View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0105_low_4 (Length: 320)
Name: NF0105_low_4
Description: NF0105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0105_low_4
Alignment Details
Target: chr7 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 80 - 205
Target Start/End: Original strand, 46891906 - 46892030
Alignment:
Q
80
acttctcccccaaacccaaaaaagaggttaatggaaaaccccattggcagaatccttgaacattggctagtctaccatccaaacattctaaatttcacat
179
Q
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
46891906
acttctcccccaaacccaaaaa-gaggtgaatggaaaaccccattggcagaatccttgaacattggctagtctaccatccaaacattctaaatttcacat
46892004
T
Q
180
ggaaccctcctcacactccagcctca
205
Q
||||||||||||||||||||||||||
T
46892005
ggaaccctcctcacactccagcctca
46892030
T
HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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