View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend Query Query hiting target
Query hiting target's complemental strand Query's complemental strand hiting target
Query's complemental strand hiting target's complemental strand
Alignment Overview
Query: NF0105_low_5 (Length: 300)
Name: NF0105_low_5
Description: NF0105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[» ] NF0105_low_5
Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 43365477 - 43365671
Alignment:
Q
1
ggggtgcatttccttggaacacgcactgtatatggagtcgcaaatttctctcccatatttggtagttgctttacaactcttatgtcattccggagggatg
100
Q
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
43365477
ggggtgcatttccttggaacacgcactgtatatggagtcgcaaatttctctcccatatttggtagttgctttacaactcttatgtcattccggagggatg
43365576
T
Q
101
ttataaaccaatcggcatcaaataattgagaaaaattgctgcaagaaaataataatcaaatattacttacaaattaaggggtacaatgaaaatgt
195
Q
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
T
43365577
ttataaaccaatcggcatcaaataattgagaaaaattgctgcaagaaaataataatcaaatattacttacaaattaaggggtacaatgaaaatgt
43365671
T
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