View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0106_high_1 (Length: 308)
Name: NF0106_high_1
Description: NF0106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0106_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 31 - 297
Target Start/End: Complemental strand, 38688518 - 38688254
Alignment:
| Q |
31 |
taactatgaccaatggcgatatggaggacatgtgcgggaggagccaccgcacagggcctaaaattttagaannnnnnnnatttttctatttcttcttata |
130 |
Q |
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| T |
38688518 |
taactatgaccaatggcgatatggaggacatgtgcgggaggagccaccgcacagggcgtaaaattttaga---ccccccatttttctatttcttcttata |
38688422 |
T |
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| Q |
131 |
gatgttcttgatgataaaattctatttgaggaattgaatgtaagccaagagttttaacaattgaataagttttatgatattgagttctcttaatacattt |
230 |
Q |
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| T |
38688421 |
gatgttcttgatgataaaattctatttgaggaattgaatgtaagccaggagttttaacaattgaataagttttatgatattgagttctcttaatacattt |
38688322 |
T |
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| Q |
231 |
tagtatttgctataatgcatgcatatcttatagaat-aatatcaactatctttgttacgcaacagcta |
297 |
Q |
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| T |
38688321 |
tattatttgctataatgcatgcatatcttatagaataaatatcaactatctttgttacgcatcagcta |
38688254 |
T |
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