View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0105_low_1 (Length: 495)

Name: NF0105_low_1
Description: NF0105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0105_low_1
NF0105_low_1
[»] chr5 (25 HSPs)
chr5 (1-399)||(43323773-43324167)
chr5 (1-399)||(32698406-32698799)
chr5 (403-484)||(14477189-14477272)
chr5 (336-400)||(13382999-13383063)
chr5 (336-399)||(38490702-38490765)
chr5 (340-399)||(41869418-41869477)
chr5 (336-399)||(2676608-2676672)
chr5 (340-399)||(7849977-7850036)
chr5 (339-398)||(29149296-29149355)
chr5 (340-399)||(42879239-42879299)
chr5 (338-396)||(18888714-18888773)
chr5 (263-399)||(21492273-21492408)
chr5 (336-394)||(41458269-41458327)
chr5 (339-399)||(9409952-9410013)
chr5 (340-400)||(6950352-6950412)
chr5 (348-400)||(8806708-8806759)
chr5 (336-399)||(13490034-13490098)
chr5 (340-400)||(14652123-14652183)
chr5 (336-399)||(5121587-5121650)
chr5 (336-399)||(5579002-5579066)
chr5 (339-398)||(33922691-33922751)
chr5 (336-399)||(39537781-39537845)
chr5 (340-398)||(14004778-14004836)
chr5 (139-215)||(21492144-21492218)
chr5 (173-205)||(13490224-13490256)
[»] chr3 (22 HSPs)
chr3 (1-399)||(9467523-9467916)
chr3 (1-399)||(33443199-33443593)
chr3 (336-401)||(1424342-1424407)
chr3 (337-400)||(6025144-6025207)
chr3 (336-400)||(1420190-1420254)
chr3 (336-400)||(22917792-22917856)
chr3 (336-399)||(23045259-23045322)
chr3 (336-399)||(30376917-30376980)
chr3 (336-399)||(31885332-31885395)
chr3 (336-400)||(19156735-19156800)
chr3 (336-400)||(25071277-25071342)
chr3 (336-399)||(27941912-27941976)
chr3 (338-398)||(29693866-29693926)
chr3 (339-399)||(30191571-30191631)
chr3 (352-399)||(36640723-36640770)
chr3 (336-399)||(53077366-53077430)
chr3 (336-399)||(6583635-6583698)
chr3 (336-398)||(10993469-10993531)
chr3 (340-385)||(15760517-15760562)
chr3 (348-399)||(10994529-10994581)
chr3 (348-399)||(44663731-44663781)
chr3 (336-401)||(4126976-4127040)
[»] chr7 (27 HSPs)
chr7 (1-399)||(10015795-10016189)
chr7 (1-399)||(37548836-37549234)
chr7 (141-328)||(36628163-36628350)
chr7 (336-399)||(135357-135420)
chr7 (336-399)||(15680105-15680168)
chr7 (336-401)||(48636358-48636423)
chr7 (336-399)||(19312325-19312388)
chr7 (336-399)||(31072925-31072988)
chr7 (336-399)||(48238116-48238179)
chr7 (339-399)||(8069234-8069294)
chr7 (336-399)||(8389696-8389760)
chr7 (336-399)||(12379303-12379366)
chr7 (350-399)||(5770523-5770572)
chr7 (336-401)||(6189781-6189846)
chr7 (336-399)||(4539512-4539576)
chr7 (341-400)||(39535201-39535260)
chr7 (342-391)||(30082919-30082968)
chr7 (142-206)||(15991747-15991811)
chr7 (336-399)||(18667012-18667076)
chr7 (336-399)||(43823964-43824028)
chr7 (338-400)||(13753758-13753821)
chr7 (340-399)||(19593169-19593228)
chr7 (336-391)||(41822524-41822579)
chr7 (1-53)||(36628448-36628501)
chr7 (337-399)||(5949701-5949763)
chr7 (353-402)||(44733167-44733217)
chr7 (356-400)||(36628107-36628151)
[»] chr4 (22 HSPs)
chr4 (1-399)||(56366937-56367331)
chr4 (336-399)||(49242563-49242626)
chr4 (336-401)||(38052593-38052658)
chr4 (336-400)||(14033712-14033776)
chr4 (337-399)||(14192702-14192764)
chr4 (336-397)||(17647958-17648019)
chr4 (336-400)||(51337306-51337370)
chr4 (338-399)||(10373770-10373831)
chr4 (336-400)||(39480650-39480715)
chr4 (339-399)||(28143836-28143896)
chr4 (339-399)||(29283371-29283431)
chr4 (348-399)||(6942324-6942375)
chr4 (340-399)||(10095425-10095485)
chr4 (351-399)||(9900438-9900485)
chr4 (340-392)||(41509591-41509643)
chr4 (336-399)||(1843554-1843617)
chr4 (139-205)||(20152555-20152621)
chr4 (348-390)||(51364004-51364046)
chr4 (352-396)||(716530-716574)
chr4 (336-399)||(6262016-6262079)
chr4 (1-53)||(41509255-41509308)
chr4 (339-399)||(2296973-2297033)
[»] chr8 (19 HSPs)
chr8 (1-399)||(12699875-12700272)
chr8 (336-399)||(6927920-6927983)
chr8 (338-400)||(31597164-31597226)
chr8 (336-399)||(3762339-3762403)
chr8 (336-399)||(11995096-11995159)
chr8 (340-399)||(28374979-28375038)
chr8 (338-399)||(1981234-1981296)
chr8 (339-399)||(45117137-45117198)
chr8 (336-399)||(7973378-7973442)
chr8 (337-399)||(3509847-3509909)
chr8 (339-399)||(9137186-9137246)
chr8 (353-399)||(1528401-1528447)
chr8 (339-399)||(28376120-28376180)
chr8 (350-401)||(2808085-2808136)
chr8 (336-371)||(28508944-28508979)
chr8 (340-401)||(16729376-16729438)
chr8 (338-391)||(29049999-29050053)
chr8 (348-389)||(11649094-11649135)
chr8 (339-399)||(40971089-40971150)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-396)||(65985-66378)
[»] chr6 (21 HSPs)
chr6 (1-399)||(4090854-4091248)
chr6 (336-399)||(31475156-31475219)
chr6 (337-399)||(14677386-14677448)
chr6 (336-400)||(9534314-9534377)
chr6 (348-391)||(31129397-31129440)
chr6 (336-399)||(33516977-33517040)
chr6 (339-400)||(22012514-22012576)
chr6 (339-399)||(1603013-1603074)
chr6 (336-400)||(34043180-34043245)
chr6 (140-200)||(14673174-14673234)
chr6 (339-398)||(18674997-18675057)
chr6 (336-399)||(21442393-21442457)
chr6 (139-196)||(4065796-4065853)
chr6 (340-399)||(20990100-20990160)
chr6 (339-390)||(22524528-22524579)
chr6 (339-399)||(15059811-15059872)
chr6 (351-400)||(30634438-30634487)
chr6 (336-399)||(1131416-1131480)
chr6 (338-400)||(3229587-3229648)
chr6 (354-400)||(14286604-14286650)
chr6 (340-392)||(12269066-12269118)
[»] scaffold0164 (1 HSPs)
scaffold0164 (403-484)||(9939-10022)
[»] scaffold0116 (1 HSPs)
scaffold0116 (336-399)||(40460-40523)
[»] chr2 (33 HSPs)
chr2 (336-399)||(18582941-18583004)
chr2 (336-399)||(24484160-24484223)
chr2 (337-399)||(2565275-2565337)
chr2 (337-401)||(18781561-18781625)
chr2 (336-399)||(90712-90775)
chr2 (336-399)||(38696798-38696861)
chr2 (336-399)||(45277864-45277927)
chr2 (164-241)||(9913159-9913236)
chr2 (336-399)||(7880711-7880774)
chr2 (339-400)||(44314441-44314503)
chr2 (339-400)||(44322620-44322682)
chr2 (336-400)||(33015590-33015655)
chr2 (336-395)||(14903684-14903744)
chr2 (336-399)||(19685439-19685503)
chr2 (340-399)||(9057056-9057115)
chr2 (337-399)||(9912989-9913050)
chr2 (339-397)||(10022563-10022621)
chr2 (139-208)||(38423147-38423215)
chr2 (350-399)||(41423233-41423282)
chr2 (339-399)||(19674457-19674517)
chr2 (336-399)||(22576378-22576442)
chr2 (340-399)||(5828220-5828279)
chr2 (340-399)||(25472647-25472706)
chr2 (341-396)||(37594813-37594868)
chr2 (350-399)||(31549491-31549540)
chr2 (339-400)||(31707958-31708018)
chr2 (340-385)||(40709902-40709947)
chr2 (340-399)||(2553702-2553762)
chr2 (336-395)||(6221032-6221092)
chr2 (139-205)||(43673468-43673534)
chr2 (337-385)||(18496685-18496733)
chr2 (348-399)||(33054399-33054450)
chr2 (340-399)||(41826362-41826422)
[»] chr1 (20 HSPs)
chr1 (336-399)||(1347104-1347167)
chr1 (336-400)||(36296357-36296421)
chr1 (336-399)||(42721895-42721958)
chr1 (336-398)||(9956586-9956648)
chr1 (337-399)||(26221341-26221403)
chr1 (336-400)||(5049095-5049160)
chr1 (336-399)||(22070145-22070209)
chr1 (336-396)||(34307845-34307905)
chr1 (336-399)||(32179175-32179238)
chr1 (336-399)||(21906021-21906085)
chr1 (339-399)||(28946200-28946260)
chr1 (340-395)||(33051743-33051798)
chr1 (348-399)||(49229734-49229785)
chr1 (337-385)||(9022873-9022921)
chr1 (339-400)||(48596745-48596807)
chr1 (344-396)||(48955284-48955336)
chr1 (342-400)||(41665350-41665408)
chr1 (339-399)||(27431191-27431252)
chr1 (339-392)||(43354262-43354315)
chr1 (336-385)||(48999065-48999114)
[»] scaffold0743 (1 HSPs)
scaffold0743 (341-398)||(3684-3741)
[»] scaffold0601 (1 HSPs)
scaffold0601 (336-399)||(6428-6492)
[»] scaffold0308 (1 HSPs)
scaffold0308 (336-399)||(12486-12550)
[»] scaffold0002 (1 HSPs)
scaffold0002 (348-399)||(119739-119790)
[»] scaffold0093 (1 HSPs)
scaffold0093 (336-399)||(50565-50629)
[»] scaffold0016 (4 HSPs)
scaffold0016 (336-399)||(88027-88091)
scaffold0016 (336-399)||(89453-89517)
scaffold0016 (336-399)||(88503-88567)
scaffold0016 (336-399)||(88979-89043)


Alignment Details
Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 399
Target Start/End: Original strand, 43323773 - 43324167
Alignment:
Q  1 ttcttagataataaatattaccaatattttataattaatgagacacattattaagaactaaagggctgnnnnnnnntcttatcgatttcttgatacataa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||        || |||| ||||||||| ||||||    
T  43323773 ttcttagataataaatattaccaatattttataattagtgagacacattattaagaac-aaagggctgaaaaaaa-tcatatcaatttcttgacacataa 43323870  T
Q  101 ttagaaa-caagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaaggg 199  Q
    ||||||| ||||||||||||||        ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  43323871 ttagaaaacaagaaaacacaat---tttttataggtagggggtgtatatagaaatcaatgtttaatatgcaagtatatatagcaaatcacactaaaaggg 43323967  T
Q  200 ctaaaacataaaacagatcagctcatcatctattatttgacaagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacgtt 299  Q
    | ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  43323968 ccaaaacattaaacagatcagcccatcatctattatttgacaactaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacttt 43324067  T
Q  300 ttgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||| || || | |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43324068 ttgctatatgcaaccctaccctaaaattatttttgtgggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 43324167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 399
Target Start/End: Complemental strand, 32698799 - 32698406
Alignment:
Q  1 ttcttagataataaatattaccaatattttataattaatgagacacattattaagaactaaagggctgnnnnnnnntcttatcgatttcttgatacataa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||| |        ||||||| ||||||| | ||||||    
T  32698799 ttcttagataataaatattaccaatattttataattagtgagacacattattaagaac-aaatggccgaaaaaaa-tcttatcaatttcttaacacataa 32698702  T
Q  101 ttagaaacaagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggc 200  Q
    |||||||||||||||||||||        ||||||| |||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||    
T  32698701 ttagaaacaagaaaacacaat--ttttttataggtagggggtgtatatataaatcaatgtttaatacgcaagtatatatagcaaatcacactaaaagggc 32698604  T
Q  201 taaaacataaaacagatcagctcatcatctattatttgacaagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacgttt 300  Q
     ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  32698603 caaaacattaaacagatcagcccatcatctattatttgacaactaagtagtcgggcctcataatgaaattttccaaacataccccagatataccacgttt 32698504  T
Q  301 tgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| ||||| |||||||||||||       ||| |||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  32698503 tgctatatgcacccctcccctaaaattatttttttggg-cccctatgggcatgggccctaggccttcgcacctccggcctatgcctagggccggccctg 32698406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 403 - 484
Target Start/End: Complemental strand, 14477272 - 14477189
Alignment:
Q  403 tatttcgccatgatcgtgatttagatcttgaattgtat--cttgaatatcatggacaccatttttcttctcaatatcttccttt 484  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||  ||||||||    
T  14477272 tatttcgccatgatcgtgatttagatcttgaattgtataacttgaagatcatagacaccatttttcttctcaattacttccttt 14477189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 13382999 - 13383063
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  13382999 gggccccctaacggcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctgt 13383063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 38490765 - 38490702
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  38490765 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 38490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 41869477 - 41869418
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  41869477 cccctacgagcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 41869418  T

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Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 2676672 - 2676608
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  2676672 gggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 2676608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 7850036 - 7849977
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  7850036 cccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 7849977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 29149355 - 29149296
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccct 398  Q
    |||||||| |||||| |||||||||||||||||||||  |||||||||||||||||||||    
T  29149355 ccccctaccggcatgagccctaggccgtcgcacccccaacctatgcctagggccggccct 29149296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 42879299 - 42879239
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  42879299 cccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 42879239  T

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Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 396
Target Start/End: Complemental strand, 18888773 - 18888714
Alignment:
Q  338 gccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggcc 396  Q
    ||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  18888773 gccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggcc 18888714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 399
Target Start/End: Original strand, 21492273 - 21492408
Alignment:
Q  263 atgaaattttctaaacataccccagataaaccacgttttgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctagg 362  Q
    ||||||||| ||||| |||||||  ||||||||  | |||||||| |||||| |||||||||||||        |  |||||||||||||||||| |||     
T  21492273 atgaaatttgctaaatatacccccaataaaccaaatcttgctatacccacccctcccctaaaattatatttttcgagcccctacgggcatgggcc-taga 21492371  T
Q  363 ccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||| |||| | ||||||||||| ||||||||||||    
T  21492372 ccgtcacaccactggcctatgccttgggccggccctg 21492408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 336 - 394
Target Start/End: Complemental strand, 41458327 - 41458269
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccgg 394  Q
    ||||||| ||| ||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  41458327 gggccccttaccggcataggccctaggccgtcgcactcccggcctatgtctagggccgg 41458269  T

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Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 9409952 - 9410013
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    |||||||| | |||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  9409952 ccccctaccgacatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 9410013  T

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Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 400
Target Start/End: Complemental strand, 6950412 - 6950352
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    |||||| | ||||||||||||||||||||||| |  |||||||||||||| ||||||||||    
T  6950412 cccctatgcgcatgggccctaggccgtcgcactcgtggcctatgcctaggaccggccctgt 6950352  T

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Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 400
Target Start/End: Original strand, 8806708 - 8806759
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  8806708 ggcatgggccctag-ccgtcgcacccccggcctatgcctagggctagccctgt 8806759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 13490098 - 13490034
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctat-gcctagggccggccctg 399  Q
    ||||||||||| |||| ||||||||||||||||||| | |||||||| || ||||||||||||||    
T  13490098 gggccccctaccggcaagggccctaggccgtcgcactcgcggcctatggcttagggccggccctg 13490034  T

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Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 400
Target Start/End: Original strand, 14652123 - 14652183
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||| ||||||||||||||||| |||||| |  |||||||||||||| ||||||||||    
T  14652123 cccctaccggcatgggccctaggccatcgcactcgtggcctatgcctaggaccggccctgt 14652183  T

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Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 5121587 - 5121650
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||| ||| |||||| ||| |||||| ||||||||| ||||||||||||||||| ||||||    
T  5121587 gggccccttactggcatgtgccgtaggccatcgcacccctggcctatgcctagggccagccctg 5121650  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 5579002 - 5579066
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||| ||||||||| ||||||||| |  |||||||| ||||||||||||||||    
T  5579002 gggccccctaccggcaagggccctagcccgtcgcactcgtggcctatgccctagggccggccctg 5579066  T

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Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 33922691 - 33922751
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctat-gcctagggccggccct 398  Q
    |||||||| |||  || ||||||||||||| ||||||||||||| ||||||||||||||||    
T  33922691 ccccctaccggctaggaccctaggccgtcgtacccccggcctatggcctagggccggccct 33922751  T

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Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 39537781 - 39537845
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| ||||  ||||||||||||||||||   ||||||||| ||||||||||||||||    
T  39537781 gggccccctaccggcaaaggccctaggccgtcgcacttgcggcctatgccctagggccggccctg 39537845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 14004836 - 14004778
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccct 398  Q
    ||||||||||||||| |||||||||  ||||| ||| |||||| ||| |||||||||||    
T  14004836 cccctacgggcatggaccctaggccaccgcacacccagcctataccttgggccggccct 14004778  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 21492144 - 21492218
Alignment:
Q  139 gggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggctaaaacataaaacag 215  Q
    |||||||||||||||||  ||||||||||| | |||||||||| || ||| ||||||||  | ||||||| ||||||    
T  21492144 gggtgtatatagaaatc--tgtttaatatgggtgtatatatagtaagtcagactaaaagacccaaaacattaaacag 21492218  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 13490256 - 13490224
Alignment:
Q  173 tatatatagcaaatcacactaaaagggctaaaa 205  Q
    |||||||||||||||||||||||||||| ||||    
T  13490256 tatatatagcaaatcacactaaaagggcaaaaa 13490224  T

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Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 399
Target Start/End: Original strand, 9467523 - 9467916
Alignment:
Q  1 ttcttagataataaatattaccaatattttataattaatgagacacattattaagaactaaagggctgnnnnnnnntcttatcgatttcttgatacataa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||        || |||| ||||||||| ||||||    
T  9467523 ttcttagataataaatattaccaatattttataattagtgagacacattattaagaac-aaagggctgaaaaaaa-tcatatcaatttcttgacacataa 9467620  T
Q  101 ttagaaa-caagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaaggg 199  Q
    ||||||| |||||||||||||         ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9467621 ttagaaaacaagaaaacacaa---atttttataggtagggggtgtatatagaaatcaatgtttaatatgcaagtatatatagcaaatcacactaaaaggg 9467717  T
Q  200 ctaaaacataaaacagatcagctcatcatctattatttgacaagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacgtt 299  Q
    | ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9467718 ccaaaacattaaacagatcagcccatcatctattatttgacaactaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacgtt 9467817  T
Q  300 ttgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    || |||||| ||| | | |||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9467818 tttctatatgcactcctaccctaaaattatttttgtgggccccctacgggcatgggccctaggccgtcgca-ccccggcctatgcctagggccggccctg 9467916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 399
Target Start/End: Complemental strand, 33443593 - 33443199
Alignment:
Q  1 ttcttagataataaatattaccaatattttataattaatgagacacattattaagaactaaagggctgnnnnnnnntcttatcgatttcttgatacataa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||        || |||| ||||||||| ||||||    
T  33443593 ttcttagataataaatattaccaatattttataattagtgagacacattattaagaac-aaacggctgaaaaaaa-tcatatcaatttcttgacacataa 33443496  T
Q  101 ttagaaa-caagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaaggg 199  Q
    ||||||| ||||||||||||||        ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  33443495 ttagaaaacaagaaaacacaat---tttttataggtagggggtgtatatagaaatcaatgtttaatatgcaagtatatatagcaaatcacatcaaaaggg 33443399  T
Q  200 ctaaaacataaaacagatcagctcatcatctattatttgacaagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacgtt 299  Q
    | ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33443398 ccaaaacattaaacagatcagcccatcatctattatttgacaactaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacttt 33443299  T
Q  300 ttgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||| ||||| | |||||||||||       ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  33443298 ttgctatatgcacccctaccctaaaattatttttgtgggccccctacgggcatgggccctaggccttcgcacccccggcctatgactagggccggccctg 33443199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 336 - 401
Target Start/End: Complemental strand, 1424407 - 1424342
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgta 401  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1424407 gggccccctaccggcatgggccctaggccgtcgcacccccggcctatacctagggccggccctgta 1424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 337 - 400
Target Start/End: Original strand, 6025144 - 6025207
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  6025144 ggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctgt 6025207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 1420190 - 1420254
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    |||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||||||||||    
T  1420190 gggccccctacgagcatgggccctaggccgtcgcactcgcagcctatgcctagggccggccctgt 1420254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 22917856 - 22917792
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    |||||||||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  22917856 gggccccctacgagcatgggccctaggccgtcacactcgcggcctatgcctagggccggccctgt 22917792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 23045259 - 23045322
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  23045259 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 23045322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 30376980 - 30376917
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||||||||||| ||||||||    
T  30376980 gggccccctacgagcatgggccctaggccgtcgcactcgcggcctatgcctagggtcggccctg 30376917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 31885332 - 31885395
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  31885332 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 31885395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 19156800 - 19156735
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  19156800 gggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctgt 19156735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 25071342 - 25071277
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    ||||||||||| ||| |||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  25071342 gggccccctaccggcttgggccctaggccgtcgcactcgcggcctatgccctagggccggccctgt 25071277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 27941912 - 27941976
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| | |||| |||| ||||||||||||||||    
T  27941912 gggccccctaccggcatgggccctaggccgtcgcactcgcggcttatgccctagggccggccctg 27941976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 338 - 398
Target Start/End: Complemental strand, 29693926 - 29693866
Alignment:
Q  338 gccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccct 398  Q
    |||||| || ||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  29693926 gccccccaccggcatgggccctaggccgtcgcacccccgacctttgcctagggcaggccct 29693866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 30191571 - 30191631
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| ||||||||||||||||||| ||| ||||| ||||| ||||||||||||||||    
T  30191571 ccccctaccggcatgggccctaggccgttgcatccccgacctattcctagggccggccctg 30191631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 36640770 - 36640723
Alignment:
Q  352 tgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||    
T  36640770 tgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 36640723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 53077366 - 53077430
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||  |||||||||||||||||||||||| |  |||||||| ||||||||||||||||    
T  53077366 gggccccctatcggcatgggccctaggccgtcgcactcgtggcctatgccctagggccggccctg 53077430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 6583698 - 6583635
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||| |||||| |||| ||||||||||| |||| || ||| |||||||||||||||||||||||    
T  6583698 gggctccctacaggcaagggccctaggcggtcgtactcccagcctatgcctagggccggccctg 6583635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 10993469 - 10993531
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccct 398  Q
    ||||||||||  |||||||||| ||||||||| ||| | ||||||||||||||||||| ||||    
T  10993469 gggccccctaacggcatgggccttaggccgtcacactctcggcctatgcctagggccgaccct 10993531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 15760562 - 15760517
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcc 385  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||    
T  15760562 cccctaccggcatgggccctaggccgtcgcactcgcggcctatgcc 15760517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 10994529 - 10994581
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    |||||||||||||| ||||||||| | ||||||||| ||||||||||||||||    
T  10994529 ggcatgggccctagaccgtcgcactcgcggcctatgccctagggccggccctg 10994581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 44663731 - 44663781
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||| |||||||| ||||||  ||||||||||||||||||||||||    
T  44663731 ggcatgggccgtaggccgtagcaccct-ggcctatgcctagggccggccctg 44663781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 401
Target Start/End: Complemental strand, 4127040 - 4126976
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgta 401  Q
    |||||||||||  |||||||   ||||||||| |||| ||| ||||||||||||||||||||||||    
T  4127040 gggccccctactagcatgggagttaggccgtctcacctccg-cctatgcctagggccggccctgta 4126976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 399
Target Start/End: Original strand, 10015795 - 10016189
Alignment:
Q  1 ttcttagataataaatattaccaatattttataattaatgagacacattattaagaactaaagggctgnnnnnnnntcttatcgatttcttgatacataa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | |        ||||||| ||||||| | ||||||    
T  10015795 ttcttagataataaatattaccaatattttataattagtgagacacattattaagaac-aaaggaccgaaaaaaa-tcttatcaatttcttaacacataa 10015892  T
Q  101 ttagaaacaagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggc 200  Q
    ||||||| |||||||||||||        ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  10015893 ttagaaataagaaaacacaat-tttttttataggtacggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcagatcatactaaaagggc 10015991  T
Q  201 taaaacataaaacagatcagctcatcatctattatttgacaagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacgttt 300  Q
     ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10015992 caaaacattaaacagatcagcccatcatctattatttgacaactaagtagtcgggcctcataatgaaattttccaaacataccccagataaaccacgttt 10016091  T
Q  301 tgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| ||||| |||||||||||||       ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10016092 tgctatatgcacccctcccctaaaattatttttttggg-cccctacgggcatgggccctaggccgtcgcacctccggcctatgcctagggccggccctg 10016189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 399
Target Start/End: Original strand, 37548836 - 37549234
Alignment:
Q  1 ttcttagataataaatattaccaatattttataattaatgagacaca--ttattaagaactaaagggctgnnnnnnnntcttatcgatttcttgatacat 98  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||| |||||||||        || |||| ||||||||| ||||    
T  37548836 ttcttagataataaatattaccaatattttataattagtgagacacacgttattaagaac-aaagggctgaaaaaaa-tcatatcaatttcttgacacat 37548933  T
Q  99 aattagaaa-caagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaag 197  Q
    ||||||||| ||||||||||||||        ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  37548934 aattagaaaacaagaaaacacaat-tttttttataggtagggggtgtatatagaaatcaatgtttaatatgcaagtatatatagcaaatcacaccaaaag 37549032  T
Q  198 ggctaaaacataaaacagatcagctcatcatctattatttgacaagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacg 297  Q
    ||| ||||||| ||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37549033 ggccaaaacattaaacaaatcagcccatcatctattatttgacaactaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccact 37549132  T
Q  298 ttttgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccc 397  Q
    ||||||||||| || || | |||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37549133 ttttgctatatgcatccctaccctaaaattatttttgtgggccccctacgggcatgggccctaggccgtcgcacccctggcctatgcctagggccggccc 37549232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 141 - 328
Target Start/End: Complemental strand, 36628350 - 36628163
Alignment:
Q  141 gtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggctaaaacataaaacagatcagctcatcatctattatttgac 240  Q
    ||||||||||||||  || ||||||||| ||||||||||||||||||||||| ||||||  |||| || |||||||||||| ||||||||  ||||||||    
T  36628350 gtgtatatagaaatatatttttaatatgggagtatatatagcaaatcacactgaaaggggcaaaaaattaaacagatcagcccatcatcttatatttgac 36628251  T
Q  241 aagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacgttttgctatatccacccgtcccctaaaatta 328  Q
    || |||||||||||||||||||||||||||| |||||||||| ||  | |||||| || ||||||||| |||||  ||||||||||||    
T  36628250 aattaagtagtcgggcctcataatgaaatttgctaaacatactcccaaaaaaccaggtcttgctatatgcaccccacccctaaaatta 36628163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 135420 - 135357
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  135420 gggccccctacaggcatgggccctaggccgtcgcactcccgacctatgcctagggccggccctg 135357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 15680105 - 15680168
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  15680105 gggccccctacgagcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 15680168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 401
Target Start/End: Complemental strand, 48636423 - 48636358
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgta 401  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  48636423 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctgta 48636358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 19312325 - 19312388
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||||    
T  19312325 gggccccctaccggcatggaccctaggccgtcgcactcacggcctatgcctagggccggccctg 19312388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 31072925 - 31072988
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| || ||||||||||||||||||||| | |||||||||||||||||||||||||    
T  31072925 gggccccctaccgggatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 31072988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 48238179 - 48238116
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  48238179 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 48238116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 8069294 - 8069234
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  8069294 ccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 8069234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 8389696 - 8389760
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  8389696 gggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 8389760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 12379366 - 12379303
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||| ||||| ||||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  12379366 gggccctctacgagcatgggccctaggccgtcgcactcgcggcctatgccttgggccggccctg 12379303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 399
Target Start/End: Complemental strand, 5770572 - 5770523
Alignment:
Q  350 catgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  5770572 catgggccctaggccgtcgcatccccggcctatgcctagggccggtcctg 5770523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 401
Target Start/End: Original strand, 6189781 - 6189846
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgta 401  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||| |||| |||||||||    
T  6189781 gggccccctactggcatgggccctaggccgtcgcactcgtggcctatgcctggggctggccctgta 6189846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 4539576 - 4539512
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||| | |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  4539576 gggccccctcccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 4539512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 400
Target Start/End: Original strand, 39535201 - 39535260
Alignment:
Q  341 ccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||| ||||||||||||| | ||||||||| |||||||| |||||||||||||||||    
T  39535201 ccctacgagcatgggccctagactgtcgcacccgcggcctatccctagggccggccctgt 39535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 30082919 - 30082968
Alignment:
Q  342 cctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggc 391  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||||||||    
T  30082919 cctacgggcatggtccctaggccgccgcactcccggcctatgcctagggc 30082968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 15991811 - 15991747
Alignment:
Q  142 tgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggctaaaac 206  Q
    |||||||| ||||| |||||||||| | |||||||||||||||||||||| |||| ||| |||||    
T  15991811 tgtatataaaaatctatgtttaatacgagagtatatatagcaaatcacaccaaaatggccaaaac 15991747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 18667076 - 18667012
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||| ||||||||||||||||||| |  |||||||| ||||||||||||||||    
T  18667076 gggccccctaccggcaagggccctaggccgtcgcactcgtggcctatgccctagggccggccctg 18667012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 43824028 - 43823964
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  |||||||| |||||| |||||||||    
T  43824028 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgccctaggaccggccctg 43823964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 13753821 - 13753758
Alignment:
Q  338 gccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    ||||||||| |||| ||||||||||| ||||||| | ||||||||| |||||||||||||||||    
T  13753821 gccccctaccggcaagggccctaggctgtcgcactcgcggcctatgccctagggccggccctgt 13753758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 19593228 - 19593169
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| ||| || ||||||||| ||||| ||| ||||||||||||||||||||||||    
T  19593228 cccctacgagcaaggaccctaggccatcgcatcccaggcctatgcctagggccggccctg 19593169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 391
Target Start/End: Original strand, 41822524 - 41822579
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggc 391  Q
    ||||||||||| ||||  |||||||||||| |||||||| ||||||||||||||||    
T  41822524 gggccccctaccggcaatggccctaggccgccgcacccctggcctatgcctagggc 41822579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36628501 - 36628448
Alignment:
Q  1 ttcttagataataaatattaccaata-ttttataattaatgagacacattatta 53  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  36628501 ttcttggataataaatattaccaatatttttataattagtgagacacatgatta 36628448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 5949763 - 5949701
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||| ||| ||||| ||||||| || | | ||||| |||||||||||||||||||    
T  5949763 ggccccctacggacataggccccaggccgttgcgctcgcggccgatgcctagggccggccctg 5949701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 44733217 - 44733167
Alignment:
Q  353 gggccctaggccgtcgcacccccggcctatg-cctagggccggccctgtaa 402  Q
    ||||| ||||||||||||| |||| |||||| |||||||||||||||||||    
T  44733217 gggccttaggccgtcgcactcccgacctatgccctagggccggccctgtaa 44733167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 400
Target Start/End: Complemental strand, 36628151 - 36628107
Alignment:
Q  356 ccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||||| ||||||||||| ||||||||||| | |||||||||    
T  36628151 ccctaggccatcgcacccccgtcctatgcctagcgacggccctgt 36628107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 228; Significance: 1e-125; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 399
Target Start/End: Original strand, 56366937 - 56367331
Alignment:
Q  1 ttcttagataataaatattaccaatattttataattaatgagacacattattaagaactaaagggctgnnnnnnnntcttatcgatttcttgatacataa 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | |        ||||||| ||||||| | ||||||    
T  56366937 ttcttagataataaatattaccaatattttataattagtgagacacattattaagaac-aaaggaccgaaaaaaa-tcttatcaatttcttaacacataa 56367034  T
Q  101 ttagaaacaagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggc 200  Q
    |||||||||||||||||||||        ||||||| | ||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  56367035 ttagaaacaagaaaacacaat-tttttttataggtacgaggtgtatatagaaatcaatgtttaatatgtgagtatatatagcagatcatactaaaagggc 56367133  T
Q  201 taaaacataaaacagatcagctcatcatctattatttgacaagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacgttt 300  Q
     ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  56367134 caaaacattaaacagatcagcccatcatctattatttgacaactaagtagtcgggcctcataatgaaattttccaaacataccccagataaaccacgttt 56367233  T
Q  301 tgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| ||||| |||||||||||||       ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  56367234 tgctatatgcacccctcccctaaaattatttttttggg-cccctacgggcatgggccctaggccgtcgcacctccggcctatgcctagggccggccctg 56367331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 49242626 - 49242563
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  49242626 gggccccctacgggcaagggccctaggccgtcgcactcccggcctatgcctagggccggccctg 49242563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 336 - 401
Target Start/End: Complemental strand, 38052658 - 38052593
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgta 401  Q
    ||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||    
T  38052658 gggccccctacgggcatggcccctaggccgtcgcactcgcggcctatgcctagggccggccctgta 38052593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 14033712 - 14033776
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    |||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  14033712 gggccccctacgagcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctgt 14033776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 14192702 - 14192764
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  14192702 ggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 14192764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 397
Target Start/End: Original strand, 17647958 - 17648019
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccc 397  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||    
T  17647958 gggccccctacgggcaagggccgtaggccgtcgcactcccggcctatgcctagggccggccc 17648019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 51337370 - 51337306
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  51337370 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctgt 51337306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 10373770 - 10373831
Alignment:
Q  338 gccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  10373770 gccccctaccggcatgggccctaggtcgtcgcaccccaggcctatgccgagggccggccctg 10373831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 39480650 - 39480715
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  39480650 gggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctgt 39480715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 28143836 - 28143896
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  28143836 ccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 28143896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 29283371 - 29283431
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  29283371 ccccctaccggcaagggccctaggccgtcgcacccacggcctatgcatagggccggccctg 29283431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 6942375 - 6942324
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  6942375 ggcatgggtcctatgccgtcgcacccccggcctatgcctagggccggccctg 6942324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 10095425 - 10095485
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  10095425 cccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 10095485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 399
Target Start/End: Original strand, 9900438 - 9900485
Alignment:
Q  351 atgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  9900438 atgggccctaggccgtcgca-ccccgacctatgcctagggccggccctg 9900485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 392
Target Start/End: Original strand, 41509591 - 41509643
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggcc 392  Q
    ||||||| |||||||||||||||||||| |||||| |||||| ||||||||||    
T  41509591 cccctaccggcatgggccctaggccgtcacacccctggcctaagcctagggcc 41509643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 1843554 - 1843617
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||  | ||||| || ||||||||||||||||||||||||||||||| ||| |||||    
T  1843554 gggccccctaacgacatggaccttaggccgtcgcacccccggcctatgcctaggtccgaccctg 1843617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 20152555 - 20152621
Alignment:
Q  139 gggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggctaaaa 205  Q
    |||||| |||||||||| |||||||||||| | |||||||||||||||| ||| |||| ||| ||||    
T  20152555 gggtgtttatagaaatctatgtttaatatgggtgtatatatagcaaatcgcaccaaaaaggccaaaa 20152621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 390
Target Start/End: Complemental strand, 51364046 - 51364004
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctatgcctaggg 390  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  51364046 ggcataggctctaggccgtcgcacccccggcctatgcctaggg 51364004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 396
Target Start/End: Complemental strand, 716574 - 716530
Alignment:
Q  352 tgggccctaggccgtcgcacccccggcctatgcctagggccggcc 396  Q
    |||| ||||||| |||||||||| |||||||||||||||||||||    
T  716574 tgggtcctaggctgtcgcacccctggcctatgcctagggccggcc 716530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 6262016 - 6262079
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| ||||||| || ||||||||||||| | ||||||||| ||||||||||||||||    
T  6262016 gggccccctaccggcatgg-ccttaggccgtcgcactcgcggcctatgccctagggccggccctg 6262079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 41509255 - 41509308
Alignment:
Q  1 ttcttagataataaatattaccaata-ttttataattaatgagacacattatta 53  Q
    ||||| |||||||||||||||||||| |||||  |||| |||||||||||||||    
T  41509255 ttcttggataataaatattaccaatatttttaatattagtgagacacattatta 41509308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 2297033 - 2296973
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||| ||||||||||||||||  ||||| |||| | ||||||| |||||| |||||    
T  2297033 ccccctacgagcatgggccctaggccaccgcacacccgccatatgccttgggccgaccctg 2296973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 399
Target Start/End: Complemental strand, 12700272 - 12699875
Alignment:
Q  1 ttcttagataataaatattaccaatattttataattaatgagacacattatta---agaactaaagggctgnnnnnnnntcttatcgatttcttgataca 97  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||   ||||  ||||||| |        ||||||| ||||||||| |||    
T  12700272 ttcttagataataaatattaccaatattttataattagtgagacgcattattattaagaaa-aaagggccgaaaaaaa-tcttatcaatttcttgacaca 12700175  T
Q  98 taattagaaacaagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaag 197  Q
    |||||||||||| |||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  12700174 taattagaaacatgaaaacacaat--ttttttataggtagggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcataccaaaag 12700077  T
Q  198 ggctaaaacataaaacagatcagctcatcatctattatttgacaagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacg 297  Q
    ||| ||||||| |||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12700076 ggccaaaacattaaacagatcagcccatcatctattattcgacaactaagtagtcgggcctcataatgaaattttctaaacataccctagataaaccacg 12699977  T
Q  298 ttttgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccc 397  Q
    ||||||||||| ||||| |||||||||||||       ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||    
T  12699976 ttttgctatatgcacccctcccctaaaattagttttttgggccccctacgggcatgggccccaggctgtcgcacccccagcctatgcctagggccggccc 12699877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 6927920 - 6927983
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  6927920 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 6927983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 338 - 400
Target Start/End: Complemental strand, 31597226 - 31597164
Alignment:
Q  338 gccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||||  |||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  31597226 gccccctaacggcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctgt 31597164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 3762403 - 3762339
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  3762403 gggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 3762339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 11995096 - 11995159
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| ||||||||||||||||| |||||| |  ||||||||||||||||||||||||    
T  11995096 gggccccctaccggcatgggccctaggccatcgcactcgtggcctatgcctagggccggccctg 11995159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 28374979 - 28375038
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||| ||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  28374979 cccctacaggcatgggccctaggccgtcgcaccacccgtctatgcctagggccggccctg 28375038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 399
Target Start/End: Complemental strand, 1981296 - 1981234
Alignment:
Q  338 gccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  1981296 gccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 1981234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 45117198 - 45117137
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    |||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  45117198 ccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 45117137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 7973378 - 7973442
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  |||||||| ||||||||||||||||    
T  7973378 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgccctagggccggccctg 7973442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 3509909 - 3509847
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||| | |||||| ||||||||||||||| | ||||||||||||||||||| |||||    
T  3509909 ggccccctacagacatgggtcctaggccgtcgcactcgcggcctatgcctagggccgaccctg 3509847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 9137246 - 9137186
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||  ||||||| ||||| | ||||||||||||||||||||||||||||||| ||||    
T  9137246 ccccctaacggcatggaccctaagtcgtcgcacccccggcctatgcctagggccggtcctg 9137186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 1528447 - 1528401
Alignment:
Q  353 gggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||    
T  1528447 gggccctaggccgtcgtacccccgacctatgcctagggccgtccctg 1528401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 28376180 - 28376120
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| | ||||||||||||||||| ||||| || |||||||| |||| |||||||||    
T  28376180 ccccctaccgacatgggccctaggccgtggcacctccagcctatgcttaggaccggccctg 28376120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 401
Target Start/End: Original strand, 2808085 - 2808136
Alignment:
Q  350 catgggccctaggccgtcgcacccccggcctatgcctagggccggccctgta 401  Q
    ||||||||||||||| |||||| |||| |||||| |||||||| ||||||||    
T  2808085 catgggccctaggccatcgcactcccgacctatgtctagggcccgccctgta 2808136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 371
Target Start/End: Complemental strand, 28508979 - 28508944
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcac 371  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28508979 gggccccctaccggcatgggccctaggccgtcgcac 28508944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 401
Target Start/End: Complemental strand, 16729438 - 16729376
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgta 401  Q
    ||||||| |||| ||||||||||||||||||| |  | |||||| ||||||||||||||||||    
T  16729438 cccctaccggcaagggccctaggccgtcgcactcgtgacctatgccctagggccggccctgta 16729376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 29049999 - 29050053
Alignment:
Q  338 gccccctacgggcatgggccctaggcc-gtcgcacccccggcctatgcctagggc 391  Q
    |||||||||||||||||||| |||||| | ||||||| ||| |||||||||||||    
T  29049999 gccccctacgggcatgggccttaggcctgccgcaccctcggtctatgcctagggc 29050053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 11649094 - 11649135
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctatgcctagg 389  Q
    |||||||| |||||| ||||||||||||| ||||||||||||    
T  11649094 ggcatgggtcctaggtcgtcgcacccccgacctatgcctagg 11649135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 40971150 - 40971089
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||  ||| |||||||||||| |||||| | ||||||||| ||||||||||||||||    
T  40971150 ccccctaccagcaagggccctaggccatcgcactcgcggcctatgccctagggccggccctg 40971089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 396
Target Start/End: Complemental strand, 66378 - 65985
Alignment:
Q  1 ttcttagataataaatattaccaatattttataattaatgagacacattattaagaactaaagggctgnnnnnnnntcttatcgatttcttga--tacat 98  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||| |        ||||||| |||||||||  || ||    
T  66378 ttcttagataattaatattaccaatattttataattagtgagacacattattaagaac-aaagggccgaaaaaaa-tcttatcaatttcttgaaatatat 66281  T
Q  99 aattagaaacaagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagg 198  Q
    |||||||||||||||||||||||        ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  66280 aattagaaacaagaaaacacaat-ttttgttataggtagggggtgtatatagaaagcaatgtttaatatgcaagtatatatagcaaatcatactaaaagg 66182  T
Q  199 gctaaaacataaaacagatcagctcatcatctattatttgacaagtaagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacgt 298  Q
    || ||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  66181 gccaaaacattaaacagatcaggccatcatctattatttgacaactaagtagtcgggcctcataatgaaattttctaaacataccccatataaaccacat 66082  T
Q  299 tttgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggcc 396  Q
    |||||||||| ||||| |||||||||||||        ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  66081 tttgctatatgcacccctcccctaaaattattttttt-ggccccctacgggcatgcgccctaggccgtcgcacccccggcctatgcctagggccggcc 65985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 4e-67; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 399
Target Start/End: Original strand, 4090854 - 4091248
Alignment:
Q  1 ttcttagataataaatattaccaatatttt-ataattaatgagacacattattaagaactaaagggctgnnnnnnnntcttatcgatttcttgatacata 99  Q
    ||||| |||||||||||||| ||||||||| ||||||  |||||||||||||||||||   ||||| |         ||| ||| ||||||||| |||||    
T  4090854 ttcttggataataaatattatcaatatttttataatttgtgagacacattattaagaat--aagggatctaaaaaaatctcatcaatttcttgacacata 4090951  T
Q  100 attagaaacaagaaaacacaatannnnnnnataggtaaggggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaaggg 199  Q
    |||||||| || ||||||||||        ||||||| |||||||||||||||| | || |||||||||  |||||||||||||||||||||||||| ||    
T  4090952 attagaaaaaa-aaaacacaat--ttttttataggtagggggtgtatatagaaagctatttttaatatggaagtatatatagcaaatcacactaaaaagg 4091048  T
Q  200 ctaaaacataaaacagatcagctcatcatctattatttgacaagt--aagtagtcgggcctcataatgaaattttctaaacataccccagataaaccacg 297  Q
    | ||||||| |||||||||||| |||||||| ||||||||||| |  |||||||||| |||| ||||||||||| ||||||||||||| |||| ||||||    
T  4091049 ccaaaacattaaacagatcagcccatcatcttttatttgacaactaaaagtagtcggacctcttaatgaaatttgctaaacatacccccgatagaccacg 4091148  T
Q  298 ttttgctatatccacccgtcccctaaaattannnnnnngggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccc 397  Q
    |||||||||||  |||  ||||||||||  |       ||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  4091149 ttttgctatatatacctctcccctaaaa-aaactttttgggccccctacaggcatgggccctagtccgtcgca-ccctggcctatgcctagggccggccc 4091246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 31475156 - 31475219
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  31475156 gggccccctacgagcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 31475219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 14677448 - 14677386
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  14677448 ggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 14677386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 9534314 - 9534377
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||    
T  9534314 gggccccctacgggcatgg-ccttaggccgtcgcactcgcggcctatgcctagggccggccctgt 9534377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 348 - 391
Target Start/End: Complemental strand, 31129440 - 31129397
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctatgcctagggc 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31129440 ggcatgggccctaggccgtcgcacccccggcctatgcctagggc 31129397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 33516977 - 33517040
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| ||||||||||||||||||| |||| |  ||||||||||||||||||||||||    
T  33516977 gggccccctaccggcatgggccctaggccgttgcactcgtggcctatgcctagggccggccctg 33517040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 22012514 - 22012576
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    |||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  22012514 ccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctgt 22012576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 1603074 - 1603013
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    |||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  1603074 ccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 1603013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 34043245 - 34043180
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    ||||||||||| |||||||||||||||||||| ||| | ||||||||| |||||||||||||||||    
T  34043245 gggccccctaccggcatgggccctaggccgtcacactcgcggcctatgccctagggccggccctgt 34043180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 14673174 - 14673234
Alignment:
Q  140 ggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggc 200  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| | ||| ||||||||    
T  14673174 ggtgtatatagaaatctatgtttaatatgggagtatatatagcaaaacccaccaaaagggc 14673234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 18675057 - 18674997
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcc-tagggccggccct 398  Q
    |||||||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  18675057 ccccctaccggcaagggccctaggccgtcgcacccgcggcctatgccttagggccggccct 18674997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 21442457 - 21442393
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgc-ctagggccggccctg 399  Q
    ||||||||||| ||||||| |||||||||||||||| | |||||||||| |||||||||||||||    
T  21442457 gggccccctaccggcatggaccctaggccgtcgcactcgcggcctatgctctagggccggccctg 21442393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 4065796 - 4065853
Alignment:
Q  139 gggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaa 196  Q
    ||||||||||||||| | |||||||||||  |||||||||||||||||||||| ||||    
T  4065796 gggtgtatatagaaagctatgtttaatatttgagtatatatagcaaatcacaccaaaa 4065853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 20990160 - 20990100
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||| |||| ||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  20990160 cccctaccggcaagggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 20990100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 339 - 390
Target Start/End: Complemental strand, 22524579 - 22524528
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctaggg 390  Q
    |||||||  ||||||||||||||||||||||| ||| |||||||||||||||    
T  22524579 ccccctaaaggcatgggccctaggccgtcgcatccctggcctatgcctaggg 22524528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 15059872 - 15059811
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    |||||||| | ||||||||||||||||| |||| |||||| |||| ||||||||||||||||    
T  15059872 ccccctaccgacatgggccctaggccgttgcactcccggcatatgccctagggccggccctg 15059811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 400
Target Start/End: Original strand, 30634438 - 30634487
Alignment:
Q  351 atgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    |||||||||||||||||  ||||||| |||||||||||||||| ||||||    
T  30634438 atgggccctaggccgtcttacccccgacctatgcctagggccgaccctgt 30634487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 1131480 - 1131416
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||| |||| |||||||||||||| |  |||||||| ||||||||||||||||    
T  1131480 gggccccctaccggcaagggctctaggccgtcgcactcttggcctatgccctagggccggccctg 1131416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 400
Target Start/End: Original strand, 3229587 - 3229648
Alignment:
Q  338 gccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||||  ||||||||| ||||| |||||||| || | |||||||||||||||||||||||    
T  3229587 gccccctaacggcatgggctctaggtcgtcgcacgccag-cctatgcctagggccggccctgt 3229648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 400
Target Start/End: Complemental strand, 14286650 - 14286604
Alignment:
Q  354 ggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||||||| ||||||||||| |||||| |||||| |||||||||    
T  14286650 ggccctaggccatcgcacccccgacctatgtctagggtcggccctgt 14286604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 12269118 - 12269066
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggcc 392  Q
    ||||||| |||||| ||||||||||||| ||| |  |||||||||||||||||    
T  12269118 cccctaccggcatgagccctaggccgtctcactcatggcctatgcctagggcc 12269066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 403 - 484
Target Start/End: Complemental strand, 10022 - 9939
Alignment:
Q  403 tatttcgccatgatcgtgatttagatcttgaattgtat--cttgaatatcatggacaccatttttcttctcaatatcttccttt 484  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||  ||||||||    
T  10022 tatttcgccatgatcgtgatttagatcttgaattgtataacttgaagatcatagacaccatttttcttctcaattacttccttt 9939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 40523 - 40460
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40523 gggccccctaatggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 40460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 18582941 - 18583004
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  18582941 gggccccctacgagcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 18583004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 24484223 - 24484160
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24484223 gggccccctaatggcatgggccctaggccgtcgcacccccggactatgcctagggccggccctg 24484160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 2565337 - 2565275
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  2565337 ggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 2565275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 337 - 401
Target Start/End: Original strand, 18781561 - 18781625
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgta 401  Q
    |||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  18781561 ggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctgta 18781625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 90712 - 90775
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  90712 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 90775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 38696861 - 38696798
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||||||||    
T  38696861 gggccccctacgagcatgggccctaggccgtcgcactcgcagcctatgcctagggccggccctg 38696798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 45277864 - 45277927
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  45277864 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 45277927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 9913236 - 9913159
Alignment:
Q  164 atatgcgagtatatatagcaaatcacactaaaagggctaaaacataaaacagatcagctcatcatctattatttgaca 241  Q
    ||||| ||||||||||||||||||||| ||||| ||| ||||||| ||| |||||||| |||||||| ||||||||||    
T  9913236 atatgggagtatatatagcaaatcacattaaaatggccaaaacattaaaaagatcagcccatcatcttttatttgaca 9913159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 7880711 - 7880774
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||  |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  7880711 gggccccctaacggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 7880774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 44314441 - 44314503
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    |||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  44314441 ccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctgt 44314503  T

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Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 44322620 - 44322682
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    |||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  44322620 ccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctgt 44322682  T

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Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 33015590 - 33015655
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    ||||||||||| |||||||||||||||||||| ||| | ||||||||| |||||||||||||||||    
T  33015590 gggccccctaccggcatgggccctaggccgtcacactcgcggcctatgccctagggccggccctgt 33015655  T

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Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 395
Target Start/End: Complemental strand, 14903744 - 14903684
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctat-gcctagggccggc 395  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  14903744 gggccccctaccggcaagggccataggccgtcgcacccccggcctatggcctagggccggc 14903684  T

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Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 19685503 - 19685439
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||| ||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  19685503 gggcctcctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 19685439  T

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Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 9057115 - 9057056
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||| |||| ||||  ||||||||||||||||||||||||||||||| |||||||||    
T  9057115 cccctaccggcaagggcagtaggccgtcgcacccccggcctatgcctaggtccggccctg 9057056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 9913050 - 9912989
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||| | ||||||||||||||    
T  9913050 ggccccctacgggcatgg-ccctaggccgtcgcacccatggcctattcgtagggccggccctg 9912989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 397
Target Start/End: Complemental strand, 10022621 - 10022563
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccc 397  Q
    ||||||||  ||||||||||||||||||||||| || ||||||||||||||||| ||||    
T  10022621 ccccctacatgcatgggccctaggccgtcgcactcctggcctatgcctagggccagccc 10022563  T

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Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 208
Target Start/End: Original strand, 38423147 - 38423215
Alignment:
Q  139 gggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggctaaaacat 208  Q
    ||||||||||||||| | |||||||||||| |||||||||||  ||||| |||||||||||| |||||||    
T  38423147 gggtgtatatagaaagctatgtttaatatgggagtatatata-aaaatcccactaaaagggccaaaacat 38423215  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 41423233 - 41423282
Alignment:
Q  350 catgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||| ||||||||| ||||||||||| |||||||||||||||||||||    
T  41423233 catgggtcctaggccgccgcacccccggtctatgcctagggccggccctg 41423282  T

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Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 19674517 - 19674457
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| ||||||||||||||||||||||||    | ||||||||||||||||||||||    
T  19674517 ccccctaccggcatgggccctaggccgtcgcacttgtgacctatgcctagggccggccctg 19674457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 22576378 - 22576442
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  |||||||| |||||||| |||||||    
T  22576378 gggccccctaccggcatgggccctaggccgtcgcactcatggcctatgccctagggctggccctg 22576442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 5828279 - 5828220
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||| ||| || |||||||    
T  5828279 cccctaccggcatgggccctaggctgtcgcaaccccggcctatgcttagtgctggccctg 5828220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 25472647 - 25472706
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| |||||  ||||||||||| |||| | |||||||||||||||||||||||||    
T  25472647 cccctacgtgcatgacccctaggccgttgcactcacggcctatgcctagggccggccctg 25472706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 37594868 - 37594813
Alignment:
Q  341 ccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggcc 396  Q
    |||||| || ||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  37594868 ccctacagggatgagccctaggctgtcgcacccccggcctatgcctagggctggcc 37594813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 399
Target Start/End: Original strand, 31549491 - 31549540
Alignment:
Q  350 catgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||||||||||||||||| | |||||||||||  |||||||||    
T  31549491 catgggccctaggccgtcgcacccctgacctatgcctagttccggccctg 31549540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 31707958 - 31708018
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    |||||||| ||||||| ||||||||||||||||| ||| ||||||| ||||| |||||||||    
T  31707958 ccccctactggcatgg-ccctaggccgtcgcaccaccgacctatgcatagggtcggccctgt 31708018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 40709902 - 40709947
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcc 385  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||    
T  40709902 cccctaccggcatgggccctaggccgtcgcactcgcggcctatgcc 40709947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 399
Target Start/End: Complemental strand, 2553762 - 2553702
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||| |||| ||||||||||||||||||| |  |||||||| ||||||||||||||||    
T  2553762 cccctaccggcaagggccctaggccgtcgcactcgtggcctatgccctagggccggccctg 2553702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 395
Target Start/End: Complemental strand, 6221092 - 6221032
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgc-ctagggccggc 395  Q
    ||||||||||| ||||| |||| ||||||||||||| | |||||||||| |||||||||||    
T  6221092 gggccccctaccggcataggccttaggccgtcgcactcgcggcctatgctctagggccggc 6221032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 205
Target Start/End: Original strand, 43673468 - 43673534
Alignment:
Q  139 gggtgtatatagaaatcaatgtttaatatgcgagtatatatagcaaatcacactaaaagggctaaaa 205  Q
    ||||||||||| ||||| ||||||||| |  ||||||||||||||||||| || |||| ||| ||||    
T  43673468 gggtgtatataaaaatctatgtttaatgttggagtatatatagcaaatcataccaaaaaggccaaaa 43673534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 18496733 - 18496685
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcc 385  Q
    |||||||||| | ||||||| ||||||||||||||  ||||||||||||    
T  18496733 ggccccctactgccatgggctctaggccgtcgcacttccggcctatgcc 18496685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 33054450 - 33054399
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctat-gcctagggccggccctg 399  Q
    |||| |||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  33054450 ggcaagggccctaggccgtcgca-ccccgacctatggcctagggccggccctg 33054399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 41826362 - 41826422
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||| |||| |||||||||||||||| || |  |||||||| ||||||||||||||||    
T  41826362 cccctaccggcaagggccctaggccgtcgtactcgtggcctatgccctagggccggccctg 41826422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 1347104 - 1347167
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  1347104 gggccccctacgagcatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 1347167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 36296421 - 36296357
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||||||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  36296421 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctgt 36296357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 42721958 - 42721895
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||    
T  42721958 gggccccctaccggcatgggccctaggccgtcgcactcgtggcctatgcctagggccggccctg 42721895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 9956648 - 9956586
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccct 398  Q
    |||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  9956648 gggccccctacgagcatgggccctaggccgtcgcactcgcggcctgtgcctagggccggccct 9956586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 26221403 - 26221341
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||    
T  26221403 ggccccctaccgacatgggccctaggccgtcgcactcgcggcctatgcctagggccggccctg 26221341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 336 - 400
Target Start/End: Complemental strand, 5049160 - 5049095
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctgt 400  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  5049160 gggccccctaccggcatgggccctaggccgtcgcactcgcggcctatgccctagggccggccctgt 5049095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 22070209 - 22070145
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  22070209 gggccccctaccggcatgggccctaggccgtcgcactcacggcctatgccctagggccggccctg 22070145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 396
Target Start/End: Original strand, 34307845 - 34307905
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggcc 396  Q
    ||||||||||  |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  34307845 gggccccctaacggcatgggccctaggccgtcgcactcgcggcctatgcctagggccggcc 34307905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 32179175 - 32179238
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||| ||||| ||||||||||||||||| | ||||||||||||| |||||||||||    
T  32179175 gggccccctacgagcatgagccctaggccgtcgcactcgcggcctatgcctaaggccggccctg 32179238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 21906085 - 21906021
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| ||||||| |||||||||||||||| | ||||||||| ||||||||||||||||    
T  21906085 gggccccctaccggcatggaccctaggccgtcgcactcgcggcctatgccctagggccggccctg 21906021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 28946200 - 28946260
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||| |||||||||| ||||||||||||| |  ||||||||||||||||||||||||    
T  28946200 ccccctaccggcatgggccttaggccgtcgcactcgtggcctatgcctagggccggccctg 28946260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 33051743 - 33051798
Alignment:
Q  340 cccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggc 395  Q
    |||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||    
T  33051743 cccctacgggcaagggccctaggctgtcgcactcccgacctatgcctagggccggc 33051798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 49229734 - 49229785
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  49229734 ggcatgggccctaggccgttgcacccccggcctatgcttagggtcggccctg 49229785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 9022921 - 9022873
Alignment:
Q  337 ggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcc 385  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  9022921 ggccccctaccggcatgggccctaggccatcgcactcccggcctatgcc 9022873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 400
Target Start/End: Original strand, 48596745 - 48596807
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcc-tagggccggccctgt 400  Q
    |||||||| ||||||||| |||||||||||||| | || |||||||| |||||||||||||||    
T  48596745 ccccctactggcatgggctctaggccgtcgcactcgcgacctatgccttagggccggccctgt 48596807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 48955284 - 48955336
Alignment:
Q  344 tacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggcc 396  Q
    ||||||||||||||||||||||  ||||| ||||||| ||||| |||||||||    
T  48955284 tacgggcatgggccctaggccgctgcaccaccggcctttgccttgggccggcc 48955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 41665408 - 41665350
Alignment:
Q  342 cctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctgt 400  Q
    ||||| ||||||||||||||||| |||||||  |  ||||||||||||| |||||||||    
T  41665408 cctaccggcatgggccctaggccatcgcaccttcaacctatgcctagggtcggccctgt 41665350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 27431191 - 27431252
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    |||||||| |||||||| ||||||||||| ||| | ||||||||| ||||||||| ||||||    
T  27431191 ccccctaccggcatgggtcctaggccgtcacactcgcggcctatgccctagggccagccctg 27431252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 392
Target Start/End: Complemental strand, 43354315 - 43354262
Alignment:
Q  339 ccccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggcc 392  Q
    |||| ||||||||||| ||||||||||  ||||||||| || ||||||||||||    
T  43354315 ccccttacgggcatggaccctaggccgatgcacccccgaccaatgcctagggcc 43354262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 48999114 - 48999065
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcc 385  Q
    ||||| |||||  ||||||||||||||||||||||| | |||||||||||    
T  48999114 gggcctcctaccagcatgggccctaggccgtcgcactcgcggcctatgcc 48999065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0743 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0743
Description:

Target: scaffold0743; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 398
Target Start/End: Original strand, 3684 - 3741
Alignment:
Q  341 ccctacgggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccct 398  Q
    |||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  3684 ccctactggcatgggccctaggccgtcgcactcatggcctatgcctagggccggccct 3741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 6492 - 6428
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||| ||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  6492 gggccccctaccggcaagggccctaggccgtcgcactcgcggcctatgccctagggccggccctg 6428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 12486 - 12550
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| ||||||||||||||| |||||||| | ||||||||| ||||||||||||||||    
T  12486 gggccccctaccggcatgggccctaggacgtcgcactcgcggcctatgccctagggccggccctg 12550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 119739 - 119790
Alignment:
Q  348 ggcatgggccctaggccgtcgcacccccggcctatgcctagggccggccctg 399  Q
    |||||||||||||||||||||||||||| |||||||||||||| | ||||||    
T  119739 ggcatgggccctaggccgtcgcacccccagcctatgcctagggtcagccctg 119790  T

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Target: scaffold0093 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 399
Target Start/End: Complemental strand, 50629 - 50565
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatg-cctagggccggccctg 399  Q
    ||||||||||| |||||| |||||||||||||||||   ||||||||| ||||||||||||||||    
T  50629 gggccccctaccggcatgtgccctaggccgtcgcacttgcggcctatgccctagggccggccctg 50565  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000003; HSPs: 4)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 88027 - 88091
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcc-tagggccggccctg 399  Q
    ||||||||||| || | ||||||||||||||||||| | ||||||||||| ||| ||||||||||    
T  88027 gggccccctaccggaaagggccctaggccgtcgcactcgcggcctatgccttagtgccggccctg 88091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 89453 - 89517
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcc-tagggccggccctg 399  Q
    ||||||||||| | || ||||||||||||||||||| |  |||||||||| ||||||||||||||    
T  89453 gggccccctaccgacaagggccctaggccgtcgcactcggggcctatgccttagggccggccctg 89517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 88503 - 88567
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcc-tagggccggccctg 399  Q
    ||||||||||| || | ||||||||||||||||||| | |||||||| || ||| ||||||||||    
T  88503 gggccccctaccggaaagggccctaggccgtcgcactcgcggcctataccttagtgccggccctg 88567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 88979 - 89043
Alignment:
Q  336 gggccccctacgggcatgggccctaggccgtcgcacccccggcctatgcc-tagggccggccctg 399  Q
    ||||||||||| || | ||||||||||||||||||| | |||||||| || ||| ||||||||||    
T  88979 gggccccctaccggaaagggccctaggccgtcgcactcgcggcctataccttagtgccggccctg 89043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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