | |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23956964 aaa--ccacgtttacaactttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctgag 23957035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 4794730 - 4794587
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctagga 180  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||| |||||||| | ||||||||||||||||||||||||||||||    
T  4794730 cacctactctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctctagctctcggaaaactcctcgtttacactaaagacctagga 4794632  T
Q  181 cctacccgtatagacttcaacct---aggaactcctagatctgag 222  Q
    ||||||||| | |||||||||||   |||||||||||||||||||    
T  4794631 cctacccgtcttgacttcaacctaggaggaactcctagatctgag 4794587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 15506284 - 15506425
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttaca-ctaaagacctagg 179  Q
    |||||||||| ||||||||||||| || | |||||||||| ||||||||||||| || | ||||||||||||||||||||||||||  | | ||||||||    
T  15506284 cacctactctaggggctaccaagccagaatggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacattttatgacctagg 15506383  T
Q  180 acctacccgtatagacttcaacctaggaactcctagatctga 221  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15506384 acctacccgtatagacttcaacctaggaactcctagatctga 15506425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 63 - 222
Target Start/End: Complemental strand, 9894226 - 9894067
Alignment:
Q  63 ccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtt 162  Q
    |||||| ||||||||||||||||||||||||| ||||||||  || |||||||||||| ||||||||||||| |||| || |||||||||| |||  |||    
T  9894226 ccagtttggtgacaaacacacctactctggggactaccaagtcagtaaggaaatccactagtgtagtccttattcta-agttctcagcaaattccaagtt 9894128  T
Q  163 tac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  9894127 tacaacttaagacctaggacatacccgtattgacttcaacctaggaactcctagatctgag 9894067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 14984659 - 14984829
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||||||| |||   |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| || ||| |||||| |    
T  14984659 gagtttgttaacccagttcggtg-caacgtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaac 14984757  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||  |||| |||||| ||||||| |||||||||||  |||||||||||||||| |||||||||||||    
T  14984758 aaactccctgtttgcactaatgacctagaacctacccgtactgacttcaacctaggaattcctagatctgag 14984829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 15414270 - 15414440
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||||||| |||   |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| || ||| |||||| |    
T  15414270 gagtttgttaacccagttcggtg-caacgtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaac 15414368  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||  |||| |||||| ||||||| |||||||||||  |||||||||||||||| |||||||||||||    
T  15414369 aaactccctgtttgcactaatgacctagaacctacccgtactgacttcaacctaggaattcctagatctgag 15414440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 218
Target Start/End: Original strand, 11628621 - 11628794
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||||||| |||   |||||||| |||||| |||||| |||||||||||||||||   ||||||||||| || ||||||    
T  11628621 cacagtgagtttgttaacccagttcggtg-caacgtcacctactttgggggttaccaaactaggaaggaaatccactcttgtagtccttattcaatagct 11628719  T
Q  145 ctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatc 218  Q
    || |||||||||||||||| ||||| | |||||||||||||||||||  ||||||| ||||||||||||||||||    
T  11628720 cttagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcagcctaggaactcctagatc 11628794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 10251431 - 10251598
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||  | ||||||||||||| |||| || |||||||||||    
T  10251431 ttgttaacccagttcggtgataaacacacctactctggaggctaccaagccaggaaggaaatcttctagtgtagtccttattcta-agttctcagcaaac 10251529  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  | |||| |||  ||||||||||||||||||||| ||||||||| || |||||| ||||||||||    
T  10251530 tccaagcttacaactctagacctaggacctacccgtattgacttcaacataagaactcttagatctgag 10251598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 14975423 - 14975590
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||| ||||||||||||| |||   ||||||||| |||||| |||| || ||||| |||||| || |||||| |||||| || |||||||||| ||||    
T  14975423 tttgttaacccagttcggtg-caacgtcacctactccgggggcaaccatgccaggaacgaaatctactagtgtattccttattcaatagctctcaacaaa 14975521  T
Q  154 ctcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    || ||||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  14975522 cttctcgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 14975590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 15404899 - 15405066
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||| ||||||||||||| |||   ||||||||| |||||| |||| || ||||| |||||| || |||||| |||||| || |||||||||| ||||    
T  15404899 tttgttaacccagttcggtg-caacgtcacctactccgggggcaaccatgccaggaacgaaatctactagtgtattccttattcaatagctctcaacaaa 15404997  T
Q  154 ctcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    || ||||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  15404998 cttctcgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 15405066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 10038902 - 10038728
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctggg------ggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctca 148  Q
    ||||| |||||||||||||||||||||||||||||||||      |||||| |||| |  |||||||||||| ||||||||||||| |||| || ||||     
T  10038902 ttgttaacccagttcggtgacaaacacacctactctgggtttgggggctactaagcaaataaggaaatccactagtgtagtccttattctaaagttctcg 10038803  T
Q  149 gcaaactcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||| ||||||||| || |||||||||||||| | ||| |||||||||||||| |||||||||||||||||    
T  10038802 gcaaactcttcgtttacaacttaagacctaggacctgctcgtctagacttcaacctaagaactcctagatctgag 10038728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 15436065 - 15436199
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacac-taaagacctagg 179  Q
    |||||||||| ||||||||||||| || |||||||||||| ||||||||||||| || | ||||||||||||||||||||||||||| | | ||| ||||    
T  15436065 cacctactctaggggctaccaagccagaaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacttagg 15436164  T
Q  180 acctacccgtatagacttcaacctaggaactccta 214  Q
    |||||||| ||||||||||||| ||||||||||||    
T  15436165 acctacccatatagacttcaacgtaggaactccta 15436199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 55 - 220
Target Start/End: Complemental strand, 23580121 - 23579956
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||||||||||||||| |||||||||||| |||||| |||||||| | |||||||||| || ||||||||||||| | || || | |||||||||    
T  23580121 ttgttaacccagttcggtgactaacacacctactatgggggttaccaagccaagaaggaaatctactagtgtagtccttatttta-agttttcagcaaac 23580023  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctg 220  Q
    ||||||||||| |||| | ||||||||||||||||| | || ||||||||| |||||||||||||||    
T  23580022 tcctcgtttacaactataaacctaggacctacccgtcttgaattcaacctaagaactcctagatctg 23579956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 23082941 - 23082775
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||| ||||| |||||||||||||||  |||||||||||  ||||||||||||||| ||||||||||||| |||| || ||||||||||     
T  23082941 ttgttaacccagtttggtgagaaacacacctactctacgggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaa- 23082843  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     || ||||||| ||| ||||| ||||| ||| |||| ||||||||||||||||||||| ||||||||||    
T  23082842 -ccacgtttacaacttaagacgtaggatctagccgtctagacttcaacctaggaactcatagatctgag 23082775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 12325800 - 12325972
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||||            ||||| ||||||||||||||| ||||||||| ||| ||     
T  12325800 aaagaacaaaatgagtttgttgacttagttcggtgacaaacacacctac------------caagccaggaaggaaatccactagtgtagtcattattca 12325887  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | ||||||||||||||||||| ||||||| | | ||||| ||||||||| ||||||||||||||||||||||||||| |||||||    
T  12325888 aaagctctcagcaaactcctcatttacactttatgaccttggacctacctgtatagacttcaacctaggaactcctacatctgag 12325972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 63 - 222
Target Start/End: Original strand, 23296499 - 23296661
Alignment:
Q  63 ccagttcggtgacaaacacacctactctgggggctaccaagc---taggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctc 159  Q
    |||||||||||||||||||||||||| ||| |||||||||||   |||||||||||||||  ||||||||||||| |||||  || | | |||||||||     
T  23296499 ccagttcggtgacaaacacacctactttggaggctaccaagctaataggaaggaaatccattagtgtagtccttattctatgtct-tgaccaaactcctt 23296597  T
Q  160 gtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | |||| |||  ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  23296598 gcttacaactctagacctaggacctacccgtcttgacttcaacctaggaactcctagatctgag 23296661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 7508426 - 7508592
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||||| ||||||||||||||||| | ||||||||||||| ||||||||||||||| ||||||||| ||| |||| || |||||  ||||    
T  7508426 ttgttaacccagttcgatgacaaacacacctacttttggggctaccaagccaggaaggaaatccactagtgtagtctttattcta-agttctcaaaaaac 7508524  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||| |||  |||||||| |||||  ||  | ||||||||||||||||||||||||||||||    
T  7508525 tcctcgtttacaactctagacctagaaccta-tcggcttgacttcaacctaggaactcctagatctgag 7508592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 24813952 - 24814083
Alignment:
Q  91 gggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttaca-ctaaagacctaggacctacccgt 189  Q
    |||||||||||||| ||||||||||||||| ||||||||||||| | || ||||||||||||||| || ||||| | ||  |||||||||||||||||||    
T  24813952 gggggctaccaagccaggaaggaaatccactagtgtagtccttattgta-agctctcagcaaactactagtttaaaactctagacctaggacctacccgt 24814050  T
Q  190 atagacttcaacctaggaactcctagatctgag 222  Q
    ||  |||||||||||||||||||||||||||||    
T  24814051 atcaacttcaacctaggaactcctagatctgag 24814083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 88 - 222
Target Start/End: Original strand, 15708195 - 15708329
Alignment:
Q  88 tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttaca-ctaaagacctaggacctacc 186  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||| | || || | |||| |||||||||||||||| ||  ||||||| ||||||||    
T  15708195 tctggggtctaccaagctaggaaggaaatccactagtgtagtccttatttta-agttttcagaaaactcctcgtttacaactctagacctacgacctacc 15708293  T
Q  187 cgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| ||||| ||||||||||||||||||||||||    
T  15708294 cgtattgacttgaacctaggaactcctagatctgag 15708329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 21260503 - 21260617
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||  ||||||||||||| |||| || ||||| ||    
T  21260503 agtttgttgatccagttcggtgacaaacacacctactctgggggctaccaacttaggaagaaaatccattagtgtagtccttattctaaagttctcaaca 21260602  T
Q  152 aactcctcgtttaca 166  Q
    |||| ||||||||||    
T  21260603 aactactcgtttaca 21260617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 14687358 - 14687525
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||| ||||||||| ||  |||| || ||||||||||     
T  14687358 ttgttaacctagttcggtgacaaacacacctactatggaggctaccaagctaggaaggaaattcactagtgtagtctttgttcta-agttctcagcaaat 14687456  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||   || || ||| |  ||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  14687457 tccaaattcacaacttataacctaggacctacccatactgacttcaacctaggaactcctagatctgag 14687525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 222
Target Start/End: Complemental strand, 23175050 - 23174881
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    ||||||| ||||||||||||| |||   ||||||| ||| ||||||||||||| ||||||||||||||| ||||||||||||| |||| || | ||||||    
T  23175050 gtttgttaacccagttcggtg-caacatcacctacatctaggggctaccaagccaggaaggaaatccactagtgtagtccttattcta-agttatcagca 23174953  T
Q  152 aactcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||   |||||||||| ||  ||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  23174952 aatctctcgtttacaactctagacctaggacttacccgtattgacttcaacataggaactcctagatctgag 23174881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 23057196 - 23057274
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtcct 132  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||    
T  23057196 tttgttaacccagttcggtgacaaacacacctactctgagggctaccaagccaggaaggaaattcactagtgtagtcct 23057274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 222
Target Start/End: Complemental strand, 10309650 - 10309491
Alignment:
Q  62 cccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgt 161  Q
    |||||||| ||||||||| |||||||||||||||||||||||| | ||||||| ||||| |||||||| |||  |||| |||||||||||||||||  ||    
T  10309650 cccagttcagtgacaaacgcacctactctgggggctaccaagccaagaaggaagtccactagtgtagttcttgttcta-agctctcagcaaactccaagt 10309552  T
Q  162 ttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| || |  ||||||   |||||||||| ||||| |||||| |||||||||||| ||||    
T  10309551 ttacaacttatcacctagacactacccgtattgactt-aacctaagaactcctagatttgag 10309491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 19353122 - 19353288
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||||| |||||| ||||||||||||| ||||||| |||| | ||||||||||||| |||||| | ||| ||||| || |||||||||||    
T  19353122 ttgttaacccagttcgatgacaa-cacacctactctgagggctactaagccaagaaggaaatccactagtgtatttcttgctcta-agttctcagcaaac 19353219  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  ||| || ||| |  ||| | |||||||||||||  ||||||||| |||||||||||||||||||    
T  19353220 tccaagttcacaacttataaccaaagacctacccgtattcacttcaaccgaggaactcctagatctgag 19353288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 222
Target Start/End: Complemental strand, 11407118 - 11406950
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||| || ||||||||| ||| | | |||||||||   | || || |||||||| |    
T  11407118 tttgttaacccagttagatgacaaacacacctactctgggggctaccatgccaggaaggaagtccgctaatgtagtcctagttata-agttctcagcaca 11407020  T
Q  154 ctcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||   ||||||| || |  ||||||   |||||||||| ||||||||||||||||||||||||||||||    
T  11407019 ctcgaagtttacagcttatcacctagacactacccgtattgacttcaacctaggaactcctagatctgag 11406950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 222
Target Start/End: Complemental strand, 20588875 - 20588708
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||| || ||||||||||||||||| || |||| ||||||||||||||| |||||||||||| || ||||||||| ||  |||| || ||||| ||||    
T  20588875 tttgttaactcagttcggtgacaaacaaac-tactttgggggctaccaagccaggaaggaaatcaactagtgtagtcgttgttcta-agttctcaacaaa 20588778  T
Q  154 ctcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||  ||||||| || |  ||||||||||||| || |   ||||||||||| |||||||||||||||||    
T  20588777 ctccaagtttacaatatatcacctaggacctactcgcactaacttcaacctaagaactcctagatctgag 20588708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 222
Target Start/End: Complemental strand, 20596993 - 20596825
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||||| |||  |||| || |||||| |||    
T  20596993 tttgttaaccgagttcggtgacaaacacacctactctgggggctaccaagccaagaaggaaatcgactagtgtagtacttgttcta-agttctcagaaaa 20596895  T
Q  154 ctcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||  |||||| ||| |    |||||||| |   |||   |||||||||||||||||||||||||||||    
T  20596894 ctccaagtttacaacttatcttctaggacccaagtgtactaacttcaacctaggaactcctagatctgag 20596825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 222
Target Start/End: Complemental strand, 26195626 - 26195458
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    ||||||| |||||||||||||   ||| ||||||| ||||| ||||||||||| | |||| |||| ||| | |||| |||||| |||| || ||||||||    
T  26195626 gtttgttaacccagttcggtgc--aactcacctacatctggaggctaccaagccaagaagaaaattcactactgtattccttattcta-agttctcagca 26195530  T
Q  152 aactcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    || |||||||||||| ||  |||||||||||||||| ||||  | ||||||||||||||||||| |||||||    
T  26195529 aattcctcgtttacaactctagacctaggacctacctgtattaaattcaacctaggaactcctaaatctgag 26195458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 53 - 129
Target Start/End: Complemental strand, 31269224 - 31269148
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagt 129  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||| ||||||||    
T  31269224 gtttgttaacccagttcggtgacaaactcacctactccgggggctaccaagccatgaaggaaatccactagtgtagt 31269148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 6045312 - 6045395
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactcta 139  Q
    ||||| ||| |||||||||| |||||| |||||||||||| ||||||||| |||||| |||||||| ||||||||||||| ||||    
T  6045312 ttgtttacctagttcggtgaaaaacacgcctactctgggg-ctaccaagccaggaagaaaatccactagtgtagtccttattcta 6045395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 24049568 - 24049608
Alignment:
Q  182 ctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  24049568 ctacccgtattgacttcaacctaggaactcctagatctgag 24049608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 2076496 - 2076561
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccac 120  Q
    |||||| ||||||||||||| |||   |||||||||||||||||||||||| | |||||||||||||    
T  2076496 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccatgaaggaaatccac 2076561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 2082915 - 2082980
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccac 120  Q
    |||||| ||||||||||||| |||   |||||||||||||||||||||||| | |||||||||||||    
T  2082915 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccatgaaggaaatccac 2082980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 4547852 - 4547811
Alignment:
Q  181 cctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||  ||||||||||| |||||||||||||||||    
T  4547852 cctacccgtatttacttcaacctaagaactcctagatctgag 4547811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 4547923 - 4547851
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatcc 118  Q
    ||||||||||||||| ||||| |||| || |||   |||||||||| ||||||| ||||| |||||||||||||    
T  4547923 cacaatgagtttgttaacccaattcgatg-caacagcacctactctaggggctatcaagccaggaaggaaatcc 4547851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 10660981 - 10661021
Alignment:
Q  182 ctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||| ||||| || |||||||||||||||||||||||||||    
T  10660981 ctactcgtattgatttcaacctaggaactcctagatctgag 10661021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 156; Significance: 6e-83; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 295435 - 295618
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||    
T  295435 aaagaacacagtgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattct 295534  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  295535 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacttaggaactcctagatctgag 295618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 17702381 - 17702565
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||     
T  17702381 aaagaacacaatgagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattca 17702480  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17702481 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttaaacctaggaactcctagatctgag 17702565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 13790654 - 13790838
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||  || ||||||||||||| ||     
T  13790654 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactatgggggctaccaagccaagaaggaaatatactagtgtagtccttattca 13790753  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13790754 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 13790838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 28051111 - 28051294
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||    
T  28051111 aaagaacacggtgagtttgttgacccagtttggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattct 28051210  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||| |||| || |||||||||||||||||||||||||||    
T  28051211 atagctctcagcaaactcctcgtttacactaaaggcctaggacatacctgtattgatttcaacctaggaactcctagatctgag 28051294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 52 - 222
Target Start/End: Complemental strand, 6581037 - 6580867
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||    
T  6581037 agtttgttaacccagttcggtgacaaacacacctactctgaaggctaccaagccagcaaggaaatccactagtgtagtccttattctatagctctcagca 6580938  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  6580937 aactcctcgtttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgag 6580867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 18064384 - 18064206
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||| ||||||||||||| ||||||||    
T  18064384 acacaatgagtttgttaacccagttcggtgacaaacacacctactctagaggctaccaaggcaggaaggaaatccactagtgtagtccttattctatagc 18064285  T
Q  144 tctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  18064284 tctcaacaaactcctcgtttacactaaagacctaggacctaaccgtattgatttcaacctaggaactcctagatctgag 18064206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 15636057 - 15635873
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||     
T  15636057 aaagaacacaatgagtttgatgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattca 15635958  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||| ||||||||||||||||||| | || |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  15635957 atagctctcagtaaactcctcgtttacactatatgatctaggacctacccgtatagacttcaaactaggaactcctagatatgag 15635873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 18035074 - 18034896
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||| |||||||     
T  18035074 acacaatgagtttgttaacccagttcggtgacaaacacacctactcttgaggctaccaagccaggaaggaaatccactagtgtagtccttattctatagg 18034975  T
Q  144 tctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  18034974 tctcagcaaactcctcatttacaccaaagacctaggacctacccgtatctatttcaacctaggaactcctagatctgag 18034896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 24195499 - 24195682
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | ||||||||||||| ||||||||||||| ||     
T  24195499 aaagaacacaatgagtttgttgacccagttcggtgaaaaacacacctactctgggg-ctaccaagccaagaaggaaatccactagtgtagtccttattca 24195597  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||| ||||||||| | ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  24195598 atagctctcagcaaactcctcatttacactatatgacctaggagctacctgtatagacttcaacctaggaactcctagatctgag 24195682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 44452455 - 44452639
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactc 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||| |||||||| |||| ||    
T  44452455 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctacgtctaggggct-ccaagccaggaaggaaatccactagtgtagttcttattc 44452553  T
Q  138 tatagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     ||||||||||||||||||||||||||||||| | |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  44452554 aatagctctcagcaaactcctcgtttacactatatgacccatgacctacccgtatagacttcaacctaggaactcctagatctgag 44452639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 41 - 219
Target Start/End: Original strand, 18547625 - 18547804
Alignment:
Q  41 agaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctat 140  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| || ||    
T  18547625 agaatacaatgagtttgttgacccaattcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattcaat 18547724  T
Q  141 agctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
    ||||||  ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  18547725 agctcttggcaaactcctcgtttacactatatgacctaagacctacccgtatagacttcaacctaggaactcatagatct 18547804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 52 - 222
Target Start/End: Complemental strand, 17042924 - 17042754
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| | |||||| ||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||| ||    
T  17042924 agtttgttaaaccagtttggtgacaaacacacctactctggaggctaccaaggcaggaaggaaatccactagtgtagtccttattctatagctctcaaca 17042825  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||||| |||||||||||||||||||    
T  17042824 aactcctcgtttaaactaaagacctaggacctacccgtattgatttcaacccaggaactcctagatctgag 17042754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 23954741 - 23954557
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||  ||| ||||| ||| ||     
T  23954741 aaagaatacaatgagtttgttgatccagttcggtggcaaacacacctactctggaggctaccaagccaggaaggaaatccattagtttagtcattattca 23954642  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||| ||||    
T  23954641 atagctctcagcaaactcctcgtttacactatatgacctaggacctacctgtatatacttcaacctaggaactcctagatttgag 23954557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 19633866 - 19634035
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||| |||||||||||||| ||||| | |||||||||| ||||||| ||| ||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  19633866 aacacagtgagtttgttgacctagttcagcgacaaacacatctactctaggg-ctaccaagccaggaaggaaatccactagtgtagtccttattctatag 19633964  T
Q  143 ctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcct 213  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  19633965 ctctcagcaaactcctcgtttacactaaagatataggacctacccgtatagacttcaacctaagaactcct 19634035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 9036689 - 9036865
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| ||| |||||| ||||||||||||| |||   ||| |||||||||||||||||| | ||||||||||||||| ||||||||||||| || ||||||    
T  9036689 cacagtgaatttgttaacccagttcggtg-caacatcacatactctgggggctaccaaaccaggaaggaaatccactagtgtagtccttattcaatagct 9036787  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9036788 ctcagcaaactcctcgtttgcactaaagacctaggacctacccgtattgacttcaacctaggaactcctagatctgag 9036865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 9031558 - 9031382
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||||||||||||| ||||||||||||| |||   |||||||||||||||||||||||  ||||||||||||||| ||||||||||||| || ||||||    
T  9031558 cacaatgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 9031460  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||   |||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  9031459 ctcagcaaactcctcgtttgtgctaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 9031382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 13524864 - 13524707
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  | |||||||||||||  |||||||||||| |||    
T  13524864 aaagaacaaaatgagtttgttgacccagttcggtcacaaa-acacctactctgggggctaccaagtcaagaaggaaatccactggtgtagtccttattct 13524766  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagactt 197  Q
    |||| |||||||||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  13524765 atagttctcagcaaactcctcatttacactaaagacctagtacctatccgtatagactt 13524707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 7496104 - 7495929
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||| ||||||||| || |||||||||| |||   | |||| | ||||||||| ||||| |||| |||||||||| ||||||||||||| ||| |||||    
T  7496104 cacaaagagtttgttaactcagttcggtg-caacatcgcctaatttgggggctatcaagccagga-ggaaatccactagtgtagtccttattctctagct 7496007  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  7496006 ctcagcaaactcctcgtttacactaaagacctaggacctacccatattgacttcaacctaggaactcctagatctgag 7495929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 15686329 - 15686159
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||| |||| || |||||||    
T  15686329 gagtttgttgacccagttcgatgacaaacacacctactctaggggctaccaagccaggaaggaaatccattagtgtagtccttattctaaagttctcagc 15686230  T
Q  151 aaactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  || ||||||| ||| |||||||| |||||||| || |||||||||||| |||||||||||||||||||    
T  15686229 aaa--ccacgtttacaacttaagacctatgacctacctgtctagacttcaacccaggaactcctagatctgag 15686159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 13913779 - 13913948
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| |||| |||||||| |||   |||||||||||||||||||||||| |||| |||||||| | |||||| |||||| ||| |||||||||||    
T  13913779 gagtttgttaacccggttcggtg-caacgtcacctactctgggggctaccaagccagga-ggaaatccgctagtgtactccttattctctagctctcagc 13913876  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||| |||||||| |  |||||||||||||||||||||||||||||    
T  13913877 aaactcctcgtttacactaaagacctaggatctacccgttttaacttcaacctaggaactcctagatctgag 13913948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 7479313 - 7479138
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||| ||||||||| || |||||||||| |||   | |||| ||||||||||||||||| |||| |||||||||| ||||||||||||| ||| |||||    
T  7479313 cacaaagagtttgttaactcagttcggtg-caacgtcgcctaatctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctctagct 7479216  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| || ||| |||||||||||||    
T  7479215 ctcagcaaactcctcgtttacactaaagacctaggacctacccatattgacttcaacatatgaagtcctagatctgag 7479138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 76 - 213
Target Start/End: Original strand, 8224850 - 8224989
Alignment:
Q  76 aaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta-aaga 173  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| | ||    
T  8224850 aaactcacctacatctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatga 8224949  T
Q  174 cctaggacctacccgtatagacttcaacctaggaactcct 213  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  8224950 cctaagacctacccgtatagtcttcaacctaggaactcct 8224989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 8749059 - 8749197
Alignment:
Q  84 ctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacct 183  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||| || || |||||||||||||| |||||||||| |||||| ||||||||| ||    
T  8749059 ctactctggggactaccaagctaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaagctcctcgtttgcactaatgacctaggatct 8749158  T
Q  184 acccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||   |||||||||||||||||||||||||||||    
T  8749159 acccgtactaacttcaacctaggaactcctagatctgag 8749197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 18476957 - 18477087
Alignment:
Q  92 ggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtat 191  Q
    ||||||||||||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||| ||||| || ||||||| |||||    
T  18476957 ggggctaccaagccaggaaggaaatccactagtgtagtccttattctaaagctctcagcaaactcctcgtttacacttaagacataagacctactcgtat 18477056  T
Q  192 agacttcaacctaggaactcctagatctgag 222  Q
    ||||||||| |||||||||||||||| ||||    
T  18477057 agacttcaaactaggaactcctagatttgag 18477087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 45 - 217
Target Start/End: Complemental strand, 12054624 - 12054454
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| ||||||| || ||||||||||||| |||   |||||||||| |||| ||||||||| ||| ||||||| |||||||||||||||| ||| |||||    
T  12054624 cacagtgagtttcttaacccagttcggtg-caatgtcacctactctaggggataccaagctcgga-ggaaatctacaagtgtagtccttattctctagct 12054527  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagat 217  Q
    |||||||||||||||||||||||||||||||| ||||||||| || | ||||||||||||| |||||||||||    
T  12054526 ctcagcaaactcctcgtttacactaaagaccttggacctacctgtcttgacttcaacctagaaactcctagat 12054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 13917831 - 13918000
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||| ||||||| |||   |||||||||||||||||||||||| || |||||||||||  |||||| |||||| ||| |||||||||||    
T  13917831 gagtttgttaacccaattcggtg-caacgtcacctactctgggggctaccaagccag-aaggaaatccaatagtgtactccttattctctagctctcagc 13917928  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| |||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||| ||||    
T  13917929 aaattcctcgtttacactaaagacctaggacctacctgtcctgacttcaacctaggaactcctagatatgag 13918000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 71 - 222
Target Start/End: Complemental strand, 21719076 - 21718926
Alignment:
Q  71 gtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaa 170  Q
    ||||||||||||||||||||  || ||||||||| ||||||||||||||| ||||||||||||| |||| || | ||| |||| |||||||||||||| |    
T  21719076 gtgacaaacacacctactctaagg-ctaccaagccaggaaggaaatccactagtgtagtccttattctaaagttttcaacaaaatcctcgtttacactta 21718978  T
Q  171 agacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  21718977 agacctaggatctacccgtctagactttaacctaggaactcctagatctgag 21718926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 287065 - 286892
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    |||||||||| ||| |||||| |||||||||||| |||| ||||| ||||||| | ||||||||||||||| ||| ||||||||| ||||  | ||||||    
T  287065 tgagtttgttaacctagttcgatgacaaacacacttactatggggactaccaaaccaggaaggaaatccactagtatagtccttattctaatgttctcag 286966  T
Q  150 caaactcctcgttta-cactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     |||||||| |||||  ||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  286965 gaaactccttgtttataacacaagacctaggacctacccgtctagatttcaacctaggaactcctagatctgag 286892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 39 - 156
Target Start/End: Complemental strand, 19532067 - 19531950
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||| ||     
T  19532067 aaagaacacaatgagtttgttgatccaattcggtgacaaacacacctactttgggggctaccaagccaggaaggaaatccactagtgtcgtccttattca 19531968  T
Q  139 atagctctcagcaaactc 156  Q
    ||||||||||| ||||||    
T  19531967 atagctctcagaaaactc 19531950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 63 - 222
Target Start/End: Original strand, 31649690 - 31649847
Alignment:
Q  63 ccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtt 162  Q
    |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||  |||||||||||| ||||  | |||||||||||||||||||    
T  31649690 ccagttcggtgacaaacacacctactctgggt-ctaccaagccaggaaggaaatccactcgtgtagtccttattcta--gttctcagcaaactcctcgtt 31649786  T
Q  163 taca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||| ||  ||||||||||||||||||| | ||||||||||||| || ||||| |||||||    
T  31649787 tacaactctagacctaggacctacccgtcttgacttcaacctagaaaatcctatatctgag 31649847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 1919415 - 1919251
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||||||| | |||||||||||||   ||||||||||| || ||||    
T  1919415 aacacaatgagtttgttgacccagttccatgacaaacacacctactatgggg-ctaccaagccaagaaggaaatccactgatgtagtccttattcaatag 1919317  T
Q  143 ctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactccta 214  Q
    || ||||||||||| ||||||||||||      || |||||||||||||||  |||||||||||||||||||    
T  1919316 ctttcagcaaactcttcgtttacacta------tatgacctacccgtatagttttcaacctaggaactccta 1919251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 20748346 - 20748164
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||| |||||||||||| ||||||||||||| |||   |||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||| |      
T  20748346 aaagaacataatgagtttgttaacccagttcggtg-caacatcacctactttgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattga 20748249  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | |||||||| ||||||| |||||||||| | | |||||||||||||||  | ||||||||||||||| ||||||||||||||||    
T  20748248 aaagctctcaacaaactcatcgtttacactttatgacctaggacctaccaatctagacttcaacctagaaactcctagatctgag 20748164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 11656010 - 11656181
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| |||||||| |||| |||   |||||||||||| ||||||||||  ||||| ||||| ||| |||||||||||||  | | |||||||||||    
T  11656010 agtttgttaacccagtttggtg-caatgtcacctactctggaggctaccaagtcaggaaagaaattcactagtgtagtccttatccaaaagctctcagca 11656108  T
Q  152 aactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgagt 223  Q
    |||||||||||||||| | | |||||||||||| ||||||||| ||||||||||||||||||||||| |||||    
T  11656109 aactcctcgtttacactttatgacctaggacctgcccgtatagccttcaacctaggaactcctagatttgagt 11656181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 222
Target Start/End: Complemental strand, 21094866 - 21094702
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||||||| ||||||   ||||||||||||||||||||| ||||||||  ||||||||||| ||| ||||||||||||| |||| || |||||| |||    
T  21094866 tttgttgacctagttcg---acaaacacacctactctgggg-ctaccaagtcaggaaggaaattcactagtgtagtccttattctaaagttctcagtaaa 21094771  T
Q  154 ctcctcgtttac-actaaagacctaggacctacccgtatag-acttcaacctaggaactcctagatctgag 222  Q
      || ||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  21094770 --ccacgtttacaacttaagacctaggacctacccgtctagaacttcaacctaggaactcctagatctgag 21094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 222
Target Start/End: Complemental strand, 3552373 - 3552214
Alignment:
Q  63 ccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtt 162  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||| |||||||  ||||||||||||| |||| || ||| | |||||||||||||    
T  3552373 ccagttcggtgacaaacgcacctactcttggggctaccaagccaggaagaaaatccagtagtgtagtccttattcta-agttctaaacaaactcctcgtt 3552275  T
Q  163 tac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| |||  ||||||| ||||||| ||| | ||||||||| ||||||||||| ||||||||    
T  3552274 tacaactctagacctaagacctactcgtcttgacttcaacttaggaactccttgatctgag 3552214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 219
Target Start/End: Complemental strand, 980533 - 980370
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||||||| ||||| | |||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||||||  ||| || | |||| |||    
T  980533 tttgttgacctagttcagagacaaacacacctattttgggggctaccaagcaaggaaggaaatccactagtgtagtccttatactaaagttttcagtaaa 980434  T
Q  154 ctcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
      || ||||||| ||| ||||| ||| ||||||| || |||||||||||||| ||||||||||||||    
T  980433 --ccacgtttacaacttaagacatagaacctacctgtctagacttcaaccta-gaactcctagatct 980370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 11558489 - 11558324
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||||| |||||| ||| || || | |||| |||||    
T  11558489 gagtttgttaaccaagttcggtgacaa-cacacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattcaaaagctttcagc 11558391  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  || ||||| |||||| |||||||||||||||   |  || |||||||||||||||||||||| ||||    
T  11558390 aaa--ccacgtttgcactaatgacctaggacctacc---actgatttcaacctaggaactcctagatttgag 11558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 11567758 - 11567593
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||| ||||||||||||| |||||||||| ||| ||||||||||| ||||||||||||||| |||||| ||| || || | |||| |||||    
T  11567758 gagtttgttaaccaagttcggtgacaa-cacacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattcaaaagctttcagc 11567660  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  || ||||| |||||| |||||||||||||||   |  || |||||||||||||||||||||| ||||    
T  11567659 aaa--ccacgtttgcactaatgacctaggacctacc---actgatttcaacctaggaactcctagatttgag 11567593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 222
Target Start/End: Complemental strand, 21254094 - 21253993
Alignment:
Q  122 agtgtagtccttactctatagctctcagcaaactcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctg 220  Q
    ||||||||||||| ||||||| ||||| ||||||||||||| ||| |||||||||||||||||||| || ||||||||||||||||||||  ||||||||    
T  21254094 agtgtagtccttattctatagttctcaacaaactcctcgttcacaactaaagacctaggacctacctgtctagacttcaacctaggaacttttagatctg 21253995  T
Q  221 ag 222  Q
    ||    
T  21253994 ag 21253993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 14406799 - 14406722
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtc 130  Q
    ||||||| |||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||| | |||||||    
T  14406799 gtttgttaacccagttcggtgacaaacacacctactttgtgggctaccaagccaggaaggaaatccaccaatgtagtc 14406722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 18483444 - 18483371
Alignment:
Q  150 caaactcctcgtttacactaaa-gacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  18483444 caaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaacacctggatctgag 18483371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 215397 - 215346
Alignment:
Q  171 agacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||| ||||    
T  215397 agacctagaacctacccgtattgacttcaacctaggaacttctagatatgag 215346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 222
Target Start/End: Complemental strand, 3445174 - 3445006
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaa 152  Q
    ||||||| || ||||| ||||| ||||||||||||||| | ||||| ||||  ||||||||||||||| ||||||||| |   |||| || ||||| |||    
T  3445174 gtttgttaactcagtttggtgataaacacacctactct-gaggctatcaagtcaggaaggaaatccactagtgtagtcttagttcta-agttctcaacaa 3445077  T
Q  153 actcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| |  |||||| ||| |  ||||||   |||||| ||| ||||||||||||||| || |||||||||||    
T  3445076 actgcaagtttacaacttatcacctagacactacccatattgacttcaacctaggagctactagatctgag 3445006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 15686417 - 15686451
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacct 85  Q
    |||||||||||||||||||||||||||||||||||    
T  15686417 gagtttgttgacccagttcggtgacaaacacacct 15686451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 13100770 - 13100723
Alignment:
Q  175 ctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||| | |||||||| ||||||||| |||||||||||    
T  13100770 ctaggacctacccgtcttgacttcaatctaggaacttctagatctgag 13100723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 10082443 - 10082380
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaat 116  Q
    ||||||| ||||||||||||| |||   ||||||| ||| |||||||||||||||||||||||||    
T  10082443 gtttgttaacccagttcggtg-caacgtcacctacatctaggggctaccaagctaggaaggaaat 10082380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 20470387 - 20470204
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||| |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||| |||||| |||||| |||    
T  20470387 aaagaacataatgagtttgttgacccagttcggcgacaatcacacctactctggaggctaccaagccaggaaggaaatccactagtgtactccttattct 20470288  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20470287 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 20470204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 17855169 - 17855353
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||||||||||| ||     
T  17855169 aaagaacgcaatgagtttgttgacccagatcggtgacaaacacacctactctggaggctatcaagccaggaaggaaatccactagtgtagtccttattca 17855268  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17855269 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 17855353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 39 - 214
Target Start/End: Complemental strand, 12039866 - 12039691
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||  | ||||||||||||| |||    
T  12039866 aaagaacacaatgagtttgttgacctagttcggtgacgaacacacctactttgggggctaccaagctaggaaggaaatcttctagtgtagtccttattct 12039767  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactccta 214  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12039766 atagctctcaacaaactcctcgtttacactaaagacctaggacctactcgtatagacttcaacctaggaactccta 12039691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 13195298 - 13195482
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | ||||||||||||| ||||||||||||| ||     
T  13195298 aaagaacacaatgagtttgttgacctagttcgatgacaaacacacctactctaggggctaccaagccatgaaggaaatccactagtgtagtccttattca 13195397  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13195398 atagctctcagaaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 13195482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 43 - 222
Target Start/End: Original strand, 33665772 - 33665952
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||| || ||||    
T  33665772 aacacaatgagtttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaggaaggaaatccactagtgtagtccttattcaatag 33665871  T
Q  143 ctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  33665872 ctctcagcaaactcctcgtttacactatatgacataggacctacccgtatagacttcaaccaaggaactcctagatctgag 33665952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 15897858 - 15897675
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  15897858 aaagaacaaaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattct 15897759  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||| |||||||||||| |||||| ||| |||||||||||||||| ||||||| | |||||||||||  |||||||||||    
T  15897758 atagctcttagcaaactcctcatttacaataacgacctaggacctacccatatagacgtaaacctaggaacgactagatctgag 15897675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 25805428 - 25805611
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||| |||||| | |||| ||||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||| | |    
T  25805428 aaagaacacaatgattttgttaaaccagatcggtgacaaacacacctactctagaggctaccaagccaggaaggaaatccactagtgtagtccttattat 25805527  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  25805528 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgag 25805611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 42 - 222
Target Start/End: Complemental strand, 9281890 - 9281709
Alignment:
Q  42 gaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctata 141  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||| || |||    
T  9281890 gaacacaatgagtttgttgatctagttcggtgacaaacacacctactctgggggctaccaagcctggaaggaaatccactagtgtagtccttattcaata 9281791  T
Q  142 gctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  9281790 gctctcagcaaactcctcgtttacactatatgacctaagacctacccgtatagacttcaacctaggaactcctagatttgag 9281709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 42 - 222
Target Start/End: Complemental strand, 17864606 - 17864426
Alignment:
Q  42 gaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctata 141  Q
    ||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||| | |||||| |||||||| ||||||||||||| ||||||    
T  17864606 gaacacagtaagtttgttgacctagttcggtgacaaacacacctactctgggggttaccaatccaggaagaaaatccactagtgtagtccttattctata 17864507  T
Q  142 gctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  17864506 gctctcagcaaactcctcgtttacactaaagtactaggacctacctgtatagacttcaacctaggaactcctagatctgag 17864426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 43 - 218
Target Start/End: Complemental strand, 20989945 - 20989770
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  || |||||||||||| ||||||||||||| |||||||    
T  20989945 aacacaatgagtttgttgacccagttcggtgacagacacacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatag 20989846  T
Q  143 ctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatc 218  Q
    |||||||||||||||||||||||| |||||||||| |||||||| |||||||||| ||||||| ||||||||||||    
T  20989845 ctctcagcaaactcctcgtttacattaaagacctatgacctacctgtatagacttgaacctagaaactcctagatc 20989770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 39 - 221
Target Start/End: Complemental strand, 23882878 - 23882696
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||| ||| |||    
T  23882878 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaaatcaggaaggaaatccactagtgtagtctttattct 23882779  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 221  Q
    ||||||| |||||||||| | ||||||||||||||||||||||||||| |||| || ||||||||| ||||||||||||||||    
T  23882778 atagctcccagcaaactctttgtttacactaaagacctaggacctacctgtattgatttcaacctatgaactcctagatctga 23882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 39 - 221
Target Start/End: Original strand, 17234566 - 17234749
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||   ||||||||||||| ||||||||||||| ||     
T  17234566 aaagaacacaatgagtttgttgacccagtttggtgacaaacacacctactctaggggctaccaagcccagaaggaaatccaccagtgtagtccttattca 17234665  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 221  Q
    ||||||||| |||||||||  |||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17234666 atagctctctgcaaactccctgtttacactatatgacctatgacctacccgtatagacttcaacctaggaactcctagatctga 17234749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 52 - 219
Target Start/End: Original strand, 24501812 - 24501979
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| |||||||||||||||||||||||||||||| | ||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||    
T  24501812 agtttgttaacccagttcggtgacaaacacacctactctagaggctaccaagccagaaaggaaatccactagtgtagtccttattctatagctctcagca 24501911  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
    |||||||| ||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||    
T  24501912 aactcctcatttacactaaagacctaggacctacccgtattgatttcaacctagaaactcctagatct 24501979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 8465852 - 8465673
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||     ||| | |||||||||||||||||    
T  8465852 aaagaacacaatgagtttgttgacccatttcggtgacaaacacacctactctgggggctgccaagccaggaat----tccgctagtgtagtccttactct 8465757  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  8465756 atagctctcagcaaactccaaatttacactaaagacctaggacctacccgtatagacttcaatcttggaactcctagatctgag 8465673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 14258885 - 14259069
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| ||     
T  14258885 aaagaacacaatgagtttgttgacccagttcggtgagaaacacacctactttgggggctaccaagcgaggaaggaaatccactagtgtagtccttattca 14258984  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||| ||||||  ||||||||| || | ||||||||||||||||||||||||||| || || |||||||||||||||||    
T  14258985 atagctctcaacaaacttatcgtttacaatatatgacctaggacctacccgtatagacttccacttatgaactcctagatctgag 14259069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 52 - 222
Target Start/End: Complemental strand, 26965742 - 26965571
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||  ||||||||||||||| ||||||||||||| |||| || ||||||||    
T  26965742 agtttgttgacccagttcggtgacaaacacacctactctggaggctatcaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagca 26965643  T
Q  152 aactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26965642 aactcctcatttacaacttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctgag 26965571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 29255099 - 29254917
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||  |||||||||||||||||||| ||| |||||||||||||||| ||| ||| ||||| |||||| |||||||| ||||||||||||| |||    
T  29255099 aaagaacacggtgagtttgttgacccagttcagtggcaaacacacctactctaggg-ctatcaagccaggaagaaaatccactagtgtagtccttattct 29255001  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| || |||||||||||||||||    
T  29255000 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacttatgaactcctagatctgag 29254917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 39 - 217
Target Start/End: Complemental strand, 21706534 - 21706355
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactc 137  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||| || ||||||| || |||||||||| |||||||| ||||||||||||| ||    
T  21706534 aaagaacacaatgagtttgttaacccagtttggtgacaaacacacctacgtccgggggct-cctagctaggaagaaaatccactagtgtagtccttattc 21706436  T
Q  138 tatagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagat 217  Q
     ||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||  |||||||||||||||||||||    
T  21706435 aatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagatatcaacctaggaactcctagat 21706355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 39 - 218
Target Start/End: Complemental strand, 17528069 - 17527889
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||||||| | ||||||||||||| || |||  ||||||| ||||||||||||| ||     
T  17528069 aaagaacacagtgagtttgttaacccagttcagtgacaaacacacctactattggggctaccaagccagaaagttaatccactagtgtagtccttattca 17527970  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatc 218  Q
    |||| ||||||||||||||| |||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  17527969 atagttctcagcaaactccttgtttacactatatgacctaggacctacccatatagacttcaacctaggaactcatagatc 17527889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 52 - 222
Target Start/End: Complemental strand, 16309527 - 16309359
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| ||||||||| ||| |||   |||||||||||||||||||||||| |||| |||||||||| ||| ||||||||| ||| ||||||||||||    
T  16309527 agtttgttaacccagttcagtg-caacgtcacctactctgggggctaccaagccagga-ggaaatccactagtatagtccttattctctagctctcagca 16309430  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  16309429 aactcctcgtttacactaaagacctaggacctacccgtcttgacttcaacctaggaactcgtagatctgag 16309359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 12444891 - 12444723
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||||| || || | ||||||||||    
T  12444891 gagtttgttaacccagttcggtgacaa-cacacctactctggaggctaccaagctaggaaggaactccactagtgtagtccgtattcaaaagctctcagc 12444793  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  || ||||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  12444792 aaa--ccacgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatttgag 12444723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 20558277 - 20558460
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||| ||||||||||||| |||   |||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||| |||    
T  20558277 aaagaacacagtgagtttgttaacccagttcggtg-caacgtcacctagtctggaggctaccaagccaggaaggaaatccactagtgtagcccttattct 20558375  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | | ||||||||||||||||||||||||| | | |||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  20558376 aaaactctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaagaactcctagatatgag 20558460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 72 - 222
Target Start/End: Complemental strand, 21723560 - 21723409
Alignment:
Q  72 tgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta- 169  Q
    ||||||| |||||||| |||||||||| |||||| ||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||     
T  21723560 tgacaaatacacctacgtctgggggct-ccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactat 21723462  T
Q  170 aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  21723461 atgacctaggacctacccgtctagatttcaacctaggaactcctagatctgag 21723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 16137759 - 16137583
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||||||||||||| |||||||| | || |||   ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| || ||||||    
T  16137759 cacaatgagtttgttaacccagtttgatg-caacgtcacctactctgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 16137661  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| || ||| ||||||||| |||||||||  ||||||||||||||||||| || |||||||    
T  16137660 ctcagcaaactcctcgtttgcagtaatgacctaggatctacccgtactgacttcaacctaggaactcataaatctgag 16137583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 34657335 - 34657152
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactc 137  Q
    ||||||||||  ||||||||| |||||||||||  |||| | ||||||| ||| ||||||||||||| | ||||||||||||| ||||||||||||| ||    
T  34657335 aaagaacacagagagtttgttaacccagttcggc-acaa-ctcacctacatctaggggctaccaagccaagaaggaaatccactagtgtagtccttattc 34657238  T
Q  138 tatagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     ||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||||||||| |||||||||    
T  34657237 aatagctctcagcaaactcctcgtttacactatatgacctaggaccaacccgtatagatttcaacctaggaactcccagatctgag 34657152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 222
Target Start/End: Original strand, 15038328 - 15038505
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    ||||| |||||||||| |||||||| |||| |||   |||||||||||||||||||||||  ||||||||||||||| |||||||||| || || |||||    
T  15038328 acacagtgagtttgttaacccagtttggtg-caacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgtattcaatagc 15038426  T
Q  144 tctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||| ||||||||||||| ||| || ||||||||||| |||||||  ||||||||||||| ||||||||||||||||    
T  15038427 tctcaggaaactcctcgtttgcacaaatgacctaggaccaacccgtactgacttcaacctagtaactcctagatctgag 15038505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 25964722 - 25964853
Alignment:
Q  92 ggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaa-gacctaggacctacccgta 190  Q
    ||||||||||||| ||||||||||||||| || |||||||||| |||||||| || || |||||| |||||||||||| | |||||||||||||||||||    
T  25964722 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25964821  T
Q  191 tagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||    
T  25964822 tagacttcaacctaggaactcctagatctgag 25964853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 25969369 - 25969500
Alignment:
Q  92 ggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaa-gacctaggacctacccgta 190  Q
    ||||||||||||| ||||||||||||||| || |||||||||| |||||||| || || |||||| |||||||||||| | |||||||||||||||||||    
T  25969369 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25969468  T
Q  191 tagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||    
T  25969469 tagacttcaacctaggaactcctagatctgag 25969500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 25973809 - 25973940
Alignment:
Q  92 ggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaa-gacctaggacctacccgta 190  Q
    ||||||||||||| ||||||||||||||| || |||||||||| |||||||| || || |||||| |||||||||||| | |||||||||||||||||||    
T  25973809 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25973908  T
Q  191 tagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||    
T  25973909 tagacttcaacctaggaactcctagatctgag 25973940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 45 - 211
Target Start/End: Original strand, 9384595 - 9384761
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| |||||||||||| ||||   | |||| ||||| ||||||||||  ||||||||||||||| ||||||||||||| || ||||||    
T  9384595 cacagtgagtttgttaacccagttcggt-acaacgtcgcctattctggtggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 9384693  T
Q  145 ctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactc 211  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||  |||||||||||||||||||    
T  9384694 ctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactc 9384761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 15003340 - 15003163
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||| ||| ||||||||||||| |||   |||||||||||| || |||||||| | ||||||||||||| ||||||||||||| || ||||||    
T  15003340 cacagtgagttcgttaacccagttcggtg-caatgtcacctactctggtggataccaagccatgaaggaaatccactagtgtagtccttattcaatagct 15003242  T
Q  145 ctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||| |||| ||||| | |||||||||||||||||||  ||||||||| ||||||||||||||| ||||    
T  15003241 ctcagcaaactccttgtttgcactatatgacctaggacctacccgtactgacttcaacataggaactcctagatttgag 15003163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 28623516 - 28623686
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    ||||||||| |||||||||||  |||| | ||||||| ||| ||||||||||||| |||||||||||  || ||||||||||||| |||| |||||| ||    
T  28623516 gagtttgttaacccagttcggc-acaa-ctcacctacatctaggggctaccaagccaggaaggaaataaactagtgtagtccttattctaaagctctgag 28623613  T
Q  150 caaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||| || ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  28623614 caaaatcttcgtttacacttaagacctaggacctacccgtattgatttcaacctaggaactcctagatttgag 28623686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 30424926 - 30425093
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||  |||||| | |||| |||| || |||||||||||    
T  30424926 ttgttgaaccagttcggtgacaaacacacctactctaggggctaccaagccaagaaggaaatccattagtgtaattcttattcta-agttctcagcaaac 30425024  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  |||||| |||  |||||||||||||||  |||| |||||||||||||||||| |||||||||||    
T  30425025 tccaagtttacaactctagacctaggacctacttgtattgacttcaacctaggaacttctagatctgag 30425093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 45 - 215
Target Start/End: Complemental strand, 15007513 - 15007344
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| |||||||||| || ||||  ||||||||||||||  |||||||| | ||||||||||||| |||||||| |||| || ||||||    
T  15007513 cacagtgagtttgttaacccagttcgatg-caaagtcacctactctgggga-taccaagccatgaaggaaatccactagtgtagtacttattcaatagct 15007416  T
Q  145 ctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctag 215  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||   |||||||||||||||||||||||    
T  15007415 ctcagcaaactcctcgtttgcactatatgacctaggacctacccgtgctgacttcaacctaggaactcctag 15007344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 19215935 - 19216111
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||| |||  |||||||| ||||||||||||||| |||||||||| || || ||||||    
T  19215935 cacattgagtttgttaacccagttcggtg-caacgtcacctactctaggga-taccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 19216032  T
Q  145 ctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| ||||| | |||||||||||||||||||   |||||||| ||||||||||||||| ||||    
T  19216033 ctcagcaaactcctcgttttcactatatgacctaggacctacccgtactaacttcaacttaggaactcctagatttgag 19216111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 20003118 - 20003295
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||||||||||||  ||||||||||||| |||   |||||||| | ||||||||||||| |||||||||||| || |||||||| |||| || ||||||    
T  20003118 cacaatgagtttgtgaacccagttcggtg-caacgtcacctactttaggggctaccaagccaggaaggaaatcaactagtgtagttcttattcaatagct 20003216  T
Q  145 ctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| |||| |||||||| ||||| | |||||||||||||||||||   |||||||||||||||||||||||| ||||    
T  20003217 ctcaggaaacccctcgtttgcactatatgacctaggacctacccgtacttacttcaacctaggaactcctagatttgag 20003295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 55 - 221
Target Start/End: Original strand, 11960472 - 11960640
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtcctt-actctatagctctcagcaaa 153  Q
    ||||| ||||| ||| ||||||||||||||||| ||   ||||||||||| | |||||||||| |  ||||||||| || | |||| || ||||||||||    
T  11960472 ttgttaacccaattcagtgacaaacacacctaccctcaaggctaccaagccacgaaggaaatctattagtgtagtcttttattctaaagttctcagcaaa 11960571  T
Q  154 ctcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 221  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  11960572 ctcctcgtttacaactgaagacctaggacctacccgtctagacttcaacctaggaactcctacatctga 11960640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 92 - 219
Target Start/End: Complemental strand, 3567553 - 3567426
Alignment:
Q  92 ggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtat 191  Q
    |||||||||||| |||||| | ||||||| |||||||| |||| |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  3567553 ggggctaccaagttaggaaagtaatccactagtgtagttcttattctaaagctctcagcaaaatcctcgtttacacttaagacctaggacctacccgtat 3567454  T
Q  192 agacttcaacctaggaactcctagatct 219  Q
     || ||||||||| ||||| ||||||||    
T  3567453 tgatttcaacctaagaacttctagatct 3567426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 19171452 - 19171574
Alignment:
Q  101 aagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaa-gacctaggacctacccgtatagacttca 199  Q
    |||||||||||||||||||| ||||||||||||| || ||| ||||||||||| |||| | ||| |||| | ||||||||||||||||||||||||||||    
T  19171452 aagctaggaaggaaatccactagtgtagtccttattcaataactctcagcaaagtccttgcttatactatatgacctaggacctacccgtatagacttca 19171551  T
Q  200 acctaggaactcctagatctgag 222  Q
    ||||| |||||||||||||||||    
T  19171552 acctatgaactcctagatctgag 19171574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 20765156 - 20764995
Alignment:
Q  61 acccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcg 160  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||| || ||||| ||||||||||||| |||| || ||||| ||||||   ||    
T  20765156 acccagttcggtgacaaacacacttactctgggggcgaccaagccaggaagaaagtccactagtgtagtccttattcta-agttctcaacaaactttccg 20765058  T
Q  161 tttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| |||  ||||||||||||||||||| | |||||||||||| |||||| ||||||||||    
T  20765057 tttacaactctagacctaggacctacccgtcttgacttcaacctaagaactcttagatctgag 20764995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 25782797 - 25782894
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctc 147  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||| ||||||| | ||| ||||||||||||    
T  25782797 tgagtttgttaacccagttcggtgacaaacacacctactctggaggctaccaagccagtaaggaaatccactagtgtagccattattctatagctctc 25782894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 21323407 - 21323275
Alignment:
Q  90 tgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttaca-ctaaagacctaggacctacccg 188  Q
    |||||||||||||   ||||||||||||||| ||||||||||||| |||| || | ||| |||||||||| |||||| ||  ||| |||||| ||| |||    
T  21323407 tgggggctaccaaatcaggaaggaaatccactagtgtagtccttattcta-agttatcaacaaactcctcatttacaactctagaactaggatctaaccg 21323309  T
Q  189 tatagacttcaacctaggaactcctagatctgag 222  Q
    ||| ||||||||||||||||||||||||||||||    
T  21323308 tattgacttcaacctaggaactcctagatctgag 21323275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 32449271 - 32449392
Alignment:
Q  85 tactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggaccta 184  Q
    |||||| ||||||||||| | ||||||||||||||  |||||| |||||| |  |||| |||||||||||||||||||| |||||| | |||||||||||    
T  32449271 tactctaggggctaccaaaccaggaaggaaatccattagtgtattccttatttaatagttctcagcaaactcctcgtttgcactaatgtcctaggaccta 32449370  T
Q  185 cccgtatagacttcaacctagg 206  Q
    ||||||  ||||| ||||||||    
T  32449371 cccgtactgactttaacctagg 32449392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 25948503 - 25948558
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggg 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25948503 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggg 25948558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 18152874 - 18152707
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||||||||| |||||||||||||||||| ||| ||||||||||  ||||||||||||||| || |||||||||  ||||  | ||||| |||||    
T  18152874 ttgttaacccagttcagtgacaaacacacctactatggaggctaccaaggcaggaaggaaatccactagcgtagtccttgttcta-cgttctcaacaaac 18152776  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  ||| || ||| |  || || |||||||| | |  ||||||||||||||||||||||||||||||    
T  18152775 tccaagttcacaacttataacataagacctacctgcactgacttcaacctaggaactcctagatctgag 18152707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 96 - 189
Target Start/End: Complemental strand, 13870493 - 13870399
Alignment:
Q  96 ctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgt 189  Q
    ||||||||| ||||||||||||||| ||||||||||||| || |||||||||| ||| ||| | |||||||||| | |||| |||||||||||||    
T  13870493 ctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcatcaagctcattgtttacactatatgaccgaggacctacccgt 13870399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 17870002 - 17869944
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggct 97  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17870002 aaaggacacagtgagtttgttgacccagttcggtgacaaacacacctactctaggggct 17869944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 17879754 - 17879696
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggct 97  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17879754 aaaggacacagtgagtttgttgacccagttcggtgacaaacacacctactctaggggct 17879696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 19894725 - 19894625
Alignment:
Q  119 acaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagat 217  Q
    |||||||||||||||| || |||||||||| |||| |||| ||||||| || | |||||||||||||||| ||||||||||||| |  ||||||||||||    
T  19894725 acaagtgtagtccttattcaatagctctcatcaaattccttgtttacattatatgacctaggacctaccc-tatagacttcaacttctgaactcctagat 19894627  T
Q  218 ct 219  Q
    ||    
T  19894626 ct 19894625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 12385309 - 12385261
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctac 87  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  12385309 aaagaacacagtgagtttgttggcccagttcgatgacaaacacacctac 12385261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 19100008 - 19100057
Alignment:
Q  172 gacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||    
T  19100008 gacctaggac-tacccgtatagacttcaacctaggaacttctacatctgag 19100057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 24561560 - 24561600
Alignment:
Q  170 aagacctaggacctacccgtatagacttcaacctaggaact 210  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  24561560 aagacctaggacctacccgtctagatttcaacctaggaact 24561600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 9e-79; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 4246010 - 4246194
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||     
T  4246010 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagacaggaaggaaatccactagtgtagtccttattca 4246109  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4246110 atagctctcagcaaactcctcgtttacactatatgacctaggacctacctgtatagacttcaacctaggaactcctagatctgag 4246194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 11668046 - 11667863
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| |||    
T  11668046 aaagaacacagtgagtttgttgacccagttcgatgagaaacacacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattct 11667947  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  11667946 atagctctcagcaaactcctcgtttacactaaagaccatggacctacccgtatagacttcaacctaggaactcctagatctgag 11667863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 26972584 - 26972399
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||| ||     
T  26972584 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgtagtccttattca 26972485  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagac-ttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26972484 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagactttcaacctaggaactcctagatctgag 26972399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 41 - 222
Target Start/End: Complemental strand, 17851554 - 17851373
Alignment:
Q  41 agaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctat 140  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| ||||||||||||| |||||    
T  17851554 agaacacagtgagtttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaagaaggaaatccactagtgtagtccttattctat 17851455  T
Q  141 agctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| || | |||||||||||||||||||||||||||    
T  17851454 agctctcagcaaactcctcgtttacactaaagacctaggacctagccgtctacatttcaacctaggaactcctagatctgag 17851373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 1973299 - 1973471
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||| ||||||||||||| ||||||||||||||    
T  1973299 tgagtttgttgacccagttcggtgacaaacactcctactctgggggataccaagtcaggaaggaaatccactagtgtagtccttattctatagctctcag 1973398  T
Q  150 caaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     ||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  1973399 aaaactcctcatttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgag 1973471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 20841448 - 20841265
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||| |  |||||||||||| ||||||||||||||| ||||||||||||| | |    
T  20841448 aaagaacacaatgagtttgttgaaatagttcggtgacaaacacacctactatatgggctaccaagccaggaaggaaatccactagtgtagtccttatttt 20841349  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  20841348 atagctcttagcaaactcctcgtttacactaaagacctaggacctacatgtacagacttcaacctaggaactcctagatctgag 20841265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 23478112 - 23477935
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  23478112 cacagtgagtttgttgacctagttcagtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagct 23478013  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||  || ||||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  23478012 ctcagcaaacaacttgtttacaataaagacctagaacctacccgtattgatttcaacctaggaactcctagatctgag 23477935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 12753049 - 12753219
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||| || |||||||||| |||||||||||||||     
T  12753049 agtttgttaacccagttcggtgagaaacacacctactctggaggctaccaagccaggaagtaaatccactagcgtagtccttattctatagctctcagcg 12753148  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||||||||||    
T  12753149 aactcctcgtttacactaaagacctaggacctacccatattgatttcaacctagaaactcctagatctgag 12753219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 39 - 219
Target Start/End: Original strand, 13165372 - 13165550
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||| ||||||||||| ||||||||||||||||||  ||||| ||||| ||||||||||||||||||||||||| ||||||||||||| ||     
T  13165372 aaagaacacaataagtttgttgactcagttcggtgacaaacac--ctactgtgggg-ctaccaagctaggaaggaaatccactagtgtagtccttattca 13165468  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
    ||||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||||| |||||||||||||||||    
T  13165469 atagctctcagcatactcctcgtttacagtatatgacctaggacctacccgtatagacttcaacataggaactcctagatct 13165550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 14745954 - 14745783
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||| ||||||||||||| || ||||||||||||    
T  14745954 gagtttgttgacccagctcggtgacaaacacaccaactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagc 14745855  T
Q  151 aaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| ||||||||||||| | ||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  14745854 aaactactcgtttacactatatgacata-gacctacccgtatagacttcaacctaggaactcttagatctgag 14745783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 17379790 - 17379623
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||| |  |||||||||||    
T  17379790 ttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcta-atttctcagcaaac 17379692  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||| |||  ||||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  17379691 tcctcgtttacaactctagacctaggacctacccgtcttgacttcaacctagaaactcctagatctgag 17379623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 17038236 - 17038404
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| ||||||||||||| |||   |||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  17038236 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctctagctctcagca 17038333  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||| |||||||||||| | | ||||||||||||||||||||||||||||||    
T  17038334 aactcctcgtttacactaaagacataggacctacccatcttgacttcaacctaggaactcctagatctgag 17038404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 17355998 - 17355831
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||| |||| |  |||||||||||    
T  17355998 ttgttaacccagttcggtgacaaacacacctactctgggggctaccaagcctggaaggaaatccaccagtgtagtccttattcta-atttctcagcaaac 17355900  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||| |||  | ||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  17355899 tcctcgtttacaactctacacctaggacctacccgtcttgacttcaacctaggaactcatagatctgag 17355831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 33062372 - 33062544
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    |||||||||| ||||||||||||| |||   |||||||||||||||||||||||| || |||||||||||| ||||||||||||| || |||||||| ||    
T  33062372 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccagaaaggaaatccactagtgtagtccttattcaatagctcttag 33062470  T
Q  150 caaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||| ||||| | |||||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  33062471 caaactcctcgtttgcactatatgacctaggacctacccttactgacttcaacctaggaactcctagatctgag 33062544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 40313400 - 40313224
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||| ||| |||    |||||||| |||||||||||||| ||||||||||||||| |||||||||| || || ||||||    
T  40313400 cacagtgagtttgttaacccagttcagtg-caacgttacctactcagggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 40313302  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| |||||| ||||||||||||| |||||  ||||||||||||||||||| || |||||||    
T  40313301 ctcagcaaactcctcgtttgcactaatgacctaggacctagccgtactgacttcaacctaggaactcatatatctgag 40313224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 17012019 - 17012161
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta-aagacctagg 179  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || | |||| |||||||||||||||||| ||||| | ||||||||    
T  17012019 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaacagctttcagcaaactcctcgtttgcactatatgacctagg 17012118  T
Q  180 acctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||| |||  ||||||||||||||||||||| ||||||||    
T  17012119 acctacctgtactgacttcaacctaggaactcctggatctgag 17012161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 45599471 - 45599330
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctagga 180  Q
    |||||||||| ||||||||||||| ||||||||||||||| | |||||||| || || |||| ||||| |||||||||| ||| |||||| |||||||||    
T  45599471 cacctactctcggggctaccaagccaggaaggaaatccactaatgtagtccgtattcaatagttctcaacaaactcctcatttgcactaatgacctagga 45599372  T
Q  181 cctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||  ||||||||||||||||||||||||||||||    
T  45599371 cctacccgtactgacttcaacctaggaactcctagatctgag 45599330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 51472260 - 51472093
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||||| ||| ||||||||||||| |||||||||||||||||| | | ||||||||||||| ||||||||||||| |||| || ||||| |||||    
T  51472260 ttgttaacccaattcagtgacaaacacacatactctgggggctaccaaaccaagaaggaaatccactagtgtagtccttattcta-agttctcatcaaac 51472162  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||| |||  ||||||||||||||||||| |  | |||||||||||||||||||||||||||    
T  51472161 tcctcgtttacaactctagacctaggacctacccgtctttatttcaacctaggaactcctagatctgag 51472093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 47941454 - 47941340
Alignment:
Q  108 gaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctagga 207  Q
    ||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||| |    
T  47941454 gaaggaaatccactagtgtagtccttattctatagctcttagcaaactcctcgtttacactaaagacataggacctacccgtctagatttcaacctagta 47941355  T
Q  208 actcctagatctgag 222  Q
    ||||||| |||||||    
T  47941354 actcctaaatctgag 47941340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 15804282 - 15804112
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||||| |||| ||| ||||||||||||| ||||  | |||||||    
T  15804282 gagtttgttaacccagttcagtgacaaacacacctactatgggggctaccaagccaggaagaaaattcactagtgtagtccttattctaatgttctcagc 15804183  T
Q  151 aaactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  || ||||||| ||  |||||||||||||||||||||| || |||||| || |||||||||||||||||    
T  15804182 aaa--ccacgtttacaacacaagacctaggacctacccgtattgatttcaacttaagaactcctagatctgag 15804112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 222
Target Start/End: Complemental strand, 18390273 - 18390105
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| || ||  |||| || ||||||||||    
T  18390273 tttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgtaatcattgttcta-agttctcagcaaa 18390175  T
Q  154 ctcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||   |||||| ||| |  |||||||||| |||||||| ||||||||| ||| ||||||||||||||||    
T  18390174 ctcgaagtttacaacttatcacctaggaccaacccgtattgacttcaacgtagaaactcctagatctgag 18390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 20859726 - 20859645
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccac 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20859726 aaagaacacaatgattttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccac 20859645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 8281911 - 8282078
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||| ||||||||||||||||||||||||| || ||| ||||||| |||||||||| |||| | ||||||||||| | || || ||||| |||||    
T  8281911 ttgttaacctagttcggtgacaaacacacctactccggaggcgaccaagccaggaaggaaacccactattgtagtccttattgta-agttctcaacaaac 8282009  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||| |||||| |||  ||||| ||||||||||||| |  ||||||||||||||| |||||||||||||    
T  8282010 tccttgtttacaactctagaccaaggacctacccgtcttaacttcaacctaggaattcctagatctgag 8282078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 52436997 - 52436820
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||||| ||||||| ||  |||||| |||||||| |||  |||||||| || ||||||    
T  52436997 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctggaggctaccgagtcaggaagaaaatccactagtacagtccttattcaatagct 52436899  T
Q  145 ctcagcaaactcctcgtttacactaaa-gacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     |||| ||||||||||||  ||||| | ||| ||||| |||||||||  ||||||||||||||||||||||||||||||    
T  52436898 ttcagtaaactcctcgttcgcactatatgacataggatctacccgtactgacttcaacctaggaactcctagatctgag 52436820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 222
Target Start/End: Complemental strand, 10340327 - 10340158
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||| |||  ||||||||||||||| | ||||||| ||| |||  || | |||| |    
T  10340327 agtttgttgacccagttcggtaacaagtacacctactctgggggctactaagtcaggaaggaaatccactattgtagtctttattcttaagttttcagta 10340228  T
Q  152 aactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||  ||  |||||| ||| | |||||||||||||||||| || | |||||||||||||||||||||||||||    
T  10340227 aa--ccatgtttacaacttacgacctaggacctacccgtctatatttcaacctaggaactcctagatctgag 10340158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 41330979 - 41330891
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtcctt 133  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||| ||| |||| |||||| |||||    
T  41330979 cacaaagagtttgttgacccagttcggtgacaaacacacctactttgggggctactaagccaggaagtaaaaccactagtgtaatcctt 41330891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 18379899 - 18379856
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggct 97  Q
    |||||| ||||||||||||||||||||||||||| || ||||||    
T  18379899 tttgttaacccagttcggtgacaaacacacctacactaggggct 18379856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 8902055 - 8902121
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccac 120  Q
    |||||| || ||||| |||||||||||||||| ||||| | |||||||||  ||||||||| |||||    
T  8902055 tttgttaactcagtttggtgacaaacacacctgctctgagagctaccaagtcaggaaggaattccac 8902121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 4e-78; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 24091932 - 24092115
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| |||    
T  24091932 aaagaacacagtgagtttgttgacctagttcggtgacaaacacacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattct 24092031  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  24092032 acagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgag 24092115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 11221451 - 11221273
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||     ||||||||||||| |||    
T  11221451 aaagaacacagtgagtttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccaggaaggaaat-----agtgtagtccttattct 11221357  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11221356 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 11221273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 33977044 - 33977216
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||  || |||||||||||| ||||||||||||| ||||||||||||||    
T  33977044 tgagtttgttgacccagttcggtaacaaacgcacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagctctcag 33977143  T
Q  150 caaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||    
T  33977144 caaactccttgtttacactaaagacctagaacctacccgtatatacttcaatctaggaactcctagatctgag 33977216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 23541595 - 23541411
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |  |||||||||||||| |||||||| |||| ||     
T  23541595 aaagaacacaatgagtttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccgggaaggaaatccactagtgtagtacttattca 23541496  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||  ||||||||||| |  ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  23541495 atagctctcagcaaactcgccgtttacactatattacctaggacctactcgtatagaattcaacctaggaactcctagatctgag 23541411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 9996487 - 9996657
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| |||||||||||||||||||||||||||||||| | ||||||||  ||||| ||||||||| | ||||||||||| ||||||||||||||||    
T  9996487 agtttgttaacccagttcggtgacaaacacacctactctggagactaccaagtcaggaatgaaatccactattgtagtccttattctatagctctcagca 9996586  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  9996587 aactcctcatttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctaggtctgag 9996657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 222
Target Start/End: Complemental strand, 13660514 - 13660373
Alignment:
Q  80 acacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctagg 179  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||| |||||||||| ||    
T  13660514 acacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggg 13660416  T
Q  180 acctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13660415 acctacccgtatagacttcaacctaggaactcctagatctgag 13660373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 80 - 222
Target Start/End: Complemental strand, 13719157 - 13719016
Alignment:
Q  80 acacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctagg 179  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||| ||| |||| ||||||||||||||||||||||||| |||||||||| ||    
T  13719157 acacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggg 13719059  T
Q  180 acctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  13719058 acctacccgtatagacttcaacctaggaactcctagatctgag 13719016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 74 - 222
Target Start/End: Original strand, 22476240 - 22476389
Alignment:
Q  74 acaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta-aag 172  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| | |    
T  22476240 acaaacacacctactttgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatg 22476339  T
Q  173 acctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  22476340 acctaggacctacccatatagacttcaacctaggaactcctagatttgag 22476389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 20255054 - 20254877
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||| ||||| ||||||| |||| || ||||||||    
T  20255054 agtttgttgacccagttcggtgacaaacacatgtactatgggggctaccaagctaggaaggaaatccactagtgtggtccttattctaaagttctcagca 20254955  T
Q  152 aactcctcgtttac-actaaagacc-------taggacctacccgtatagacttcaacctaggaactcctagatctga 221  Q
    |||||||||||||| ||| ||||||       |||||||||||||| |||||||||||||||||||||||||||||||    
T  20254954 aactcctcgtttacaactgaagacctaggacgtaggacctacccgtctagacttcaacctaggaactcctagatctga 20254877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 8726861 - 8727002
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctagga 180  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||| || || ||||||||||||||||||||||||| |||||| |||||||||    
T  8726861 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccatattcaatagctctcagcaaactcctcgtttgcactaacgacctagga 8726960  T
Q  181 cctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||  |||||||||||| |||||||||||||||||    
T  8726961 cctacccgtaatgacttcaacctatgaactcctagatctgag 8727002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 25240391 - 25240562
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    |||||||||| |||||||||||||||||||||||||||   |||||||||||| | ||||||||||||||| ||||||||||||| || | |||||||||    
T  25240391 tgagtttgtttacccagttcggtgacaaacacacctaccaagggggctaccaaaccaggaaggaaatccaccagtgtagtccttattcaaaagctctcag 25240490  T
Q  150 caaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctg 220  Q
    |||||||||  ||||||| | | |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  25240491 caaactccttctttacactttacgacctaggacctacccgtctagacttcaacctaagaactcctagatctg 25240562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 22485118 - 22485292
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||         ||| ||| |||||||| ||||||||||||| ||     
T  22485118 aaagaacacaatgagtttgttgacccagttcggtgacaaacacaactactctggggg---------tag-aagaaaatccactagtgtagtccttattca 22485207  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||| | |||||||||  || ||||||||||||||||||| |||||||||||||||||    
T  22485208 atagctctcagcaaactcctcgtttacactatatgacctaggaattatccgtatagacttcaacctaagaactcctagatctgag 22485292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 33466331 - 33466161
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| | ||||||||||| |||   |||||||||||||||||||||||| |||||| |||||||| ||||||||||||| || | ||||||||||    
T  33466331 gagtttgttaatccagttcggtg-caacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaaaagctctcagc 33466233  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| ||||||| |||||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  33466232 aaacttctcgtttgcactaatgacctaggacctaccggtactgacttcaacctaggaactcctagatctgag 33466161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 17880917 - 17880740
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctggggg-ctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||| ||||||||| | ||||||||||||| |||||||| |||| || |||||    
T  17880917 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctggggggctaccaagccaagaaggaaatccactagtgtagttcttattcaatagc 17880819  T
Q  144 tctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||| |||||| ||||||||| | |||||||  ||||||||||||||||||||||||||||||    
T  17880818 tctcagcaaactcctcgtttgcactaatgacctaggaacgacccgtactgacttcaacctaggaactcctagatctgag 17880740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 39080982 - 39081123
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctagga 180  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || |||||||||| |||||||||| ||| |||||| ||||||| |    
T  39080982 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttgcactaatgacctagaa 39081081  T
Q  181 cctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  39081082 cctacccgtactgacttcaacctaggaactactagatctgag 39081123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 55 - 217
Target Start/End: Complemental strand, 12814760 - 12814598
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||| || |||||||||||    
T  12814760 ttgttaacccaatttggtgacaaacacacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcta-agttctcagcaaac 12814662  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagat 217  Q
    ||||||||||| |||  ||||||||||||||||||| | ||| ||||||||| |||||||||||    
T  12814661 tcctcgtttacaactgtagacctaggacctacccgtcttgacgtcaacctagaaactcctagat 12814598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 17279876 - 17280046
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||||||| |||   ||||||||||||||| |||||||| ||||||||||||||| |||||||| | || || |||||||| |||    
T  17279876 gagtttgttaacccagttcggtg-caacgtcacctactctgggggataccaagccaggaaggaaatccactagtgtagttcgtattcaatagctctaagc 17279974  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||| |||||| |||||||||||||||| ||  |||||||||||||||||| |||||||||||    
T  17279975 aaactcctcgtttgcactaatgacctaggacctacccatactgacttcaacctaggaacttctagatctgag 17280046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 37155668 - 37155526
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta-aagacctagg 179  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||| |||||| || ||||||||||||||||||||||||| ||||| | ||||||||    
T  37155668 cacctactctgggggctaccaagccaggaaggaaattcactagtgtaatccttattcaatagctctcagcaaactcctcgtttgcactatatgacctagg 37155569  T
Q  180 acctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||  |||||||||||||||||||| |||||||||    
T  37155568 acctacccgtactgacttcaacctaggaactccaagatctgag 37155526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 27925563 - 27925447
Alignment:
Q  106 aggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctag 205  Q
    ||||||||||||||| ||||||||||||| ||||||||||||| |||||||| | ||||||| |||||| |||||||||||||||||||||||| |||||    
T  27925563 aggaaggaaatccactagtgtagtccttattctatagctctcaacaaactccacatttacaccaaagacataggacctacccgtatagacttcatcctag 27925464  T
Q  206 gaactcctagatctgag 222  Q
    |||||||||||||||||    
T  27925463 gaactcctagatctgag 27925447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 22874206 - 22874324
Alignment:
Q  92 ggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtat 191  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || | ||||||||||||||||||| ||| |||||| |||||||||||||||||||     
T  22874206 ggggctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcatttgcactaatgacctaggacctacccgtac 22874305  T
Q  192 agacttcaacctaggaact 210  Q
     ||||||||||| ||||||    
T  22874306 tgacttcaacctgggaact 22874324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 45136176 - 45136273
Alignment:
Q  125 gtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||| ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45136176 gtagtcattattcgatagctctcagcaaactcctcatttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatatgag 45136273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 24384564 - 24384702
Alignment:
Q  67 ttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttac- 165  Q
    ||||||||||||||||| |||||||||||||||||||| |||||| |||||||| ||||||||||||| |||| || ||||||||||||||  ||||||     
T  24384564 ttcggtgacaaacacacgtactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcta-agttctcagcaaactccaagtttaca 24384662  T
Q  166 actaaagacctaggacctacccgtatagacttcaacctag 205  Q
    ||| |||||||||| ||||||||||  |||||||||||||    
T  24384663 acttaagacctagggcctacccgtagtgacttcaacctag 24384702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 1683966 - 1684133
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| ||||| ||||||| |||   |||||||||||| | ||||||||| |||| |||||||||| ||||||||||||| ||| || ||| |||||    
T  1683966 agtttgttaacccaattcggtg-caacgtcacctactctggcg-ctaccaagccagga-ggaaatccactagtgtagtccttattctctaactcccagca 1684062  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||| | ||||||| | |||||||||||| |||||||||| ||||||    
T  1684063 aactcctcgtttacactaaagacctaggtcatacccgtcttgacttcaacctaagaactcctagttctgag 1684133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 219
Target Start/End: Complemental strand, 24850565 - 24850436
Alignment:
Q  90 tgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttac-actaaagacctaggacctacccg 188  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| || | |||||||||||||||||||| |||  |||||||||| ||||||     
T  24850565 tgggggctaccaagctaggaaggaaatccactagtgtagtccttattcta-agttatcagcaaactcctcgtttacaactctagacctaggagctaccca 24850467  T
Q  189 tatagacttcaacctaggaactcctagatct 219  Q
    ||| || ||||| ||||||||||||||||||    
T  24850466 tattgatttcaatctaggaactcctagatct 24850436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 45133639 - 45133729
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagt 129  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  45133639 aaaggacacattgagtttgttgacccagttcggtgacaaacacacctactctgggggctatcaagccaggaaggaaatccactagtgtagt 45133729  T

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Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 222
Target Start/End: Complemental strand, 23864602 - 23864468
Alignment:
Q  88 tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaa-agacctaggacctacc 186  Q
    |||||||| |||||||  |||||| |||||||| ||||||||||||| |||| || ||||||||||||||||| ||||| |   ||||||||||||||||    
T  23864602 tctgggggataccaagtcaggaagaaaatccactagtgtagtccttattcta-agttctcagcaaactcctcgcttacaattctagacctaggacctacc 23864504  T
Q  187 cgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| | ||||||||||||||||||||||||||||||    
T  23864503 cgttttgacttcaacctaggaactcctagatctgag 23864468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 39 - 165
Target Start/End: Original strand, 33961736 - 33961862
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||  ||||||||||||||||||||||| |||||| ||||||||||||||||||||| |  |||||||||||| || |||||||||| || |||    
T  33961736 aaagaacactgtgagtttgttgacccagttcggtaacaaactcacctactctgggggctaccacgtcaggaaggaaatcaactagtgtagtccgtattct 33961835  T
Q  139 atagctctcagcaaactcctcgtttac 165  Q
    ||||  |||| ||||||||| ||||||    
T  33961836 ataggactcaacaaactccttgtttac 33961862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 222
Target Start/End: Complemental strand, 1562537 - 1562368
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaa 152  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||  | || || || ||||||    
T  1562537 gtttgttaacccagttcggcgacaaacacacctactttgggggctaccaagccaggaaggaaatccactagtgtagtccttgtttta-agttcccagcaa 1562439  T
Q  153 actcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | | |   ||||| ||| |  ||||||||||||||||||  ||||||||||||  |||||||| |||||||    
T  1562438 atttcaaatttacaacttataacctaggacctacccgtactgacttcaacctaaaaactcctacatctgag 1562368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 23249716 - 23249893
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||| ||||||||| ||||| ||||||| |||   |||||||||||||||||||||||| | ||||||||||||| ||||||||||||| | ||    |    
T  23249716 cacaacgagtttgttaacccaattcggtg-caacgtcacctactctgggggctaccaagccaagaaggaaatccactagtgtagtccttattataagttt 23249814  T
Q  145 ctcagcaaactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     ||| ||||||| | |||| | |||  |||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  23249815 atcaacaaactcattgtttgcaactctagacctaggaccaacctgtattgacttcaacctaggaactcctagatctgag 23249893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 12240228 - 12240305
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtcc 131  Q
    |||||| ||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||| | ||||||||||    
T  12240228 tttgttaacccagttcggtgacaaacacacctactccggaggctaccaaaccaggaaggaaatccgctagtgtagtcc 12240305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 12377039 - 12376962
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtcct 132  Q
    ||||||| |||||||||||| |||||||||| |||| || || ||||||||| |||||||||||||||||||||||||||    
T  12377039 gtttgttaacccagttcggtaacaaacacacatactatgtgg-ctaccaagc-aggaaggaaatccacaagtgtagtcct 12376962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 18753875 - 18753954
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtcctta 134  Q
    ||||| |||||||||| ||||||| |||||||||||  |||||| ||||| | ||||||||| ||  |||||||||||||    
T  18753875 ttgttaacccagttcgatgacaaatacacctactctaagggctatcaagccaagaaggaaatacagtagtgtagtcctta 18753954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 22472759 - 22472798
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaa 78  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  22472759 aaagaacacaatgagtatgttgacccagttcggtgacaaa 22472798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 222
Target Start/End: Original strand, 33961864 - 33961899
Alignment:
Q  187 cgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||| |||||||||||||||||||||||||||||    
T  33961864 cgtatatacttcaacctaggaactcctagatctgag 33961899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 43 - 222
Target Start/End: Original strand, 36984 - 37164
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| || ||||    
T  36984 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatag 37083  T
Q  143 ctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37084 ctctcagcaaactcctcgtttacaccatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 37164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 23758600 - 23758784
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||     
T  23758600 aaagaacacaatgagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattca 23758699  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||| ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23758700 atagttctcaacaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 23758784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 24790343 - 24790159
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| || |||||||||| ||     
T  24790343 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagagtagtccttattca 24790244  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24790243 atatctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 24790159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 12910464 - 12910648
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||     
T  12910464 aaagaacacagtgagtttgttgacccagttcggtgacaaacatacctactctgggggctaccaagccaggaaggaaatccacaagtgtagtccttattca 12910563  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||| ||||||||||| |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12910564 atagctttcagcaaactcgtcgtttacactatatggcctaggacctacccgtatagacttcaacctaggaactcctagatctgag 12910648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 36398979 - 36398795
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||     
T  36398979 aaagaacgcaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattca 36398880  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | ||||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36398879 aaagctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgag 36398795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 19466696 - 19466524
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  19466696 tgagtttcttaacccagttcggtgataaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcag 19466597  T
Q  150 caaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     ||||||||| |||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  19466596 aaaactcctcatttacactaaagacctaggacctacccgtattaatttcaacctaggaactcctagatctgag 19466524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 22610867 - 22611051
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    ||||  ||||||  ||||||||||||||| ||||||||||||| ||     
T  22610867 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctacaaaaggggaaaccaagaaaggaaggaaatccactagtgtagtccttattca 22610966  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22610967 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 22611051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 88 - 222
Target Start/End: Complemental strand, 26860432 - 26860297
Alignment:
Q  88 tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta-aagacctaggacctacc 186  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||| | |||||||||||||||    
T  26860432 tctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacc 26860333  T
Q  187 cgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||| |||||||||||||||||||||||||||    
T  26860332 cgtatagatttcaacctaggaactcctagatctgag 26860297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 21530366 - 21530542
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||| ||||||||| | ||||||||||||||||||  |||||||| ||||||||||||| | ||||||||||||| |||||||| |||| |||||||||    
T  21530366 cacaacgagtttgtttatccagttcggtgacaaacatgcctactctaggggctaccaagccaagaaggaaatccactagtgtagttcttattctatagct 21530465  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||| ||||||||||| |||||||||||||||||| || ||| || |||||| |||||||||||| |||||||    
T  21530466 ctcagcaaattcctcgtttacgctaaagacctaggaccta-ccatattgatttcaacttaggaactcctaaatctgag 21530542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 21250376 - 21250199
Alignment:
Q  45 cacaatgagtttgttgaccc-agttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||| | || ||     
T  21250376 cacagtgagtttgttgaccccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccgttagtgtagtcgttattttaaagt 21250277  T
Q  144 tctcagcaaactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||| |||  || ||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  21250276 tctcagtaaa--ccacgtttacaacttaagacctaggacctacccgtctagacttcaacctaggatctcctagatctgag 21250199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 83 - 222
Target Start/End: Original strand, 29566031 - 29566169
Alignment:
Q  83 cctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacc 182  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||| |||||| |||||||||||    
T  29566031 cctactctgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaatgacctaggacc 29566129  T
Q  183 tacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||  ||||||||||||| ||||||||||||||||    
T  29566130 tacccgtactgacttcaacctagaaactcctagatctgag 29566169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 18765662 - 18765834
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    |||||||||| ||||||||||||| |||   |||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || |||||||||||    
T  18765662 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcag 18765760  T
Q  150 caaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     ||||||||||||| ||||| | |||||||||| ||||||||   |||||||||||||||||| ||||||||||    
T  18765761 taaactcctcgtttgcactatatgacctaggacttacccgtactaacttcaacctaggaactcgtagatctgag 18765834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 53 - 220
Target Start/End: Complemental strand, 24317981 - 24317813
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||||| |||| || ||||||||    
T  24317981 gtttgttaacccaattcggtgacaaacacacctacatctgggggttaccaagccaggaaggaaatccactagtgtagtccttattcta-agttctcagca 24317883  T
Q  152 aactcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctg 220  Q
    ||||||| ||||| | ||  ||||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  24317882 aactcctggtttataactctagacctaggacctacccatattgacttcaacctaggaagtcctagatctg 24317813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 31587467 - 31587630
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||| ||||||||||||| |||| || |||||||||||    
T  31587467 ttgttaacccagttcggtgacaaacacacctactctggag-ctaccaagccaggaaggaaatccactagtgtagtccttattcta-agttctcagcaaac 31587564  T
Q  155 tcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
    |||  ||||||| ||  |||||||||||||||  |||| |||||||||||||||||||||||||||    
T  31587565 tccaagtttacaactctagacctaggacctacatgtattgacttcaacctaggaactcctagatct 31587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 53 - 222
Target Start/End: Complemental strand, 24317361 - 24317190
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctac-tctggggg-ctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||| || |||||||||||||||||||||||| |||||||| |||||||| ||  |||||||||||| ||||||||||||| |||| || ||||| |    
T  24317361 gtttgttaactcagttcggtgacaaacacacctacatctggggggctaccaagttataaaggaaatccactagtgtagtccttattcta-agttctcaac 24317263  T
Q  151 aaactcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||| ||  ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  24317262 aaactcctcgtttacaactctagacctaggacctacccgtattgacttcaaactaggaactcctagatctgag 24317190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 13315139 - 13314967
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctggggg-ctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctca 148  Q
    |||||||||| ||||||||||||| |||   |||||||| |||||| |||| |||| |||||| |||||||| ||||||||||||| || | ||||||||    
T  13315139 tgagtttgttaacccagttcggtg-caatgtcacctactatggggggctactaagccaggaagaaaatccactagtgtagtccttattcaagagctctca 13315041  T
Q  149 gcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||| |||||| |||||||||||||||||||  |||||||| | |||||||||||||||||||    
T  13315040 gcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaatcaaggaactcctagatctgag 13314967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 27111071 - 27111237
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||| |||| || |||||||||||    
T  27111071 ttgttaacccagatcggtgacaaacacacctactctgggg-ctaccaagccaggaaggaagtccactagtgtagtccttattcta-agttctcagcaaac 27111168  T
Q  155 tcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | |  ||||||| || |||| ||||||||||||||||   |||||||||||||||||||||||||||||    
T  27111169 ttcaagtttacaacttaagaactaggacctacccgtacttacttcaacctaggaactcctagatctgag 27111237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 222
Target Start/End: Complemental strand, 20649727 - 20649558
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaa 152  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| |||  ||||||||||||||| ||||||||||||  |||| || ||| |||||    
T  20649727 gtttgttaacccagttcggggacaaacacacctactctaggggctacaaagtcaggaaggaaatccactagtgtagtccttgttcta-agttcttagcaa 20649629  T
Q  153 actcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||  |||||| ||| |  ||||||||||||||||||  | ||||||||||||||||||||||| ||||    
T  20649628 actccaagtttacaacttatcacctaggacctacccgtactggcttcaacctaggaactcctagatttgag 20649558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 25347199 - 25347348
Alignment:
Q  70 ggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttac-act 168  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| |||| ||||||||||||| |||| || ||| ||||||||||  |||||| |||    
T  25347199 ggtgacaaacacacctactctgggggctaccaagccagaaaggaaacccactagtgtagtccttattcta-agttcttagcaaactccaagtttacaact 25347297  T
Q  169 aaagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
     |||| ||||||||||||||||   ||||||||||| |||||||| |||||    
T  25347298 taagaactaggacctacccgtactaacttcaacctatgaactcctcgatct 25347348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 53 - 222
Target Start/End: Complemental strand, 20475446 - 20475277
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaa 152  Q
    ||||||| ||||| ||||||||||||||  ||| || ||||||| ||||||| ||||| ||||| ||| |||||||||||   ||| ||| |||||||||    
T  20475446 gtttgttaacccaattcggtgacaaacatgcctgctttgggggcaaccaagccaggaaagaaattcactagtgtagtcctagttct-tagttctcagcaa 20475348  T
Q  153 actcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||  ||||||| || |  ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  20475347 actccaagtttacaacttatcacctaggacctacccgtattgacttcaacctaggagctcctagatctgag 20475277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 222
Target Start/End: Complemental strand, 20476720 - 20476578
Alignment:
Q  80 acacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttaca-ctaaagacctag 178  Q
    |||| |||| ||||||||||||||||||||||||||| |||  ||||||||||   ||| ||| ||||||||||||||  ||||||| || |  ||||||    
T  20476720 acacgtactttgggggctaccaagctaggaaggaaattcactggtgtagtcctagttct-tagttctcagcaaactccaagtttacaacttatcacctag 20476622  T
Q  179 gacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||    
T  20476621 gacctacccgtattgacttcaacctagaaactcttagatctgag 20476578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 12952462 - 12952630
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||||||  ||||||||||||||| |||||||||||   |||| || | ||||||||    
T  12952462 tttgttaacccagttcggtgacaaacacacctactatggaggctaccaagtcaggaaggaaatccactagtgtagtcctagttcta-agttatcagcaaa 12952560  T
Q  154 ctcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||  |||||| ||| |  | ||||   |||||||||  ||||||||||||||| |||||||| |||||    
T  12952561 ctccaagtttacaacttatcatctagacactacccgtactgacttcaacctaggagctcctagacctgag 12952630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 222
Target Start/End: Complemental strand, 19198431 - 19198280
Alignment:
Q  70 ggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtt-tacact 168  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||  |||| || ||||||||||||||  |||  | |||    
T  19198431 ggtgacaaacacacctactctgggg-ctatcaagccaggaaggaaatccactagtgtagtccttgttcta-agttctcagcaaactccgagttccaaact 19198334  T
Q  169 aaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     |  ||||| |||||||||||   ||||||||||||||||| ||||||||||||    
T  19198333 tataacctaagacctacccgttctgacttcaacctaggaacgcctagatctgag 19198280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 222
Target Start/End: Original strand, 27107556 - 27107668
Alignment:
Q  110 aggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaa 208  Q
    ||||||||||| | ||||||||||| |||| || ||||||||||||||  ||||||| || |||||||||||||||||||||  ||||||||||||||||    
T  27107556 aggaaatccactattgtagtccttattcta-agttctcagcaaactccaagtttacaacttaagacctaggacctacccgtactgacttcaacctaggaa 27107654  T
Q  209 ctcctagatctgag 222  Q
    ||||||||| ||||    
T  27107655 ctcctagatttgag 27107668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 82 - 168
Target Start/End: Original strand, 15328326 - 15328412
Alignment:
Q  82 acctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacact 168  Q
    ||||||||||||||||||||||| | ||||||||||||  ||||||||||||| || | |||||| |||||||||||| ||||||||    
T  15328326 acctactctgggggctaccaagccaagaaggaaatccattagtgtagtccttattcaaaagctctaagcaaactcctcatttacact 15328412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 23801969 - 23801865
Alignment:
Q  61 acccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcg 160  Q
    |||||||||||||| |||||||| ||||  |||||||||||||| ||||| ||||||||| |  |||||||||| |||| || ||||| |||||||||||    
T  23801969 acccagttcggtgagaaacacacatacttggggggctaccaagcaaggaatgaaatccactaaagtagtccttattcta-agttctcaccaaactcctcg 23801871  T
Q  161 tttaca 166  Q
    ||||||    
T  23801870 tttaca 23801865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 24283688 - 24283596
Alignment:
Q  64 cagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcc 157  Q
    ||||||||||||||||||||||| ||||||||||||||||  |||||||||||| || |||||||||||   ||||| | ||||||||||||||    
T  24283688 cagttcggtgacaaacacacctattctgggggctaccaagtcaggaaggaaatctactagtgtagtcctagttctat-gttctcagcaaactcc 24283596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 22582387 - 22582497
Alignment:
Q  38 aaaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactc 137  Q
    |||| ||||||  |||||||||||| ||||||| |||||||||||||||||   || |||||||||| |||||| |||| ||| ||||||||||||| ||    
T  22582387 aaaaaaacacagagagtttgttgactcagttcgatgacaaacacacctactacaggagctaccaagcaaggaagaaaatacactagtgtagtccttattc 22582486  T
Q  138 tatagctctca 148  Q
    || || |||||    
T  22582487 taaagttctca 22582497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 9e-76; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 30605875 - 30605692
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||||||| |||    
T  30605875 aaagaacacagtgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaatccaggaaggaaatccactagtgcagtccttattct 30605776  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||||||||||||||||||||    
T  30605775 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccatattgatttcaatctaggaactcctagatctgag 30605692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 43 - 222
Target Start/End: Complemental strand, 22404942 - 22404762
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||| ||| ||||||||| || ||||    
T  22404942 aacacaatgagtttgttgacccagttcggtgacaaacacacctgctctaggggctaccaagccaggaaggaaatccactagtatagtccttattcaatag 22404843  T
Q  143 ctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22404842 ctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 22404762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 43 - 222
Target Start/End: Complemental strand, 26329394 - 26329215
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||| | |||||||||| |||||||||||||||  |||||||||||| |||||||    
T  26329394 aacacagtgagtttgttgacccagttcggtgataaacacacctactctgtgagctaccaagccaggaaggaaatccactggtgtagtccttattctatag 26329295  T
Q  143 ctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  26329294 ctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgag 26329215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 26036796 - 26036968
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||||    
T  26036796 tgagtttgttgacccagttcggtggaaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgttgtccttattctatagctctcag 26036895  T
Q  150 caaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  26036896 caaactcatcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaacttgtagatctgag 26036968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 23623852 - 23624035
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| ||| |||    
T  23623852 aaagaacacaatgagtttgttgacctatttcggtgacaaacacacctactctgggggctactaacctaggaaggaaatccactagtgtagtcgttattct 23623951  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| || |||||||||||||||| ||||| ||||    
T  23623952 atagctctcagcaaactcctcatttacactaaatacctaggacctacccgtattgatttcaacctaggaactcttagatttgag 23624035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 24189837 - 24190021
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||  |||||||||| ||| ||||||||| ||| ||     
T  24189837 aaagaacacagtgagtttgttgacctagttcggtgacaaacacacatactctgggggctaccaagccgggaaggaaattcactagtgtagtctttattca 24189936  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24189937 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcatagatctgag 24190021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 23420740 - 23420562
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||| || ||||||    
T  23420740 cacaatgagtttgctgacccagttcggtgacaaatacacctactctaagggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagct 23420641  T
Q  145 ctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  23420640 ctcagcaaactcctcatttacactatatgacctaggacctacccgtatagacttcaacctaggaactgttagatctgag 23420562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 13338567 - 13338749
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| |||||| |||||| |||    
T  13338567 aaagaacacagtgagtttgttaacccagttcggtgacaaacacacatactctgggg-ctaccaagccaggaaggaaatccactagtgtaatccttattct 13338665  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| ||||||||||||||||||||||||||||||||||||||| |||| |||| || ||| |||||||||||||||||||||||    
T  13338666 ataactctcagcaaactcctcgtttacactaaagacctaggacataccggtattgatttctacctaggaactcctagatctgag 13338749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 13735153 - 13734974
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||||||||  ||||||||||||| || | |||    
T  13735153 acacagtgagtttgttgacccacttcggtgacaaacacacctactctgggggttaccaagtcaggaaggaaatccattagtgtagtccttattcaaaagc 13735054  T
Q  144 tctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13735053 tctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgag 13734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 18221085 - 18221268
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| | ||||||||||||| ||||||||||||| ||     
T  18221085 aaagaacaagatgagtttgttgatccagttcggtgacaaacacacctactttggggtctaccaagccaagaaggaaatccactagtgtagtccttattcc 18221184  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||| |||||| |||||||||||||||||||||||| ||||| |||| || |||||||||||||||||||||||||||    
T  18221185 atagctctcaccaaacttctcgtttacactaaagacctaggagctaccagtattgagttcaacctaggaactcctagatctgag 18221268  T

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Target: chr5; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 13942166 - 13941998
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||| || |||||||||||    
T  13942166 ttgttaacctagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaac 13942067  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||| ||| || ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  13942066 tcctcgtttacaacttaaaacctaggacctacccgtctacacttcaacctaggaactcctagatctgag 13941998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 7898093 - 7897916
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    ||||| |||||||||| ||||||||||||| |||   |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| || |||||    
T  7898093 acacagtgagtttgttaacccagttcggtg-caacgtcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagc 7897995  T
Q  144 tctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  7897994 tctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcttagatctgag 7897916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 20714910 - 20714737
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||  ||| ||||||||||| ||||||||||||| ||||  | ||||||    
T  20714910 tgagtttgttgacctagttcggtgacaaacacacctactctgagggctaccaagtcaggtaggaaatccactagtgtagtccttattctaatgttctcag 20714811  T
Q  150 caaactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||| ||  |||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  20714810 caaactcctcgtttacaacacaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgag 20714737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 20741079 - 20740938
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctagga 180  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  20741079 cacctactctgggggctaccaagcgaggagggaaatccactagtgtagtccttattctctagctctcagcaaactcctcgtttacactaaagacctagga 20740980  T
Q  181 cctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||| |||| | ||||||||||||||||||||||||||||||    
T  20740979 cctatccgtcttgacttcaacctaggaactcctagatctgag 20740938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 17920961 - 17920785
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||| ||||||||||||| ||||||||||||||| |||||||||| || || | ||||    
T  17920961 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaaaagct 17920863  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  17920862 ctcagcaaactcctcgtttgcacttatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 17920785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 25105605 - 25105447
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||| ||||||||||||||||||||||| | ||||||| || ||||||||||||  ||||||||||||||| ||||||||||||| ||     
T  25105605 aaagaacacagtgagcttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattca 25105506  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagact 196  Q
    |||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  25105505 atagctttcagcaaactcctcgtttacactatatgacctaggacctacccgtatagact 25105447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 39 - 196
Target Start/End: Complemental strand, 25164698 - 25164540
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||| ||||||||||||||||||||||| | ||||||| || ||||||||||||  ||||||||||||||| ||||||||||||| ||     
T  25164698 aaagaacacagtgagcttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattca 25164599  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagact 196  Q
    |||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  25164598 atagctttcagcaaactcctcgtttacactatatgacctaggacctacccgtatagact 25164540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 20845966 - 20845795
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||||||| |||   |||||||| ||||||||||||||  ||||||||||||||| ||||||||||||| || | | ||||||||    
T  20845966 gagtttgttaacccagttcggtg-caacgtcacctactatgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaaaatctctcagc 20845868  T
Q  151 aaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20845867 aaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgag 20845795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 26183406 - 26183235
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||||||| |||   |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| || ||||||||||||    
T  26183406 gagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatacactagtgtagtccttattcaatagctctcagc 26183308  T
Q  151 aaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| ||||||| ||||| | ||||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  26183307 aaacttctcgtttgcactatatgacctagaacctacccgtactgacttcaacctaggaactcctagatctgag 26183235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 20498332 - 20498154
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    ||||| ||| |||||| ||||||||||||| |||   |||||||||||| ||||||||||  |||||||||||||||  |||||||||||| || |||||    
T  20498332 acacagtgaatttgttaacccagttcggtg-caacgtcacctactctggaggctaccaagtcaggaaggaaatccactcgtgtagtccttattcaatagc 20498234  T
Q  144 tctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  20498233 tctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 20498154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 22246478 - 22246356
Alignment:
Q  97 taccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagac 195  Q
    |||||||| ||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  22246478 taccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatttgacctaggacctacccgtatagac 22246379  T
Q  196 ttcaacctaggaactcctagatc 218  Q
    |||||||||||||||||||||||    
T  22246378 ttcaacctaggaactcctagatc 22246356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 106 - 219
Target Start/End: Complemental strand, 22252159 - 22252045
Alignment:
Q  106 aggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaa-gacctaggacctacccgtatagacttcaaccta 204  Q
    ||||||||||||||| ||||||||||||| || |||||||||| |||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  22252159 aggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttacactatatgacctaggacctacccgtatagacttcaaccta 22252060  T
Q  205 ggaactcctagatct 219  Q
    |||||||||||||||    
T  22252059 ggaactcctagatct 22252045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 22131005 - 22130877
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||||||||||||| |||   |||||||||||||||||||||||| |||| |||||||||| |||||| |||||| ||| |||||||||||    
T  22131005 gagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccagga-ggaaatccactagtgtaatccttattctctagctctcagc 22130908  T
Q  151 aaactcctcgtttacactaaagacctaggac 181  Q
    |||||||||||||||||||||||||||||||    
T  22130907 aaactcctcgtttacactaaagacctaggac 22130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 22184729 - 22184599
Alignment:
Q  92 ggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtat 191  Q
    ||||||||||||| ||||||||||||||  ||| ||||||  | |||| |||||||||||||||||||||||||||| |||||||| |||||||||| ||    
T  22184729 ggggctaccaagccaggaaggaaatccattagtctagtccgaattctaaagctctcagcaaactcctcgtttacacttaagacctatgacctacccgcat 22184630  T
Q  192 agacttcaacctaggaactcctagatctgag 222  Q
     || |||||||||||||||||||||||||||    
T  22184629 tgatttcaacctaggaactcctagatctgag 22184599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 51 - 222
Target Start/End: Complemental strand, 17661583 - 17661412
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||| ||||| ||||||  |||| || |||||||    
T  17661583 gagtttgttaacccagttcggtgacaaacacacctactatgggggctaccaagcctggaaggaaattcactagtgttgtccttgttcta-agttctcagc 17661485  T
Q  151 aaactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| |||   || || ||| |  ||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  17661484 aaattccaaattcacaacttataacctaggacctacccatattgacttcaacctaggaactcctagatctgag 17661412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 24117586 - 24117753
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||| ||||| ||||||||| ||||||||||||| | || |  |||||||||||    
T  24117586 ttgttaacccagttcggtgacaaacacgcctactctggtggctaccaagccaggaatgaaatccactagtgtagtccttattgta-aattctcagcaaac 24117684  T
Q  155 tcctc-gtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     |||| |||||| |||  ||||||||||||||||||||| ||||| |||||||||| | || ||||||||    
T  24117685 -cctcagtttacaacttcagacctaggacctacccgtattgactttaacctaggaatttcttgatctgag 24117753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 22979736 - 22979904
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaa-- 152  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||| |||||| |||| ||| ||||||||||||  |||| || |||||||||      
T  22979736 ttgttaacccagttcggtgacaaacacacctactat-ggggctaccaagcaaggaagcaaatacactagtgtagtccttgttcta-agttctcagcaaat 22979833  T
Q  153 actcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||  |||||| ||| |  ||||| ||| | ||||||| ||||||||||||||||||| ||||||||||    
T  22979834 actccaagtttacaacttatcacctaagacttgcccgtattgacttcaacctaggaactcttagatctgag 22979904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 20127026 - 20127150
Alignment:
Q  95 gctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttac-actaaagacctaggacctacccgtatag 193  Q
    |||||||| ||||||||||||||||| |||||| |||||| |||| || |||||||||||||||||||||| |||  | ||||||||||||||||| | |    
T  20127026 gctaccaatctaggaaggaaatccactagtgtaatccttattcta-agttctcagcaaactcctcgtttacaactctaaacctaggacctacccgtcttg 20127124  T
Q  194 acttcaacctaggaactcctagatct 219  Q
    ||||||||| | ||||| ||||||||    
T  20127125 acttcaacccatgaacttctagatct 20127150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 9422652 - 9422557
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtcctta 134  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| || |||||  ||||||||||||||| ||||| |||||||    
T  9422652 aaagaacacaatgagtttgttgacctagttcggtgacaaacacacctacatctggggact-ccaagtcaggaaggaaatccactagtgttgtcctta 9422557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 9522561 - 9522692
Alignment:
Q  90 tgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgt 189  Q
    ||||||||||||||  | ||||||||| ||| ||||||||||||| |||| || | ||| |||||||||| ||||||    |||||||||||||||||||    
T  9522561 tgggggctaccaagtcaagaaggaaattcactagtgtagtccttattcta-agttatcaacaaactcctcttttaca----agacctaggacctacccgt 9522655  T
Q  190 ata----gacttcaacctaggaactcctagatctgag 222  Q
    |||    ||||||||||||||||||||||||||||||    
T  9522656 atatattgacttcaacctaggaactcctagatctgag 9522692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 11756338 - 11756210
Alignment:
Q  90 tgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttaca-ctaaagacctaggacctacccg 188  Q
    ||||||||| ||||  ||||||||||| |||  ||||| || ||| |||| || ||||| |||| ||||| |||||| ||  ||||||||||||||||||    
T  11756338 tgggggctaacaaggcaggaaggaaattcacttgtgtattcattattcta-agttctcaacaaattcctcatttacaactctagacctaggacctacccg 11756240  T
Q  189 tatagacttcaacctaggaactcctagatc 218  Q
    ||| ||||||||||||||||||| ||||||    
T  11756239 tattgacttcaacctaggaactcttagatc 11756210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 11204712 - 11204777
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccac 120  Q
    |||||| ||||||||||||| |||   |||||||||||||||||||||||| |||||||||||||||    
T  11204712 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccac 11204777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 39 - 219
Target Start/End: Complemental strand, 15700496 - 15700315
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactct-gggggctaccaagctaggaaggaaatccacaagtgtagtccttactc 137  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||    
T  15700496 aaagaacacagtgagtttgttgacccagttcggtgacaaacacacctactcttgggggctaccaagccaggaaggaaatccactagtgtagtccttattc 15700397  T
Q  138 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||    
T  15700396 tatagctttcagcaaactcctcgtttacactaaagacctaggacctacccatattgatttcaacctaggaactcctagatct 15700315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 25116798 - 25116984
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggct--accaagctaggaaggaaatccacaagtgtagtccttact 136  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||||||||||| |    
T  25116798 aaagaacacaatgagtttattgacccagttcggtgacaaacacacctactctgggggctacaccaagccaggaaggaaatccactagtgtagtccttatt 25116897  T
Q  137 ctatagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | ||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25116898 caatagctctcagcaaacttctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 25116984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 10190861 - 10191045
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||     
T  10190861 aaagaaaacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaccagtgtagtccttattca 10190960  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||| |||||||||||||||||||||| | ||| |||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  10190961 atagctctaagcaaactcctcgtttacactatatgacataggacttactcgtatagacttcaacctagaaactcctagatctgag 10191045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 13399477 - 13399305
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| ||||||||||||| |||| |||||||||    
T  13399477 tgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaatccactagtgtagtccttattctaaagctctcag 13399378  T
Q  150 caaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  13399377 caaactcctcgtttacacttaagacttaggacctacccgtctagatttcaacctaggaactcctagatctgag 13399305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 10724234 - 10724417
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||| ||| |||||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||| ||||||||||||| |||    
T  10724234 aaagaatacagtgagtttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattct 10724333  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  10724334 atagctctcagcaaactcctcatttacattaaagacctaaaacctacccgtatagacttcaacctaggaactcctagatctgag 10724417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 10938003 - 10938186
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||| ||| |||||||||||||| |||||||||||||||||||||||| |||||||||| |||| ||||||||||| ||| ||||||||||||| |||    
T  10938003 aaagaatacagtgagtttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattct 10938102  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  10938103 atagctctcagcaaactcctcatttacattaaagacctaaaacctacccgtatagacttcaacctaggaactcctagatctgag 10938186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 39 - 221
Target Start/End: Complemental strand, 23400373 - 23400196
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||      |||||||||||| ||||||||||||||| ||||||||||||| ||     
T  23400373 aaagaacacaatgagtttgttgacctagttcggtgacaaacacaccta------gggctaccaagccaggaaggaaatccactagtgtagtccttattca 23400280  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 221  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23400279 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 23400196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 43 - 214
Target Start/End: Original strand, 28019283 - 28019455
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||| ||||||||||||| || ||||    
T  28019283 aacacaatgagtttgttgacccagttcggtgacaaacacacatgctctgggggctaccaagccaagaaggaaatccactagtgtagtccttattcaatag 28019382  T
Q  143 ctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactccta 214  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||    
T  28019383 ctctcagcaaactcctcgtttacactatatgacctaggacatacccgtatagacttcaacctaggaactccta 28019455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 9068933 - 9069103
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||    
T  9068933 agtttgttaacccagttcggtaacaaacacacctactctggaggctaccaagcgaggaaggaaatccactagtgtagtccttattctattgctctcagca 9069032  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||||||||||||||    
T  9069033 aactcctcgtttacactaaagatctaggacctacccgtattgatttcaatctaggaactcctagatctgag 9069103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 39 - 219
Target Start/End: Original strand, 16383865 - 16384046
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| ||     
T  16383865 aaagaacacaatgagattgttgacctagttcggtgacaaacacacctactctgggggcttccaagccaggaaggaaatccactagtgtagtccttattca 16383964  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
    |||||||||| |||||||||||||||||||| | ||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  16383965 atagctctcaacaaactcctcgtttacactatatgacctaggacctacccgtattaacttcaacctatgaactcctagatct 16384046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 39 - 215
Target Start/End: Complemental strand, 33899173 - 33898996
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||| ||||||||  |||||||||| | ||     
T  33899173 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaagaaaatccactggtgtagtcctcattca 33899074  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctag 215  Q
    |||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  33899073 atagctcttagcaaacttctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctag 33898996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 15162667 - 15162489
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| | | ||||||||||||| ||||||||||||| |||||| |    
T  15162667 acacaataagtttgttgacctagttcggtgacaaacacacctactctgggggctgccaacccaagaaggaaatccactagtgtagtccttattctataac 15162568  T
Q  144 tctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| ||||||| |||||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||| ||||    
T  15162567 tctcaacaaactcttcgtttacactaaagaccgagaacctacccgtataaacttcaacctaggaactcctcgatttgag 15162489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 33745951 - 33746121
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| || ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| |    
T  33745951 agtttgttaacacagttcggtgacaaaaacacctactatggaggctaccaagctaggaaggaaatccactagtgtagtccttattttatagctctcagta 33746050  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    || |||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||||||    
T  33746051 aattcctcgtttacactaaagacctaggacctacccgtattaatttcaacctaggaacttctagatctgag 33746121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 18618301 - 18618117
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||| | |||||||||||| |||  ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||     
T  18618301 aaagaacatagtgagtttgttgagccaagtcggtgacaaacatacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattca 18618202  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| |||||| |||||||||||||||||||| | |||||||||| ||||||| |||||||||||||||| ||| |||||||||||    
T  18618201 atatctctcaacaaactcctcgtttacactatatgacctaggacatacccgtctagacttcaacctagggactactagatctgag 18618117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 21478083 - 21478266
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||  |||||||||| ||||||||||||| |||   |||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||| ||     
T  21478083 aaagaacacggtgagtttgttaacccagttcggtg-caacgtcacctactctggaggctaccaagccaggaaggaaatacactagtgtagtccttattca 21478181  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | ||||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  21478182 aaagctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgag 21478266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 58 - 222
Target Start/End: Original strand, 19659432 - 19659597
Alignment:
Q  58 ttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcc 157  Q
    |||||||| ||||||||||||||||||||  |||||||| ||||||| ||||||||||||||| ||||||||||||| || | |||||||||||||||||    
T  19659432 ttgacccaattcggtgacaaacacacctaagctgggggccaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcc 19659531  T
Q  158 tcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||| | | ||||||||||||||  || ||||||||||||||||||||||||||||||||    
T  19659532 tcgtttacactttatgacctaggacctacatgtttagacttcaacctaggaactcctagatctgag 19659597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 32861637 - 32861806
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||| |||||||| ||||||||||||| |||| || ||||| ||||    
T  32861637 tttgttgatccagttcggtgacaaacacacctactctaggggctaccaagtcaggaagaaaatccactagtgtagtccttattctaaagttctcaacaaa 32861736  T
Q  154 ctcctcgttta-cactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||  ||| |||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  32861737 ctcctcgtttataacttaagacctaggacctactcgtctagacttcaacctaggaactcctagatttgag 32861806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 44 - 222
Target Start/End: Complemental strand, 25354814 - 25354637
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    ||||| |||||||||| ||||||||||||| |||   |||||||||||||||||||||||| ||||||||||||||| |||||||| | || || ||| |    
T  25354814 acacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagttcgtattcaatatc 25354716  T
Q  144 tctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||| ||||    
T  25354715 tctcagcaaactccttgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatttgag 25354637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 50907840 - 50908009
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaa 152  Q
    ||||||| || |||||||||||||||||||||||||||| |||||||||||  |||||| |||||||| ||||||||||||| |||| || | |||||||    
T  50907840 gtttgttaactcagttcggtgacaaacacacctactctgagggctaccaagtcaggaagaaaatccactagtgtagtccttattcta-agttatcagcaa 50907938  T
Q  153 actcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  50907939 actcctcgtttacaactctagacctaggacctacccgtattgacttcaacctaggaactcctaaatctgag 50908009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 222
Target Start/End: Original strand, 23541225 - 23541401
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||||| ||||||||||| ||||||||||||||| |||||||||| || || ||||||    
T  23541225 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 23541323  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||  |||||  |||||||||||    
T  23541324 ctcagcaaactcctcgtttgcactaaagacctaggacctacccgtactgacttcaacccgggaacaactagatctgag 23541401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 45 - 210
Target Start/End: Complemental strand, 46741927 - 46741763
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||||||||||||| ||||| ||||||| |||   |||||||||||||||||||||||| | ||||||||||||| |||||| |||||| || ||||||    
T  46741927 cacaatgagtttgttaacccatttcggtg-caacgtcacctactctgggggctaccaagccatgaaggaaatccactagtgtaatccttattcaatagct 46741829  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaact 210  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||| ||||||||||||||||||    
T  46741828 ctcagcaaactcctcgtttgcacttatgacctaggacctacccgtattgacttcaacctaggaact 46741763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 10722011 - 10722141
Alignment:
Q  92 ggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtat 191  Q
    |||| |||||| | |||||||||||| || ||||||||||||| |||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  10722011 ggggttaccaatccaggaaggaaatctactagtgtagtccttattctaaagctctcaacaaactcctcgtttacacttaagacctaggacctacccgtat 10722110  T
Q  192 agacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||    
T  10722111 agacttcaacctaggaactcctagatctgag 10722141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 10935780 - 10935910
Alignment:
Q  92 ggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtat 191  Q
    |||| |||||| | |||||||||||| || ||||||||||||| |||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  10935780 ggggttaccaatccaggaaggaaatctactagtgtagtccttattctaaagctctcaacaaactcctcgtttacacttaagacctaggacctacccgtat 10935879  T
Q  192 agacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||||||    
T  10935880 agacttcaacctaggaactcctagatctgag 10935910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 10198418 - 10198252
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||| |||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||| |||| || |||||||||||    
T  10198418 ttgttaacctagttcggtgacaaacacacctactctaggg-ctaccaagccaggaaggaaatccaccagtgtagtccttattcta-agttctcagcaaac 10198321  T
Q  155 tcctcgtttaca-ctaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  ||||||| ||  ||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  10198320 tccaagtttacaactctagacctaggacctacccgtcttgacttcaacctaggaactcctagatctgag 10198252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 24143122 - 24143292
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| ||| ||||||||| |||   |||||||||||||||||||||||  ||||||||||||||| |||||||||| || || ||||||||||||    
T  24143122 gagtttgttaacctagttcggtg-caacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgtattcaatagctctcagc 24143220  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||| ||||||||| |||||| |||||||||||||||||||  ||||| |||||| |||||||||||||||||    
T  24143221 aaaatcctcgtttgcactaatgacctaggacctacccgtactgactttaacctatgaactcctagatctgag 24143292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 222
Target Start/End: Original strand, 22554950 - 22555129
Alignment:
Q  44 acacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagc 143  Q
    ||||| |||||||||| ||||||||||||| |||   |||||||||||  ||||||||||| ||||||||||||||| ||||||||||||| || |||||    
T  22554950 acacagtgagtttgttaacccagttcggtg-caacgtcacctactctgaaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagc 22555048  T
Q  144 tctcagcaaactcctcgtttacactaaa--gacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||| | ||||| |  ||||||||||||| |||||  ||||||||||||||||||| ||||||||||    
T  22555049 tctcagcaaactcctcgtatgcactatatggacctaggacctatccgtactgacttcaacctaggaactcgtagatctgag 22555129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 50 - 219
Target Start/End: Original strand, 11905081 - 11905248
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    |||||||||| ||||||||||||| |||   |||||||| |||||  |||||||  ||||||||||||||| |||| |||||||| || |||||||||||    
T  11905081 tgagtttgttaacccagttcggtg-caacgtcacctactttggggt-taccaagtcaggaaggaaatccactagtgcagtccttattcaatagctctcag 11905178  T
Q  150 caaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
     ||||| ||||||||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||    
T  11905179 taaacttctcgtttacactaaagacctatgacttacctgtattgacttcaacctaggaactcctagatct 11905248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 11325288 - 11325149
Alignment:
Q  81 cacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta-aagacctagg 179  Q
    ||||| |||||| ||||||||||| ||||||||||||||| ||||||||||||| || |||||||||| |||||||||||||| ||||| | ||||||||    
T  11325288 cacctgctctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttgcactatatgacctagg 11325189  T
Q  180 acctacccgtatagacttcaacctaggaactcctagatct 219  Q
    |||||||||||   |||||||||||||||||| |||||||    
T  11325188 acctacccgtactaacttcaacctaggaactcgtagatct 11325149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 19894981 - 19894805
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||| ||||||||| |||   ||| |||||| || |||||||||| ||||| ||||||||| |||||||| | || || ||||||    
T  19894981 cacagtgagtttgttaacctagttcggtg-caacgtcacatactctaggagctaccaagccaggaacgaaatccactagtgtagttcgtattcaatagct 19894883  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||  ||||||||||||| |||||||| |||||||    
T  19894882 ctcagcaaactcctcgtttgaactaatgacctaggacctacccgtactgacttcaacctagaaactcctaaatctgag 19894805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 8163757 - 8163943
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagcta-----ggaaggaaatccacaagtgtagtcctt 133  Q
    |||||||||| |||||||||| ||||||||||||| |||   |||||||||| ||| ||||||||| |     |||||||||| ||| |||| |||||||    
T  8163757 aaagaacacagtgagtttgttaacccagttcggtg-caacgtcacctactctaggg-ctaccaagccaagccaggaaggaaattcactagtgcagtcctt 8163854  T
Q  134 actctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | || | ||||| |||||||||||||||||||  | | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8163855 attcaaaagctcccagcaaactcctcgtttacctttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgag 8163943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 95 - 222
Target Start/End: Complemental strand, 19183809 - 19183682
Alignment:
Q  95 gctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtataga 194  Q
    |||||||||| ||||||||||||||| |||||| ||  || ||||||||||||| |||||| || ||||||||||||||||||||||| | |||| ||||    
T  19183809 gctaccaagccaggaaggaaatccactagtgtattctgtattctatagctctcaacaaacttcttgtttacactaaagacctaggacccatccgtctaga 19183710  T
Q  195 cttcaacctaggaactcctagatctgag 222  Q
     |||||||||||||||||||||||||||    
T  19183709 tttcaacctaggaactcctagatctgag 19183682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 2679839 - 2680003
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaa 153  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||  |||| || ||||||||||    
T  2679839 tttgttaacccagtacggtgacaaacacacctactctgggggcaaccaagttaggaaggaaatccactattgtagtccttgttcta-agttctcagcaaa 2679937  T
Q  154 ctcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||  ||||||    |  || |||||||||| ||||  ||||||||||||||| ||||||||||||||    
T  2679938 ctccaagtttac---tatcacataggacctactcgtactgacttcaacctaggagctcctagatctgag 2680003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 221
Target Start/End: Original strand, 41785421 - 41785590
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||||||||||||| ||||||||||||| ||||  |||||||||||||| | ||||||||||||| |||||||||| || |||| || |||||||    
T  41785421 gagtttgttgacccagttctgtgacaaacacacatactacgggggctaccaagccaagaaggaaatccactagtgtagtccctattctaaagttctcagc 41785520  T
Q  151 aaactcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 221  Q
    |||  || ||||||| ||| ||||  ||| ||||||| || |||| |||||||||||||||| || ||||||    
T  41785521 aaa--ccacgtttacaacttaagatatagaacctacctgtttagatttcaacctaggaactcttatatctga 41785590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 16655507 - 16655340
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| ||| ||||| | || ||||||||||||||| ||||||| ||||| | ||||||||||||| || |||||||||| |||| || |||||||||||    
T  16655507 ttgttaacctagttcagcgataaacacacctactctaggggctaacaagccaagaaggaaatccactagggtagtccttattcta-agttctcagcaaac 16655409  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||   |||| |||  ||||||||||||||||| | | || |||||||||||||||||||||||||||    
T  16655408 tccttagttacgactttagacctaggacctacccatcttgagttcaacctaggaactcctagatctgag 16655340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 33737973 - 33738050
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtcc 131  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||||||    
T  33737973 tttgttaacccagttcggtgacaaacacacctactatggaggctaccaagccaggaaggaaatccactagtgtagtcc 33738050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 100
Target Start/End: Complemental strand, 26245034 - 26244988
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctacc 100  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||    
T  26245034 tttgttaacccagttcggtgaaaaacacacctactctggaggctacc 26244988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 13268835 - 13268902
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccac 120  Q
    ||||||| ||||||||||||| |||   ||||||| ||||||||||||||||  |||||||||||||||    
T  13268835 gtttgttcacccagttcggtg-caacttcacctacatctgggggctaccaagtcaggaaggaaatccac 13268902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 140; Significance: 2e-73; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 7724 - 7541
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||| ||||||||||||| |||    
T  7724 aaagaacacagtgagtttgttgacctagttcggtgacaaacacacttactctaggggctaccaagccaggaaggaaattcactagtgtagtccttattct 7625  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7624 atagctctcaacaaactcctcatttacactaaagacctaggacctacccatatagacttcaacctaggaactcctagatctgag 7541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 18311 - 18128
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctggggg-ctaccaagctaggaaggaaatccacaagtgtagtccttactc 137  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||| ||||||||||||| ||    
T  18311 aaagaacatagtgagtttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattc 18212  T
Q  138 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18211 tatagctctcagcaaactcctcgattacactaaaga-ctaggacctacccgtatagacttcaacctaggaactcctagatctgag 18128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 27705 - 27522
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctggggg-ctaccaagctaggaaggaaatccacaagtgtagtccttactc 137  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||| ||||||||||||| ||    
T  27705 aaagaacatagtgagtttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattc 27606  T
Q  138 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27605 tatagctctcagcaaactcctcgattacactaaaga-ctaggacctacccgtatagacttcaacctaggaactcctagatctgag 27522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 39 - 221
Target Start/End: Original strand, 26379 - 26561
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| |||    
T  26379 aaagaacacagtgagtttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattct 26478  T
Q  139 atagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 221  Q
     ||||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  26479 gtagctctcaacaaactcctcatttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctga 26561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 87710 - 87894
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctac-tctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactc 137  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| ||||||||||||| ||    
T  87710 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctacgtatgggggct-ccaagctaggaaggaaatccactagtgtagtccttattc 87808  T
Q  138 tatagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  87809 aatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagacttcaacccaggaactcctagatctgag 87894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 43 - 222
Target Start/End: Complemental strand, 25854 - 25674
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||| || ||||    
T  25854 aacacaatgagtttattgacccagttcggtgacaaacacacctactctgggagctaccaagccaggaaggaaatccactggtgtagtccttattcaatag 25755  T
Q  143 ctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25754 ctctcaacaaactcctcgtttacactagatgacctaggacctacccgtatagacttcaacctacgaactcctagatctgag 25674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 43 - 222
Target Start/End: Complemental strand, 17458 - 17279
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||  |||||| |||||||| ||||||||||||| |||||||    
T  17458 aacacagtgagtttgttgacccagtttcgtgacaaacacacctactctgggggctaccaagtcaggaagaaaatccactagtgtagtccttattctatag 17359  T
Q  143 ctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  17358 ctctcagcaaattcctcgttaacactaaagacctaggacctacccgtatagacttcaacctagaaactcttagatctgag 17279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 39 - 222
Target Start/End: Original strand, 40310 - 40493
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||     
T  40310 aaagaacacagtgagtttgttgacccagttcagtgacaa-cacacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattca 40408  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | ||||||||||||||||||||||||||| | | ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  40409 aaagctctcagcaaactcctcgtttacactttatgacctaggacctaccagtatagaattcaacctaggaactcctagatctgag 40493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 43 - 222
Target Start/End: Complemental strand, 110438 - 110257
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaa-cacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctata 141  Q
    ||||||||||||||||||| |||||||||||||||| ||||| |||||| ||||||||||||  ||||||||||||||| ||||||||||||| || |||    
T  110438 aacacaatgagtttgttgaaccagttcggtgacaaaacacacatactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaata 110339  T
Q  142 gctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  110338 gctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatttgag 110257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 2543 - 2359
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||| | ||||||| ||||| ||||||||| ||||  ||||||||||||| ||     
T  2543 aaagaacacaatgagtttgttgacccatttcggtgacaagcacacctactttaggggctatcaagccaggaaggaagtccaatagtgtagtccttattca 2444  T
Q  139 atagctctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2443 atagctctcagcaaactccccgtttacactatatgacctaggacctagccgtatagacttcaacctaggaactcctagatctgag 2359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 61651 - 61474
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | ||||||||||||| |||||||| |||| || ||||||    
T  61651 cacaatgagtttgttgacccagttcggtgacaaacacat-tactctgggggctaccaagccaagaaggaaatccactagtgtagttcttattcaatagct 61553  T
Q  145 ctcagcaaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||| | |||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  61552 ctcagcaaactcattgtttacactatatgacctaagacctacccgtatagacttcaacctaggaactcctagatctgag 61474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 43 - 169
Target Start/End: Complemental strand, 50272 - 50146
Alignment:
Q  43 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatag 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||| || ||||    
T  50272 aacacaatgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatag 50173  T
Q  143 ctctcagcaaactcctcgtttacacta 169  Q
    |||||| |||| |||||||||||||||    
T  50172 ctctcaacaaaatcctcgtttacacta 50146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 39 - 219
Target Start/End: Complemental strand, 16809 - 16628
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||||||| | ||||||||||| ||     
T  16809 aaagaacacagtgagtttgttgactcagttcggtgacaaacacacctactccgggggctaccaagccagaaaggaaatccactactgtagtccttattca 16710  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatct 219  Q
    | |||| | |||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16709 aaagctataagcaaactcctcatttacactttatgacctaggacctacccgtatagacttcaacctaggaactcctatatct 16628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 45 - 222
Target Start/End: Complemental strand, 53102 - 52928
Alignment:
Q  45 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagct 144  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||||||||||||||||| |||| |||||||||| ||||||||||||| |||||||||    
T  53102 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccagga-ggaaatccactagtgtagtccttattctatagct 53005  T
Q  145 ctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |  |||||||||||||||||||||||||||    
T  53004 ctcagcaaactcctcgtttacactaaagacctaggacctacccgt-ttggtttcaacctaggaactcctagatctgag 52928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 45929 - 45867
Alignment:
Q  160 gtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||    
T  45929 gtttccactaaagacctaggacctacccgtattgacttcaacctaagaactccttgatctgag 45867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 70 - 222
Target Start/End: Original strand, 36598 - 36751
Alignment:
Q  70 ggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaactcctcgtttacacta 169  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || |||||||||| ||||||||||||||||||||    
T  36598 ggtgacaaacacacctactctggaggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacacta 36697  T
Q  170 -aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
     | ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||    
T  36698 tatgacctaggacctacctgtatatacttcaaactaggaactcccagatctgag 36751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 50 - 222
Target Start/End: Original strand, 103092 - 103263
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    |||||||||| ||||||||| ||| |||   |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| || |||||||| ||    
T  103092 tgagtttgttaacccagttcagtg-caacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctgag 103190  T
Q  150 caaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  103191 caaactccttgtttgcaccaaagacctaggacctacccgtactgacttcaacctaggaactcctagatctgag 103263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 39 - 222
Target Start/End: Complemental strand, 16397 - 16214
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||| |||||||||| ||||||||||||| |||   || | ||| ||||||||||||||| ||||||||||||||| ||||||||||||| ||     
T  16397 aaagaacacagtgagtttgttaacccagttcggtg-caacgtcaaccactttgggggctaccaagccaggaaggaaatccactagtgtagtccttattca 16299  T
Q  139 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | |||||||| |||||||||| ||||||| | | |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16298 aaagctctcaacaaactcctcatttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgag 16214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 36285 - 36455
Alignment:
Q  51 gagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagc 150  Q
    ||||||||| | ||||||||||| |||   |||||||||||||||||||||||| |||||| |||||||| ||||||||||||| || | ||||||||||    
T  36285 gagtttgttaatccagttcggtg-caacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaaaagctctcagc 36383  T
Q  151 aaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||||| ||||||| |||||| ||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  36384 aaacttctcgtttgcactaatgacctaggacctaccggtactgacttcaacctaggaactcctagatctgag 36455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 39 - 169
Target Start/End: Original strand, 5621 - 5750
Alignment:
Q  39 aaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactct 138  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||     
T  5621 aaagaacacaatgaatttgttgacccagttcggtgtcaaacacacctactctaggg-ctaccaagcaaggaaggaaatccacaagtgtagtccttattca 5719  T
Q  139 atagctctcagcaaactcctcgtttacacta 169  Q
    |||||||||||||||||| ||||||||||||    
T  5720 atagctctcagcaaactcatcgtttacacta 5750  T

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Target: scaffold0035 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 37357 - 37525
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||||||||||| ||||||| ||| ||||| ||||||||  ||||||||||||||| ||||||||||||| |||| || |||||||||||    
T  37357 ttgttaacccagttcggtgacagacacacccactatgggg-ctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaac 37455  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagac-ttcaacctaggaactcctagatctgag 222  Q
    ||||| ||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  37456 tcctcatttacaacttaagacctaggacctacccgtctagactttcaacctaggaactcctagatatgag 37525  T

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Target: scaffold0022 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 52 - 222
Target Start/End: Original strand, 3111 - 3278
Alignment:
Q  52 agtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagca 151  Q
    |||||||| | ||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||||||| | || || | |||||||||||    
T  3111 agtttgttaatccagttcggtgacaa-cacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtacgtattcaacagctctcagca 3209  T
Q  152 aactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    ||  || ||||| |||||| |||||||||||||||||||  || |||||||||||||||||||||| ||||    
T  3210 aa--ccacgtttgcactaatgacctaggacctacccgtactgatttcaacctaggaactcctagatttgag 3278  T

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Target: scaffold0328 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 222
Target Start/End: Complemental strand, 17145 - 16973
Alignment:
Q  50 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcag 149  Q
    |||||||||| ||||||||||||| |||   |||||||| |||||   ||||| | ||||||||||||||| ||||||||||||| || ||||||||||     
T  17145 tgagtttgttaacccagttcggtg-caacgtcacctactatggggctaaccaatccaggaaggaaatccactagtgtagtccttattcaatagctctcaa 17047  T
Q  150 caaactcctcgtttacacta-aagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||| ||||| | ||||||| ||| |||||||  ||||||||||||||||||||||||||||||    
T  17046 caaactcctcgtttgcactatatgacctagtacccacccgtactgacttcaacctaggaactcctagatctgag 16973  T

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Target: scaffold0015 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 202386 - 202552
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||||| |||||||||||  |||||||||||||||||||  ||||||||||||||| ||||||||||||| |||| || |||||| |||     
T  202386 ttgttaacccagttcgttgacaaacacaagtactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagtaaa- 202484  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
      | | ||||| ||| |||||||||||||||||| | | |||||||||||||||||| |||||||||||    
T  202485 -tcacatttacaacttaagacctaggacctacccatctggacttcaacctaggaacttctagatctgag 202552  T

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Target: scaffold0505 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 222
Target Start/End: Complemental strand, 10204 - 10037
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||||||||||||| |||| |||||| ||||||||||||  || |||||||||||| |||||||||||||  ||| |  ||||| |||||    
T  10204 ttgttaacccagttcggtgacaaatacacttactcttggggctaccaagtcagaaaggaaatccactagtgtagtccttatacta-acttctcaccaaac 10106  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||| |||||| |||  |||||||||||||| |||| | |||||||||| |||||||||||||||||||    
T  10105 tccttgtttacaactctagacctaggacctatccgtcttgacttcaaccgaggaactcctagatctgag 10037  T

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Target: scaffold0520 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 222
Target Start/End: Original strand, 5409 - 5576
Alignment:
Q  55 ttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaaac 154  Q
    ||||| |||||||||||||||||||||||||||||| ||||||   |||  || |||||||||||| ||||||||||||| || | || ||| |||||||    
T  5409 ttgttaacccagttcggtgacaaacacacctactctaggggctgttaagtcagaaaggaaatccactagtgtagtccttattcca-agttctgagcaaac 5507  T
Q  155 tcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||  |||||| |||  ||||||||||| |||| || |  |||||||||||||||||||||||||||||    
T  5508 tccaagtttacaactctagacctaggacttacctgtcttaacttcaacctaggaactcctagatctgag 5576  T

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Target: scaffold0423 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 222
Target Start/End: Original strand, 13596 - 13765
Alignment:
Q  53 gtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccacaagtgtagtccttactctatagctctcagcaa 152  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||||||||| |||||| |||| ||  |||||||| ||   |||| || |||||||||    
T  13596 gtttgttaatccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaattcattagtgtagttctagttcta-agttctcagcaa 13694  T
Q  153 actcctcgtttac-actaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    | |||  |||||| ||| |  |||| |   |||||||||| ||||||||||||||||||| |||| |||||    
T  13695 attccaagtttacaacttatcaccttgacactacccgtattgacttcaacctaggaactcatagacctgag 13765  T

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Target: scaffold0480 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 222
Target Start/End: Original strand, 11295 - 11346
Alignment:
Q  171 agacctaggacctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  11295 agacctaggacctaccggtattgacttcaacctaggtactcctagatctgag 11346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 12553 - 12511
Alignment:
Q  180 acctacccgtatagacttcaacctaggaactcctagatctgag 222  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  12553 acctacccgtatagacttcaacctagaaactcctagatctgag 12511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 18540 - 18605
Alignment:
Q  54 tttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccac 120  Q
    |||||||||||||||||||| |||   |||||||| | ||||||||||||| | |||||||||||||    
T  18540 tttgttgacccagttcggtg-caacttcacctacttttggggctaccaagccatgaaggaaatccac 18605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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