View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0104_high_16 (Length: 222)
Name: NF0104_high_16
Description: NF0104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0104_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 12509131 - 12509339
Alignment:
| Q |
1 |
ccaacttggtaatatgtacactgttggtattttgggagaatctaaatcaatcattatattgaactaagaacaaatacacaagttcgtttggacaccgcgg |
100 |
Q |
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| T |
12509131 |
ccaacttggtaatatgtacactgttggtattttgggacaatctaaatcaatcattatattgaactaagaacaaatacacaagttagtttgaacaccgcag |
12509230 |
T |
|
| Q |
101 |
cttcactcacaaccttaaaatattatcaatgtggccttctaatgtggtcttttaactcacacttttcacataaatattctctccctcaagtatgagactc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |
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| T |
12509231 |
cttcactcacaaccttaaaatattatcaatgtggccttctaatgtggtcttttaactcacacttttcacataaatattctctccttcaagtatgagattc |
12509330 |
T |
|
| Q |
201 |
tctgcatct |
209 |
Q |
| |
|
||||||||| |
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|
| T |
12509331 |
tctgcatct |
12509339 |
T |
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