View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0109-INSERTION-8 (Length: 684)

Name: NF0109-INSERTION-8
Description: NF0109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0109-INSERTION-8
NF0109-INSERTION-8
[»] scaffold0003 (4 HSPs)
scaffold0003 (25-351)||(47436-47762)
scaffold0003 (534-684)||(47091-47240)
scaffold0003 (581-684)||(48449-48551)
scaffold0003 (369-489)||(47285-47408)
[»] chr6 (34 HSPs)
chr6 (25-351)||(27439600-27439926)
chr6 (534-684)||(27440121-27440270)
chr6 (536-613)||(9927696-9927773)
chr6 (531-613)||(14328717-14328799)
chr6 (531-613)||(14421727-14421809)
chr6 (581-684)||(22299896-22299998)
chr6 (581-684)||(27438811-27438913)
chr6 (531-613)||(293583-293665)
chr6 (369-489)||(27439953-27440076)
chr6 (532-684)||(31738384-31738535)
chr6 (634-684)||(17916515-17916564)
chr6 (624-684)||(12203306-12203366)
chr6 (624-684)||(21749837-21749897)
chr6 (624-683)||(12203167-12203226)
chr6 (634-684)||(5999629-5999678)
chr6 (634-684)||(11104423-11104472)
chr6 (634-684)||(12202218-12202267)
chr6 (634-684)||(17915730-17915779)
chr6 (634-684)||(17916364-17916413)
chr6 (624-684)||(8224373-8224433)
chr6 (624-684)||(12202327-12202387)
chr6 (624-684)||(33328396-33328456)
chr6 (634-682)||(21749699-21749746)
chr6 (581-684)||(33807710-33807812)
chr6 (534-684)||(22298625-22298774)
chr6 (587-684)||(8412315-8412411)
chr6 (634-684)||(17915881-17915930)
chr6 (531-576)||(16268669-16268714)
chr6 (624-684)||(21749249-21749309)
chr6 (588-684)||(31740272-31740367)
chr6 (585-684)||(8411107-8411205)
chr6 (652-684)||(8939116-8939148)
chr6 (652-684)||(26581974-26582006)
chr6 (652-684)||(30860332-30860364)
[»] chr5 (51 HSPs)
chr5 (23-213)||(38472643-38472834)
chr5 (531-684)||(38471310-38471462)
chr5 (237-347)||(38472360-38472470)
chr5 (581-684)||(15613526-15613628)
chr5 (531-613)||(5383033-5383115)
chr5 (531-684)||(40058039-40058191)
chr5 (531-635)||(223296-223399)
chr5 (531-635)||(2167458-2167560)
chr5 (561-671)||(42510148-42510257)
chr5 (531-684)||(19525231-19525383)
chr5 (624-684)||(2472351-2472411)
chr5 (624-684)||(2472465-2472525)
chr5 (624-684)||(6914847-6914907)
chr5 (531-612)||(12830881-12830962)
chr5 (531-612)||(12862861-12862942)
chr5 (624-684)||(12937917-12937977)
chr5 (624-684)||(16802222-16802282)
chr5 (624-684)||(32780117-32780177)
chr5 (624-684)||(37371078-37371138)
chr5 (585-684)||(1663208-1663306)
chr5 (579-682)||(42979471-42979573)
chr5 (581-682)||(1273112-1273212)
chr5 (581-682)||(5384339-5384439)
chr5 (587-684)||(10085844-10085940)
chr5 (634-684)||(12952079-12952128)
chr5 (581-682)||(18695640-18695740)
chr5 (634-684)||(19050770-19050819)
chr5 (624-684)||(1982733-1982793)
chr5 (624-684)||(5820578-5820638)
chr5 (624-684)||(12938666-12938726)
chr5 (624-684)||(12952769-12952829)
chr5 (587-683)||(15614959-15615054)
chr5 (596-684)||(19827148-19827235)
chr5 (628-684)||(32411985-32412041)
chr5 (624-684)||(37371218-37371278)
chr5 (621-684)||(18693719-18693782)
chr5 (621-684)||(21387658-21387721)
chr5 (559-635)||(22819488-22819563)
chr5 (624-682)||(5820718-5820776)
chr5 (534-684)||(12933772-12933921)
chr5 (624-682)||(12938528-12938586)
chr5 (581-679)||(38473548-38473645)
chr5 (634-684)||(641926-641975)
chr5 (634-684)||(3077030-3077079)
chr5 (634-684)||(8705876-8705925)
chr5 (634-684)||(15154113-15154162)
chr5 (634-684)||(16802335-16802384)
chr5 (634-684)||(19050985-19051034)
chr5 (559-613)||(32734222-32734276)
chr5 (427-489)||(38471505-38471567)
chr5 (628-684)||(32415224-32415280)
[»] chr8 (63 HSPs)
chr8 (532-684)||(35943928-35944080)
chr8 (531-671)||(13366993-13367132)
chr8 (531-682)||(36070201-36070351)
chr8 (534-684)||(37324634-37324783)
chr8 (531-684)||(44606160-44606312)
chr8 (581-684)||(37274908-37275010)
chr8 (559-684)||(16363783-16363907)
chr8 (531-684)||(24069389-24069541)
chr8 (559-682)||(7486100-7486222)
chr8 (581-684)||(24068351-24068453)
chr8 (587-684)||(3237439-3237534)
chr8 (531-684)||(19913513-19913665)
chr8 (559-613)||(20308696-20308750)
chr8 (559-613)||(21095329-21095383)
chr8 (587-684)||(31625383-31625479)
chr8 (534-635)||(8395065-8395165)
chr8 (624-684)||(15989165-15989225)
chr8 (624-684)||(21551943-21552003)
chr8 (624-684)||(21552989-21553049)
chr8 (624-684)||(30865160-30865220)
chr8 (581-684)||(36940026-36940128)
chr8 (558-613)||(36756155-36756210)
chr8 (624-682)||(40102854-40102912)
chr8 (531-684)||(117069-117221)
chr8 (634-684)||(3272071-3272120)
chr8 (634-684)||(29441637-29441686)
chr8 (624-684)||(3271181-3271241)
chr8 (624-684)||(3612485-3612545)
chr8 (624-684)||(4675773-4675833)
chr8 (624-684)||(4675913-4675973)
chr8 (628-684)||(7561820-7561876)
chr8 (544-613)||(8095437-8095506)
chr8 (624-684)||(15989025-15989085)
chr8 (624-684)||(15989305-15989365)
chr8 (588-684)||(19914906-19915001)
chr8 (624-684)||(40102973-40103033)
chr8 (531-635)||(2421236-2421339)
chr8 (559-682)||(37276214-37276336)
chr8 (588-682)||(29739643-29739736)
chr8 (559-614)||(39220769-39220824)
chr8 (634-684)||(8502320-8502369)
chr8 (634-684)||(21552095-21552144)
chr8 (634-684)||(21553141-21553190)
chr8 (591-684)||(38591010-38591102)
chr8 (634-684)||(39349485-39349534)
chr8 (634-684)||(41178716-41178765)
chr8 (624-684)||(3271919-3271979)
chr8 (624-684)||(3612618-3612678)
chr8 (628-684)||(7565325-7565381)
chr8 (628-684)||(24703230-24703285)
chr8 (639-684)||(24706263-24706307)
chr8 (624-684)||(30864490-30864550)
chr8 (624-684)||(40102242-40102302)
chr8 (565-614)||(45194573-45194622)
chr8 (652-684)||(1259760-1259792)
chr8 (634-682)||(3271332-3271379)
chr8 (652-684)||(12850140-12850172)
chr8 (634-682)||(14433645-14433692)
chr8 (652-684)||(21524453-21524485)
chr8 (625-684)||(21553744-21553803)
chr8 (652-684)||(35103396-35103428)
chr8 (559-635)||(36938751-36938826)
chr8 (531-607)||(45384337-45384413)
[»] chr7 (61 HSPs)
chr7 (531-680)||(46458656-46458804)
chr7 (532-614)||(26406215-26406297)
chr7 (535-684)||(33459490-33459638)
chr7 (590-684)||(36702798-36702891)
chr7 (561-684)||(43930340-43930462)
chr7 (534-684)||(25154882-25155031)
chr7 (587-684)||(19278374-19278470)
chr7 (534-635)||(131945-132045)
chr7 (587-684)||(33458331-33458426)
chr7 (624-684)||(47809621-47809681)
chr7 (559-682)||(38406041-38406163)
chr7 (622-684)||(19848867-19848929)
chr7 (559-684)||(4857222-4857346)
chr7 (634-684)||(29754732-29754781)
chr7 (531-684)||(41516287-41516439)
chr7 (587-684)||(46674933-46675029)
chr7 (624-684)||(32610845-32610905)
chr7 (587-679)||(36702949-36703040)
chr7 (624-684)||(37375129-37375189)
chr7 (624-684)||(43704629-43704689)
chr7 (632-684)||(3699791-3699842)
chr7 (634-682)||(6772901-6772948)
chr7 (634-684)||(8439938-8439987)
chr7 (634-684)||(29754581-29754630)
chr7 (427-489)||(33459382-33459444)
chr7 (634-684)||(37373555-37373604)
chr7 (595-684)||(46457091-46457179)
chr7 (581-682)||(47163176-47163276)
chr7 (634-684)||(47810185-47810234)
chr7 (624-684)||(8439787-8439847)
chr7 (624-684)||(10338348-10338408)
chr7 (628-684)||(18670542-18670598)
chr7 (531-576)||(28325200-28325245)
chr7 (624-684)||(32610705-32610765)
chr7 (624-684)||(33228868-33228928)
chr7 (624-684)||(33229008-33229068)
chr7 (624-684)||(35087857-35087917)
chr7 (624-684)||(37373694-37373754)
chr7 (624-684)||(40501399-40501459)
chr7 (624-684)||(40501490-40501550)
chr7 (601-684)||(43935206-43935288)
chr7 (622-684)||(18801236-18801298)
chr7 (622-684)||(35087430-35087492)
chr7 (624-682)||(47809513-47809571)
chr7 (634-684)||(1904066-1904115)
chr7 (634-684)||(4229117-4229166)
chr7 (531-613)||(10256214-10256296)
chr7 (634-684)||(21171532-21171581)
chr7 (559-613)||(27899185-27899239)
chr7 (634-684)||(43705588-43705637)
chr7 (624-684)||(6772749-6772809)
chr7 (559-612)||(13286965-13287018)
chr7 (624-684)||(33229428-33229488)
chr7 (624-684)||(37374657-37374717)
chr7 (624-684)||(47810034-47810094)
chr7 (652-684)||(14107853-14107885)
chr7 (652-684)||(14417810-14417842)
chr7 (652-684)||(19105599-19105631)
chr7 (634-682)||(33229579-33229626)
chr7 (652-684)||(37725900-37725932)
chr7 (581-684)||(40926512-40926614)
[»] chr2 (40 HSPs)
chr2 (544-684)||(7036987-7037126)
chr2 (531-665)||(14509249-14509382)
chr2 (581-684)||(6706947-6707049)
chr2 (559-684)||(12852907-12853031)
chr2 (531-684)||(35799533-35799685)
chr2 (535-612)||(28109816-28109893)
chr2 (624-684)||(43015560-43015620)
chr2 (581-682)||(23177696-23177797)
chr2 (581-682)||(23588953-23589054)
chr2 (624-684)||(5435180-5435240)
chr2 (624-684)||(7038367-7038427)
chr2 (624-684)||(15816701-15816761)
chr2 (624-684)||(17859301-17859361)
chr2 (628-684)||(21545108-21545164)
chr2 (624-684)||(27262734-27262794)
chr2 (624-684)||(27264608-27264668)
chr2 (624-684)||(43019281-43019341)
chr2 (621-684)||(12854136-12854199)
chr2 (531-611)||(25570813-25570893)
chr2 (531-613)||(4829556-4829638)
chr2 (559-648)||(7490166-7490255)
chr2 (634-684)||(30202929-30202978)
chr2 (531-684)||(37868983-37869135)
chr2 (624-684)||(15808101-15808161)
chr2 (624-684)||(17858619-17858679)
chr2 (628-680)||(21541086-21541138)
chr2 (634-683)||(22900216-22900264)
chr2 (624-684)||(42772459-42772519)
chr2 (531-607)||(8537109-8537185)
chr2 (531-614)||(10367329-10367412)
chr2 (534-605)||(11575432-11575503)
chr2 (628-682)||(27657786-27657840)
chr2 (531-684)||(12959648-12959800)
chr2 (634-684)||(17179297-17179346)
chr2 (634-684)||(20948423-20948472)
chr2 (634-684)||(22653073-22653122)
chr2 (624-684)||(42368343-42368403)
chr2 (559-611)||(3532287-3532339)
chr2 (634-682)||(17858481-17858528)
chr2 (581-613)||(21012073-21012105)
[»] chr4 (60 HSPs)
chr4 (531-684)||(11114923-11115075)
chr4 (535-684)||(15786973-15787122)
chr4 (531-614)||(38555219-38555302)
chr4 (531-613)||(6140303-6140385)
chr4 (544-614)||(28102166-28102236)
chr4 (532-613)||(38370373-38370455)
chr4 (531-613)||(50530594-50530676)
chr4 (624-684)||(26202421-26202481)
chr4 (534-613)||(17319133-17319212)
chr4 (544-631)||(31712462-31712548)
chr4 (587-664)||(5687216-5687292)
chr4 (634-684)||(15317723-15317772)
chr4 (534-682)||(29663666-29663812)
chr4 (541-682)||(30682980-30683120)
chr4 (587-684)||(33377363-33377459)
chr4 (624-684)||(23202997-23203057)
chr4 (624-684)||(28103521-28103581)
chr4 (581-684)||(46796019-46796121)
chr4 (531-678)||(56296220-56296366)
chr4 (624-682)||(23202263-23202321)
chr4 (634-684)||(28510353-28510402)
chr4 (582-663)||(34439654-34439734)
chr4 (531-684)||(35787817-35787969)
chr4 (634-684)||(36645316-36645365)
chr4 (624-684)||(23202400-23202460)
chr4 (624-684)||(28509768-28509828)
chr4 (624-684)||(28509908-28509968)
chr4 (581-681)||(40146616-40146715)
chr4 (624-684)||(41690078-41690138)
chr4 (559-635)||(86873-86948)
chr4 (581-684)||(11113763-11113865)
chr4 (634-682)||(32509011-32509058)
chr4 (581-684)||(44304972-44305074)
chr4 (559-614)||(17494217-17494272)
chr4 (622-684)||(28370674-28370736)
chr4 (531-661)||(34438450-34438579)
chr4 (634-684)||(306598-306647)
chr4 (634-684)||(8510876-8510925)
chr4 (634-684)||(8516898-8516947)
chr4 (581-682)||(15787495-15787595)
chr4 (634-684)||(26202281-26202330)
chr4 (634-684)||(26428677-26428726)
chr4 (634-684)||(30671015-30671064)
chr4 (634-684)||(30672110-30672159)
chr4 (634-684)||(31711113-31711162)
chr4 (532-614)||(44159175-44159257)
chr4 (634-684)||(46794861-46794910)
chr4 (634-684)||(56297725-56297774)
chr4 (624-684)||(23202857-23202917)
chr4 (624-684)||(28189332-28189392)
chr4 (624-684)||(36644900-36644960)
chr4 (560-613)||(39592261-39592314)
chr4 (652-684)||(936237-936269)
chr4 (634-682)||(32508449-32508495)
chr4 (581-648)||(33376274-33376341)
chr4 (624-679)||(34457474-34457529)
chr4 (621-684)||(37560331-37560394)
chr4 (634-682)||(39135556-39135603)
chr4 (636-684)||(44664374-44664421)
chr4 (621-684)||(53400206-53400269)
[»] chr1 (60 HSPs)
chr1 (587-684)||(3979312-3979408)
chr1 (531-684)||(21277015-21277167)
chr1 (581-684)||(13641278-13641380)
chr1 (587-684)||(26056146-26056242)
chr1 (531-665)||(14169659-14169792)
chr1 (531-613)||(51726787-51726869)
chr1 (634-684)||(47512130-47512179)
chr1 (624-684)||(20171197-20171257)
chr1 (624-684)||(25866707-25866767)
chr1 (624-684)||(32823479-32823539)
chr1 (624-684)||(51760060-51760120)
chr1 (624-684)||(51760707-51760767)
chr1 (624-684)||(52371004-52371064)
chr1 (582-665)||(36511325-36511407)
chr1 (538-684)||(2972958-2973103)
chr1 (586-684)||(3978065-3978162)
chr1 (624-682)||(20170583-20170641)
chr1 (559-684)||(9633796-9633920)
chr1 (531-684)||(13930618-13930770)
chr1 (634-684)||(27114855-27114904)
chr1 (634-684)||(27115498-27115547)
chr1 (634-684)||(32824180-32824229)
chr1 (634-684)||(47511539-47511588)
chr1 (624-684)||(4388014-4388074)
chr1 (624-684)||(32823576-32823636)
chr1 (624-684)||(32824029-32824089)
chr1 (624-684)||(47511388-47511448)
chr1 (624-684)||(51760200-51760260)
chr1 (624-684)||(51760567-51760627)
chr1 (531-635)||(8092668-8092771)
chr1 (581-684)||(13929316-13929418)
chr1 (597-684)||(26054918-26055004)
chr1 (621-684)||(42248337-42248400)
chr1 (581-684)||(50679814-50679916)
chr1 (634-682)||(52371756-52371803)
chr1 (534-684)||(13642503-13642652)
chr1 (624-682)||(25866115-25866173)
chr1 (624-682)||(25866569-25866627)
chr1 (559-614)||(49141467-49141522)
chr1 (653-684)||(51424272-51424303)
chr1 (587-684)||(14390279-14390375)
chr1 (587-684)||(25787163-25787259)
chr1 (634-684)||(25865975-25866024)
chr1 (634-684)||(28309783-28309832)
chr1 (634-684)||(37694674-37694723)
chr1 (634-684)||(38458107-38458156)
chr1 (634-684)||(39193602-39193651)
chr1 (634-684)||(52371155-52371204)
chr1 (624-684)||(20171057-20171117)
chr1 (635-684)||(25432517-25432565)
chr1 (561-665)||(36509851-36509954)
chr1 (538-595)||(38280942-38280999)
chr1 (581-614)||(47560229-47560262)
chr1 (531-682)||(14071147-14071296)
chr1 (652-684)||(17750334-17750366)
chr1 (621-684)||(25785989-25786052)
chr1 (652-684)||(28999861-28999893)
chr1 (634-682)||(39195052-39195099)
chr1 (551-635)||(40109431-40109514)
chr1 (652-684)||(52371847-52371879)
[»] chr3 (61 HSPs)
chr3 (581-684)||(47855331-47855433)
chr3 (534-684)||(26798852-26799001)
chr3 (563-684)||(25583135-25583255)
chr3 (587-684)||(54653965-54654061)
chr3 (559-684)||(11219451-11219575)
chr3 (587-684)||(29536735-29536831)
chr3 (531-613)||(48867373-48867455)
chr3 (587-684)||(51825620-51825716)
chr3 (532-613)||(23559910-23559991)
chr3 (624-684)||(51214201-51214261)
chr3 (581-684)||(8372609-8372711)
chr3 (534-612)||(12062330-12062408)
chr3 (624-684)||(23886137-23886197)
chr3 (624-684)||(30431396-30431456)
chr3 (624-684)||(44384331-44384391)
chr3 (624-684)||(46987346-46987406)
chr3 (531-612)||(49333075-49333156)
chr3 (581-684)||(8371241-8371343)
chr3 (545-613)||(35174339-35174407)
chr3 (585-684)||(47808103-47808201)
chr3 (581-684)||(49334330-49334432)
chr3 (634-682)||(51214063-51214110)
chr3 (624-682)||(23886278-23886336)
chr3 (634-684)||(2225070-2225119)
chr3 (634-684)||(19283755-19283804)
chr3 (630-684)||(42570033-42570086)
chr3 (624-684)||(5810045-5810105)
chr3 (634-683)||(7583882-7583930)
chr3 (588-684)||(11220658-11220753)
chr3 (624-684)||(12106542-12106602)
chr3 (624-684)||(13041968-13042028)
chr3 (624-684)||(13050045-13050105)
chr3 (624-684)||(23886861-23886921)
chr3 (624-684)||(30431533-30431593)
chr3 (624-684)||(30431976-30432036)
chr3 (624-684)||(30838505-30838565)
chr3 (624-684)||(46988504-46988564)
chr3 (624-684)||(51213472-51213532)
chr3 (581-684)||(32980445-32980547)
chr3 (634-682)||(54109668-54109715)
chr3 (622-684)||(10987686-10987748)
chr3 (624-682)||(12106404-12106462)
chr3 (624-682)||(46987485-46987543)
chr3 (653-684)||(47806839-47806870)
chr3 (558-613)||(53808409-53808464)
chr3 (634-684)||(2224893-2224942)
chr3 (634-684)||(7575524-7575573)
chr3 (634-684)||(7583731-7583780)
chr3 (634-684)||(12105380-12105429)
chr3 (634-684)||(13997279-13997328)
chr3 (634-684)||(19283907-19283956)
chr3 (634-684)||(19579340-19579389)
chr3 (624-684)||(12105520-12105580)
chr3 (624-684)||(13997419-13997479)
chr3 (624-684)||(51213612-51213672)
chr3 (652-684)||(381976-382008)
chr3 (587-635)||(2124099-2124146)
chr3 (652-684)||(10817742-10817774)
chr3 (531-635)||(21127995-21128098)
chr3 (652-684)||(42592486-42592518)
chr3 (621-684)||(51401383-51401446)
[»] scaffold0122 (1 HSPs)
scaffold0122 (531-614)||(16035-16118)
[»] scaffold0630 (2 HSPs)
scaffold0630 (634-684)||(3098-3147)
scaffold0630 (634-684)||(2031-2080)
[»] scaffold0007 (3 HSPs)
scaffold0007 (624-684)||(28774-28834)
scaffold0007 (624-684)||(28153-28213)
scaffold0007 (585-614)||(145866-145895)
[»] scaffold1974 (1 HSPs)
scaffold1974 (559-684)||(599-723)
[»] scaffold1878 (1 HSPs)
scaffold1878 (559-684)||(551-675)
[»] scaffold0290 (2 HSPs)
scaffold0290 (559-684)||(9449-9573)
scaffold0290 (581-684)||(8400-8502)
[»] scaffold0081 (2 HSPs)
scaffold0081 (634-684)||(1875-1924)
scaffold0081 (624-684)||(2015-2075)
[»] scaffold0051 (2 HSPs)
scaffold0051 (581-613)||(22218-22250)
scaffold0051 (621-684)||(39933-39996)
[»] scaffold0839 (1 HSPs)
scaffold0839 (624-684)||(46-106)
[»] scaffold0178 (1 HSPs)
scaffold0178 (581-684)||(2258-2360)


Alignment Details
Target: scaffold0003 (Bit Score: 299; Significance: 1e-168; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 25 - 351
Target Start/End: Complemental strand, 47762 - 47436
Alignment:
Q  25 aaatataaaatctccaggtccaaagtaatttacttataaacaacccatcaagaacaactgattattgctaagatgaaagggaccagatttgaatcaaacc 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47762 aaatataaaatctccaggtccaaagtaatttacttataaacaacccagcaagaacaactgattattgctaagatgaaagggaccagatttgaatcaaacc 47663  T
Q  125 caacaattgaatatgtatttttgaattcaaacgaaacatgagatgaattgcgttgtttcaagagatcagataaaaggggcagattgtacgggaagaagat 224  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  47662 caacaattgaatatgtatatttgaattcaaacgaaacatgagatgaattgcgttgtttcaagagatcagataaaaggggcagattgtacgggaatgagat 47563  T
Q  225 gaattgcgttacatgcaagatgaaggaatgaattttagagatagggagagatgggggtggttatgatcgagagaaagaggtccatagagagatggttagt 324  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47562 gaattgcgttgtatgcaagatgaaggaatgagttttagagatagggagagatgggggtggttatgatcgagagaaagaggtccatagagagatggttagt 47463  T
Q  325 tgatagagtggaaatggatctttctgg 351  Q
    |||||||||||||||||||||||||||    
T  47462 tgatagagtggaaatggatctttctgg 47436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 534 - 684
Target Start/End: Complemental strand, 47240 - 47091
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc 633  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  47240 tatggtagaccacctacaaagttaattcaccttagacatttaaagttaaaaattaacggagaggaccaaaatagtaaac-ggaagaagatttatgggacc 47142  T
Q  634 -aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
     |||||||||| |||||| ||||||||| ||||||||||| |||||||||||    
T  47141 aaattgagacaatttaaa-gttaagggatcaaaatgaaattcaaaaataagt 47091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 48449 - 48551
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggga-ccaattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    |||||||||||||||||||||||| ||||||| || |||  |||||||||| | |||||||||| |||| | ||||| ||||||||||||||||||||||    
T  48449 aaaaattaacggagatgaccaaaagagtaaac-ggcagaatatttatgggatcaaattgagacactttata-gttaaaggaccaaaatgaaatccaaaaa 48546  T
Q  680 taagt 684  Q
    |||||    
T  48547 taagt 48551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 369 - 489
Target Start/End: Complemental strand, 47408 - 47285
Alignment:
Q  369 gaagatgaataaagatttgatgtagaagattactacggaaagaagatgaag-nnnnnnnttaggtgattgcggtttattataagttaaagtagat--ccc 465  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||        | ||||||||| ||||||||||||| || || ||||  |||    
T  47408 gaagatgaataaagatctgatgtagaagactactacggaaagaagatgaagaaaaaaaatgaggtgattgtggtttattataagctacagaagatccccc 47309  T
Q  466 tctatgatctaataatcttcattt 489  Q
    ||||||||| || ||| |||||||    
T  47308 tctatgatccaacaattttcattt 47285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 299; Significance: 1e-168; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 25 - 351
Target Start/End: Original strand, 27439600 - 27439926
Alignment:
Q  25 aaatataaaatctccaggtccaaagtaatttacttataaacaacccatcaagaacaactgattattgctaagatgaaagggaccagatttgaatcaaacc 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27439600 aaatataaaatctccaggtccaaagtaatttacttataaacaacccagcaagaacaactgattattgctaagatgaaagggaccagatttgaatcaaacc 27439699  T
Q  125 caacaattgaatatgtatttttgaattcaaacgaaacatgagatgaattgcgttgtttcaagagatcagataaaaggggcagattgtacgggaagaagat 224  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  27439700 caacaattgaatatgtatatttgaattcaaacgaaacatgagatgaattgcgttgtttcaagagatcagataaaaggggcagattgtacgggaatgagat 27439799  T
Q  225 gaattgcgttacatgcaagatgaaggaatgaattttagagatagggagagatgggggtggttatgatcgagagaaagaggtccatagagagatggttagt 324  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27439800 gaattgcgttgtatgcaagatgaaggaatgagttttagagatagggagagatgggggtggttatgatcgagagaaagaggtccatagagagatggttagt 27439899  T
Q  325 tgatagagtggaaatggatctttctgg 351  Q
    |||||||||||||||||||||||||||    
T  27439900 tgatagagtggaaatggatctttctgg 27439926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 534 - 684
Target Start/End: Original strand, 27440121 - 27440270
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc 633  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||||||||    
T  27440121 tatggtagaccacctacaaagttaattcaccttagacatttaaagttaaaaattaacggagaggaccaaaatagtaaac-ggaagaagatttatgggacc 27440219  T
Q  634 -aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
     |||||||||| |||||| ||||||||| ||||||||||| |||||||||||    
T  27440220 aaattgagacaatttaaa-gttaagggatcaaaatgaaattcaaaaataagt 27440270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 536 - 613
Target Start/End: Complemental strand, 9927773 - 9927696
Alignment:
Q  536 tggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||||||||||||||||||||  |||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  9927773 tggtagaccacctacaaagttggttcatcttagacatttaaggttaaaaattaacggagatgaccaaaatagtaaacg 9927696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 613
Target Start/End: Original strand, 14328717 - 14328799
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||| || ||||| ||||||||| |||||||||||||||||    
T  14328717 gtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacg 14328799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 613
Target Start/End: Original strand, 14421727 - 14421809
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||| || ||||| ||||||||| |||||||||||||||||    
T  14421727 gtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaagtaacggagaggaccaaaatagtaaacg 14421809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 22299896 - 22299998
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| |||||||||||||||||||||||||| || ||| ||||||||||||| |||||||||| |||| | |||| ||||||||| ||||| |||||||    
T  22299896 aaaaaataacggagatgaccaaaatagtaaac-ggcagaagatttatgggaccaaattgagacactttata-gttaggggaccaaagtgaaaaccaaaaa 22299993  T
Q  680 taagt 684  Q
    |||||    
T  22299994 taagt 22299998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 27438913 - 27438811
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggga-ccaattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    |||||||||||||||||||||||| ||||||| || |||  |||||||||| | |||||||||| |||| | ||||| ||||||||||||||||||||||    
T  27438913 aaaaattaacggagatgaccaaaagagtaaac-ggcagaatatttatgggatcaaattgagacactttata-gttaaaggaccaaaatgaaatccaaaaa 27438816  T
Q  680 taagt 684  Q
    |||||    
T  27438815 taagt 27438811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 613
Target Start/End: Original strand, 293583 - 293665
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||| || |||||| |||||||| ||||||||| |||||||    
T  293583 gtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaataaacggagaggaccaaaatggtaaacg 293665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 369 - 489
Target Start/End: Original strand, 27439953 - 27440076
Alignment:
Q  369 gaagatgaataaagatttgatgtagaagattactacggaaagaagatgaag-nnnnnnnttaggtgattgcggtttattataagttaaagtagat--ccc 465  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||        | ||||||||| ||||||||||||| || || ||||  |||    
T  27439953 gaagatgaataaagatctgatgtagaagactactacggaaagaagatgaagaaaaaaaatgaggtgattgtggtttattataagctacagaagatccccc 27440052  T
Q  466 tctatgatctaataatcttcattt 489  Q
    ||||||||| || ||| |||||||    
T  27440053 tctatgatccaacaattttcattt 27440076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 684
Target Start/End: Complemental strand, 31738535 - 31738384
Alignment:
Q  532 tctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggga 631  Q
    |||||||| ||||  ||| ||||||  ||||| |||||||||||| || ||||| ||||||||| ||||||||| ||||||  | ||| || ||||||||    
T  31738535 tctatggtggaccgtctataaagttggttcacattagacatttaaggttaaaaactaacggagaggaccaaaatggtaaac-cgcagaagacttatggga 31738437  T
Q  632 cc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    || |||||| ||| |||| | |||| ||||||||| ||||| ||||||||||||    
T  31738436 ccaaattgaaacactttata-gttaggggaccaaattgaaaaccaaaaataagt 31738384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 17916515 - 17916564
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  17916515 aattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 17916564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 12203306 - 12203366
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  12203306 ttatgggaccaaattgagacagtttaaag-ttaaaggaccaaaatgaaattcaaaaataagt 12203366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 21749837 - 21749897
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  21749837 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 21749897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 624 - 683
Target Start/End: Complemental strand, 12203226 - 12203167
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataag 683  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  12203226 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataag 12203167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 5999629 - 5999678
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  5999629 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 5999678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 11104423 - 11104472
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  11104423 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 11104472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 12202267 - 12202218
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  12202267 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 12202218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 17915779 - 17915730
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  17915779 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 17915730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 17916413 - 17916364
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  17916413 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 17916364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 8224373 - 8224433
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| ||||| |||||    
T  8224373 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaattaagt 8224433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 12202327 - 12202387
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  12202327 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattaaaaaataagt 12202387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 33328456 - 33328396
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  33328456 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 33328396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 634 - 682
Target Start/End: Complemental strand, 21749746 - 21749699
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  21749746 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataa 21749699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 33807812 - 33807710
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||||||||||||| ||||||||  |||||||| | ||  |||||||| | ||| |||||||| |||| || ||||||||||||| ||||| |||||||    
T  33807812 aaaaattaacggagaggaccaaaacggtaaacggca-gaaaatttatggcatcaaattgagacactttatag-ttaagggaccaaagtgaaaaccaaaaa 33807715  T
Q  680 taagt 684  Q
    |||||    
T  33807714 taagt 33807710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 684
Target Start/End: Complemental strand, 22298774 - 22298625
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggga-c 632  Q
    |||||||||||||||  ||||||  | |||||||||||||||| || ||||| |||||||   |||||||||  ||||| || |||  | |||||||| |    
T  22298774 tatggtagaccacctgtaaagttcgtccaccttagacatttaaggttaaaaactaacggaagagaccaaaattataaac-ggcagaatagttatgggatc 22298676  T
Q  633 caattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
     || ||||||| ||||||  |||  |||||||||||||| ||||||||||||    
T  22298675 aaactgagacactttaaa-attagaggaccaaaatgaaaaccaaaaataagt 22298625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 8412315 - 8412411
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||| || | | ||||||||||||| |||||||||| |||| | |||| ||||| ||| ||||| | ||||||||||    
T  8412315 taacggagaggaccaaaatagtaaac-ggcacaagatttatgggaccaaattgagacactttata-gttaggggactaaattgaaaacaaaaaataagt 8412411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 17915881 - 17915930
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  17915881 aattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 17915930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 531 - 576
Target Start/End: Complemental strand, 16268714 - 16268669
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaa 576  Q
    |||||||||||||||| |||||||||  ||||| ||||||||||||    
T  16268714 gtctatggtagaccacatacaaagttggttcacgttagacatttaa 16268669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 21749249 - 21749309
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||| ||| ||||||||||| |||||||||||    
T  21749249 ttatgggaccaaattgagacggtttaaag-ttaaaggatcaaaatgaaattcaaaaataagt 21749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 588 - 684
Target Start/End: Original strand, 31740272 - 31740367
Alignment:
Q  588 aacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||| | ||||||||| |||||||| |  || |||||||||||||| |||||||| |||| || ||||||||||||| ||||| | ||||||||||    
T  31740272 aacggataggaccaaaatggtaaacggcataag-atttatgggaccaaattgagacactttatag-ttaagggaccaaattgaaaacaaaaaataagt 31740367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 585 - 684
Target Start/End: Complemental strand, 8411205 - 8411107
Alignment:
Q  585 attaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataag 683  Q
    ||||||||||| |||||||||||||||| || | | |||||||  |||| |||||||||| |||| | |||| ||||| ||| ||||| |||||||||||    
T  8411205 attaacggagaggaccaaaatagtaaac-ggcataagatttataagaccaaattgagacactttata-gttaggggactaaattgaaaaccaaaaataag 8411108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Original strand, 8939116 - 8939148
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||||| ||||||||||    
T  8939116 gttaagggaccaaaatgaaatcaaaaaataagt 8939148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 26582006 - 26581974
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||| ||||||||||||||||    
T  26582006 gttaagggaccaaaataaaatccaaaaataagt 26581974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Original strand, 30860332 - 30860364
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||||| ||||||||||    
T  30860332 gttaagggaccaaaatgaaatcaaaaaataagt 30860364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 2e-82; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 23 - 213
Target Start/End: Complemental strand, 38472834 - 38472643
Alignment:
Q  23 gcaaatataaaatctccaggtccaaagtaatttacttataaacaacccatcaagaacaactgattattgctaagatgaaagggaccagatttgaatcaaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  38472834 gcaaatataaaatctccaggtccaaagtaatttacttataaacaacccaacaagaataattgattattgctaagatgaaagggaccatatttgaatcaaa 38472735  T
Q  123 cccaacaattg-aatatgtatttttgaattcaaacgaaacatgagatgaattgcgttgtttcaagagatcagataaaaggggcagattgtac 213  Q
    |||||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38472734 cccaacaactgaaatgtgtatttttgaattcaaatgaaacatgagatgaattgcgttgtttcaagagatcagataaaaggggcagattgtac 38472643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 531 - 684
Target Start/End: Complemental strand, 38471462 - 38471310
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||||||||||||| ||||||  ||||||||| |||||||| || |||||||||| ||||  ||||||||||||||| |||||| |||||||||     
T  38471462 gtctatggtagaccacctataaagttggttcaccttaaacatttaaggttaaaaattaacagagagaaccaaaatagtaaac-ggaagaagatttatgga 38471364  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||| |||||| ||| |||||| ||||||||||||||||||||| |||||||||||    
T  38471363 accaaattgaaacaatttaaa-gttaagggaccaaaatgaaattcaaaaataagt 38471310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 237 - 347
Target Start/End: Complemental strand, 38472470 - 38472360
Alignment:
Q  237 atgcaagatgaaggaatgaattttagagatagggagagatgggggtggttatgatcgagagaaagaggtccataga--gagatggttagttgatagagtg 334  Q
    |||||||||||||| || | ||||||||| |||| ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||||||| ||||    
T  38472470 atgcaagatgaagggat-agttttagagagaggg-gagatggggctggttatgatcgagagaaagatgtccatagagagagatggttagttgatatagtg 38472373  T
Q  335 gaaatggatcttt 347  Q
    |||||||||||||    
T  38472372 gaaatggatcttt 38472360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 15613628 - 15613526
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||||||||||||| |||||||||||||||| |||||| ||||||||||||| |||||||||| |||| | ||||   |||||||||||||||||||||    
T  15613628 aaaaattaacggagaggaccaaaatagtaaac-ggaagaagatttatgggaccaaattgagacactttata-gttagaagaccaaaatgaaatccaaaaa 15613531  T
Q  680 taagt 684  Q
    |||||    
T  15613530 taagt 15613526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 613
Target Start/End: Complemental strand, 5383115 - 5383033
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||| || ||||| ||||||||| || ||||||||||||||    
T  5383115 gtctatggtggaccacctataaagttgattcaccttagacatttaaggttaaaaactaacggagaggatcaaaatagtaaacg 5383033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 684
Target Start/End: Complemental strand, 40058191 - 40058039
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||| || || ||||||  ||||||||||||||||||  | ||||| ||||||||||||||||||| |||||| || ||| || ||||| |    
T  40058191 gtctatggtggactacttataaagttggttcaccttagacatttaagattaaaaactaacggagatgaccaaaatggtaaac-ggcagaagagttatgag 40058093  T
Q  631 accaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||| |||| |||  ||||  ||||||||| |||||||||| ||||||||||||    
T  40058092 accaatttgaaaca-cttaatagttaagggatcaaaatgaaaaccaaaaataagt 40058039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 531 - 635
Target Start/End: Complemental strand, 223399 - 223296
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||  | ||||| ||| ||| | ||||| | |||||||| ||| || || |||||||    
T  223399 gtctatggtagaccacctacaaagttggttcaccttagacatttaagattaaaaactaatggaaaggaccacattagtaaac-ggaggaagacttatggg 223301  T
Q  631 accaa 635  Q
    |||||    
T  223300 accaa 223296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 531 - 635
Target Start/End: Original strand, 2167458 - 2167560
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||| ||| ||||||  |||||||||||||||||| || ||||| |||| |||| |||||||||| ||||| || ||| ||||||||||    
T  2167458 gtctatggtggaccatctataaagttggttcaccttagacatttaaggttaaaaactaacagaga-gaccaaaataataaac-ggcagaagatttatggg 2167555  T
Q  631 accaa 635  Q
    |||||    
T  2167556 accaa 2167560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 561 - 671
Target Start/End: Complemental strand, 42510257 - 42510148
Alignment:
Q  561 caccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaaggg 659  Q
    |||| ||||||||| | || ||||| |||||||||  ||||||||||||||| || ||| ||||||||||||| |||||||||| |||| | ||||||||    
T  42510257 caccatagacatttgaggttaaaaactaacggagagaaccaaaatagtaaac-ggcagaagatttatgggaccaaattgagacactttata-gttaaggg 42510160  T
Q  660 accaaaatgaaa 671  Q
    |||||| |||||    
T  42510159 accaaactgaaa 42510148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 19525231 - 19525383
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| |||||| || ||||||  |||||| |||| |||||| || |||||  |||||||| ||||||||| |||||||| | || || ||||| |    
T  19525231 gtctatggtggaccacatataaagttggttcaccatagaaatttaaggttaaaaacaaacggagaggaccaaaatggtaaacggca-gaagacttatgtg 19525329  T
Q  631 accaattg-agacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||| || ||||| |||| || ||| ||||||||| ||||| ||||||||||||    
T  19525330 accaaatggagacactttatag-ttaggggaccaaattgaaaaccaaaaataagt 19525383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 2472411 - 2472351
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  2472411 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 2472351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 2472465 - 2472525
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  2472465 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 2472525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 6914847 - 6914907
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  6914847 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 6914907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 612
Target Start/End: Original strand, 12830881 - 12830962
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaac 612  Q
    ||||||||| ||||||||| || |||  ||||||| ||| |||||  || ||||||||||||||| ||||||||||||||||    
T  12830881 gtctatggtggaccacctataatgttggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaac 12830962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 612
Target Start/End: Original strand, 12862861 - 12862942
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaac 612  Q
    ||||||||| ||||||||| || |||  ||||||| ||| |||||  || ||||||||||||||| ||||||||||||||||    
T  12862861 gtctatggtggaccacctataatgttggttcacctaagatatttagggttaaaaattaacggagaggaccaaaatagtaaac 12862942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 12937917 - 12937977
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  12937917 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 12937977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 16802282 - 16802222
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  16802282 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 16802222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 32780117 - 32780177
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  32780117 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 32780177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 37371138 - 37371078
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  37371138 ttatgggaccaaattgagacaatttaaag-ttaagggaccaaaatgaaattcaaaaataagt 37371078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 684
Target Start/End: Complemental strand, 1663306 - 1663208
Alignment:
Q  585 attaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataag 683  Q
    ||||||||||| |||||||||||||||| || ||| ||||||| ||||| |||| ||||| |||| | ||||| ||| |||| |||||||||||||||||    
T  1663306 attaacggagaagaccaaaatagtaaac-ggcagaagatttataggaccaaattaagacactttata-gttaatggatcaaagtgaaatccaaaaataag 1663209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 579 - 682
Target Start/End: Complemental strand, 42979573 - 42979471
Alignment:
Q  579 tgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaa 677  Q
    |||||||| |||||||| |||||||||||||||||| | || || |||| ||||||| |||| ||| |||| || |||  ||||||||||||||||||||    
T  42979573 tgaaaaatcaacggagaggaccaaaatagtaaacggca-gaagaattattggaccaaattgaaacactttatag-ttagaggaccaaaatgaaatccaaa 42979476  T
Q  678 aataa 682  Q
    |||||    
T  42979475 aataa 42979471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 581 - 682
Target Start/End: Complemental strand, 1273212 - 1273112
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||  ||||||||| |||||| | | || ||||||||||||||| |||||||| |||| || |||| |||||||||||||| |||||||    
T  1273212 aaaaactaacggaggggaccaaaattgtaaactgca-gaagatttatgggaccaaattgagacattttatag-ttaaaggaccaaaatgaaaaccaaaaa 1273115  T
Q  680 taa 682  Q
    |||    
T  1273114 taa 1273112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 581 - 682
Target Start/End: Original strand, 5384339 - 5384439
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| |||||||||||||||| ||| || ||||||||||||| |||||||||| |||| | |||| |||| |||| |||||  ||||||    
T  5384339 aaaaactaacggagaggaccaaaatagtaaac-ggacgaagatttatgggaccaaattgagacactttata-gttaggggatcaaattgaaaatcaaaaa 5384436  T
Q  680 taa 682  Q
    |||    
T  5384437 taa 5384439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 10085844 - 10085940
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||   | ||| ||||||||||||| |||||| ||| |||||| |||||| ||||||| |||||| |||||||||||    
T  10085844 taacggagaggaccaaaatagtaaa-tagcagaagatttatgggaccaaattgaaacactttaaa-gttaagagaccaaagtgaaattcaaaaataagt 10085940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 12952079 - 12952128
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  12952079 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 12952128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 581 - 682
Target Start/End: Original strand, 18695640 - 18695740
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||||||||| | |||||||| ||| || || |||||||||| |||||||||| |||| | |||||||||  ||||||||| |||||||    
T  18695640 aaaaactaacggagatgaccatattagtaaac-ggatgaagacttatgggaccaaattgagacactttata-gttaagggaataaaatgaaaaccaaaaa 18695737  T
Q  680 taa 682  Q
    |||    
T  18695738 taa 18695740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 19050819 - 19050770
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  19050819 aattgagacagtttaaag-ttaggggaccaaattgaaatccaaaaataagt 19050770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 1982793 - 1982733
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||| ||||||||| ||||||||||||||| |||| |||||||||||    
T  1982793 ttatgggaccaaattgagatagtttaaag-ttaagggaccaaaataaaattcaaaaataagt 1982733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 5820638 - 5820578
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||||||    
T  5820638 ttatgggaccaaattgagacgatttaaag-ttaagggaccaaaatgaaattcaaaaataagt 5820578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 12938666 - 12938726
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||||||||  ||||||||||    
T  12938666 ttatgggaccaaattgagacagtttaaag-ttaagagaccaaaatgaaatttaaaaataagt 12938726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 12952769 - 12952829
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  12952769 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaatttaaaaataagt 12952829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 587 - 683
Target Start/End: Original strand, 15614959 - 15615054
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataag 683  Q
    |||| |||| |||||||||||||||||| | ||  |||||||| ||||| |||||||| |||| || |||  ||||||||||||||||||||||||||    
T  15614959 taacagagaggaccaaaatagtaaacggca-gaaaatttatggaaccaaattgagacactttatag-ttagcggaccaaaatgaaatccaaaaataag 15615054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 596 - 684
Target Start/End: Original strand, 19827148 - 19827235
Alignment:
Q  596 tgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||||||| |||| ||||||||||||||| |||||||| |||| |  ||| ||||||||| ||||| ||||||||||||    
T  19827148 tgaccaaaatggtaaacgg-aagaagatttatgggaccaaattgagacactttataa-ttatgggaccaaattgaaaaccaaaaataagt 19827235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 684
Target Start/End: Complemental strand, 32412041 - 32411985
Alignment:
Q  628 gggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  32412041 gggaccaatttgagacaatttaaag-ttaagggaccaaattgaaatccaaaaataagt 32411985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 37371218 - 37371278
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| ||||| || |||||||||||||||||||| |||||||||||    
T  37371218 ttatgggaccaaattgagacggtttatag-ttaagggaccaaaatgaaattcaaaaataagt 37371278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 684
Target Start/End: Complemental strand, 18693782 - 18693719
Alignment:
Q  621 gatttatgggacca-attgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||| ||||||||| |||| || ||||||||||||||| |||| |||||||||||    
T  18693782 gatttatgggaccagattgagacattttatag-ttaagggaccaaaataaaattcaaaaataagt 18693719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 684
Target Start/End: Complemental strand, 21387721 - 21387658
Alignment:
Q  621 gatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||| |||||||| |||| || ||| |||||||||||||||| |||||||||||    
T  21387721 gatttatgggaccaaattgagacattttatag-ttaggggaccaaaatgaaattcaaaaataagt 21387658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 635
Target Start/End: Original strand, 22819488 - 22819563
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa 635  Q
    ||||||||||| || ||  || ||||| |||||||||||||||||||||||||| || ||| || ||||||||||||    
T  22819488 ttcaccttagatatatagggttaaaaactaacggagatgaccaaaatagtaaac-ggcagaagagttatgggaccaa 22819563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 682
Target Start/End: Original strand, 5820718 - 5820776
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||||    
T  5820718 ttatgggaccaaattgagacagtttaaa-gttaagggactaaaatgaaatttaaaaataa 5820776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 684
Target Start/End: Complemental strand, 12933921 - 12933772
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc 633  Q
    |||||| || |||||| |||||| ||||| | |||| |||||| || |||||| |||||| | |||| |||| |||||||| | || || ||||| || |    
T  12933921 tatggtggatcacctataaagttgattcatcatagatatttaaggttaaaaataaacggaaaggaccgaaatggtaaacggca-gaagacttatgagatc 12933823  T
Q  634 aa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    || |||||||| |||| || ||| |||| |||||||||| ||||||||||||    
T  12933822 aaattgagacactttatag-ttaggggatcaaaatgaaaaccaaaaataagt 12933772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 12938586 - 12938528
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||| |||||||| |||| ||||||||||||||| |||||||||    
T  12938586 ttatgggaccaaattgagacggtttaaag-ttaaaggaccaaaatgaaattcaaaaataa 12938528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 679
Target Start/End: Original strand, 38473548 - 38473645
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||||||||||| |||||||||||||||||||  | || ||||||||||||||| || ||||| |||| || |||   ||||||||||||||| |||||    
T  38473548 aaaaattaacggaaatgaccaaaatagtaaacgaca-gaagatttatgggaccaaattaagacactttacag-ttagatgaccaaaatgaaatctaaaaa 38473645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 641926 - 641975
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||||| |||| ||||||||| ||||||| ||||||||||    
T  641926 aattgagacagtttaaa-gttaggggaccaaattgaaatctaaaaataagt 641975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 3077030 - 3077079
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| |||||||| |||| |||||| |||||||||||    
T  3077030 aattgagacagtttaaag-ttaagggatcaaattgaaattcaaaaataagt 3077079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 8705925 - 8705876
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||||||||| ||| |||||| |||||||||||    
T  8705925 aattgagacagtttaaag-ttaagggacgaaattgaaattcaaaaataagt 8705876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 15154113 - 15154162
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  15154113 aattgagacagtttaaag-ttaggggaccaaattgaaattcaaaaataagt 15154162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 16802335 - 16802384
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| | |||||| |||||||||||||||||||| |||||||||||    
T  16802335 aattgagacggattaaag-ttaagggaccaaaatgaaattcaaaaataagt 16802384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 19050985 - 19051034
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  19050985 aattgagacagtttaaag-ttaggggaccaaattgaaattcaaaaataagt 19051034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 613
Target Start/End: Complemental strand, 32734276 - 32734222
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||||| ||||||  | ||||| ||||||| |||||||||||||||||||    
T  32734276 ttcaccttagatatttaagattaaaaactaacggaaatgaccaaaatagtaaacg 32734222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 427 - 489
Target Start/End: Complemental strand, 38471567 - 38471505
Alignment:
Q  427 ttaggtgattgcggtttattataagttaaagtagatccctctatgatctaataatcttcattt 489  Q
    ||||||| ||| |||| |||||||| || | ||||||||||||||||| || |||||||||||    
T  38471567 ttaggtggttgtggttcattataagctacaatagatccctctatgatccaacaatcttcattt 38471505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 628 - 684
Target Start/End: Original strand, 32415224 - 32415280
Alignment:
Q  628 gggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||||| ||||||| ||||||||||||| | ||||||||||||||||    
T  32415224 gggaccaatttgagacaatttaaag-ttaagggaccaaattaaaatccaaaaataagt 32415280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 532 - 684
Target Start/End: Complemental strand, 35944080 - 35943928
Alignment:
Q  532 tctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggga 631  Q
    |||||||| || |||||| ||||||  ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  | | | |||||||||||    
T  35944080 tctatggtggatcacctataaagttggttcaccttagacatttaaagttaaaaactaacggagatgaccaaaatagtaaac-tgcataagatttatggga 35943982  T
Q  632 cc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    || |||||||||| ||| |   ||||||||||||||||||| ||||||||||||    
T  35943981 ccaaattgagacatttttataattaagggaccaaaatgaaaaccaaaaataagt 35943928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 531 - 671
Target Start/End: Original strand, 13366993 - 13367132
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||| || ||||| ||||||||| |||||||||||||||| || ||| ||||||||||    
T  13366993 gtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaacggagaggaccaaaatagtaaac-ggcagaagatttatggg 13367091  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaa 671  Q
    ||| |||| | ||| |||| | |||||||||||||| |||||    
T  13367092 accaaattaaaacactttata-gttaagggaccaaagtgaaa 13367132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 531 - 682
Target Start/End: Complemental strand, 36070351 - 36070201
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||| || ||| | |||||| || |||||||||||||||| || ||| ||||||||||    
T  36070351 gtctatggtggaccacctataaagttggttcaccttagacatttaaggtcaaagactaacggggaggaccaaaatagtaaac-ggcagaagatttatggg 36070253  T
Q  631 a-ccaattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    | | |||||||||| |||| | |||| ||||||||| ||||| ||||||||||    
T  36070252 atcaaattgagacactttata-gttaggggaccaaattgaaaaccaaaaataa 36070201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 534 - 684
Target Start/End: Original strand, 37324634 - 37324783
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc 633  Q
    |||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||||||  | ||||||||||||  ||  || ||||| || ||||    
T  37324634 tatggtggaccacctataaagttggttcaccttagacatttaaagtgaaaaattaacggagagaaacaaaatagtaaa-tggtcgaagatttttgagacc 37324732  T
Q  634 -aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
     |||||||||| |||| | |||| ||||||||| | ||| ||||||||||||    
T  37324733 aaattgagacattttata-gttaggggaccaaattaaaaaccaaaaataagt 37324783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 684
Target Start/End: Complemental strand, 44606312 - 44606160
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||| || ||||| ||| ||||| || ||||||| |||||  ||||| ||||||||||    
T  44606312 gtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaatggagaggatcaaaataataaac-agaagaagatttatggg 44606214  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||| |||||| ||| | || | |||| ||||||||| ||||| ||||||||||||    
T  44606213 accaaattgaaacactatata-gttaggggaccaaagtgaaaaccaaaaataagt 44606160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 37275010 - 37274908
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| |||||||||||||||||| | || ||||||||||| ||| |||||||| |||| || |||  ||||||||||||||||||||||    
T  37275010 aaaaactaacggagaggaccaaaatagtaaacggca-gaagatttatgggaacaaattgagacactttatag-ttagaggaccaaaatgaaatccaaaaa 37274913  T
Q  680 taagt 684  Q
    |||||    
T  37274912 taagt 37274908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 684
Target Start/End: Original strand, 16363783 - 16363907
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggga-ccaattgagacagtttaaaggttaag 657  Q
    ||||||||||||||||||||| || || ||||||||| ||||||||||||||||  | ||| ||||||||||| | |||||||| | |||| | ||||      
T  16363783 ttcaccttagacatttaaagttaataactaacggagaggaccaaaatagtaaac-agcagacgatttatgggatcaaattgagatactttata-gttaga 16363880  T
Q  658 ggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||| ||||| ||||||||||||    
T  16363881 ggaccaaagtgaaaaccaaaaataagt 16363907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 24069389 - 24069541
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||| || |||  | |||||||||||||||  || |||||   ||||| | ||||||||| |||||||| | || || |||||||    
T  24069389 gtctatggtggaccacctataatgttggtccaccttagacatttagtgttaaaaacagacggaaaggaccaaaatggtaaacggca-gaagagttatggg 24069487  T
Q  631 accaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||| |||||||| |||| || |||||||| |||||||||| ||||||||||||    
T  24069488 accaaattgagacactttatag-ttaagggatcaaaatgaaaaccaaaaataagt 24069541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 559 - 682
Target Start/End: Complemental strand, 7486222 - 7486100
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaag 657  Q
    ||||| |||||||||| | || ||||| ||||||||| |||||||||||||||| | || | ||||||||||||| ||||||  || |||| | ||||||    
T  7486222 ttcactttagacatttgatgttaaaaactaacggagaggaccaaaatagtaaacagcaa-aagatttatgggaccaaattgaagcactttata-gttaag 7486125  T
Q  658 ggaccaaaatgaaatccaaaaataa 682  Q
    ||| |||||||||| ||||||||||    
T  7486124 ggatcaaaatgaaaaccaaaaataa 7486100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 24068453 - 24068351
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| ||||||| |||||||||| | || || |||||||||||| |||||||| |||| || ||| ||||||||||||||| |||||||    
T  24068453 aaaaactaacggagaggaccaaattagtaaacgg-aggaagacttatgggaccaaattgagacactttatag-ttaggggaccaaaatgaaaaccaaaaa 24068356  T
Q  680 taagt 684  Q
    |||||    
T  24068355 taagt 24068351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 684
Target Start/End: Complemental strand, 3237534 - 3237439
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||| |||| |||||| |||||||| | ||  |||||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  3237534 taacggaaatgatcaaaattgtaaacggca-gaatatttatgggaccaaattgagacagtttaaag-ttaggggaccaaa-tgaaatccaaaaataagt 3237439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 684
Target Start/End: Complemental strand, 19913665 - 19913513
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||| ||| ||||||  ||||||||||| |||||| || ||||| ||||||||| |||||||||  |||||  | ||| || |||||||    
T  19913665 gtctatggtggaccatctataaagttggttcaccttagaaatttaaggttaaaaactaacggagaggaccaaaatgataaac-cgcagaagacttatggg 19913567  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||| |||||| ||| |||| | ||||  |||||||| |||||| |||||||||||    
T  19913566 accaaattgaaacactttata-gttagaggaccaaattgaaattcaaaaataagt 19913513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 613
Target Start/End: Complemental strand, 20308750 - 20308696
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||||||||||||||||| || ||||||||| ||| |||||||||||||||||||    
T  20308750 ttcaccttagacatttaaggttaaaaattaatggaaatgaccaaaatagtaaacg 20308696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 613
Target Start/End: Complemental strand, 21095383 - 21095329
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||||||||||||||||| || ||||||||| ||| |||||||||||||||||||    
T  21095383 ttcaccttagacatttaaggttaaaaattaatggaaatgaccaaaatagtaaacg 21095329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 31625383 - 31625479
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||||| || | ||||||||||||| |||||||||| |||| |  ||| ||||||||| ||||| ||||||||||||    
T  31625383 taacggagaggaccaaaatagtaaacggcaa-aagatttatgggaccaaattgagacactttata-attaggggaccaaattgaaaaccaaaaataagt 31625479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 534 - 635
Target Start/End: Complemental strand, 8395165 - 8395065
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc 633  Q
    |||||| ||||||||||||||||  ||||  |||  ||||||| || ||||| ||||||||| ||||||||| |||||| |||||| || ||||||||||    
T  8395165 tatggtggaccacctacaaagttggttcattttaaccatttaaggttaaaaactaacggagaggaccaaaatggtaaac-ggaagaagaattatgggacc 8395067  T
Q  634 aa 635  Q
    ||    
T  8395066 aa 8395065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 15989225 - 15989165
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  15989225 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 15989165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 21552003 - 21551943
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  21552003 ttatgggaccaaattgagatagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 21551943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 21553049 - 21552989
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||||||| |||||||||||    
T  21553049 ttatgggaccaaattgagatagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 21552989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 30865160 - 30865220
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  30865160 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 30865220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 36940026 - 36940128
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    |||||||||||||||||||||||||||||||| || ||| ||||||||  ||| |||||| ||| |||| | |||| |||| |||| ||||| |||||||    
T  36940026 aaaaattaacggagatgaccaaaatagtaaac-ggcagaagatttatgataccaaattgaaacactttata-gttaggggatcaaagtgaaaaccaaaaa 36940123  T
Q  680 taagt 684  Q
    |||||    
T  36940124 taagt 36940128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 558 - 613
Target Start/End: Complemental strand, 36756210 - 36756155
Alignment:
Q  558 attcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||||||||||| |||| | || ||||| |||||||||||||||||||||||||||    
T  36756210 attcaccttagaaatttgatgttaaaaactaacggagatgaccaaaatagtaaacg 36756155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 40102912 - 40102854
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||    
T  40102912 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataa 40102854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 684
Target Start/End: Complemental strand, 117221 - 117069
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||  |||  | | ||||||||||||||| | || ||||| ||||||||| |||||||| | ||||||  | || ||||||||||    
T  117221 gtctatggtggaccacctttaaacatgactcaccttagacatttgatgttaaaaactaacggagaggaccaaaacaataaacgaca-gaagatttatggg 117123  T
Q  631 accaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    | ||| |||| ||| |||| |  ||| ||||||||||||||| ||||||||||||    
T  117122 atcaaattgaaacattttataa-ttaggggaccaaaatgaaaaccaaaaataagt 117069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 3272071 - 3272120
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  3272071 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 3272120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 29441686 - 29441637
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  29441686 aattgagacagtttaaag-ttaagggaccaaaataaaattcaaaaataagt 29441637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 3271241 - 3271181
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||||||    
T  3271241 ttatgggaccaaattgagacgatttaaag-ttaagggaccaaaatgaaattcaaaaataagt 3271181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 3612545 - 3612485
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  3612545 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaatttaaaaataagt 3612485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 4675833 - 4675773
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||| |||| |||||||||||    
T  4675833 ttatgggaccaaattgagacaatttaaag-ttaagggaccaaaataaaattcaaaaataagt 4675773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 4675913 - 4675973
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||| |||| |||||||||||    
T  4675913 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaataaaattcaaaaataagt 4675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 684
Target Start/End: Complemental strand, 7561876 - 7561820
Alignment:
Q  628 gggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  7561876 gggaccaatttgagacaatttaaag-ttaagggaccaaattgaaatccaaaaataagt 7561820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 613
Target Start/End: Complemental strand, 8095506 - 8095437
Alignment:
Q  544 cacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||||| ||||||  ||||||||||||||||||  | ||||| ||||||| | |||||||||||||||||    
T  8095506 cacctataaagttggttcaccttagacatttaagattaaaaactaacggaaaggaccaaaatagtaaacg 8095437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 15989085 - 15989025
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  15989085 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaatttaaaaataagt 15989025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 15989305 - 15989365
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||| ||||| |||||||||||    
T  15989305 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaacgaaattcaaaaataagt 15989365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 684
Target Start/End: Original strand, 19914906 - 19915001
Alignment:
Q  588 aacggagatgaccaaaatagtaaacgggaagaggatttatggg-accaattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||| ||||||||||| |||||||| | || |||||||||| || |||||||||| |||| || ||||||||||||| ||||| || |||||||||    
T  19914906 aacggatatgaccaaaatggtaaacggta-gaagatttatgggtacaaattgagacactttatag-ttaagggaccaaattgaaaacccaaaataagt 19915001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 40102973 - 40103033
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||||||||| |||||||||||    
T  40102973 ttatgggaccaaattgagacggtttaaag-ttaagggactaaaatgaaattcaaaaataagt 40103033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 531 - 635
Target Start/End: Original strand, 2421236 - 2421339
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||| | ||||| ||| ||||||  |||||||||||||||||| || ||||| ||||  ||| |||||||||| ||||| || ||| ||||| ||||    
T  2421236 gtctatgatggaccatctataaagttggttcaccttagacatttaaggttaaaaactaacaaagaggaccaaaataataaac-ggcagaagatttctggg 2421334  T
Q  631 accaa 635  Q
    |||||    
T  2421335 accaa 2421339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 682
Target Start/End: Original strand, 37276214 - 37276336
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaag 657  Q
    |||||||||||| ||| | || ||||| |||| |||| |||||| ||| ||||||| || | ||||||||||||| |||||||||| |||| | ||||||    
T  37276214 ttcaccttagacttttgatgttaaaaactaacagagaggaccaatataataaacggcaa-aagatttatgggaccaaattgagacactttata-gttaag 37276311  T
Q  658 ggaccaaaatgaaatccaaaaataa 682  Q
    ||| |||| |||||  |||||||||    
T  37276312 ggatcaaagtgaaaatcaaaaataa 37276336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 682
Target Start/End: Original strand, 29739643 - 29739736
Alignment:
Q  588 aacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||| ||||||||||| |||||| ||||||  |||||||||||| |||||||||| |||| | |||| |||| |||| ||||| ||||||||||    
T  29739643 aacggacatgaccaaaatggtaaac-ggaagaaaatttatgggaccaaattgagacactttata-gttaggggatcaaattgaaaaccaaaaataa 29739736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 614
Target Start/End: Complemental strand, 39220824 - 39220769
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    |||||||||||||||||| || ||||| |||| ||||| || ||||||||||||||    
T  39220824 ttcaccttagacatttaaggttaaaaactaacagagataacgaaaatagtaaacgg 39220769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 8502320 - 8502369
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  8502320 aattgagacagtttaaag-ttaggggaccaaattgaaattcaaaaataagt 8502369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 21552095 - 21552144
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| ||||||||||||||| |||| |||||||||||    
T  21552095 aattgagacggtttaaag-ttaagggaccaaaataaaattcaaaaataagt 21552144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 21553141 - 21553190
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| ||||||||||||||| |||| |||||||||||    
T  21553141 aattgagacggtttaaag-ttaagggaccaaaataaaattcaaaaataagt 21553190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 684
Target Start/End: Original strand, 38591010 - 38591102
Alignment:
Q  591 ggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||| |||||||||||||||| || | | ||||||||||||| |||||||||| |||| | |||| ||||||||| |||||  |||||||||||    
T  38591010 ggagaggaccaaaatagtaaac-ggcataagatttatgggaccaaattgagacactttata-gttaggggaccaaattgaaaatcaaaaataagt 38591102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 39349485 - 39349534
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||  |||||||| |||||||||||||||||||| |||||||||||    
T  39349485 aattgagatggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 39349534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 41178716 - 41178765
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  41178716 aattgagacagtttaaag-ttaggggaccaaattgaaattcaaaaataagt 41178765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 3271979 - 3271919
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||  |||||||| ||||||||||| |||||||||||    
T  3271979 ttatgggaccaaattgagacggtttaaaa-ttaagggatcaaaatgaaattcaaaaataagt 3271919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 3612618 - 3612678
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||| ||||||| ||||| ||||||||| |||| |||||||||||    
T  3612618 ttatgggaccaaattgagacaatttaaag-ttaagagaccaaaataaaattcaaaaataagt 3612678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 628 - 684
Target Start/End: Original strand, 7565325 - 7565381
Alignment:
Q  628 gggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||||| ||||||| ||||||||||||| | ||||||||||||||||    
T  7565325 gggaccaatttgagacaatttaaag-ttaagggaccaaattaaaatccaaaaataagt 7565381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 628 - 684
Target Start/End: Complemental strand, 24703285 - 24703230
Alignment:
Q  628 gggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||||| ||||||| |||||| |||||||||||||||||||||||||    
T  24703285 gggaccaatttgagacaatttaaag-ttaagg-accaaaatgaaatccaaaaataagt 24703230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 639 - 684
Target Start/End: Original strand, 24706263 - 24706307
Alignment:
Q  639 agacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  24706263 agacaatttaaag-ttaagagaccaaaatgaaatccaaaaataagt 24706307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 30864490 - 30864550
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||  |||||||| ||||||||||| |||||||||||    
T  30864490 ttatgggaccaaattgagacggtttaaaa-ttaagggatcaaaatgaaattcaaaaataagt 30864550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 40102302 - 40102242
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||  |||||||| |||| ||||||||||||||| |||||||||||    
T  40102302 ttatgggaccaaattgagatggtttaaag-ttaaaggaccaaaatgaaattcaaaaataagt 40102242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 565 - 614
Target Start/End: Complemental strand, 45194622 - 45194573
Alignment:
Q  565 ttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    |||||||||||| |  ||||||||| |||||||| |||||||||||||||    
T  45194622 ttagacatttaaggctaaaaattaatggagatgatcaaaatagtaaacgg 45194573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 1259792 - 1259760
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||||| ||||||||||    
T  1259792 gttaagggaccaaaatgaaatcaaaaaataagt 1259760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 3271332 - 3271379
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    ||||||||| |||||||| ||||| |||||||||||||| |||||||||    
T  3271332 aattgagacggtttaaag-ttaagagaccaaaatgaaattcaaaaataa 3271379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 12850172 - 12850140
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||| ||||||||||||    
T  12850172 gttaagggaccaaaatgaaacccaaaaataagt 12850140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 682
Target Start/End: Complemental strand, 14433692 - 14433645
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    ||||||||||||||||| |||| ||||||||| |||||| |||||||||    
T  14433692 aattgagacagtttaaa-gttaggggaccaaattgaaattcaaaaataa 14433645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 21524485 - 21524453
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||||| ||||||||||    
T  21524485 gttaagggaccaaaatgaaatcaaaaaataagt 21524453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 625 - 684
Target Start/End: Original strand, 21553744 - 21553803
Alignment:
Q  625 tatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||| |||||||  ||||||| ||| |||||||||||||||| |||||||||||    
T  21553744 tatgggaccaaattgagacgatttaaag-ttatgggaccaaaatgaaattcaaaaataagt 21553803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 35103428 - 35103396
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||||| ||||||||||    
T  35103428 gttaagggaccaaaatgaaatcaaaaaataagt 35103396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 635
Target Start/End: Complemental strand, 36938826 - 36938751
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa 635  Q
    ||||| ||||| |||| | || |||||||||| |||| |||||||||||||||| || ||| |||||||| ||||||    
T  36938826 ttcactttagatatttgatgttaaaaattaacagagaagaccaaaatagtaaac-ggcagaagatttatgagaccaa 36938751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 531 - 607
Target Start/End: Complemental strand, 45384413 - 45384337
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatag 607  Q
    |||||||||||||||||| ||| |||  | ||||||||| |||||  || ||||  ||||||| |||||||||||||    
T  45384413 gtctatggtagaccacctgcaatgttgttacaccttagatatttatggttaaaatgtaacggatatgaccaaaatag 45384337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 531 - 680
Target Start/End: Original strand, 46458656 - 46458804
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||| ||||| ||||||  |||||||||||||||||| || |||||  |||||||| ||||||||| |||||| |||||| ||||||||||    
T  46458656 gtctatggtggactacctataaagttggttcaccttagacatttaaggttaaaaacaaacggagaggaccaaaatggtaaac-ggaagaagatttatggg 46458754  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaat 680  Q
    ||| |||||||||| |||| | |||||||||||||| |||||  |||||||    
T  46458755 accaaattgagacactttata-gttaagggaccaaattgaaaatcaaaaat 46458804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 532 - 614
Target Start/End: Complemental strand, 26406297 - 26406215
Alignment:
Q  532 tctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    |||||||| ||||||||||||||||  |||||||||||||||||| || ||||| |||||||||||||||||||  |||||||    
T  26406297 tctatggtggaccacctacaaagttggttcaccttagacatttaaggttaaaaaataacggagatgaccaaaatgttaaacgg 26406215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 535 - 684
Target Start/End: Original strand, 33459490 - 33459638
Alignment:
Q  535 atggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc- 633  Q
    ||||||||||||||||||||||  ||||||||||||| |||| || ||||| |||| || | ||||| | |||||||| ||| || || ||||||||||     
T  33459490 atggtagaccacctacaaagttggttcaccttagacagttaaggttaaaaactaacagaaaagaccacattagtaaac-ggaggaagacttatgggacca 33459588  T
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||| | ||||  |||||||||||||| ||||||||||||    
T  33459589 aattgagacactttata-gttagaggaccaaaatgaaaaccaaaaataagt 33459638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 590 - 684
Target Start/End: Complemental strand, 36702891 - 36702798
Alignment:
Q  590 cggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||| |||| ||||||||||||||| | ||  |||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  36702891 cggaaatgatcaaaatagtaaacggca-gaatatttatgggaccaaattgagacagtttaaag-ttaagggaccaaaatgaaatctaaaaataagt 36702798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 561 - 684
Target Start/End: Complemental strand, 43930462 - 43930340
Alignment:
Q  561 caccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaaggg 659  Q
    |||||||||||||||| || |||||||||| |||| |||||||||||||||| |  ||| ||||||| ||||| ||||||||| ||||||  |||| |||    
T  43930462 caccttagacatttaaggttaaaaattaacagagaggaccaaaatagtaaac-gacagaagatttataggaccaaattgagac-gtttaatagttagggg 43930365  T
Q  660 accaaaatgaaatccaaaaataagt 684  Q
    |||||| |||||  |||||||||||    
T  43930364 accaaagtgaaaatcaaaaataagt 43930340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 534 - 684
Target Start/End: Original strand, 25154882 - 25155031
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggga-c 632  Q
    |||||| |||||| || ||||||  |||||||||||||||||| || |||||  ||||||||||||||||||  |||||  ||||| |||||||| ||      
T  25154882 tatggtggaccacttataaagttggttcaccttagacatttaaggttaaaaacaaacggagatgaccaaaatgataaac-agaagaagatttatgagatt 25154980  T
Q  633 caattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
     |||||||||| |||| | ||||||||| |||| ||||| ||||||||||||    
T  25154981 aaattgagacactttata-gttaagggatcaaattgaaaaccaaaaataagt 25155031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 587 - 684
Target Start/End: Complemental strand, 19278470 - 19278374
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||| ||| |||||||||||||||||| | || || |||||||||||| |||||||| |||| |  ||||||||||||||||||||||||||||||||    
T  19278470 taacgaagaggaccaaaatagtaaacggca-gaagaattatgggaccaaattgagacactttataa-ttaagggaccaaaatgaaatccaaaaataagt 19278374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 534 - 635
Target Start/End: Original strand, 131945 - 132045
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc 633  Q
    |||||||| |||| |||||||||  |||||||||||||||||| || ||||| |||||||||||| || | |||||||| ||| || || ||||||||||    
T  131945 tatggtagtccacttacaaagttggttcaccttagacatttaaggttaaaaactaacggagatgatcacattagtaaac-ggaggaagacttatgggacc 132043  T
Q  634 aa 635  Q
    ||    
T  132044 aa 132045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 587 - 684
Target Start/End: Complemental strand, 33458426 - 33458331
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| ||||| | |||||||||| |||| || ||||||||| |||||||||| |||| || |||| |||||||||||||| ||||||||||||    
T  33458426 taacggagaggaccacattagtaaacgg-aagaagacttatgggactaattgagacactttatag-ttaaaggaccaaaatgaaaaccaaaaataagt 33458331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 47809621 - 47809681
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  47809621 ttatgggaccaaattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 47809681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 559 - 682
Target Start/End: Complemental strand, 38406163 - 38406041
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacca-attgagacagtttaaaggttaag 657  Q
    |||||||||||||||| | || ||||||||||||| | |||||||| ||||||| |  ||| ||||||||| ||||  |||||||| |||| | |||| |    
T  38406163 ttcaccttagacatttgatgttaaaaattaacggaaaggaccaaaacagtaaac-gtcagaagatttatggaaccagtttgagacactttata-gttagg 38406066  T
Q  658 ggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||||| ||||||||||    
T  38406065 ggaccaaaatgaaaaccaaaaataa 38406041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 622 - 684
Target Start/End: Original strand, 19848867 - 19848929
Alignment:
Q  622 atttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||    
T  19848867 atttatgggaccaaattgagacactttatag-ttaagggaccaaaatgaaatccaaaaataagt 19848929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 684
Target Start/End: Complemental strand, 4857346 - 4857222
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaag 657  Q
    |||||||||||||||| | || ||||| ||||||||| ||| |||| ||||||| || ||| ||||| ||||||| ||| |||||| |||| | |||| |    
T  4857346 ttcaccttagacatttgatgttaaaaactaacggagaggactaaaacagtaaac-ggcagaagatttgtgggaccaaatcgagacattttata-gttagg 4857249  T
Q  658 ggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||| ||||| ||||||||||||    
T  4857248 ggaccaaagtgaaaaccaaaaataagt 4857222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 29754732 - 29754781
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  29754732 aattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 29754781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 41516287 - 41516439
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    |||||||||| | |||||||||||||| | ||||||||||||||||  | ||||| |||| || ||||||| | || ||||| ||||||  | |||||||    
T  41516287 gtctatggtataacacctacaaagttagtccaccttagacatttaagattaaaaactaacagaaatgaccacattactaaac-ggaagaatacttatggg 41516385  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||| |||| ||||| |||| | |||| ||||||||||| ||| | ||||||||||    
T  41516386 accaaattaagacactttata-gttaggggaccaaaattaaaacaaaaaataagt 41516439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 46674933 - 46675029
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||||| || | ||||||||||||| ||| |||||| |||| | ||||||||| |||| ||||| ||||||||||||    
T  46674933 taacggagaggaccaaaatagtaaacggcaa-aagatttatgggaccaaatcgagacactttata-gttaagggatcaaattgaaaaccaaaaataagt 46675029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 32610845 - 32610905
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  32610845 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 32610905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 587 - 679
Target Start/End: Original strand, 36702949 - 36703040
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||||| | |||||||||||||||| || |||  |||||||||||| |||||||||||||||||  ||| ||||| |||||||||||||||||    
T  36702949 taacggaaaggaccaaaatagtaaac-ggcagaatatttatgggaccaaattgagacagtttaaa-tttaggggactaaaatgaaatccaaaaa 36703040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 37375129 - 37375189
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  37375129 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 37375189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 43704689 - 43704629
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  43704689 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 43704629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 632 - 684
Target Start/End: Original strand, 3699791 - 3699842
Alignment:
Q  632 ccaattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  3699791 ccaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 3699842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 6772901 - 6772948
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||    
T  6772901 aattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataa 6772948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 8439938 - 8439987
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  8439938 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 8439987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 29754630 - 29754581
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  29754630 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 29754581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 427 - 489
Target Start/End: Original strand, 33459382 - 33459444
Alignment:
Q  427 ttaggtgattgcggtttattataagttaaagtagatccctctatgatctaataatcttcattt 489  Q
    ||||||| ||| |||||||||||||||||| |||||| |||||||||| || |||||| ||||    
T  33459382 ttaggtggttgtggtttattataagttaaaatagatctctctatgatccaacaatcttaattt 33459444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 37373604 - 37373555
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  37373604 aattgagacagtttaaag-ttaaggtaccaaaatgaaattcaaaaataagt 37373555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 595 - 684
Target Start/End: Complemental strand, 46457179 - 46457091
Alignment:
Q  595 atgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||| ||||| || |||| ||||||||||||||| |||||||| |||| || |||||||| |||| ||||| ||||||||||||    
T  46457179 atgaccaaaatggtaaatgg-aagaagatttatgggaccaaattgagacactttatag-ttaagggatcaaattgaaaaccaaaaataagt 46457091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 581 - 682
Target Start/End: Complemental strand, 47163276 - 47163176
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| |||||||||||||||||| || || |||||||||||||| || || || |||| || |||  |||||||||| |||||||||||    
T  47163276 aaaaactaacggagaggaccaaaatagtaaacggaaaaag-atttatgggaccaaattaaggcactttatag-ttagaggaccaaaataaaatccaaaaa 47163179  T
Q  680 taa 682  Q
    |||    
T  47163178 taa 47163176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 47810185 - 47810234
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| |||||||||||||||| ||| |||||||||||    
T  47810185 aattgagacagtttaaag-ttaagggaccaaaatgtaattcaaaaataagt 47810234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 8439847 - 8439787
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||||||||| |  |||||||||||||||||||| |||||||||||    
T  8439847 ttatgggaccaaattgagacagtttacaa-ttaagggaccaaaatgaaattcaaaaataagt 8439787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 10338348 - 10338408
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||  |||||||| |||||||||||||||||||| |||||||||||    
T  10338348 ttatgggaccaaattgagatggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 10338408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 684
Target Start/End: Original strand, 18670542 - 18670598
Alignment:
Q  628 gggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  18670542 gggaccaatttgagacattttaaag-ttaagggaccaaaataaaatccaaaaataagt 18670598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 576
Target Start/End: Complemental strand, 28325245 - 28325200
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaa 576  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||    
T  28325245 gtctatggtagaccacctacaaagttggtccaccttagacatttaa 28325200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 32610765 - 32610705
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  32610765 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 32610705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 33228928 - 33228868
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||| ||||||||  |||||||||||||||||||| |||||||||||    
T  33228928 ttatgggaccaaattgagatagtttaaaa-ttaagggaccaaaatgaaattcaaaaataagt 33228868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 33229008 - 33229068
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||| ||||||||||||||| |||||||||||    
T  33229008 ttatgggaccaaattgagacggtttaaag-ttaaaggaccaaaatgaaattcaaaaataagt 33229068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 35087917 - 35087857
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||| || |||||||||||    
T  35087917 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgagattcaaaaataagt 35087857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 37373694 - 37373754
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||||||    
T  37373694 ttatgggaccaaattgagacgatttaaag-ttaagggaccaaaatgaaattcaaaaataagt 37373754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 40501399 - 40501459
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||  |||||||||||||||||||| |||||||||||    
T  40501399 ttatgggaccaaattgagacggtttaaaa-ttaagggaccaaaatgaaattcaaaaataagt 40501459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 40501490 - 40501550
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||  |||||||||||||||||||| |||||||||||    
T  40501490 ttatgggaccaaattgagacggtttaaaa-ttaagggaccaaaatgaaattcaaaaataagt 40501550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 601 - 684
Target Start/End: Complemental strand, 43935288 - 43935206
Alignment:
Q  601 aaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||| | || |||||||| |||||| |||||||| |||| || |||  |||||||||||||||||||||||||||    
T  43935288 aaaatagtaaacggca-gaagatttatgagaccaaattgagacactttatag-ttagaggaccaaaatgaaatccaaaaataagt 43935206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 684
Target Start/End: Complemental strand, 18801298 - 18801236
Alignment:
Q  622 atttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||| |||||||| |||| || ||| |||||||||||||||| |||||||||||    
T  18801298 atttatgggaccaaattgagacactttatag-ttaggggaccaaaatgaaattcaaaaataagt 18801236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 684
Target Start/End: Original strand, 35087430 - 35087492
Alignment:
Q  622 atttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||| ||||||| |||||||| |||| ||| ||||||||||| |||||||||||    
T  35087430 atttatgggaccaaattgagacggtttaaag-ttaaaggatcaaaatgaaattcaaaaataagt 35087492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 47809571 - 47809513
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||    
T  47809571 ttatgggaccaaattgagacggtttaaag-ttaaggaaccaaaatgaaattcaaaaataa 47809513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 1904066 - 1904115
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| | ||||||| ||||||||||||||||||    
T  1904066 aattgagacagtttaaag-ttaggagaccaaattgaaatccaaaaataagt 1904115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 4229166 - 4229117
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  4229166 aattgagacggtttaaag-ttaagggaccaaaatgaaattaaaaaataagt 4229117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 613
Target Start/End: Complemental strand, 10256296 - 10256214
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||| ||| ||||| ||||||  |||||||||||| ||||| || ||||||||   || |||||||||||| ||||||    
T  10256296 gtctatggtggactacctataaagttggttcaccttagacttttaaggttaaaaattactagaaatgaccaaaatactaaacg 10256214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 21171532 - 21171581
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||    
T  21171532 aattgagacaatttaaag-ttaggggaccaaattgaaatccaaaaataagt 21171581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 613
Target Start/End: Original strand, 27899185 - 27899239
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||||| |||||| || ||||| ||||||| | |||||||||||||||||    
T  27899185 ttcaccttagatatttaaggttaaaaactaacggataagaccaaaatagtaaacg 27899239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 43705588 - 43705637
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  43705588 aattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 43705637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 6772809 - 6772749
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||| ||||||||||| ||| |||||||||||    
T  6772809 ttatgggaccaaattgagacggtttaaag-ttaaaggaccaaaatggaattcaaaaataagt 6772749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 612
Target Start/End: Original strand, 13286965 - 13287018
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaac 612  Q
    |||| ||||||||||||| || ||||| ||||| ||| ||||||||||||||||    
T  13286965 ttcatcttagacatttaaggttaaaaactaacgaagaggaccaaaatagtaaac 13287018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 33229488 - 33229428
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| |||||| |||| |||||||||||    
T  33229488 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaataaaattcaaaaataagt 33229428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 37374717 - 37374657
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| |||||| |||| |||||||||||    
T  37374717 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaataaaattcaaaaataagt 37374657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 47810094 - 47810034
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| |||||| |||| |||||||||||    
T  47810094 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaataaaattcaaaaataagt 47810034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 14107885 - 14107853
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||| ||||||||||||    
T  14107885 gttaagggaccaaaatgaaaaccaaaaataagt 14107853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 14417842 - 14417810
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||| ||||||||||||    
T  14417842 gttaagggaccaaaatgaaaaccaaaaataagt 14417810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Original strand, 19105599 - 19105631
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||||| ||||||||||    
T  19105599 gttaagggaccaaaatgaaatcaaaaaataagt 19105631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 33229579 - 33229626
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||| ||||||||  |||||||||||||||||||| |||||||||    
T  33229579 aattgagatagtttaaaa-ttaagggaccaaaatgaaattcaaaaataa 33229626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 37725932 - 37725900
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||||||||| |||||||||||    
T  37725932 gttaagggaccaaaatgaaattcaaaaataagt 37725900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 40926512 - 40926614
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    |||| |||||||||| ||||||||  |||||||| | ||  |||||| ||||||| |||||||| |||| || ||| ||||||||| ||||| |||||||    
T  40926512 aaaagttaacggagaggaccaaaacggtaaacggta-gaaaatttataggaccaaattgagacactttatag-ttaggggaccaaagtgaaaaccaaaaa 40926609  T
Q  680 taagt 684  Q
    |||||    
T  40926610 taagt 40926614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 544 - 684
Target Start/End: Complemental strand, 7037126 - 7036987
Alignment:
Q  544 cacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagac 642  Q
    |||||| |||||| |||||||||||| |||||| || |||||| |||||| ||||||||||| |||||| || ||| || |||||||||| |||||| ||    
T  7037126 cacctataaagttgattcaccttagatatttaaggttaaaaataaacggaaatgaccaaaatggtaaac-ggcagaagacttatgggaccaaattgaaac 7037028  T
Q  643 agtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    | |||| | |||||||||| ||| ||||||||||||||||||    
T  7037027 actttata-gttaagggactaaagtgaaatccaaaaataagt 7036987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 531 - 665
Target Start/End: Complemental strand, 14509382 - 14509249
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||| ||||||  || ||||||||||||||| || ||||||||||||||| |||||||||||||||| |  ||| ||||||||||    
T  14509382 gtctatggtggaccacctataaagttggtttaccttagacatttaaggttaaaaattaacggagaggaccaaaatagtaaac-gacagaagatttatggg 14509284  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaa 665  Q
    ||| |||| | ||| |||| | ||||||||||||||    
T  14509283 accgaattaaaacactttata-gttaagggaccaaa 14509249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 6707049 - 6706947
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||  |||||||||||||||||| |||| ||||||||| ||||| |||||||| |||| || ||| |||||||||||||||||||||||    
T  6707049 aaaaactaacggaggggaccaaaatagtaaacgg-aagaagatttatggaaccaaattgagacactttatag-ttaggggaccaaaatgaaatccaaaaa 6706952  T
Q  680 taagt 684  Q
    |||||    
T  6706951 taagt 6706947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 684
Target Start/End: Complemental strand, 12853031 - 12852907
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaag 657  Q
    |||||||||||  ||| | || ||||  |||||||||||||||||||||||||| |  ||| ||||||||||||| |||||||||| |||| | |||| |    
T  12853031 ttcaccttagatttttgatgttaaaatctaacggagatgaccaaaatagtaaac-gatagaagatttatgggaccaaattgagacactttata-gttagg 12852934  T
Q  658 ggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||||||||| |||||    
T  12852933 ggaccaaaatgaaatccaaaagtaagt 12852907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 531 - 684
Target Start/End: Complemental strand, 35799685 - 35799533
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    |||||||||||||||| || |||||| ||||||||||||||||||| || ||||  ||||||||| |||||||   |||||| ||||||  | ||||| |    
T  35799685 gtctatggtagaccacttataaagttgattcaccttagacatttaaggttaaaagctaacggagaggaccaaagaggtaaac-ggaagaaaagttatgag 35799587  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||| |||||||||| |||| | |||| ||||| ||| ||||| ||||||||||||    
T  35799586 accaaattgagacactttata-gttaggggactaaattgaaaaccaaaaataagt 35799533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 535 - 612
Target Start/End: Original strand, 28109816 - 28109893
Alignment:
Q  535 atggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaac 612  Q
    ||||| ||||||||||||||||  |||||||||||||||||| || ||||| ||||||||| ||||||||| ||||||    
T  28109816 atggtggaccacctacaaagttggttcaccttagacatttaaggttaaaaaataacggagaggaccaaaatggtaaac 28109893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 43015620 - 43015560
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  43015620 ttatgggaccaaattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 43015560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 682
Target Start/End: Complemental strand, 23177797 - 23177696
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| ||||||||| |||||||| | || ||||||||||||||| |||||||| |||| || |   ||||||||||||||| |||||||    
T  23177797 aaaaactaacggagaggaccaaaatggtaaacggca-gaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaa 23177699  T
Q  680 taa 682  Q
    |||    
T  23177698 taa 23177696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 682
Target Start/End: Complemental strand, 23589054 - 23588953
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| ||||||||| |||||||| | || ||||||||||||||| |||||||| |||| || |   ||||||||||||||| |||||||    
T  23589054 aaaaactaacggagaggaccaaaatggtaaacggca-gaagatttatgggaccaaattgagacactttatagttagggggaccaaaatgaaaaccaaaaa 23588956  T
Q  680 taa 682  Q
    |||    
T  23588955 taa 23588953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 5435240 - 5435180
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  5435240 ttatgggaccaaattgagacagtttaaag-ttaagggaccaaaatgaaattcaaatataagt 5435180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 7038367 - 7038427
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||    
T  7038367 ttatgggaccaaattgagacactttatag-ttaagggaccaaaatgaaatccaaaaataagt 7038427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 15816701 - 15816761
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  15816701 ttatgggaccaaattgagacagtttaaag-ttaagggacgaaaatgaaattcaaaaataagt 15816761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 17859301 - 17859361
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||    
T  17859301 ttatgggaccaaattgagacagtttaacg-ttaagggaccaaaatgaaattcaaaaataagt 17859361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 628 - 684
Target Start/End: Original strand, 21545108 - 21545164
Alignment:
Q  628 gggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||    
T  21545108 gggaccaatttgagacaatttaaag-ttaagggaccaaaatgaaatccaaaaataagt 21545164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 27262794 - 27262734
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  27262794 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 27262734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 27264608 - 27264668
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  27264608 ttatgggaccaaattgagacaatttaaag-ttaagggaccaaaatgaaattcaaaaataagt 27264668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 43019281 - 43019341
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  43019281 ttatgggaccaaattgagacaggttaaag-ttaagggaccaaaatgaaattcaaaaataagt 43019341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 684
Target Start/End: Original strand, 12854136 - 12854199
Alignment:
Q  621 gatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||| |||||||| |||| || ||||||||||||||||||||| ||||||||||    
T  12854136 gatttatgggaccaaattgagacactttatag-ttaagggaccaaaatgaaatctaaaaataagt 12854199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 611
Target Start/End: Original strand, 25570813 - 25570893
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaa 611  Q
    ||||||||| ||||||||| ||||||  ||||||||||||||||||  | ||||| ||||||| | ||| |||||||||||    
T  25570813 gtctatggtggaccacctataaagttggttcaccttagacatttaagtttaaaaactaacggaaaggactaaaatagtaaa 25570893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 613
Target Start/End: Complemental strand, 4829638 - 4829556
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||| ||||||||| ||||||  || |||||||| |||||| || ||| | |||| |||| |||||||||||||||||    
T  4829638 gtctatggtggaccacctataaagttggtttaccttagatatttaaggttaaacactaacagagaggaccaaaatagtaaacg 4829556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 648
Target Start/End: Original strand, 7490166 - 7490255
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagttta 648  Q
    |||||||||||||||||| || ||||| ||||||| | ||||||||||||||||   || | ||||||||||||| |||||||||| ||||    
T  7490166 ttcaccttagacatttaaggttaaaaactaacggataagaccaaaatagtaaacaataa-aagatttatgggaccaaattgagacatttta 7490255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 30202929 - 30202978
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  30202929 aattgagacagtttaaag-ttaggggaccaaattgaaatccaaaaataagt 30202978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 37868983 - 37869135
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    |||||| || ||||||||| ||||||   ||||||||||||||||| || |||||  |||||||| ||||||||  |||||| |  ||| || ||||| |    
T  37868983 gtctattgtggaccacctataaagttggctcaccttagacatttaaggttaaaaacaaacggagaagaccaaaaaggtaaac-gacagaagacttatgag 37869081  T
Q  631 ac-caattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||  |||||||||| |||| | |||||||||||||| |||||  |||||||||||    
T  37869082 actaaattgagacactttata-gttaagggaccaaattgaaaatcaaaaataagt 37869135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 15808161 - 15808101
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||| ||||||||| ||||||||| |||||||||| |||||||||||    
T  15808161 ttatgggaccaaattgagatagtttaaag-ttaagggactaaaatgaaattcaaaaataagt 15808101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 17858619 - 17858679
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  17858619 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 17858679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 628 - 680
Target Start/End: Complemental strand, 21541138 - 21541086
Alignment:
Q  628 gggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaat 680  Q
    |||||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  21541138 gggaccaatttgagacaatttaaag-ttaagggaccaaaatgaaatccaaaaat 21541086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 634 - 683
Target Start/End: Complemental strand, 22900264 - 22900216
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataag 683  Q
    |||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  22900264 aattgagacagtttaaag-ttaggggaccaaattgaaatccaaaaataag 22900216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 42772519 - 42772459
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  42772519 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 42772459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 531 - 607
Target Start/End: Complemental strand, 8537185 - 8537109
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatag 607  Q
    |||||||||  ||||| || ||||||  | || ||||||||||||| || ||||| |||||||||||||||||||||    
T  8537185 gtctatggtgaaccacttaaaaagttggtacatcttagacatttaaggttaaaaactaacggagatgaccaaaatag 8537109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 614
Target Start/End: Complemental strand, 10367412 - 10367329
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    |||||| || ||||||||| ||||||  |||||||||||||||||| || |||||  |||||||| ||| ||||  ||||||||    
T  10367412 gtctattgtggaccacctataaagttggttcaccttagacatttaaggttaaaaacaaacggagacgactaaaaaggtaaacgg 10367329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 605
Target Start/End: Original strand, 11575432 - 11575503
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaat 605  Q
    |||||| || |||||| |||||| ||||||||||||||||||| || |||||  |||||| | |||||||||    
T  11575432 tatggtggatcacctataaagttgattcaccttagacatttaaggttaaaaacaaacggaaaggaccaaaat 11575503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 682
Target Start/End: Original strand, 27657786 - 27657840
Alignment:
Q  628 gggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||    
T  27657786 gggaccaatttgagacaatttaaag-ttaagggaccaaaataaaatccaaaaataa 27657840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 12959648 - 12959800
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    |||||| || ||||||||| ||||||  |||||||||||||||||| || ||| |  |||||||| || |||||  |||||| || ||| ||||||| ||    
T  12959648 gtctattgtggaccacctataaagttggttcaccttagacatttaaggttaaagacaaacggagaggatcaaaaaggtaaac-ggcagaagatttatcgg 12959746  T
Q  631 ac-caattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||  |||||||||| ||| |  |||||||||||||| | |||  |||||||||||    
T  12959747 actaaattgagacacttt-attgttaagggaccaaattaaaaatcaaaaataagt 12959800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 17179297 - 17179346
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  17179297 aattgagacagtttaaag-ttaggggaccaaattgaaattcaaaaataagt 17179346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 20948472 - 20948423
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| ||||||| ||||||||||||| |||||| |||||||||||    
T  20948472 aattgagacaatttaaag-ttaagggaccaaattgaaattcaaaaataagt 20948423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 22653073 - 22653122
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||| | ||||||||||||||||||    
T  22653073 aattgagacagtttaaag-ttaggggaccatattgaaatccaaaaataagt 22653122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 42368343 - 42368403
Alignment:
Q  624 ttatgggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| | |||||| |||| || ||| ||||||||||||||||||||||||||||    
T  42368343 ttatgggaccaaatcgagacactttatag-ttaggggaccaaaatgaaatccaaaaataagt 42368403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 559 - 611
Target Start/End: Complemental strand, 3532339 - 3532287
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaa 611  Q
    ||||||||| |||||||| || |||||| ||| |||||||| |||||||||||    
T  3532339 ttcaccttaaacatttaatgttaaaaatcaacagagatgactaaaatagtaaa 3532287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 682
Target Start/End: Complemental strand, 17858528 - 17858481
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    ||||||||| |||||||| |||||||||||||| ||||| |||||||||    
T  17858528 aattgagacggtttaaag-ttaagggaccaaaacgaaattcaaaaataa 17858481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 581 - 613
Target Start/End: Original strand, 21012073 - 21012105
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||| |||||||||||||||||||||||||||    
T  21012073 aaaaactaacggagatgaccaaaatagtaaacg 21012105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 7e-20; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 11114923 - 11115075
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||| || ||||| ||||||||| | ||||||| |||||| |  ||| || |||||||    
T  11114923 gtctatggtagaccacctacaaagttggttcagcttagacatttaaggttaaaaactaacggagaggtccaaaatggtaaac-gacagaagagttatggg 11115021  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||| |||||||| | |||| | |||| ||||||||||||||| |  |||||||||    
T  11115022 accaaattgagatactttata-gttaggggaccaaaatgaaaactgaaaataagt 11115075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 535 - 684
Target Start/End: Complemental strand, 15787122 - 15786973
Alignment:
Q  535 atggtagaccacctacaaagttaatt-caccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc 633  Q
    ||||||||||||||||||||||   | |||||||||||||||| || ||||||||||||||| || || |||  ||||| || |||  | ||||||||||    
T  15787122 atggtagaccacctacaaagtttggtgcaccttagacatttaaggttaaaaattaacggagaggatcataatgataaac-ggcagaaaagttatgggacc 15787024  T
Q  634 -aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
     ||||||||||||||| | |||| |||| |||||||||| | ||||||||||    
T  15787023 aaattgagacagtttata-gttaggggaacaaaatgaaaacaaaaaataagt 15786973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 531 - 614
Target Start/End: Original strand, 38555219 - 38555302
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||  | ||||| ||||||| |||||||   ||||||||||    
T  38555219 gtctatggtagaccacctacaaagttggttcaccttagacatttaagattaaaaactaacggaaatgaccacgttagtaaacgg 38555302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 613
Target Start/End: Original strand, 6140303 - 6140385
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||| ||| ||||| ||||||  ||||||||||| |||||| || ||||| ||||||| |||||||||||||||||||    
T  6140303 gtctatggtggactacctataaagttggttcaccttagatatttaaggttaaaaactaacggaaatgaccaaaatagtaaacg 6140385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 544 - 614
Target Start/End: Complemental strand, 28102236 - 28102166
Alignment:
Q  544 cacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    |||||| |||||| ||||||||||||||||||| || |||||| |||||| ||||||||||| ||||||||    
T  28102236 cacctataaagttgattcaccttagacatttaaggttaaaaataaacggaaatgaccaaaatggtaaacgg 28102166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 532 - 613
Target Start/End: Complemental strand, 38370455 - 38370373
Alignment:
Q  532 tctatggtagaccacctacaaagttaattcaccttagaca-tttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||||||| ||||||||||||||||  |||||||||| || ||||| || ||||| ||||||||||||||||||| |||||||    
T  38370455 tctatggtggaccacctacaaagttggttcaccttagtcattttaaggttaaaaactaacggagatgaccaaaatggtaaacg 38370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 613
Target Start/End: Complemental strand, 50530676 - 50530594
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||| ||| ||||| ||||||  |||||||||||| ||||| || |||||||||| || |||||||||||||||||||    
T  50530676 gtctatggtggactacctataaagttggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaatagtaaacg 50530594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 26202421 - 26202481
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  26202421 ttatgggaccaaattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 26202481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 534 - 613
Target Start/End: Complemental strand, 17319212 - 17319133
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||| |||||||||||  |||||  |||||||||||||||||| || ||||| |||||| || |||||||||||||||||    
T  17319212 tatgatagaccacctaagaagttggttcaccttagacatttaaggttaaaaactaacggtgaagaccaaaatagtaaacg 17319133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 544 - 631
Target Start/End: Original strand, 31712462 - 31712548
Alignment:
Q  544 cacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggga 631  Q
    |||||| |||||| |||||||||||| |||||| || |||||| |||||| ||||||||||| |||||| |||||| || ||||||||    
T  31712462 cacctataaagttgattcaccttagatatttaaggttaaaaataaacggaaatgaccaaaatggtaaac-ggaagaagacttatggga 31712548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 664
Target Start/End: Complemental strand, 5687292 - 5687216
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaa 664  Q
    |||||||||||||||||||||||||||| || | ||||||||||||| |||||||||| |||| | |||||||||||||    
T  5687292 taacggagatgaccaaaatagtaaacggcaa-aagatttatgggaccaaattgagacactttata-gttaagggaccaa 5687216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 15317772 - 15317723
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  15317772 aattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 15317723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 682
Target Start/End: Complemental strand, 29663812 - 29663666
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc 633  Q
    |||||| ||||||||| || |||  |||||||||||||||||| || |||| | |||||| | || |||||| |||||| || ||| || ||||||||||    
T  29663812 tatggtggaccacctataatgttggttcaccttagacatttaatgttaaaattaaacggaaaagatcaaaatggtaaac-ggcagaagagttatgggacc 29663714  T
Q  634 -aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
     |||||||||| |||| ||  | ||||| |||||||||| ||||||||||    
T  29663713 aaattgagacaatttatag--ttagggatcaaaatgaaaaccaaaaataa 29663666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 541 - 682
Target Start/End: Original strand, 30682980 - 30683120
Alignment:
Q  541 gaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttga 639  Q
    ||||||||| ||||||| |||| |||| | |||||  || ||||| ||||||||| |||||||| | | |||||   || ||||||||||||||| ||||    
T  30682980 gaccacctataaagttagttcatcttaaatatttattgttaaaaactaacggagaagaccaaaagaattaacggcc-gaagatttatgggaccaaattga 30683078  T
Q  640 gacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||| |||| || |||||||||||||||||||  |||||||||    
T  30683079 gacactttatag-ttaagggaccaaaatgaaaatcaaaaataa 30683120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 33377363 - 33377459
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||| || ||| ||||||||||||| |||||||||| |||| | |||| ||||||||| |||||  |||||||||||    
T  33377363 taacggagaggaccaaaatagtaaac-ggcagaagatttatgggaccaaattgagacactttata-gttaggggaccaaattgaaaatcaaaaataagt 33377459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 23202997 - 23203057
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  23202997 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 23203057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 28103521 - 28103581
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||    
T  28103521 ttatgggaccaaattgagacactttatag-ttaagggaccaaaatgaaatccaaaaataagt 28103581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 46796019 - 46796121
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| ||||| |||||||||| ||| || || |||||||||| |||||||||| |||| | |||| ||||||||||| ||| |||||||    
T  46796019 aaaaactaacggagaggaccacaatagtaaac-ggaggaagacttatgggaccaaattgagacactttata-gttaggggaccaaaattaaaaccaaaaa 46796116  T
Q  680 taagt 684  Q
    |||||    
T  46796117 taagt 46796121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 531 - 678
Target Start/End: Complemental strand, 56296366 - 56296220
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    |||||||||||||||||||  | |||  | |||||||||||||||  || |||||  |||||| || |||||||| |||||||  || | || |||||||    
T  56296366 gtctatggtagaccacctatgatgttggtccaccttagacatttagggttaaaaacaaacggaaattaccaaaatggtaaacgacaa-aagaattatggg 56296268  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaa 678  Q
    ||| |||| |||||||||||| |||||||| | |||||||||| |||||    
T  56296267 accaaattaagacagtttaaa-gttaaggggctaaaatgaaattcaaaa 56296220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 23202321 - 23202263
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||    
T  23202321 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataa 23202263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 28510402 - 28510353
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  28510402 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 28510353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 582 - 663
Target Start/End: Original strand, 34439654 - 34439734
Alignment:
Q  582 aaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggacca 663  Q
    |||| |||||||||||||||||||||||||| || ||| ||||||||||||| |||||| ||| |||| | ||||||||||||    
T  34439654 aaaactaacggagatgaccaaaatagtaaac-ggcagaagatttatgggaccaaattgaaacattttata-gttaagggacca 34439734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 684
Target Start/End: Complemental strand, 35787969 - 35787817
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||  |||  | ||| ||||||||||||| | || ||||| ||||||||| ||||||||  |||||| |  ||| ||||||||||    
T  35787969 gtctatggtggaccacctttaaacatgatttaccttagacatttgatgttaaaaactaacggagaggaccaaaacggtaaac-gacagaagatttatggg 35787871  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||| |||||| ||| |||| | ||||  |||||||| ||||| ||||||||||||    
T  35787870 accaaattgaaacattttata-gttagaggaccaaagtgaaaaccaaaaataagt 35787817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 36645365 - 36645316
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  36645365 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 36645316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 23202400 - 23202460
Alignment:
Q  624 ttatgggaccaat-tgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||  |||||| |||||||| |||||||||||||||||||| |||||||||||    
T  23202400 ttatgggaccaaactgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 23202460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 28509828 - 28509768
Alignment:
Q  624 ttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  28509828 ttatgggaccgaattgagacggtttaaag-ttaagggaccaaaatgaaatttaaaaataagt 28509768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 28509908 - 28509968
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  28509908 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 28509968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 681
Target Start/End: Original strand, 40146616 - 40146715
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||||||||| | |||||| | |||||| || |||||||||| |||||||||| |||| | ||||| |||||||||| ||| |||||||    
T  40146616 aaaaactaacggagatgaccacattagtaatc-ggaagaagacttatgggaccaaattgagacactttata-gttaaaggaccaaaataaaaaccaaaaa 40146713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 41690078 - 41690138
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||| |||| |||||||||||    
T  41690078 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaataaaattcaaaaataagt 41690138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 635
Target Start/End: Complemental strand, 86948 - 86873
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa 635  Q
    |||||||||||||||| | || ||||| ||||||||| |||||||| ||||||| || |||  ||||||||||||||    
T  86948 ttcaccttagacatttgatgttaaaaactaacggagaagaccaaaacagtaaac-ggcagaatatttatgggaccaa 86873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 11113865 - 11113763
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||| ||||||||||| |||||| || ||| || ||||| |||| |||||||||| |||| | |||||||||| ||||||||| || ||||    
T  11113865 aaaaactaacggaaatgaccaaaatggtaaac-ggcagaagagttatgagaccaaattgagacactttata-gttaagggactaaaatgaaaaccgaaaa 11113768  T
Q  680 taagt 684  Q
    |||||    
T  11113767 taagt 11113763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 32509011 - 32509058
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  32509011 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataa 32509058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 44304972 - 44305074
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||||||||||||||||||||||||||||||  |  || ||||||| ||||| |||||||||| |||  | |||| ||||||||| ||||| | |||||    
T  44304972 aaaaattaacggagatgaccaaaatagtaaac-agcggaagatttataggaccaaattgagacactttgta-gttaggggaccaaattgaaaacaaaaaa 44305069  T
Q  680 taagt 684  Q
    |||||    
T  44305070 taagt 44305074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 614
Target Start/End: Complemental strand, 17494272 - 17494217
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    ||||| |||||||||||| || ||||| |||||||||| ||||| |||||||||||    
T  17494272 ttcacgttagacatttaaggttaaaaagtaacggagataaccaatatagtaaacgg 17494217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 684
Target Start/End: Original strand, 28370674 - 28370736
Alignment:
Q  622 atttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||| |||||||| |||||||||||||||| |||  |||||||| ||||||||||||||||||    
T  28370674 atttaggggaccaaattgagacagtttaaag-ttagaggaccaaattgaaatccaaaaataagt 28370736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 531 - 661
Target Start/End: Complemental strand, 34438579 - 34438450
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||| | ||| || |||| | |||| ||||||||| | || ||||| |||| ||||  ||||||||||||||| || ||| ||||||||||    
T  34438579 gtctatggtggactatctataatgttagtccaccatagacatttgaggttaaaaactaacagagagaaccaaaatagtaaac-ggcagaagatttatggg 34438481  T
Q  631 acc-aattgagacagtttaaaggttaagggac 661  Q
    ||| |||||||||| |||| | ||||||||||    
T  34438480 accaaattgagacactttata-gttaagggac 34438450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 306647 - 306598
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||||||||||    
T  306647 aattgaaacagtttaaag-ttaggggaccaaattgaaatccaaaaataagt 306598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 8510925 - 8510876
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| ||||||| ||||||||||||| |||||| |||||||||||    
T  8510925 aattgagacaatttaaag-ttaagggaccaaattgaaattcaaaaataagt 8510876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 8516898 - 8516947
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| ||||||| ||||||||||||| |||||| |||||||||||    
T  8516898 aattgagacaatttaaag-ttaagggaccaaattgaaattcaaaaataagt 8516947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 581 - 682
Target Start/End: Original strand, 15787495 - 15787595
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||||||| ||||| ||||||||| |||||||| || |  | |||||||||||| |||||||| |||| || ||| ||||||||||||||| | |||||    
T  15787495 aaaaattaatggagaggaccaaaatggtaaacggcaaaaa-agttatgggaccaaattgagacactttatag-ttaggggaccaaaatgaaaacaaaaaa 15787592  T
Q  680 taa 682  Q
    |||    
T  15787593 taa 15787595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 26202330 - 26202281
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| ||||||||||||||| |||| |||||||||||    
T  26202330 aattgagacggtttaaag-ttaagggaccaaaataaaattcaaaaataagt 26202281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 26428726 - 26428677
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  26428726 aattgagacagtttaaag-ttaggggaccaaactgaaattcaaaaataagt 26428677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 30671064 - 30671015
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||| || |||||||||||||||||||||| |||||||||    
T  30671064 aattgagacactttatag-ttaagggaccaaaatgaaatccgaaaataagt 30671015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 30672110 - 30672159
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| ||||||| ||| |||||||||||||||||| |||||||||    
T  30672110 aattgagacactttaaag-ttacgggaccaaaatgaaatccgaaaataagt 30672159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 31711162 - 31711113
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||| || |||| |||||||||||||||||||||||||||    
T  31711162 aattgagacactttatag-ttaaaggaccaaaatgaaatccaaaaataagt 31711113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 532 - 614
Target Start/End: Complemental strand, 44159257 - 44159175
Alignment:
Q  532 tctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    |||||||| ||||||||| ||  ||  ||||||||||| |||||   | ||||| |||||||||||||||||||| |||||||    
T  44159257 tctatggtggaccacctataatattgtttcaccttagatatttaggattaaaaactaacggagatgaccaaaataataaacgg 44159175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 46794910 - 46794861
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||||||||||    
T  46794910 aattgaaacagtttaaag-ttaggggaccaaattgaaatccaaaaataagt 46794861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 56297725 - 56297774
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||||||||    
T  56297725 aattgagacagtttaaaa-ttaagggatcaaaatgaaattcaaaaataagt 56297774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 23202917 - 23202857
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| || |||| |||||||| |||||||| ||||||||||| |||||||||||    
T  23202917 ttatgggaccaaatttagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 23202857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 28189332 - 28189392
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||| ||  ||||||| |||||||||||||||||||| |||||||||||    
T  28189332 ttatgggaccaaattgaaacgatttaaag-ttaagggaccaaaatgaaattcaaaaataagt 28189392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 36644900 - 36644960
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||| || ||||||||||| |||||||||||    
T  36644900 ttatgggaccaacttgagacggtttaaag-ttaagagatcaaaatgaaattcaaaaataagt 36644960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 560 - 613
Target Start/End: Original strand, 39592261 - 39592314
Alignment:
Q  560 tcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||||||||| | || |||||||||||||||  ||||||| ||||||||    
T  39592261 tcaccttagacatttgatgttaaaaattaacggagagaaccaaaacagtaaacg 39592314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 936269 - 936237
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||| ||||||||||||||||    
T  936269 gttaagggaccaaaataaaatccaaaaataagt 936237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 682
Target Start/End: Complemental strand, 32508495 - 32508449
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    ||||||||||||||||| |||||||||||||||| |||| |||||||||    
T  32508495 aattgagacagtttaaa-gttaagggaccaaaat-aaattcaaaaataa 32508449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 581 - 648
Target Start/End: Complemental strand, 33376341 - 33376274
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagttta 648  Q
    ||||||||||||||| ||| |||||||||||| |  ||| ||||||||||||| |||||||||| ||||    
T  33376341 aaaaattaacggagaggactaaaatagtaaac-gacagaagatttatgggaccaaattgagacacttta 33376274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 624 - 679
Target Start/End: Complemental strand, 34457529 - 34457474
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    |||||||||||| || ||||||||||||| |||| ||||||||||||||| ||||||    
T  34457529 ttatgggaccaaattaagacagtttaaag-ttaaaggaccaaaatgaaattcaaaaa 34457474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 621 - 684
Target Start/End: Original strand, 37560331 - 37560394
Alignment:
Q  621 gatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||| |||||||| |||| || ||| ||||||||| ||||| ||||||||||||    
T  37560331 gatttatgggaccaaattgagacactttatag-ttaggggaccaaattgaaaaccaaaaataagt 37560394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 39135556 - 39135603
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||||||||| ||| ||||| ||| ||||||||||||||||    
T  39135556 aattgagacagtttaaag-ttaggggactaaattgaaatccaaaaataa 39135603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 636 - 684
Target Start/End: Original strand, 44664374 - 44664421
Alignment:
Q  636 ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||| ||||||| |||| |||||||||| ||||||||||||||||    
T  44664374 ttgagacattttaaag-ttaatggaccaaaataaaatccaaaaataagt 44664421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 621 - 684
Target Start/End: Complemental strand, 53400269 - 53400206
Alignment:
Q  621 gatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||| ||||||| |||||||| |||| || ||| ||||||||||||||||| ||||||||||    
T  53400269 gatttataggaccaaattgagacactttatag-ttatgggaccaaaatgaaatctaaaaataagt 53400206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 7e-20; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 3979312 - 3979408
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||||| | || || |||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||    
T  3979312 taacggagaggaccaaaatagtaaacggca-gaagaattatgggaccaaattgagacactttatag-ttaagggaccaaaatgaaatccaaaaataagt 3979408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 531 - 684
Target Start/End: Complemental strand, 21277167 - 21277015
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||| || ||||| ||| ||||| || ||||||||||||| || ||| ||||||||||    
T  21277167 gtctatggtggaccacctataaagttggttcaccttagacatttaaggtcaaaaactaatggagaggatcaaaatagtaaac-ggcagaagatttatggg 21277069  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||| |||||||| | |||| | |||| |  |||||| ||||| ||||||||||||    
T  21277068 accaaattgagatactttata-gttaggcaaccaaattgaaaaccaaaaataagt 21277015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 13641380 - 13641278
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| |||||||||||||||||||||||||| || ||| ||||||||||||| |||||||||| |||| | |||| ||||||||| ||||| |||||||    
T  13641380 aaaaaataacggagatgaccaaaatagtaaac-ggcagaagatttatgggaccaaattgagacactttata-gttaggggaccaaagtgaaaaccaaaaa 13641283  T
Q  680 taagt 684  Q
    |||||    
T  13641282 taagt 13641278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 26056146 - 26056242
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||||  || || |||||||||||||| |||||||| |||| || ||| ||||||||||||||||||||||||||||    
T  26056146 taacggagaggaccaaaatagtaaacgacaaaag-atttatgggaccaaattgagacactttatag-ttaggggaccaaaatgaaatccaaaaataagt 26056242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 531 - 665
Target Start/End: Complemental strand, 14169792 - 14169659
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| | ||||||| ||||||  |||||||||||||||||| || ||||| |||| || | |||||||||||||||||  || | ||||||||||    
T  14169792 gtctatggtgggccacctataaagttggttcaccttagacatttaaggttaaaaactaacagataagaccaaaatagtaaacgacaa-aagatttatggg 14169694  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaa 665  Q
    ||| |||||||||| |||| | ||||| ||||||||    
T  14169693 accaaattgagacattttata-gttaaaggaccaaa 14169659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 613
Target Start/End: Original strand, 51726787 - 51726869
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||| || ||||| |||||| || ||| |||||||||||||    
T  51726787 gtctatggtggaccacctataaagttggttcaccttagacatttaaggttaaaaactaacggtgaggactaaaatagtaaacg 51726869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 47512130 - 47512179
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  47512130 aattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 47512179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 20171197 - 20171257
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  20171197 ttatgggaccaaattgagacagtttaaag-ttaagggaccaaaataaaattcaaaaataagt 20171257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 25866707 - 25866767
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  25866707 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 25866767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 32823539 - 32823479
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| |||| |||||||||||    
T  32823539 ttatgggaccaaattgagacagtttaaag-ttaagggaccaaaataaaattcaaaaataagt 32823479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 51760120 - 51760060
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  51760120 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 51760060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 51760707 - 51760767
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  51760707 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 51760767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 52371064 - 52371004
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  52371064 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 52371004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 582 - 665
Target Start/End: Original strand, 36511325 - 36511407
Alignment:
Q  582 aaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaa 665  Q
    |||| |||||||||||||||||||||||||| |  ||| ||||||||||||| |||||||||| |||| | ||||||||||||||    
T  36511325 aaaactaacggagatgaccaaaatagtaaac-gacagaagatttatgggaccaaattgagacactttata-gttaagggaccaaa 36511407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 684
Target Start/End: Original strand, 2972958 - 2973103
Alignment:
Q  538 gtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aat 636  Q
    |||||||| ||||||||||  | ||||||||||||||||||| ||||| |||| || | ||||| | |||||||||||   | || |||| ||||| |||    
T  2972958 gtagaccatctacaaagttggtacaccttagacatttaaagttaaaaactaacagaaaggaccacactagtaaacggg-gtaagacttataggaccaaat 2973056  T
Q  637 tgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||| |||| |  ||||||||| ||||||||| | ||||||||||    
T  2973057 tgagacactttata-attaagggactaaaatgaaaacaaaaaataagt 2973103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 586 - 684
Target Start/End: Complemental strand, 3978162 - 3978065
Alignment:
Q  586 ttaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||||||||||||||||  | || || |||||||| ||| |||||||| |||| || |||| ||||||||||||||| |||||||||||    
T  3978162 ttaacggagaggaccaaaatagtaaacgaca-gaagaattatgggatcaaattgagacactttatag-ttaaaggaccaaaatgaaattcaaaaataagt 3978065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 20170641 - 20170583
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||    
T  20170641 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataa 20170583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 684
Target Start/End: Complemental strand, 9633920 - 9633796
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaag 657  Q
    |||||||||||||||| | || ||||| ||||||||| || |||||  ||||||||   || |||||||   ||||| |||||||| |||| || |||||    
T  9633920 ttcaccttagacatttgatgttaaaaactaacggagaggatcaaaactgtaaacggtt-gaagatttatataaccaaattgagacactttatag-ttaag 9633823  T
Q  658 ggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||| ||||||||||||    
T  9633822 ggaccaaaatgaaaaccaaaaataagt 9633796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 531 - 684
Target Start/End: Original strand, 13930618 - 13930770
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    |||||||||||||||| || ||||||  |||||  ||||||||||| || |||||  |||||| | ||||||||| |||||| |  | | || |||||||    
T  13930618 gtctatggtagaccacatataaagttgtttcacaatagacatttaaggttaaaaacaaacggaaaggaccaaaatggtaaac-gacataagacttatggg 13930716  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||| |||||||||| |||| | ||||  |||||||| ||||| ||||||||||||    
T  13930717 accaaattgagacactttata-gttagaggaccaaattgaaaaccaaaaataagt 13930770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 27114855 - 27114904
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  27114855 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 27114904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 27115498 - 27115547
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  27115498 aattgtgacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 27115547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 32824180 - 32824229
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  32824180 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 32824229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 47511539 - 47511588
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  47511539 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 47511588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 4388074 - 4388014
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  4388074 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 4388014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 32823576 - 32823636
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| ||| ||||||||||| |||| |||||||||||    
T  32823576 ttatgggaccaaattgagacagtttaaag-ttaggggaccaaaataaaattcaaaaataagt 32823636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 32824089 - 32824029
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  32824089 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 32824029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 47511448 - 47511388
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||  |||||||| ||||||||||| |||||||||||    
T  47511448 ttatgggaccaaattgagacagtttaaaa-ttaagggatcaaaatgaaattcaaaaataagt 47511388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 51760200 - 51760260
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||| || |||||||| |||||||||||||||||||| |||||||||||    
T  51760200 ttatgggaccaaattgatacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 51760260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 51760627 - 51760567
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  51760627 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 51760567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 531 - 635
Target Start/End: Complemental strand, 8092771 - 8092668
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||| ||||||  ||||||||||| |||||| || ||| | ||||||| | |||||||  ||||||| ||| || |||||||||     
T  8092771 gtctatggtggaccacctataaagttggttcaccttagatatttaaggttaaatactaacggaaaggaccaaatcagtaaac-ggaggaagatttatgga 8092673  T
Q  631 accaa 635  Q
    |||||    
T  8092672 accaa 8092668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 13929418 - 13929316
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    |||||| |||||| | |||||| ||  ||||||| |||| |||||| |||||||| |||||||| |||| || ||||||||||||| ||||| |||||||    
T  13929418 aaaaataaacggacaggaccaagatgataaacgg-aagaagatttacgggaccaaattgagacactttatag-ttaagggaccaaattgaaaaccaaaaa 13929321  T
Q  680 taagt 684  Q
    |||||    
T  13929320 taagt 13929316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 684
Target Start/End: Complemental strand, 26055004 - 26054918
Alignment:
Q  597 gaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||  | || ||||||||| ||||| |||| ||| |||| || ||| ||||||||||||||||||||||||||||    
T  26055004 gaccaaaatagtaaacgaca-gaagatttatggaaccaaattgaaacactttatag-ttaggggaccaaaatgaaatccaaaaataagt 26054918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 684
Target Start/End: Original strand, 42248337 - 42248400
Alignment:
Q  621 gatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||| ||||||| |||||||| |||| || ||| ||||||||||||||||||||||||||||    
T  42248337 gatttataggaccaaattgagacactttatag-ttatgggaccaaaatgaaatccaaaaataagt 42248400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 50679814 - 50679916
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| ||||| | |||||||||| | || || |||||||||||| |||||||| |||| || ||||||||||||||| ||| | |||||    
T  50679814 aaaaactaacggagaggaccatattagtaaacgg-aggaagacttatgggaccaaattgagacactttatag-ttaagggaccaaaataaaaactaaaaa 50679911  T
Q  680 taagt 684  Q
    |||||    
T  50679912 taagt 50679916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 634 - 682
Target Start/End: Complemental strand, 52371803 - 52371756
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  52371803 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataa 52371756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 534 - 684
Target Start/End: Original strand, 13642503 - 13642652
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggga-c 632  Q
    |||||||||||||||  ||||||  | |||||||||||||||| || ||||| |||||||   |||||||||  ||||| || |||  | |||||||| |    
T  13642503 tatggtagaccacctgtaaagttcgtccaccttagacatttaaggttaaaaactaacggaagagaccaaaattataaac-ggcagaatagttatgggatc 13642601  T
Q  633 caattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
     || ||||||| ||||||  |||  |||||||||||||| ||||||||||||    
T  13642602 aaactgagacactttaaa-attagaggaccaaaatgaaaaccaaaaataagt 13642652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 682
Target Start/End: Original strand, 25866115 - 25866173
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||    
T  25866115 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataa 25866173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 25866627 - 25866569
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| |||| | |||||||    
T  25866627 ttatgggaccaaattgagacagtttaaag-ttaagggaccaaaataaaattcgaaaataa 25866569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 614
Target Start/End: Original strand, 49141467 - 49141522
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    |||||||||||||||| | || ||||| ||||||||||||| ||||| ||||||||    
T  49141467 ttcaccttagacatttgatgttaaaaactaacggagatgactaaaatggtaaacgg 49141522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 684
Target Start/End: Complemental strand, 51424303 - 51424272
Alignment:
Q  653 ttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||||||||||||||||||||    
T  51424303 ttaagggaccaaaatgaaatccaaaaataagt 51424272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 587 - 684
Target Start/End: Complemental strand, 14390375 - 14390279
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| ||||||||| |||||||  |||| ||||||||| ||||| |||||||| |||| || |||  |||||||||||||||  ||||||||||    
T  14390375 taacggagaggaccaaaatggtaaacga-aagaagatttatggaaccaaattgagacattttatag-ttagaggaccaaaatgaaattaaaaaataagt 14390279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 25787163 - 25787259
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||  || | | |||||||| |||| |||||||||| |||| | |||| ||||||||| ||||| ||||||||||||    
T  25787163 taacggagaggaccaaaatagtaaa-tggcataagatttatgagaccaaattgagacactttata-gttaggggaccaaattgaaaaccaaaaataagt 25787259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 25866024 - 25865975
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||| || |||||||| |||||||||||||||||||| |||||||||||    
T  25866024 aattgaaacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 25865975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 28309832 - 28309783
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  28309832 aattgagacggtttaaag-ttaagggaccaaaatgaaattaaaaaataagt 28309783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 37694723 - 37694674
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||| ||||||||||| ||||||||||||||||||||  ||||||||||    
T  37694723 aattgaaacagtttaaag-ttaagggaccaaaatgaaatttaaaaataagt 37694674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 38458156 - 38458107
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| ||||||| ||| ||||||||| ||||||||||||||||||    
T  38458156 aattgagacaatttaaag-ttaggggaccaaattgaaatccaaaaataagt 38458107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 39193651 - 39193602
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||||||||||||||| ||||  ||||||||||    
T  39193651 aattgagacagtttaaag-ttaagggaccaaaataaaattaaaaaataagt 39193602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 52371155 - 52371204
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  52371155 aattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 52371204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 20171117 - 20171057
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| |||||||||||  ||||||||||    
T  20171117 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattaaaaaataagt 20171057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 635 - 684
Target Start/End: Complemental strand, 25432565 - 25432517
Alignment:
Q  635 attgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  25432565 attgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 25432517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 665
Target Start/End: Complemental strand, 36509954 - 36509851
Alignment:
Q  561 caccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaaggg 659  Q
    |||| ||||||||| | || ||||| |||||||||  ||||||||||||||| || ||| ||||||||| ||| |||||| ||| |||| | ||||||||    
T  36509954 caccatagacatttgaggttaaaaactaacggagagaaccaaaatagtaaac-ggcagaagatttatggaaccaaattgaaacactttata-gttaaggg 36509857  T
Q  660 accaaa 665  Q
    ||||||    
T  36509856 accaaa 36509851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 38280999 - 38280942
Alignment:
Q  538 gtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggaga 595  Q
    ||||||||| |||| ||||  ||||||||||||||||||||| ||||| | |||||||    
T  38280999 gtagaccacttacagagttggttcaccttagacatttaaagttaaaaactgacggaga 38280942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 581 - 614
Target Start/End: Complemental strand, 47560262 - 47560229
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    |||||||||||||||||||||||| |||||||||    
T  47560262 aaaaattaacggagatgaccaaaacagtaaacgg 47560229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 531 - 682
Target Start/End: Original strand, 14071147 - 14071296
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    |||||||||||||||| || ||| ||  |||||  ||||||||||| || |||||  |||||| | ||||||||| |||||| |  ||| || |||||||    
T  14071147 gtctatggtagaccacatataaa-ttgtttcacaatagacatttaaggttaaaaacaaacggaaaggaccaaaatggtaaac-gacagaagacttatggg 14071244  T
Q  631 acc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    ||| |||||||||| |||| | ||||  |||||||| ||||| ||||||||||    
T  14071245 accaaattgagacactttata-gttagaggaccaaattgaaaaccaaaaataa 14071296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 17750366 - 17750334
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||||| ||||||||||    
T  17750366 gttaagggaccaaaatgaaatcaaaaaataagt 17750334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 621 - 684
Target Start/End: Complemental strand, 25786052 - 25785989
Alignment:
Q  621 gatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||| |||||||| |||| || ||| ||||||||| ||||| ||||||||||||    
T  25786052 gatttatgggaccaaattgagacactttatag-ttaggggaccaaattgaaaaccaaaaataagt 25785989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 28999893 - 28999861
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||||||||| |||||||||||    
T  28999893 gttaagggaccaaaatgaaattcaaaaataagt 28999861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 39195052 - 39195099
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    ||||||||| |||||||| ||||||||||||||||||||  ||||||||    
T  39195052 aattgagacggtttaaag-ttaagggaccaaaatgaaattaaaaaataa 39195099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 551 - 635
Target Start/End: Complemental strand, 40109514 - 40109431
Alignment:
Q  551 aaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa 635  Q
    ||||||| ||||||||||||||||||  | ||||| |||| || | ||||| | |||||||| ||| || |||||||||||||||    
T  40109514 aaagttacttcaccttagacatttaagattaaaaactaacagaaaggaccacattagtaaac-ggatgaagatttatgggaccaa 40109431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Original strand, 52371847 - 52371879
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||||||||| |||||||||||    
T  52371847 gttaagggaccaaaatgaaattcaaaaataagt 52371879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 47855331 - 47855433
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| |||||||||||||||||| | || ||||||| ||||||| |||||||| |||| || |||| ||||||||||||||||||||||    
T  47855331 aaaaaataacggagaggaccaaaatagtaaacggca-gaagatttataggaccaaattgagacactttatag-ttaacggaccaaaatgaaatccaaaaa 47855428  T
Q  680 taagt 684  Q
    |||||    
T  47855429 taagt 47855433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 534 - 684
Target Start/End: Original strand, 26798852 - 26799001
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc 633  Q
    |||||| ||||||||||||||||  ||| | |||  ||||||| || ||||| ||||||||| ||||||||| |||||| ||| || || ||||||||||    
T  26798852 tatggtggaccacctacaaagttggttcgctttaaccatttaaggttaaaaactaacggagaggaccaaaatggtaaac-ggaggaagaattatgggacc 26798950  T
Q  634 -aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
     |||||||||| |||| | |||| ||||||||||| ||| ||||||||||||    
T  26798951 aaattgagacattttata-gttaggggaccaaaataaaaaccaaaaataagt 26799001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 563 - 684
Target Start/End: Complemental strand, 25583255 - 25583135
Alignment:
Q  563 ccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggac 661  Q
    |||||||||||||| || |||||||||| |||| |||||||||||||||| || ||| || |||||||||| ||||||||| ||||||  |||| |||||    
T  25583255 ccttagacatttaaggttaaaaattaacagagaggaccaaaatagtaaac-ggcagaagacttatgggaccaaattgagac-gtttaatagttaggggac 25583158  T
Q  662 caaaatgaaatccaaaaataagt 684  Q
    |||| |||||  |||||||||||    
T  25583157 caaagtgaaaatcaaaaataagt 25583135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 54653965 - 54654061
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||||  | || || |||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||    
T  54653965 taacggagaggaccaaaatagtaaacgaca-gaagaattatgggaccaaattgagacactttatag-ttaagggaccaaaatgaaatccaaaaataagt 54654061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 684
Target Start/End: Complemental strand, 11219575 - 11219451
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaag 657  Q
    |||||||||||  ||| | || ||||  |||||||||||||||||||||||||| || ||| || | ||| |||| |||||||||| |||| | |||| |    
T  11219575 ttcaccttagaattttgatgttaaaatctaacggagatgaccaaaatagtaaac-ggcagaagactcatgagaccaaattgagacactttata-gttagg 11219478  T
Q  658 ggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||||||||||    
T  11219477 ggaccaaaatgaaatccaaaaataagt 11219451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 587 - 684
Target Start/End: Complemental strand, 29536831 - 29536735
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||||  |||| ||||||||||||||| |||||||| |||| || |||  ||| |||||||||||||||||||||||    
T  29536831 taacggagaggaccaaaatagtaaacga-aagaagatttatgggaccaaattgagacactttatag-ttagaggatcaaaatgaaatccaaaaataagt 29536735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 531 - 613
Target Start/End: Original strand, 48867373 - 48867455
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| || ||||| |||| || | ||||| | |||||||||    
T  48867373 gtctatggtagaccacctacaaagttggttcaccttagacatttaaggttaaaaactaacagaaaggaccacattagtaaacg 48867455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 587 - 684
Target Start/End: Original strand, 51825620 - 51825716
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||| |||||||||||||||||||  | || ||||||||||||||| |||| ||| |||| || ||||||||||||| ||||||||||||||||||    
T  51825620 taacggatatgaccaaaatagtaaacgaca-gaagatttatgggaccaaattgaaacactttatag-ttaagggaccaaagtgaaatccaaaaataagt 51825716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 532 - 613
Target Start/End: Complemental strand, 23559991 - 23559910
Alignment:
Q  532 tctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||||||| ||||||||| ||||||  |||| |||||||| |||| || ||||| ||||||||| |||||||||||||||||    
T  23559991 tctatggtggaccacctataaagttggttcatcttagacaattaaggttaaaaactaacggagaggaccaaaatagtaaacg 23559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 51214201 - 51214261
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||    
T  51214201 ttatgggaccaaattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 51214261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 8372609 - 8372711
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| |||||||| ||||||||||||||||| |   | |||||||||||||||| |||||||| |||| || ||| ||||||||||||||| |||||||    
T  8372609 aaaaactaacggaggtgaccaaaatagtaaactgtt-gtggatttatgggaccaaattgagacactttatag-ttaggggaccaaaatgaaaaccaaaaa 8372706  T
Q  680 taagt 684  Q
    |||||    
T  8372707 taagt 8372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 612
Target Start/End: Original strand, 12062330 - 12062408
Alignment:
Q  534 tatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaac 612  Q
    |||||| || |||||| ||||||  |||||||||||||||||| || ||||| ||| ||| ||||||||||||||||||    
T  12062330 tatggtggatcacctataaagttggttcaccttagacatttaaggttaaaaactaatggaaatgaccaaaatagtaaac 12062408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 23886197 - 23886137
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  23886197 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 23886137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 30431456 - 30431396
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||||| |||||||||||    
T  30431456 ttatgggaccaaattgagacagtttaaaa-ttaagggaccaaaatgaaattcaaaaataagt 30431396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 44384331 - 44384391
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  44384331 ttatgggaccaaattgagacagtttaaag-ttaagggactaaaatgaaattcaaaaataagt 44384391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 46987406 - 46987346
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  46987406 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 46987346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 531 - 612
Target Start/End: Complemental strand, 49333156 - 49333075
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaac 612  Q
    ||||||||| ||||||| | |||||| ||||||||||||| ||||| |||||||| |||| |||||| ||| ||| ||||||    
T  49333156 gtctatggtggaccacccataaagttgattcaccttagacgtttaaggtgaaaaactaaccgagatggccagaatggtaaac 49333075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 8371343 - 8371241
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||||| ||||||||||||||||  | ||| ||||||||| ||| |||||||||| |||| | |||| ||||||||||||||| | |||||    
T  8371343 aaaaactaacggagaggaccaaaatagtaaac-tgcagaagatttatggaaccaaattgagacattttata-gttaggggaccaaaatgaaaacaaaaaa 8371246  T
Q  680 taagt 684  Q
    |||||    
T  8371245 taagt 8371241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 613
Target Start/End: Original strand, 35174339 - 35174407
Alignment:
Q  545 acctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    ||||| ||||||  |||||||||||| ||||| || |||||||||| || |||||||||||||||||||    
T  35174339 acctataaagttggttcaccttagacttttaaggttaaaaattaacagaaatgaccaaaatagtaaacg 35174407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 684
Target Start/End: Original strand, 47808103 - 47808201
Alignment:
Q  585 attaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataag 683  Q
    ||||||||||| ||||||||||| |||||  | || |||||||| |||||| |||||||| |||| || |||||| |||||| |||||||||||||||||    
T  47808103 attaacggagaggaccaaaatagcaaacgaca-gaagatttatgagaccaaattgagacactttatag-ttaaggaaccaaagtgaaatccaaaaataag 47808200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 49334330 - 49334432
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacca-attgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| |||| ||||||| ||||||||||||| || ||| ||||||| |||||| ||||||||| |||| | ||||| |||||||||||||| | |||||    
T  49334330 aaaaactaacagagatgatcaaaatagtaaac-ggtagaagatttatcggaccatattgagacaatttata-gttaaaggaccaaaatgaaaacaaaaaa 49334427  T
Q  680 taagt 684  Q
    |||||    
T  49334428 taagt 49334432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 634 - 682
Target Start/End: Complemental strand, 51214110 - 51214063
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||    
T  51214110 aattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataa 51214063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 624 - 682
Target Start/End: Original strand, 23886278 - 23886336
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||    
T  23886278 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataa 23886336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 2225070 - 2225119
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  2225070 aattgagacagtttaaag-ttaggggaccaaattgaaatccaaaaataagt 2225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 19283804 - 19283755
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  19283804 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 19283755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 684
Target Start/End: Complemental strand, 42570086 - 42570033
Alignment:
Q  630 gaccaattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||||||||| |||| ||||||||| |||||| |||||||||||    
T  42570086 gaccaattgagacagtttaaa-gttaggggaccaaattgaaattcaaaaataagt 42570033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 5810045 - 5810105
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  5810045 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 5810105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 634 - 683
Target Start/End: Original strand, 7583882 - 7583930
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataag 683  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  7583882 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataag 7583930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 684
Target Start/End: Original strand, 11220658 - 11220753
Alignment:
Q  588 aacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||  |||||||||||||||||  | || ||||||| ||||||| |||||||| |||| || ||| |||||||||||||||| |||||||||||    
T  11220658 aacggaggggaccaaaatagtaaacgaca-gaagatttataggaccaaattgagacactttatag-ttaggggaccaaaatgaaattcaaaaataagt 11220753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 12106542 - 12106602
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||| |||||||||||||| |||||||||||    
T  12106542 ttatgggaccaaattgagacggtttaaag-ttaagagaccaaaatgaaattcaaaaataagt 12106602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 13042028 - 13041968
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  13042028 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 13041968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 13050105 - 13050045
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  13050105 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 13050045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 23886861 - 23886921
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||||||    
T  23886861 ttatgggaccaaattgagacgatttaaag-ttaagggaccaaaatgaaattcaaaaataagt 23886921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 30431533 - 30431593
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| | |||||||||    
T  30431533 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcgaaaataagt 30431593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 30432036 - 30431976
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| |||||||||||    
T  30432036 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 30431976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 30838505 - 30838565
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||| ||||||||| ||||||||||||||| |||| |||||||||||    
T  30838505 ttatgggaccaaattgagatagtttaaag-ttaagggaccaaaataaaattcaaaaataagt 30838565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 46988504 - 46988564
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  46988504 ttattggaccaagttgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 46988564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 51213532 - 51213472
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| ||||||||| |||||||||| |||||||||||    
T  51213532 ttatgggaccaaattgagacggtttaaag-ttaagggacgaaaatgaaattcaaaaataagt 51213472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 32980445 - 32980547
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggacc-aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| |||||||||||||||||||||||||| || ||| ||||||| ||||| |||||||||| |||  | |||| ||||||||| ||||| |  ||||    
T  32980445 aaaaactaacggagatgaccaaaatagtaaac-ggcagaagatttataggaccaaattgagacactttgta-gttaggggaccaaattgaaaacagaaaa 32980542  T
Q  680 taagt 684  Q
    |||||    
T  32980543 taagt 32980547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 634 - 682
Target Start/End: Original strand, 54109668 - 54109715
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  54109668 aattgagacaatttaaag-ttaagggaccaaaatgaaattcaaaaataa 54109715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 684
Target Start/End: Original strand, 10987686 - 10987748
Alignment:
Q  622 atttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||| |||||||| |||| || ||| ||||||||||||||| ||||||||||||    
T  10987686 atttatgggaccaaattgagacactttatag-ttaggggaccaaaatgaaaaccaaaaataagt 10987748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 682
Target Start/End: Complemental strand, 12106462 - 12106404
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||| |||| |||||||||    
T  12106462 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaattaaattcaaaaataa 12106404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 682
Target Start/End: Original strand, 46987485 - 46987543
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataa 682  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||| |||| |||||||||    
T  46987485 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaataaaattcaaaaataa 46987543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 653 - 684
Target Start/End: Complemental strand, 47806870 - 47806839
Alignment:
Q  653 ttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||||||||||||||||||||    
T  47806870 ttaagggaccaaaatgaaatccaaaaataagt 47806839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 613
Target Start/End: Complemental strand, 53808464 - 53808409
Alignment:
Q  558 attcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||||||||||| |||| | || ||||| ||| |||||||||||||||||||||||    
T  53808464 attcaccttagaaatttgatgttaaaaactaatggagatgaccaaaatagtaaacg 53808409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 2224942 - 2224893
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||| |||||| ||||||||||||| | ||||||||||||||||    
T  2224942 aattgagacagattaaag-ttaagggaccaaattaaaatccaaaaataagt 2224893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 7575524 - 7575573
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||| |||| |||||||| |||||||||||||||||||| |||||||||||    
T  7575524 aattaagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 7575573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 7583780 - 7583731
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| ||||| |||||||||||||| |||||||||||    
T  7583780 aattgagacggtttaaag-ttaagtgaccaaaatgaaattcaaaaataagt 7583731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 12105429 - 12105380
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||  ||||||| |||||||||||||||||||| |||||||||||    
T  12105429 aattgagacgctttaaag-ttaagggaccaaaatgaaattcaaaaataagt 12105380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 13997328 - 13997279
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||| || |||||||| |||||||||||||||||||| |||||||||||    
T  13997328 aattgaaacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 13997279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 19283907 - 19283956
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| ||||||||||||||| |||| |||||||||||    
T  19283907 aattgagacggtttaaag-ttaagggaccaaaataaaattcaaaaataagt 19283956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 19579340 - 19579389
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| |||| || |||||||||||||||||||||| |||||||||    
T  19579340 aattgagacactttatag-ttaagggaccaaaatgaaatccgaaaataagt 19579389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 12105520 - 12105580
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| || ||||| ||||||||||| |||||||||||    
T  12105520 ttatgggaccaaattgagacggtttaaag-ttgagggatcaaaatgaaattcaaaaataagt 12105580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 13997419 - 13997479
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| |||||| |||| |||||||||||    
T  13997419 ttatgggaccaagttgagacggtttaaag-ttaagggatcaaaataaaattcaaaaataagt 13997479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 51213612 - 51213672
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||  |||||||| |||||||| ||||||||||| |||||||||||    
T  51213612 ttatgggaccaaattgagatggtttaaag-ttaagggatcaaaatgaaattcaaaaataagt 51213672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 382008 - 381976
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||||||||||||||||||    
T  382008 gttaagggatcaaaatgaaatccaaaaataagt 381976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 587 - 635
Target Start/End: Complemental strand, 2124146 - 2124099
Alignment:
Q  587 taacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa 635  Q
    |||||||||||||||||||||||||| || | | |||||||||||||||    
T  2124146 taacggagatgaccaaaatagtaaac-ggcataagatttatgggaccaa 2124099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Original strand, 10817742 - 10817774
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||| ||||||||||||    
T  10817742 gttaagggaccaaaatgaaacccaaaaataagt 10817774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 531 - 635
Target Start/End: Complemental strand, 21128098 - 21127995
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatggg 630  Q
    ||||||||| ||||||||| || |||  | |||||||||||||||  || |||||   ||||| ||||||||||| |||||| || ||| || |||||||    
T  21128098 gtctatggtggaccacctataatgttggtccaccttagacatttagggttaaaaacagacggaaatgaccaaaatggtaaac-ggcagaagagttatggg 21128000  T
Q  631 accaa 635  Q
    |||||    
T  21127999 accaa 21127995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 652 - 684
Target Start/End: Complemental strand, 42592518 - 42592486
Alignment:
Q  652 gttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||||| ||||||||||||    
T  42592518 gttaagggaccaaaatgaaacccaaaaataagt 42592486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 621 - 684
Target Start/End: Original strand, 51401383 - 51401446
Alignment:
Q  621 gatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||| |||||||| |||| || ||| ||||||||| ||||| ||||||||||||    
T  51401383 gatttatgggaccaaattgagacactttatag-ttaggggaccaaagtgaaaaccaaaaataagt 51401446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 531 - 614
Target Start/End: Complemental strand, 16118 - 16035
Alignment:
Q  531 gtctatggtagaccacctacaaagttaattcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgg 614  Q
    ||||||||| ||||| ||| ||||||  |||| ||||||||||||| || ||||| ||||||||| ||| ||||||||||||||    
T  16118 gtctatggtggaccatctataaagttggttcatcttagacatttaaggttaaaaactaacggagaggactaaaatagtaaacgg 16035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 3098 - 3147
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  3098 aattgagacagtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 3147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 2080 - 2031
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  2080 aattgagacaatttaaag-ttaagggaccaaaatgaaatctaaaaataagt 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000004; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 28834 - 28774
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  28834 ttatgggaccaaattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 28774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 28213 - 28153
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| |||||||  ||||||| |||||||||||||||||||| |||||||||||    
T  28213 ttatgggaccaaattgagacgttttaaag-ttaagggaccaaaatgaaattcaaaaataagt 28153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 614
Target Start/End: Original strand, 145866 - 145895
Alignment:
Q  585 attaacggagatgaccaaaatagtaaacgg 614  Q
    ||||||||||||||||||||||||||||||    
T  145866 attaacggagatgaccaaaatagtaaacgg 145895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 684
Target Start/End: Original strand, 599 - 723
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggac-caattgagacagtttaaaggttaag 657  Q
    |||||||||||  ||| | || ||||| ||||||||||||||||||| |||||| || ||| ||||||||||||  |||||||||| |||| | |||| |    
T  599 ttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaac-ggcagaagatttatgggactaaattgagacactttata-gttagg 696  T
Q  658 ggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||| ||| | | ||||||||||    
T  697 ggaccaaagtgataacaaaaaataagt 723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 684
Target Start/End: Complemental strand, 675 - 551
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggac-caattgagacagtttaaaggttaag 657  Q
    |||||||||||  ||| | || ||||| ||||||||||||||||||| |||||| || ||| ||||||||||||  |||||||||| |||| | |||| |    
T  675 ttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaac-ggcagaagatttatgggactaaattgagacactttata-gttagg 578  T
Q  658 ggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||| ||| | | ||||||||||    
T  577 ggaccaaagtgataacaaaaaataagt 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 684
Target Start/End: Original strand, 9449 - 9573
Alignment:
Q  559 ttcaccttagacatttaaagtgaaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggac-caattgagacagtttaaaggttaag 657  Q
    |||||||||||  ||| | || ||||| ||||||||||||||||||| |||||| || ||| ||||||||||||  |||||||||| |||| | |||| |    
T  9449 ttcaccttagattttttatgttaaaaactaacggagatgaccaaaatggtaaac-ggcagaagatttatgggactaaattgagacactttata-gttagg 9546  T
Q  658 ggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||| ||| | | ||||||||||    
T  9547 ggaccaaagtgataacaaaaaataagt 9573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 684
Target Start/End: Complemental strand, 8502 - 8400
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaatt-gagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| |||||||||||||| |||||||||| |    || ||||||||||||||||| ||||||||||| || ||| |||| |||| ||||| |||||||    
T  8502 aaaaactaacggagatgaccgaaatagtaaatgact-gaagatttatgggaccaatttgagacagtttatag-ttaggggagcaaagtgaaaaccaaaaa 8405  T
Q  680 taagt 684  Q
    |||||    
T  8404 taagt 8400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 684
Target Start/End: Complemental strand, 1924 - 1875
Alignment:
Q  634 aattgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  1924 aattgagacggtttaaag-ttaagggaccaaaatgaaattcaaaaataagt 1875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Original strand, 2015 - 2075
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||| |||||||| ||||||||||| ||||| |||||    
T  2015 ttatgggaccaaattgagacggtttaaag-ttaagggatcaaaatgaaattcaaaattaagt 2075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 613
Target Start/End: Complemental strand, 22250 - 22218
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacg 613  Q
    |||||||||||||||||||||||||||||||||    
T  22250 aaaaattaacggagatgaccaaaatagtaaacg 22218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 621 - 684
Target Start/End: Original strand, 39933 - 39996
Alignment:
Q  621 gatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    ||||||||||||||| |||||||| |||| |  ||| ||||||||| ||||||||||||||||||    
T  39933 gatttatgggaccaaattgagacactttatac-ttaggggaccaaagtgaaatccaaaaataagt 39996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 624 - 684
Target Start/End: Complemental strand, 106 - 46
Alignment:
Q  624 ttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaataagt 684  Q
    |||||||||||| ||||||| |||||||  |||||||| ||||||||||| |||||||||||    
T  106 ttatgggaccaaattgagacggtttaaaa-ttaagggatcaaaatgaaattcaaaaataagt 46  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 581 - 684
Target Start/End: Original strand, 2258 - 2360
Alignment:
Q  581 aaaaattaacggagatgaccaaaatagtaaacgggaagaggatttatgggaccaa-ttgagacagtttaaaggttaagggaccaaaatgaaatccaaaaa 679  Q
    ||||| ||||||| | |||||||||||||||| | | || || |||||||||||| |||| ||| |||| |  ||| ||||||||||||||| |||||||    
T  2258 aaaaactaacggaaaggaccaaaatagtaaacagta-gaagagttatgggaccaaattgaaacactttataa-ttaggggaccaaaatgaaaaccaaaaa 2355  T
Q  680 taagt 684  Q
    |||||    
T  2356 taagt 2360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1297 times since January 2019
Visitors: 1417