View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0106_low_5 (Length: 291)
Name: NF0106_low_5
Description: NF0106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0106_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 49087551 - 49087755
Alignment:
| Q |
1 |
gtcggtgctgccatctatggcttcaacacaacctcaccaccgctcctttccgccaccttgcagttcaacatcctcattaagaacccaaacaagcgtgtct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49087551 |
gtcggtgctgccatctatggcttcaacacaacctcaccaccgctcctttccgccaccttgcagttcaacatcctcattaagaacccaaacaagcgtgtct |
49087650 |
T |
|
| Q |
101 |
ctgcttactatgacaggttctctgcttttgtgtcctataggaaccaagccataacaccgcaggttatgcttccgccgctgttcctggagaagcacagtca |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49087651 |
ctgcttactatgacaggttctctgcttttgtgtcctataggaaccaagccataacaccgcaggttatgcttccgccgctgttcctggagaagcacagtca |
49087750 |
T |
|
| Q |
201 |
ggtgt |
205 |
Q |
| |
|
||||| |
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|
| T |
49087751 |
ggtgt |
49087755 |
T |
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