View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0109_low_1 (Length: 554)

Name: NF0109_low_1
Description: NF0109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0109_low_1
NF0109_low_1
[»] chr5 (48 HSPs)
chr5 (1-441)||(29621435-29621875)
chr5 (1-434)||(40780580-40781013)
chr5 (1-441)||(42473261-42473701)
chr5 (128-440)||(32135462-32135775)
chr5 (119-223)||(2854160-2854263)
chr5 (119-222)||(24541043-24541146)
chr5 (1-119)||(2854303-2854420)
chr5 (1-119)||(24541187-24541306)
chr5 (3-121)||(17574350-17574468)
chr5 (3-122)||(36057586-36057705)
chr5 (121-222)||(34327826-34327927)
chr5 (121-223)||(8539866-8539968)
chr5 (121-218)||(17574508-17574605)
chr5 (1-90)||(40782181-40782270)
chr5 (3-121)||(7267875-7267993)
chr5 (121-218)||(7268033-7268130)
chr5 (1-90)||(29620168-29620257)
chr5 (4-121)||(34327668-34327785)
chr5 (17-121)||(18624982-18625086)
chr5 (121-215)||(21841182-21841276)
chr5 (3-60)||(7269446-7269503)
chr5 (17-121)||(30468254-30468358)
chr5 (3-90)||(2852918-2853005)
chr5 (128-213)||(18624849-18624934)
chr5 (1-90)||(21842962-21843051)
chr5 (3-115)||(2179819-2179931)
chr5 (121-222)||(12737329-12737429)
chr5 (25-121)||(8539729-8539825)
chr5 (3-90)||(8541241-8541328)
chr5 (3-90)||(12738706-12738793)
chr5 (3-90)||(12801529-12801616)
chr5 (8-91)||(18728606-18728689)
chr5 (27-78)||(27075876-27075927)
chr5 (1-60)||(42471578-42471637)
chr5 (128-222)||(30468113-30468206)
chr5 (17-91)||(32087560-32087634)
chr5 (121-222)||(12800152-12800252)
chr5 (1-90)||(17577905-17577994)
chr5 (504-539)||(40781083-40781118)
chr5 (3-60)||(30463932-30463989)
chr5 (8-77)||(38596905-38596974)
chr5 (3-90)||(28813735-28813822)
chr5 (504-539)||(29621336-29621371)
chr5 (8-91)||(35395370-35395453)
chr5 (3-62)||(43492131-43492190)
chr5 (21-91)||(43318064-43318134)
chr5 (17-78)||(19997164-19997225)
chr5 (504-540)||(32135376-32135412)
[»] chr7 (55 HSPs)
chr7 (1-441)||(20478072-20478512)
chr7 (137-438)||(56536-56837)
chr7 (1-119)||(56360-56478)
chr7 (119-223)||(27665896-27666000)
chr7 (1-119)||(27666041-27666159)
chr7 (128-223)||(29996345-29996440)
chr7 (1-115)||(29996494-29996608)
chr7 (1-90)||(20479689-20479778)
chr7 (1-90)||(35401999-35402088)
chr7 (17-121)||(37115500-37115604)
chr7 (3-90)||(35403589-35403676)
chr7 (21-115)||(6602385-6602479)
chr7 (3-121)||(24228383-24228501)
chr7 (3-121)||(39859203-39859321)
chr7 (121-222)||(46439362-46439463)
chr7 (3-121)||(30940399-30940517)
chr7 (23-121)||(34776889-34776987)
chr7 (3-121)||(38474117-38474235)
chr7 (121-215)||(47386048-47386142)
chr7 (1-90)||(27664460-27664549)
chr7 (121-222)||(35693202-35693303)
chr7 (3-122)||(13168152-13168274)
chr7 (19-121)||(45359384-45359486)
chr7 (1-90)||(77984-78073)
chr7 (121-222)||(24228241-24228342)
chr7 (121-222)||(39859062-39859162)
chr7 (121-213)||(30940266-30940358)
chr7 (17-121)||(35693344-35693450)
chr7 (121-223)||(38473974-38474076)
chr7 (129-218)||(23906098-23906186)
chr7 (27-91)||(37796185-37796249)
chr7 (20-91)||(366747-366818)
chr7 (27-78)||(7401949-7402000)
chr7 (3-90)||(13169653-13169740)
chr7 (8-107)||(45463707-45463806)
chr7 (17-120)||(47386184-47386287)
chr7 (21-91)||(33038801-33038871)
chr7 (3-90)||(39857677-39857764)
chr7 (8-91)||(46996706-46996789)
chr7 (128-222)||(13168321-13168414)
chr7 (128-222)||(45359534-45359627)
chr7 (121-214)||(6602526-6602618)
chr7 (121-222)||(37115372-37115473)
chr7 (17-90)||(47384340-47384413)
chr7 (199-335)||(23168353-23168488)
chr7 (128-212)||(48852189-48852273)
chr7 (504-539)||(56902-56937)
chr7 (18-121)||(11682828-11682931)
chr7 (504-539)||(20478574-20478609)
chr7 (21-91)||(2167529-2167599)
chr7 (27-121)||(48852321-48852415)
chr7 (34-107)||(4322560-4322633)
chr7 (17-90)||(35344295-35344368)
chr7 (21-90)||(37113991-37114060)
chr7 (8-73)||(38613503-38613568)
[»] chr6 (32 HSPs)
chr6 (1-441)||(32455545-32455985)
chr6 (1-333)||(3456778-3457110)
chr6 (119-441)||(13613195-13613517)
chr6 (1-119)||(13613558-13613676)
chr6 (3-121)||(32439065-32439183)
chr6 (121-222)||(20523557-20523658)
chr6 (3-121)||(20523398-20523516)
chr6 (1-90)||(3480627-3480716)
chr6 (1-90)||(32454278-32454367)
chr6 (1-90)||(32518467-32518556)
chr6 (17-121)||(10568445-10568549)
chr6 (17-120)||(7372933-7373036)
chr6 (24-122)||(9398713-9398811)
chr6 (121-215)||(9398851-9398945)
chr6 (128-218)||(32438920-32439010)
chr6 (121-222)||(11355413-11355513)
chr6 (42-121)||(7049828-7049907)
chr6 (188-332)||(25171832-25171975)
chr6 (3-120)||(32516909-32517026)
chr6 (8-77)||(3018450-3018519)
chr6 (17-90)||(18645074-18645147)
chr6 (17-121)||(6899531-6899635)
chr6 (128-219)||(7049955-7050046)
chr6 (8-107)||(17952030-17952129)
chr6 (3-121)||(11355254-11355372)
chr6 (121-215)||(32517068-32517162)
chr6 (17-77)||(2968185-2968245)
chr6 (129-215)||(10568598-10568684)
chr6 (20-90)||(13610739-13610808)
chr6 (1-39)||(32437170-32437208)
chr6 (504-538)||(33268241-33268275)
chr6 (3-91)||(10569888-10569976)
[»] chr2 (49 HSPs)
chr2 (1-434)||(37020538-37020971)
chr2 (1-441)||(6785655-6786095)
chr2 (1-441)||(24207725-24208156)
chr2 (3-121)||(39664742-39664860)
chr2 (3-121)||(40560255-40560373)
chr2 (121-223)||(17696397-17696499)
chr2 (128-222)||(2767132-2767226)
chr2 (121-223)||(6797698-6797800)
chr2 (3-121)||(14389078-14389196)
chr2 (3-121)||(16763108-16763226)
chr2 (121-223)||(40560414-40560516)
chr2 (1-90)||(24205628-24205717)
chr2 (3-121)||(19908240-19908358)
chr2 (1-90)||(14387379-14387468)
chr2 (1-90)||(37022155-37022244)
chr2 (18-121)||(2766981-2767084)
chr2 (128-222)||(42519056-42519151)
chr2 (3-121)||(44709739-44709857)
chr2 (1-90)||(2577450-2577539)
chr2 (121-218)||(16763266-16763363)
chr2 (5-90)||(16764581-16764666)
chr2 (3-122)||(17696238-17696357)
chr2 (20-121)||(42519199-42519301)
chr2 (121-222)||(19908099-19908199)
chr2 (20-120)||(16377192-16377292)
chr2 (132-215)||(39455371-39455454)
chr2 (128-215)||(44709604-44709691)
chr2 (3-60)||(6783396-6783453)
chr2 (1-90)||(40561848-40561937)
chr2 (8-107)||(11023001-11023100)
chr2 (3-77)||(6797539-6797613)
chr2 (230-332)||(40097848-40097948)
chr2 (23-119)||(39455221-39455317)
chr2 (257-332)||(11315073-11315148)
chr2 (121-183)||(14388975-14389037)
chr2 (17-91)||(26584821-26584895)
chr2 (8-77)||(37417310-37417379)
chr2 (121-222)||(39664601-39664701)
chr2 (27-78)||(4046352-4046403)
chr2 (233-332)||(4416688-4416785)
chr2 (504-539)||(6785557-6785592)
chr2 (3-90)||(16376768-16376855)
chr2 (3-90)||(19906714-19906801)
chr2 (20-91)||(29909664-29909735)
chr2 (504-539)||(37021041-37021076)
chr2 (3-90)||(39663186-39663273)
chr2 (34-91)||(11315339-11315396)
chr2 (21-77)||(15432378-15432434)
chr2 (3-83)||(19581446-19581526)
[»] chr1 (54 HSPs)
chr1 (1-434)||(47012743-47013176)
chr1 (1-441)||(9121335-9121762)
chr1 (49-441)||(1442599-1442990)
chr1 (119-441)||(33602258-33602579)
chr1 (20-222)||(51896017-51896227)
chr1 (1-119)||(33602620-33602738)
chr1 (1-119)||(46583532-46583650)
chr1 (119-223)||(46583387-46583491)
chr1 (3-121)||(4855940-4856058)
chr1 (3-121)||(34778112-34778230)
chr1 (129-223)||(2869778-2869872)
chr1 (121-218)||(34777975-34778072)
chr1 (1-90)||(46582040-46582129)
chr1 (3-122)||(2869611-2869730)
chr1 (3-121)||(31238469-31238587)
chr1 (1-90)||(9120069-9120158)
chr1 (17-121)||(15104487-15104591)
chr1 (121-213)||(15104632-15104724)
chr1 (3-121)||(27087315-27087433)
chr1 (1-60)||(34776599-34776658)
chr1 (3-121)||(25278342-25278460)
chr1 (1-90)||(1444151-1444240)
chr1 (1-90)||(8167972-8168061)
chr1 (1-90)||(8169538-8169627)
chr1 (1-90)||(25276772-25276861)
chr1 (129-218)||(26225390-26225479)
chr1 (121-222)||(31238328-31238428)
chr1 (1-90)||(37345932-37346021)
chr1 (1-90)||(47011486-47011575)
chr1 (121-221)||(3013303-3013403)
chr1 (3-115)||(6818658-6818770)
chr1 (1-60)||(26223617-26223676)
chr1 (3-121)||(37344374-37344492)
chr1 (121-218)||(27087473-27087570)
chr1 (1-90)||(27089249-27089338)
chr1 (17-114)||(50556078-50556175)
chr1 (17-118)||(3013447-3013554)
chr1 (1-60)||(4854440-4854499)
chr1 (128-218)||(4855805-4855893)
chr1 (3-73)||(25278975-25279045)
chr1 (121-222)||(6818511-6818611)
chr1 (1-88)||(33599248-33599335)
chr1 (121-215)||(37344533-37344627)
chr1 (21-91)||(42134532-42134602)
chr1 (34-107)||(5783427-5783500)
chr1 (21-77)||(18183961-18184017)
chr1 (17-77)||(36895528-36895588)
chr1 (504-539)||(1443053-1443088)
chr1 (504-539)||(9121238-9121273)
chr1 (504-539)||(33602161-33602196)
chr1 (504-539)||(47012638-47012673)
chr1 (17-90)||(27940654-27940727)
chr1 (128-213)||(50555939-50556023)
chr1 (17-62)||(52643648-52643693)
[»] chr8 (66 HSPs)
chr8 (1-441)||(27406571-27407011)
chr8 (1-441)||(15305827-15306267)
chr8 (1-441)||(15486196-15486636)
chr8 (1-119)||(27691184-27691302)
chr8 (119-222)||(27691343-27691446)
chr8 (119-220)||(33708658-33708759)
chr8 (14-119)||(33708800-33708905)
chr8 (3-121)||(8609781-8609899)
chr8 (3-121)||(13108330-13108448)
chr8 (3-121)||(13282510-13282628)
chr8 (3-121)||(38547260-38547378)
chr8 (3-121)||(42941806-42941924)
chr8 (129-223)||(42941973-42942067)
chr8 (1-90)||(601674-601763)
chr8 (121-218)||(5036640-5036737)
chr8 (17-121)||(9673159-9673263)
chr8 (17-121)||(41825638-41825742)
chr8 (17-120)||(22272382-22272485)
chr8 (121-220)||(41042438-41042537)
chr8 (3-121)||(26242308-26242426)
chr8 (3-121)||(41042578-41042696)
chr8 (121-218)||(13108193-13108290)
chr8 (1-90)||(33761099-33761188)
chr8 (1-90)||(33762683-33762772)
chr8 (17-121)||(13486093-13486197)
chr8 (1-60)||(15308261-15308320)
chr8 (1-60)||(15488630-15488689)
chr8 (1-60)||(29237181-29237240)
chr8 (1-60)||(29239187-29239246)
chr8 (1-90)||(13283965-13284054)
chr8 (1-90)||(27692807-27692896)
chr8 (1-90)||(33707236-33707325)
chr8 (1-90)||(35509244-35509333)
chr8 (1-90)||(38548801-38548890)
chr8 (121-218)||(40339536-40339633)
chr8 (1-60)||(13106834-13106893)
chr8 (128-222)||(13485953-13486045)
chr8 (3-121)||(7745106-7745224)
chr8 (1-90)||(8608267-8608357)
chr8 (121-215)||(8609647-8609741)
chr8 (121-221)||(9673012-9673118)
chr8 (1-90)||(35510789-35510878)
chr8 (1-60)||(27404240-27404299)
chr8 (3-90)||(42943396-42943483)
chr8 (121-218)||(38547418-38547513)
chr8 (188-357)||(11721465-11721633)
chr8 (17-77)||(5036491-5036551)
chr8 (3-90)||(26238758-26238845)
chr8 (35-118)||(40339677-40339760)
chr8 (17-91)||(11788367-11788441)
chr8 (17-91)||(31821464-31821538)
chr8 (17-107)||(40020623-40020713)
chr8 (34-91)||(37526027-37526084)
chr8 (244-332)||(9184700-9184788)
chr8 (7-107)||(28433704-28433804)
chr8 (7-91)||(33750388-33750472)
chr8 (504-539)||(15306330-15306365)
chr8 (504-539)||(15486699-15486734)
chr8 (3-90)||(22273861-22273948)
chr8 (504-539)||(27406473-27406508)
chr8 (3-90)||(41823922-41824009)
chr8 (8-91)||(42897778-42897861)
chr8 (8-90)||(31201148-31201230)
chr8 (34-91)||(9184446-9184503)
chr8 (3-52)||(34681074-34681123)
chr8 (128-219)||(41825498-41825590)
[»] chr4 (53 HSPs)
chr4 (121-427)||(35404077-35404378)
chr4 (1-119)||(43519454-43519572)
chr4 (119-220)||(43519613-43519714)
chr4 (121-222)||(11255772-11255873)
chr4 (3-119)||(49523156-49523272)
chr4 (3-121)||(41761720-41761838)
chr4 (1-90)||(4173710-4173799)
chr4 (1-90)||(43507197-43507286)
chr4 (1-90)||(43508623-43508712)
chr4 (1-90)||(5437841-5437930)
chr4 (1-90)||(33265980-33266069)
chr4 (121-218)||(51012116-51012213)
chr4 (257-343)||(25993826-25993912)
chr4 (128-222)||(41761578-41761672)
chr4 (121-219)||(41781730-41781828)
chr4 (1-90)||(833253-833342)
chr4 (1-90)||(5439617-5439706)
chr4 (25-121)||(51011980-51012076)
chr4 (3-121)||(41781571-41781689)
chr4 (1-90)||(319303-319392)
chr4 (1-90)||(835012-835101)
chr4 (1-90)||(33264412-33264501)
chr4 (20-121)||(42980684-42980785)
chr4 (1-90)||(51013856-51013945)
chr4 (128-215)||(49523322-49523409)
chr4 (3-121)||(35404419-35404537)
chr4 (128-213)||(42980833-42980918)
chr4 (14-90)||(4169729-4169805)
chr4 (17-121)||(48646721-48646825)
chr4 (8-107)||(39083676-39083775)
chr4 (128-219)||(48646582-48646673)
chr4 (128-218)||(52868005-52868094)
chr4 (1-90)||(320870-320959)
chr4 (121-219)||(2693087-2693186)
chr4 (8-107)||(5484577-5484676)
chr4 (128-215)||(11601868-11601955)
chr4 (3-90)||(35401781-35401868)
chr4 (3-90)||(39345596-39345683)
chr4 (8-107)||(39921531-39921630)
chr4 (8-107)||(43779855-43779954)
chr4 (45-87)||(11601744-11601786)
chr4 (8-105)||(39189419-39189516)
chr4 (8-77)||(44558511-44558580)
chr4 (17-90)||(44794765-44794838)
chr4 (21-121)||(48813837-48813937)
chr4 (34-77)||(27624869-27624912)
chr4 (8-107)||(32652136-32652235)
chr4 (25-60)||(43521109-43521144)
chr4 (8-107)||(44994275-44994374)
chr4 (17-91)||(35996109-35996183)
chr4 (17-90)||(47941857-47941930)
chr4 (35-91)||(2827468-2827524)
chr4 (17-77)||(13450998-13451058)
[»] chr3 (76 HSPs)
chr3 (268-437)||(19987254-19987426)
chr3 (1-119)||(3152214-3152332)
chr3 (119-222)||(44794396-44794499)
chr3 (14-119)||(19987590-19987695)
chr3 (119-222)||(2660401-2660504)
chr3 (4-119)||(44794240-44794355)
chr3 (1-119)||(2660242-2660360)
chr3 (119-240)||(19987430-19987552)
chr3 (3-121)||(53190753-53190871)
chr3 (121-222)||(23293022-23293123)
chr3 (121-222)||(44276048-44276149)
chr3 (3-121)||(21348755-21348873)
chr3 (3-121)||(27899075-27899193)
chr3 (121-222)||(17515501-17515602)
chr3 (121-218)||(35905569-35905666)
chr3 (1-90)||(46308837-46308926)
chr3 (2-121)||(23293164-23293283)
chr3 (3-121)||(2226146-2226264)
chr3 (3-121)||(35905706-35905824)
chr3 (3-121)||(41977782-41977900)
chr3 (3-121)||(51684642-51684760)
chr3 (1-90)||(38191925-38192014)
chr3 (1-90)||(38193480-38193569)
chr3 (1-90)||(53094243-53094332)
chr3 (1-90)||(53187772-53187861)
chr3 (121-218)||(54898627-54898724)
chr3 (1-90)||(54900044-54900133)
chr3 (5-121)||(30599912-30600028)
chr3 (1-88)||(3150282-3150369)
chr3 (1-60)||(41979352-41979411)
chr3 (3-121)||(17515342-17515460)
chr3 (129-218)||(7884730-7884819)
chr3 (1-90)||(46310406-46310495)
chr3 (1-86)||(46609179-46609264)
chr3 (1-90)||(53092653-53092742)
chr3 (121-218)||(53190616-53190713)
chr3 (122-218)||(2226009-2226105)
chr3 (119-179)||(3152113-3152173)
chr3 (14-90)||(46611273-46611349)
chr3 (3-107)||(54898469-54898573)
chr3 (3-121)||(43765169-43765287)
chr3 (121-219)||(43765328-43765426)
chr3 (121-222)||(27898934-27899034)
chr3 (1-90)||(28626441-28626530)
chr3 (17-121)||(2377075-2377179)
chr3 (17-121)||(42279553-42279657)
chr3 (1-88)||(2661880-2661967)
chr3 (128-218)||(41977947-41978035)
chr3 (1-60)||(44795890-44795949)
chr3 (119-218)||(46112676-46112775)
chr3 (121-219)||(600900-600998)
chr3 (1-90)||(7883358-7883447)
chr3 (3-90)||(23291602-23291689)
chr3 (8-87)||(23774189-23774268)
chr3 (1-60)||(35903855-35903914)
chr3 (128-219)||(51684808-51684899)
chr3 (49-115)||(7884873-7884939)
chr3 (121-183)||(30599809-30599871)
chr3 (17-118)||(46197766-46197867)
chr3 (27-91)||(25535253-25535317)
chr3 (25-121)||(48830800-48830896)
chr3 (176-223)||(3151698-3151745)
chr3 (46-121)||(44276190-44276265)
chr3 (3-90)||(46112519-46112606)
chr3 (128-219)||(48830661-48830752)
chr3 (29-91)||(23876982-23877044)
chr3 (128-222)||(46197918-46198012)
chr3 (17-91)||(48633923-48633997)
chr3 (3-90)||(611192-611279)
chr3 (3-90)||(2378953-2379040)
chr3 (8-91)||(23888776-23888859)
chr3 (8-91)||(40508915-40508998)
chr3 (20-91)||(45898352-45898423)
chr3 (21-91)||(33113184-33113254)
chr3 (123-200)||(21348916-21348993)
chr3 (188-332)||(54092945-54093088)
[»] scaffold0058 (5 HSPs)
scaffold0058 (1-119)||(3324-3442)
scaffold0058 (1-119)||(4496-4614)
scaffold0058 (119-223)||(3483-3587)
scaffold0058 (119-223)||(4655-4759)
scaffold0058 (1-90)||(14313-14402)
[»] scaffold0564 (1 HSPs)
scaffold0564 (121-218)||(8451-8548)
[»] scaffold1712 (1 HSPs)
scaffold1712 (1-90)||(1012-1101)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-90)||(54228-54317)
[»] scaffold1454 (2 HSPs)
scaffold1454 (17-115)||(1309-1407)
scaffold1454 (128-218)||(1460-1550)
[»] scaffold0024 (1 HSPs)
scaffold0024 (128-180)||(37402-37454)


Alignment Details
Target: chr5 (Bit Score: 389; Significance: 0; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Complemental strand, 29621875 - 29621435
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  29621875 tgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtc 29621776  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29621775 cgttaatagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 29621676  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  29621675 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtc 29621576  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29621575 accctcttcacttcaccaaaatcatcatcatcatcggcgatcatccttggaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagcca 29621476  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    || ||||||||||||||||||||||| ||||||| ||||||    
T  29621475 ttaaactttgttttccattcactcttattcgtttgtccctg 29621435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 1 - 434
Target Start/End: Original strand, 40780580 - 40781013
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  40780580 tgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgtccaaaatgtc 40780679  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    |||||  ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  40780680 cgttaacagtgatgatgtgtcagccacgtgtacagggactaaactgatggaaattgtcaaaatttgatatttaacatttcagtctcttttttcctgtgtt 40780779  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40780780 ttcaattatacccttctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtc 40780879  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40780880 accctcttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagcca 40780979  T
Q  401 ttcaactttgttttccattcactcttgttcgttt 434  Q
    |||||||||||||||| |||||||||||||||||    
T  40780980 ttcaactttgttttcctttcactcttgttcgttt 40781013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Complemental strand, 42473701 - 42473261
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  42473701 tgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacagacgtccatcaaatcagtccttccgtccaaaatgtc 42473602  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    |||||  ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| | | ||||||||||||| || |||||||||||||    
T  42473601 cgttaacagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaatggtcaaaattcaaaaattaacatttcagtttcatttttcctgtgtt 42473502  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42473501 tccaattatacccctctattaccattcactttcatcctcagattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 42473402  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  42473401 accctcttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtaacgcca 42473302  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    |||||||| |||||||||||||  |||||||||| ||||||    
T  42473301 ttcaacttcgttttccattcaccgttgttcgtttatccctg 42473261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 128 - 440
Target Start/End: Complemental strand, 32135775 - 32135462
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctct-attaccatt 226  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||||| |||| ||||    
T  32135775 gtgtacaaggactaaattgatggaaatagtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctcttattatcatt 32135676  T
Q  227 cactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatc 326  Q
      |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  32135675 gcctttcatcctcacattttcactcaaaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcaccctctccgcttctccaaaatcatc 32135576  T
Q  327 atcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaactttgttttccattcactctt 426  Q
    ||||||| |||| ||||  ||| |||||||| ||||||||||||||| |||  |||||||||||||||  |||||||||||| |||||||||||||||||    
T  32135575 atcatcaccggcaatcaaccttagaaaagatacggttttgaagtcagtttttttggtttgtcaaggtaacgccattcaacttcgttttccattcactctt 32135476  T
Q  427 gttcgtttctccct 440  Q
    ||||||||||||||    
T  32135475 gttcgtttctccct 32135462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 2854263 - 2854160
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  2854263 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcagtat-ttttttcctgtgtttccaattatacccctcta 2854165  T
Q  219 ttacc 223  Q
    |||||    
T  2854164 ttacc 2854160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 24541146 - 24541043
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    ||||||||  ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  24541146 gtcagccacatgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcagtcttttttttcctatgtttccaattatacccctcta 24541047  T
Q  219 ttac 222  Q
    ||||    
T  24541046 ttac 24541043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 2854420 - 2854303
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||| |||| |||    
T  2854420 tgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtccaacaaattcgtccctccgtccaaaaggtc 2854322  T
Q  101 cgttagtagtgatgatgtg 119  Q
    | ||| |||||||||||||    
T  2854321 cattaatagtgatgatgtg 2854303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24541306 - 24541187
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa-tcagtccctccgtctaaaatgt 99  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||   |||||||| |||| ||    
T  24541306 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcatctcctccgtccaaaaggt 24541207  T
Q  100 ccgttagtagtgatgatgtg 119  Q
    |  ||| |||||||||||||    
T  24541206 ctattaatagtgatgatgtg 24541187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 17574350 - 17574468
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||    
T  17574350 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccg 17574449  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  17574450 ttagtggtgatgacgtgtc 17574468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 3 - 122
Target Start/End: Complemental strand, 36057705 - 36057586
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || |||||||||||||||| ||||||||| | |||| |||||||||||||||||||||||||||   ||||||||||| ||||  ||||    
T  36057705 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccg 36057606  T
Q  103 ttagtagtgatgatgtgtca 122  Q
    ||| | ||||||||||||||    
T  36057605 ttaatggtgatgatgtgtca 36057586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 34327826 - 34327927
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| |||| || |  |||||||||||||||||||||||||||||||||    
T  34327826 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcggtgtaatttttcctgtgtttccaattatacccctctatt 34327925  T
Q  221 ac 222  Q
    ||    
T  34327926 ac 34327927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 8539866 - 8539968
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||| ||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||| ||||||||||||||||||||||||||    
T  8539866 cagccacgtgtgcaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcatgtgtttccaattatacccctctatt 8539965  T
Q  221 acc 223  Q
    |||    
T  8539966 acc 8539968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 17574508 - 17574605
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  17574508 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctgtgtttccaattatacccctcta 17574605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40782270 - 40782181
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  40782270 tgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 40782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 7267875 - 7267993
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||| | || |||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||    |||||||||| ||||  ||||    
T  7267875 aaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatgatccctccgtccaaaagctccg 7267974  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  7267975 ttagtggtgatgacgtgtc 7267993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 7268033 - 7268130
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||| | |  |||||||||||||||||||||||||||||||    
T  7268033 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgaaacttaacttttcaatataatttttcctgtgtttccaattatacccctcta 7268130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 29620168 - 29620257
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||   | | ||| ||||||| |||||||||||    
T  29620168 tgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtcaatcaaattagtccctccgt 29620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 34327668 - 34327785
Alignment:
Q  4 aaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgt 103  Q
    ||||| ||| || |||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||| ||||||| ||||  || ||    
T  34327668 aaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtctctccgtccaaaagctctgt 34327767  T
Q  104 tagtagtgatgatgtgtc 121  Q
    |||| |||||||||||||    
T  34327768 tagtggtgatgatgtgtc 34327785  T

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Target: chr5; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 18625086 - 18624982
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    ||||||||||||||||  |||||||| | |||||||||||||||||||  |||||||||||   |||| |||||| ||||  ||||||||||||||||||    
T  18625086 ttcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttagtagtgatgat 18624987  T
Q  117 gtgtc 121  Q
    |||||    
T  18624986 gtgtc 18624982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 21841182 - 21841276
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||| | |  ||||||||||||||||||||||||||||    
T  21841182 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcaatataatttttcctgtgtttccaattatacccct 21841276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 7269503 - 7269446
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7269503 aaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 30468358 - 30468254
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    |||||| || |||||| ||||||||| | ||||||| ||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||     
T  30468358 ttcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgac 30468259  T
Q  117 gtgtc 121  Q
    |||||    
T  30468258 gtgtc 30468254  T

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Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 2852918 - 2853005
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | ||| |||||||||||||||||||    
T  2852918 aaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatcaaatcagtccctccgt 2853005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 18624934 - 18624849
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 213  Q
    |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| || |||||  |||||||||||||||||||    
T  18624934 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtcattttttatgtgtttccaattataccc 18624849  T

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Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21843051 - 21842962
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||| |||| |||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  21843051 tgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 21842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 2179819 - 2179931
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || ||||||||||||||||  |||||||| | ||| |||||||||||||||||| |||||||||   ||||||||||| ||||  |||     
T  2179819 aaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatccatcaaaatggtccctccgtccaaaagctcca 2179918  T
Q  103 ttagtagtgatga 115  Q
    ||||| |||||||    
T  2179919 ttagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 12737329 - 12737429
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  |||||| |||| |||||||||||||||||||||    
T  12737329 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcatgtg-ttccaattatacccctctatt 12737427  T
Q  221 ac 222  Q
    ||    
T  12737428 ac 12737429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 8539729 - 8539825
Alignment:
Q  25 tgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 121  Q
    |||||||| ||||||||| | ||||||||||||||||||| ||||||||||||  |||| |||| || ||||  |||||||||  ||||| ||||||    
T  8539729 tgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatagtcgctccatccaaaagctccgttagtgttgatggtgtgtc 8539825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 8541328 - 8541241
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || |||||||||||||||| ||||||||| | ||||||| |||||||   | | ||| |||||||||||||||||||    
T  8541328 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgt 8541241  T

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Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 12738793 - 12738706
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | ||| |||||||||||||||||||    
T  12738793 aaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 12738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 12801616 - 12801529
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | ||| |||||||||||||||||||    
T  12801616 aaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 12801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 18728689 - 18728606
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||||    
T  18728689 tcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtc 18728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 27075876 - 27075927
Alignment:
Q  27 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 78  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaat 27075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 42471578 - 42471637
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| |||| | |||||||    
T  42471578 tgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacatgaattt 42471637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 30468206 - 30468113
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 222  Q
    |||||||||||||||  |||||||||| || |||||| || ||||||| ||||||| |  |||||| |||| ||||||||||||||| |||||||    
T  30468206 gtgtacaaggactaatttgatggaaatggtaaaaatttgagatttaacttttcagtgtaatttttcatgtg-ttccaattataccccgctattac 30468113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 32087560 - 32087634
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||||| |||| | ||||||||||| ||||||||| |||||| |||||||||||||||   |||||||||||    
T  32087560 ttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtc 32087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 12800152 - 12800252
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||  |||||| ||| || ||||||||| |||| || ||||| | |  |||||| |||| |||||||||||||||||||||    
T  12800152 cagccacgtgtacaaggactaatttgatggcaatggtaaaaattcgagatttgacttttcaatgtaatttttcatgtg-ttccaattatacccctctatt 12800250  T
Q  221 ac 222  Q
    ||    
T  12800251 ac 12800252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 17577994 - 17577905
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||||||||  ||||| |||||||||||| | ||||||||||||||| | |||||||   | | ||| |||||||||||||||||||    
T  17577994 tgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaatcaaatcagtccctccgt 17577905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 40781083 - 40781118
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    ||||||||||||||||||||||||||||||||||||    
T  40781083 acttcatatcatgtttcgttgctgtttgtttgtgat 40781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 30463932 - 30463989
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||    
T  30463932 aaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 38596905 - 38596974
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||   ||||||||||||||    
T  38596905 tcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaa 38596974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 28813822 - 28813735
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||| ||| || ||||||| |||||||| ||||||||| | |||||||||||||||   | | ||  |||||||||||||||||||    
T  28813822 aaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatttacaaaatgtaaatcaaatcagtccctccgt 28813735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 29621371 - 29621336
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    ||||||||||||||||||||| ||||||||||||||    
T  29621371 acttcatatcatgtttcgttgttgtttgtttgtgat 29621336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 35395370 - 35395453
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| || ||||||||| |||| | ||||||||||| ||||| |||||||||   ||||||||||||||   |||||||||||    
T  35395370 tcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaaggtccctccgtc 35395453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 43492190 - 43492131
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 62  Q
    ||||||| || || ||| |||||||||||| ||||||||| | |||||||||||||||||    
T  43492190 aaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 43318134 - 43318064
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| |||| | ||||||||||| |||||||||||||||  ||||||||||| |||   |||||||||||    
T  43318134 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggtccctccgtc 43318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 19997164 - 19997225
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 78  Q
    ||||||||  |||||||| ||||||||||||| | ||||||||| |||||| | ||||||||    
T  19997164 ttcgtccccaaatttttcaaaatatcaaattacttcctgaatttaacagacattcatcaaat 19997225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 504 - 540
Target Start/End: Complemental strand, 32135412 - 32135376
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgatg 540  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  32135412 acttcatatcatgtttcattgatgtttgtttgtgatg 32135376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 385; Significance: 0; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 20478072 - 20478512
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  20478072 tgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtc 20478171  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20478172 cgttaatagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 20478271  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  20478272 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtc 20478371  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20478372 accctcttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagcca 20478471  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    || ||||||||||||||||||||||||||||||| ||||||    
T  20478472 ttaaactttgttttccattcactcttgttcgtttgtccctg 20478512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 137 - 438
Target Start/End: Original strand, 56536 - 56837
Alignment:
Q  137 gactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactttcatc 236  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  56536 gactaaattgatggaaatggtcaaaattcgatatttaacatttcagtctcttttttcctgtgttttcaattatacccctctattaccattctctttcatc 56635  T
Q  237 ctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatcg 336  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||| ||    
T  56636 ctcacattttcactcagaagcatcaaacatgtccctagcctttcaccttcccgcctaaattgtcaccctcttcacttcaccaaaatcatcatcatcaccg 56735  T
Q  337 gcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaactttgttttccattcactcttgttcgtttct 436  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56736 gcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaactttgttttccattcactcttgttcgtttct 56835  T
Q  437 cc 438  Q
    ||    
T  56836 cc 56837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 56360 - 56478
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  56360 tgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaattcactccctccgtccaaaatgtc 56459  T
Q  101 cgttagtagtgatgatgtg 119  Q
     ||||||||||||||||||    
T  56460 tgttagtagtgatgatgtg 56478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 27666000 - 27665896
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27666000 gtcagccacgtgtacaaggactaaattgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgttttcaattatacccctcta 27665901  T
Q  219 ttacc 223  Q
    |||||    
T  27665900 ttacc 27665896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27666159 - 27666041
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| | |    
T  27666159 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgtccaaaaggcc 27666060  T
Q  101 cgttagtagtgatgatgtg 119  Q
    ||||| |||||||||||||    
T  27666059 cgttaatagtgatgatgtg 27666041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 128 - 223
Target Start/End: Complemental strand, 29996440 - 29996345
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattacc 223  Q
    |||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29996440 gtgtacaaggactaaattgatggaaatggtcaaaattcaatatttaacatttcagtctcttttttcctgtgtttccaattatactcctctattacc 29996345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29996608 - 29996494
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||  ||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||  |||||||| || |||| |||    
T  29996608 tgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtccatcaaattcgtccctccatccaaaaggtc 29996509  T
Q  101 cgttagtagtgatga 115  Q
    ||||| |||||||||    
T  29996508 cgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 20479778 - 20479689
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  20479778 tgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 20479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 35401999 - 35402088
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  35401999 tgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 35402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 37115604 - 37115500
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    ||||| |||||||||| | ||||||| | ||||| ||||||||||||||||||||||||||  |||||||||||| ||||  ||||||||| ||||||||    
T  37115604 ttcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtccatcaaaatagtccctccgtccaaaagctccgttagtggtgatgat 37115505  T
Q  117 gtgtc 121  Q
    |||||    
T  37115504 gtgtc 37115500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 35403676 - 35403589
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  35403676 aaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 35403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 6602385 - 6602479
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 115  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6602385 tccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 24228501 - 24228383
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||| ||| || |||||||||||||||| ||||||||| | |||||| |||||||||||||||||||||||||   |||||| |||| ||||  |||     
T  24228501 aaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagctcca 24228402  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  24228401 ttagtggtgatgatgtgtc 24228383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 39859321 - 39859203
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || || ||||||||||||| ||||||||| | ||||||| |||||||||||||||||| |||||   ||||||||||| ||||  ||||    
T  39859321 aaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgtccaaaagctccg 39859222  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  39859221 ttagtggtgatgacgtgtc 39859203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 46439463 - 46439362
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| ||||||| |||||||| |||||||||| || ||||||||| ||||||| ||||| | |  |||||||||||||||||||||||| ||||||||    
T  46439463 cagccacgtgtacatggactaaattgatggaaatggtaaaaattcgagatttaacttttcaatgtaatttttcctgtgtttccaattatacacctctatt 46439364  T
Q  221 ac 222  Q
    ||    
T  46439363 ac 46439362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 30940517 - 30940399
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || |||||| || |||||| ||||||||| | ||||||||||||||||||| |||| |||||||   ||| ||||||| ||||  ||||    
T  30940517 aaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgttcatcaaaatggtctctccgtccaaaagctccg 30940418  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  30940417 ttagtggtgatgatgtgtc 30940399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 34776987 - 34776889
Alignment:
Q  23 cctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 121  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  |||||||||  |||||| |||||    
T  34776987 cctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaaactccgttagtgatgatgacgtgtc 34776889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 38474235 - 38474117
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||||||||||||| ||||||||| | ||||||| ||||||||||||||| | ||||||   |||| |||||| ||||  ||||    
T  38474235 aaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcctatcaaaatggtccatccgtccaaaagctccg 38474136  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  38474135 ttagtggtgatgatgtgtc 38474117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 47386142 - 47386048
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||| || ||||||||||||||||||    
T  47386142 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcagtgtaatttttcttgggtttccaattatacccct 47386048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27664460 - 27664549
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  27664460 tgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 27664549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 35693303 - 35693202
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| ||||| |||| || || |||||| ||||||| ||||||| |  |||||| ||||||||||||||||||| ||||||    
T  35693303 cagccacgtgtacaaggactaaattgatgaaaatggtaaagattcgagatttaacttttcagtataatttttcatgtgtttccaattatacccatctatt 35693204  T
Q  221 ac 222  Q
    ||    
T  35693203 ac 35693202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 13168152 - 13168274
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccct---gaattttacagacgtccatcaaatcagtccctccgtctaaaatgt 99  Q
    |||||||||| || ||||||| |||||||| ||||||||| | |||||||||   |||||||||||||||||||||||   |||| |||||| ||||  |    
T  13168152 aaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccgtccaaaagct 13168251  T
Q  100 ccgttagtagtgatgatgtgtca 122  Q
    |||||||| ||||||| ||||||    
T  13168252 ccgttagtggtgatgacgtgtca 13168274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 121
Target Start/End: Original strand, 45359384 - 45359486
Alignment:
Q  19 cgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 118  Q
    ||||| |||||||| ||||||||| | ||||||| ||||||||||||||||||||||||   |||||||| || ||||  ||||||||| ||||||| ||    
T  45359384 cgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgacgt 45359483  T
Q  119 gtc 121  Q
    |||    
T  45359484 gtc 45359486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 78073 - 77984
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||   | | | | |||||||||||||||||||    
T  78073 tgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgccaatcaaatcagtccctccgt 77984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 24228342 - 24228241
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||| | ||||||| |||||||||| || |||||| || ||||||  |||||||||  ||||| |||||||| ||||||||||||||||||    
T  24228342 cagccacgtgtacgaagactaaattgatggaaattgtaaaaatttgagatttaatttttcagtctaattttttctgtgttttcaattatacccctctatt 24228243  T
Q  221 ac 222  Q
    ||    
T  24228242 ac 24228241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 39859162 - 39859062
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  |||||||||||||| ||||||||||||||||||    
T  39859162 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcctgtgttt-caattatacccctctatt 39859064  T
Q  221 ac 222  Q
    ||    
T  39859063 ac 39859062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 30940358 - 30940266
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 213  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| |||| || |  ||||| |||||||| |||||||||||    
T  30940358 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcggtgtaattttttctgtgttttcaattataccc 30940266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 35693450 - 35693344
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatca--aattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 114  Q
    ||||||| |||||||| || ||||||   ||||||||||||||||||||||||||||||||||   |||||||| || ||||  || |||||| ||||||    
T  35693450 ttcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatg 35693351  T
Q  115 atgtgtc 121  Q
    |||||||    
T  35693350 atgtgtc 35693344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 38474076 - 38473974
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||| |||||||| || |||||||||| || ||||||| | ||||||| ||||||| |  ||||| ||||||||||||||||| | |||||||    
T  38474076 cagccacgtgtgcaaggactgaattgatggaaatggtaaaaattcaagatttaacttttcagtgtaattttttctgtgtttccaattatatctctctatt 38473977  T
Q  221 acc 223  Q
    |||    
T  38473976 acc 38473974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 23906186 - 23906098
Alignment:
Q  129 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    ||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |   |||||  |||||||||||||||||||||||    
T  23906186 tgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcagtgt-aattttctcgtgtttccaattatacccctcta 23906098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 37796249 - 37796185
Alignment:
Q  27 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    |||||| ||||||||| | |||||||||||||||||| |||||||||||||  ||||||||||||    
T  37796249 aattttgcgaaatatctatttagtccctgaattttacggacgtccatcaaaatagtccctccgtc 37796185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 366747 - 366818
Alignment:
Q  20 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    |||||| | ||||| |||||||||||||||||||||||||| ||||||||| |||||||   ||||||||||    
T  366747 gtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtc 366818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 7401949 - 7402000
Alignment:
Q  27 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 78  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  7401949 aatttatcgaaatatcaaattcgtccctgaatttaacagacgtccatcaaat 7402000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 13169740 - 13169653
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || || ||||||||||||| ||||||||| | |||||||||||||||   | | ||| |||||||||||||||||||    
T  13169740 aaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 13169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 45463707 - 45463806
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  45463707 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 45463806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 47386287 - 47386184
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    ||||||| |||||||| ||||||||  | |||||| || ||||||||||||||||||||||   |||  |||||| ||||  ||||||||| ||||||||    
T  47386287 ttcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtccatcaaaatggtcattccgtccaaaagctccgttagtggtgatgat 47386188  T
Q  117 gtgt 120  Q
    ||||    
T  47386187 gtgt 47386184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 33038871 - 33038801
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||   |||||||||||    
T  33038871 tccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaaggtccctccgtc 33038801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 39857677 - 39857764
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||  || |||||||||||||||| ||||||||| | |||||||| ||||||   | | ||| |||||||||||||||||||    
T  39857677 aaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaatcaaatcagtccctccgt 39857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 46996789 - 46996706
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| || ||||||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||   |||||||||||    
T  46996789 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaaggtccctccgtc 46996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 13168321 - 13168414
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 222  Q
    |||||||||||||||  |||||||||| || ||||||||| |||| |  ||||| | |  ||||| ||||| |||||||||||||||||||||||    
T  13168321 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgaattttcaatgtaattttttctgtg-ttccaattatacccctctattac 13168414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 45359534 - 45359627
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 222  Q
    |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  ||||||||||| ||||||||||||||  |||||||    
T  45359534 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcctgtg-ttccaattatacccagctattac 45359627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 6602526 - 6602618
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccc 214  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||| | ||||||| |  |||||| |||  |||||||||||||||    
T  6602526 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttatcttttcagtgtaatttttcttgt-attccaattatacccc 6602618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 37115473 - 37115372
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||| | | ||| |||| || ||||||||| ||||||| ||| ||| |  ||||| | || |||| |||||||||||||||||    
T  37115473 cagccacgtgtacaaggactatattaatgaaaatggtaaaaattcgagatttaactttttagtgtaattttttccgtatttcaaattatacccctctatt 37115374  T
Q  221 ac 222  Q
    ||    
T  37115373 ac 37115372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 47384340 - 47384413
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||| |||||||| ||||||||| |||||||||| ||||||   | | ||| |||||||||||||||||||    
T  47384340 ttcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgtcaatcaaatcagtccctccgt 47384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 335
Target Start/End: Original strand, 23168353 - 23168488
Alignment:
Q  199 tttccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccg 298  Q
    ||||||||| |||||||||||||||  |  ||| |||||||||| |||||||||||  |||||||||  ||  | ||||||| ||||||||   |||||     
T  23168353 tttccaattttacccctctattacccataccttccatcctcaca-tttcactcagacacatcaaacacatcattgacctttctccttcccgttaaaacct 23168451  T
Q  299 tcatcctcttcacttcaccaaaatcatcatcatcatc 335  Q
    | | | |||| || || ||||||||||||||||||||    
T  23168452 ttaccatcttaacctctccaaaatcatcatcatcatc 23168488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 48852273 - 48852189
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacc 212  Q
    ||||||||| |||||  |||||||||| || ||||||| |  |||||| ||| ||| || ||||| |||||||||||||||||||    
T  48852273 gtgtacaagaactaatttgatggaaatggtaaaaattccagttttaactttttagtgtcattttttctgtgtttccaattatacc 48852189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 56902 - 56937
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    ||||||||||||||||||||| ||||||||||||||    
T  56902 acttcatatcatgtttcgttgatgtttgtttgtgat 56937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 11682828 - 11682931
Alignment:
Q  18 tcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatg 117  Q
    |||||||| |||| | | ||||||||||||||||| ||||||    ||||||||||||| | |||||||||||| ||  | || |||||| ||||||| |    
T  11682828 tcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtccaatctctctgttagtggtgatgagg 11682927  T
Q  118 tgtc 121  Q
    ||||    
T  11682928 tgtc 11682931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 20478574 - 20478609
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    ||||||||||||||||||||| ||||||||||||||    
T  20478574 acttcatatcatgtttcgttgttgtttgtttgtgat 20478609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 2167529 - 2167599
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||| ||||||||   |||||||||||    
T  2167529 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtc 2167599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 48852415 - 48852321
Alignment:
Q  27 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 121  Q
    |||||| | ||||||| | ||| ||| ||||||||||||||||||||||||   ||| ||| ||| ||||  || |||||| |||||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgtgtc 48852321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 4322633 - 4322560
Alignment:
Q  34 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    |||||||||||| ||||||||||||||    ||| |||||||| |  ||||||||||| |||| ||||||||||    
T  4322633 cgaaatatcaaaatagtccctgaatttgtttgacatccatcaatttcgtccctccgtccaaaaggtccgttagt 4322560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 35344368 - 35344295
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||||   ||||||||||    
T  35344368 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 37113991 - 37114060
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||| | ||||||||| |||||   | | ||| |||||||||||||||||||    
T  37113991 tccctgaattttgcgaaatatctatttagtccctaaatttacaaaatgtcaatcaaatcagtccctccgt 37114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 38613568 - 38613503
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 73  Q
    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||    
T  38613568 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 38613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 369; Significance: 0; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Complemental strand, 32455985 - 32455545
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  32455985 tgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtc 32455886  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  32455885 cgttaataatgatgatgtgtcagccacgtgtacaaggactaaactgatggaaattatcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 32455786  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  32455785 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtt 32455686  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  32455685 accctcttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcgattttgaagtcagattttgtggtttgtcaaggtatagcca 32455586  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  32455585 ttcaactttgttttccattcactcttgttcgtttgtccctg 32455545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 3456778 - 3457110
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||    
T  3456778 tgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatatc 3456877  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3456878 cgttaatagtgatgatatgtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 3456977  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  3456978 tccaattatacccctctattaccattcactttcatcctcacattttcactcataagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtc 3457077  T
Q  301 atcctcttcacttcaccaaaatcatcatcatca 333  Q
    | |||||||||||||||||||||||||||||||    
T  3457078 accctcttcacttcaccaaaatcatcatcatca 3457110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 119 - 441
Target Start/End: Complemental strand, 13613517 - 13613195
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    ||||||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13613517 gtcagccatgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacatttcagtctcttttttcctgtgtttcaaattatacccctcta 13613418  T
Q  219 ttaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcacca 318  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||    
T  13613417 ttaccattttctttcatcctcacattttcactcagaaccatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcaccctctacacttctcca 13613318  T
Q  319 aaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaactttgttttccat 418  Q
    |||| || ||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  13613317 aaattattatcatcaccggcgatcaaccttggaaaatattcggttttgaagtcagatttcgtggtttgtcaaggtaacaccattcaactttgttttccat 13613218  T
Q  419 tcactcttgttcgtttctccctg 441  Q
    ||||| ||||| |||||||||||    
T  13613217 tcacttttgtttgtttctccctg 13613195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 13613676 - 13613558
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||  || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||    
T  13613676 tgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagtccctccgtccaaaaggtc 13613577  T
Q  101 cgttagtagtgatgatgtg 119  Q
    | ||||| |||||||||||    
T  13613576 cattagtggtgatgatgtg 13613558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 32439183 - 32439065
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  || |    
T  32439183 aaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagatctg 32439084  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||||||||||| |||||    
T  32439083 ttagtagtgatgacgtgtc 32439065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 20523557 - 20523658
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| ||||| |||| || ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||||||||    
T  20523557 cagccacgtgtacaaggactaaattgatgaaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctctatt 20523656  T
Q  221 ac 222  Q
    ||    
T  20523657 ac 20523658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 20523398 - 20523516
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  || |    
T  20523398 aaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttctg 20523497  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  20523498 ttagtggtgatgatgtgtc 20523516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3480716 - 3480627
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   | | ||| ||||||| |||||||||||    
T  3480716 tgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 3480627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 32454278 - 32454367
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  32454278 tgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 32454367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 32518556 - 32518467
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  32518556 tgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 32518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 10568445 - 10568549
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    ||||||| |||||||  ||||||||  | ||||||||||||||||||||||||| ||||||  |||||||||||| ||||  ||||||||| ||||||||    
T  10568445 ttcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatcaaaatagtccctccgtccaaaagctccgttagtggtgatgat 10568544  T
Q  117 gtgtc 121  Q
    |||||    
T  10568545 gtgtc 10568549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 7373036 - 7372933
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    |||||||||||||||| ||||||||  | |||||||||||||||||||| |||||||||||   ||||||||||| ||||  ||| ||||| ||||||||    
T  7373036 ttcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtccaaaagctccattagtggtgatgat 7372937  T
Q  117 gtgt 120  Q
    ||||    
T  7372936 gtgt 7372933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 9398713 - 9398811
Alignment:
Q  24 ctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtca 122  Q
    ||||||||| ||||||||| | ||||||||||||||||| |||||| |||||||   ||||||||||| ||||  ||||||||| ||||||||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgtgtca 9398811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 9398851 - 9398945
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    |||||| |||||||||||||||| ||||||||||  | ||||||||| ||||||| ||||||| |  |||||| |||||| ||||||||||||||    
T  9398851 cagccacgtgtacaaggactaaattgatggaaattataaaaattcgagatttaacttttcagtgtaatttttcttgtgttgccaattatacccct 9398945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 32439010 - 32438920
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||||||||||| |||||||||| || ||| ||||| | ||||| ||||| | |  |||||||||||||||||||||||||||||||    
T  32439010 gtgtacaaggactaaattgatggaaatggtaaaatttcgagacttaacttttcaatataatttttcctgtgtttccaattatacccctcta 32438920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 11355413 - 11355513
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| |  ||||||||||| ||||||||||||| | |||||    
T  11355413 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtg-ttccaattatacctcgctatt 11355511  T
Q  221 ac 222  Q
    ||    
T  11355512 ac 11355513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 7049828 - 7049907
Alignment:
Q  42 caaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 121  Q
    |||||| |||||||||||||||||||||||||||||   ||||||||||| ||||  |||||| || |||||||||||||    
T  7049828 caaattcgtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgtgtc 7049907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 332
Target Start/End: Complemental strand, 25171975 - 25171832
Alignment:
Q  188 tttttcctgtgtttccaattatacccctctatta-ccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttc 286  Q
    |||||||||| ||||||| | ||||||||||||| |||| |  || |||||||||| ||||| |||||| | ||||| | |||||| ||||||| |||||    
T  25171975 tttttcctgtttttccaaatttacccctctattacccatacctttccatcctcaca-tttcagtcagaa-cctcaaaaacgtccctgacctttctccttc 25171878  T
Q  287 ccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 332  Q
    ||||  ||||| ||||| ||||||| || |||||||||| ||||||    
T  25171877 ccgctaaaaccttcatcatcttcacctctccaaaatcattatcatc 25171832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 32516909 - 32517026
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||||||||||||| | ||||| | | |||| || ||||||||||| ||||||||||||   ||||||||||| ||||  ||||    
T  32516909 aaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtccatcaaaattgtccctccgtccaaaagctccg 32517008  T
Q  103 ttagtagtgatgatgtgt 120  Q
    ||||| ||||||| ||||    
T  32517009 ttagtggtgatgacgtgt 32517026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 3018519 - 3018450
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  3018519 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 3018450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 18645147 - 18645074
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||   | | ||| |||||||||||||||||||    
T  18645147 ttcgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgt 18645074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 6899531 - 6899635
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    |||||| || ||||||  |||||||| | ||||||||| |||||||||||| |||||||||   |||||| |||| ||||  |||||||||  |||||||    
T  6899531 ttcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatccatcaaaatggtcccttcgtccaaaagctccgttagtgttgatgat 6899630  T
Q  117 gtgtc 121  Q
    |||||    
T  6899631 gtgtc 6899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 7049955 - 7050046
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 219  Q
    |||||||||||||||  |||||||||| || ||||||  |  || ||| ||||||| || ||||| | ||||||||||||||||||||||||    
T  7049955 gtgtacaaggactaatttgatggaaatggtaaaaattgcagtttgaacttttcagtgtcattttttccgtgtttccaattatacccctctat 7050046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 17952129 - 17952030
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  17952129 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 17952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 11355254 - 11355372
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||| |||||||||  |||||||| | | | ||||||||||||||||||| ||| ||||   ||||||||||| ||||  ||||    
T  11355254 aaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggccaccaaaatggtccctccgtccaaaagctccg 11355353  T
Q  103 ttagtagtgatgatgtgtc 121  Q
     |||| ||||||| |||||    
T  11355354 gtagtggtgatgacgtgtc 11355372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 32517068 - 32517162
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    |||||| ||||| |||||||||| |||||||||| || |||||| || ||||||| |||||   |  |||||  |||||||||||||||||||||    
T  32517068 cagccacgtgtataaggactaaattgatggaaatggtaaaaatttgagatttaacttttcatagtaatttttgttgtgtttccaattatacccct 32517162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 2968185 - 2968245
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||    
T  2968185 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaa 2968245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 10568598 - 10568684
Alignment:
Q  129 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    ||||||||||||||  |||||||||| || ||||||  |  |||||| ||| ||| || ||||| | ||||||||||||||||||||    
T  10568598 tgtacaaggactaatttgatggaaatggtaaaaattgcaattttaactttttagtgtcattttttccgtgtttccaattatacccct 10568684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 13610739 - 13610808
Alignment:
Q  20 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||||||||| ||||||||||||||||||| | |||||   | | ||| |||||||||||||||||||    
T  13610739 gtccctgaattttgcgaaatatcaaattagtccat-aatttacaaaatgtcaatcaaatcagtccctccgt 13610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32437170 - 32437208
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaat 39  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  32437170 tgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 504 - 538
Target Start/End: Complemental strand, 33268275 - 33268241
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtga 538  Q
    ||||||||||||||||||||| |||||||||||||    
T  33268275 acttcatatcatgtttcgttgatgtttgtttgtga 33268241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 10569976 - 10569888
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||| || || ||||||| |||||||| | ||||||| | |||||||  ||||||   | | ||||||||||||||||||||||||    
T  10569976 aaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgtc 10569888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 362; Significance: 0; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 1 - 434
Target Start/End: Original strand, 37020538 - 37020971
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||  ||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  37020538 tgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtc 37020637  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  37020638 cgttaatagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 37020737  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  37020738 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcacacaagtccctaacctttcaccttcccgcctaaactgtc 37020837  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  37020838 accctcttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcggttttgaagttagattttgtggtttgtcaaggtatagcca 37020937  T
Q  401 ttcaactttgttttccattcactcttgttcgttt 434  Q
    || |||||||||||||||||||||||||||||||    
T  37020938 ttaaactttgttttccattcactcttgttcgttt 37020971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Complemental strand, 6786095 - 6785655
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6786095 tgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaatgtc 6785996  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
     ||||  ||||||||||||||||||| || |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  6785995 tgttaacagtgatgatgtgtcagccacgtatacaaggactaaactgatggaaatggtcaaaatttgatatttaacatttcagtctcatttttcctgtgtt 6785896  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6785895 ttcaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 6785796  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||    
T  6785795 accctcttcacttcaccaaaatcatcatcatcatcggcgatcatccttggaaaagattcagttttcaagtcagatttcgtggtttgtcaaggtatagaca 6785696  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  6785695 ttcaactttgttttccattcactcttgttcgtttgtccctg 6785655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Complemental strand, 24208156 - 24207725
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||        
T  24208156 tgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaaac-- 24208059  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
           | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  24208058 -------aatgatgatgtgtcagccacgtgtacaaggactaaactgatggaaatggtcaaaattcgatatttaacatttcagtctcatttttcctgtgtt 24207966  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24207965 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccataacctttcaccttcccgcctaaaccgtc 24207866  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24207865 accctcttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagaca 24207766  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  24207765 ttcaactttgttttccattcactcttgttcgtttgtccctg 24207725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 39664860 - 39664742
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || |||||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||    
T  39664860 aaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccg 39664761  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  39664760 ttagtggtgatgatgtgtc 39664742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 40560255 - 40560373
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    ||||||| || || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||  |||||||||||| ||||  || |    
T  40560255 aaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatagtccctccgtccaaaagttctg 40560354  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  40560355 ttagtggtgatgatgtgtc 40560373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 17696397 - 17696499
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    ||||||||||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||| ||| ||||||||||||||||||    
T  17696397 cagccatgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtcttttcaattatacccctctatt 17696496  T
Q  221 acc 223  Q
    |||    
T  17696497 acc 17696499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 2767132 - 2767226
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 222  Q
    ||||||| ||| |||| ||||||||||||| ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||||||||||    
T  2767132 gtgtacatggattaaattgatggaaatagtaaaaattcgagatttaacttttcagtataatttttcctgtgtttccaattatacccctctattac 2767226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 6797698 - 6797800
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| ||||| |||| || ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||| ||||    
T  6797698 cagccacgtgtacaaggactaaattgatgaaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctttatt 6797797  T
Q  221 acc 223  Q
    |||    
T  6797798 acc 6797800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 14389196 - 14389078
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||| || | ||||||||||   ||||||||||| ||||  | ||    
T  14389196 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatggtccctccgtccaaaagtttcg 14389097  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    |||||||||||||||||||    
T  14389096 ttagtagtgatgatgtgtc 14389078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 16763108 - 16763226
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||| || |    
T  16763108 aaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaatctctg 16763207  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| | ||||| |||||    
T  16763208 ttagtggcgatgacgtgtc 16763226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 121 - 223
Target Start/End: Original strand, 40560414 - 40560516
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| |||||||||| || ||||||| | ||||||| ||||||| |  |||||| ||||||||||||||||||||||||||    
T  40560414 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcaagatttaacttttcagtgtaatttttcttgtgtttccaattatacccctctatt 40560513  T
Q  221 acc 223  Q
    |||    
T  40560514 acc 40560516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 24205628 - 24205717
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  24205628 tgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 24205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 19908358 - 19908240
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || || ||||||||||||| ||||||||| | ||||||| |||||||||||||||||| |||||   ||||||||||| ||||  ||||    
T  19908358 aaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgtccaaaagctccg 19908259  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  19908258 ttagtggtgatgacgtgtc 19908240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14387379 - 14387468
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  14387379 tgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaataagtccctccgt 14387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37022244 - 37022155
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  37022244 tgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 37022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 2766981 - 2767084
Alignment:
Q  18 tcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatg 117  Q
    |||||| |||||||| ||||||||| | ||||||||||||||||||||||||| ||||||   ||||||| ||| ||||  ||||||||| |||||||||    
T  2766981 tcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatg 2767080  T
Q  118 tgtc 121  Q
    ||||    
T  2767081 tgtc 2767084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 42519151 - 42519056
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacattt-cagtctcttttttcctgtgtttccaattatacccctctattac 222  Q
    |||||||||||||||| |||||||||| || ||||||| | ||||||| ||| |||| |  |||||||||||||||||||||||||||||||||||    
T  42519151 gtgtacaaggactaaattgatggaaatggtaaaaattcaagatttaactttttcagtgtaatttttcctgtgtttccaattatacccctctattac 42519056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 44709857 - 44709739
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    ||||| |||| || |||| ||||||||||| ||||||| | | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  | ||    
T  44709857 aaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcg 44709758  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||| ||||    
T  44709757 ttagtggtgatgatatgtc 44709739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2577539 - 2577450
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  2577539 tgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 2577450  T

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Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 16763266 - 16763363
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| ||||| |||| || ||||||||| | ||||| ||||||| |  |||||| ||||||||||||||||||||||||    
T  16763266 cagccacgtgtacaaggactaaattgatgaaaatggtaaaaattcgagacttaacttttcagtataatttttcatgtgtttccaattatacccctcta 16763363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 16764666 - 16764581
Alignment:
Q  5 aaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||| ||||||||||||    
T  16764666 aaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgt 16764581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 17696238 - 17696357
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || ||| ||||||||||||   ||||||| | ||||||||||||||||||| ||||| ||||||   ||| ||||||| ||||  ||||    
T  17696238 aaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaatcaaaatggtcactccgtccaaaagctccg 17696337  T
Q  103 ttagtagtgatgatgtgtca 122  Q
    ||||| ||||||||||||||    
T  17696338 ttagtggtgatgatgtgtca 17696357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 42519301 - 42519199
Alignment:
Q  20 gtccctgaattttt-cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 118  Q
    |||| ||||||||| | ||||||| | ||||||||||||||||||||||||||||||||   |||||||| || ||||  ||||||||| ||||||||||    
T  42519301 gtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T
Q  119 gtc 121  Q
    |||    
T  42519201 gtc 42519199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 19908199 - 19908099
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  |||||||||||||| ||||||||||||||||||    
T  19908199 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcctgtgttt-caattatacccctctatt 19908101  T
Q  221 ac 222  Q
    ||    
T  19908100 ac 19908099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 16377292 - 16377192
Alignment:
Q  20 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 119  Q
    ||||||||||||| | ||||||| | ||||||| ||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| ||||||| |||    
T  16377292 gtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtg 16377193  T
Q  120 t 120  Q
    |    
T  16377192 t 16377192  T

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Target: chr2; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 132 - 215
Target Start/End: Original strand, 39455371 - 39455454
Alignment:
Q  132 acaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    |||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||  |||||||||||||||||||||    
T  39455371 acaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttattgtgtttccaattatacccct 39455454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 44709691 - 44709604
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    |||||||||||||||| |||||||||| || |||||| || ||||||| ||||||| |  |||||||||||||| ||| |||||||||    
T  44709691 gtgtacaaggactaaattgatggaaatggtaaaaatttgaaatttaacttttcagtataatttttcctgtgttttcaactatacccct 44709604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 6783396 - 6783453
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6783396 aaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40561937 - 40561848
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||| |||||||||  |||||| |||||||||||||||||||   | | ||| |||||||| ||||||||||    
T  40561937 tgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtcaatcaaatcggtccctccgt 40561848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 11023100 - 11023001
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| || ||||||||||| |||| ||||||||||    
T  11023100 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgttagt 11023001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 6797539 - 6797613
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    |||||| ||| || ||||| |||||||||| ||||||||| | ||||||||| ||||||||||||||| ||||||    
T  6797539 aaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaa 6797613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 230 - 332
Target Start/End: Original strand, 40097848 - 40097948
Alignment:
Q  230 tttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatc 329  Q
    ||||||||||||||||| | ||| || ||||||||| |||||| ||||||| |||||||||   |||| ||||| ||||||| || ||||||||||||||    
T  40097848 tttcatcctcacatttt-agtcataa-catcaaacatgtccctgacctttctccttcccgctagaaccttcatcatcttcacctctccaaaatcatcatc 40097945  T
Q  330 atc 332  Q
    |||    
T  40097946 atc 40097948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 39455221 - 39455317
Alignment:
Q  23 cctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 119  Q
    |||||||||| | ||||||| | ||||||| ||||||||||||||||||||||||   ||| ||||||  ||||  ||||||||| | |||||||||    
T  39455221 cctgaattttgcaaaatatctatttagtccatgaattttacagacgtccatcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgtg 39455317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 11315148 - 11315073
Alignment:
Q  257 catcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 332  Q
    ||||||||| |||||| ||||||| |||||| ||  ||||| ||||| ||||||| || |||||||||||||||||    
T  11315148 catcaaacacgtccctgacctttctccttcctgctaaaaccttcatcatcttcacctctccaaaatcatcatcatc 11315073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 14389037 - 14388975
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagt 183  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| |||||||    
T  14389037 cagccacgtgtacaaggactaacttgatggaaatggtaaaaattcgagatttaacttttcagt 14388975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 26584895 - 26584821
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||||| || ||||| ||||||||||||| ||||| ||||| | |||||||||||||||   ||||||||||    
T  26584895 ttcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtc 26584821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 37417310 - 37417379
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  37417310 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 37417379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 39664701 - 39664601
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| |||| || ||||  | |  |||||| |||| ||||||||||||||| |||||    
T  39664701 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttccatgtaatttttcatgtg-ttccaattataccccgctatt 39664603  T
Q  221 ac 222  Q
    ||    
T  39664602 ac 39664601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 4046352 - 4046403
Alignment:
Q  27 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 78  Q
    ||||||| ||||||||||||||||| || ||||| |||| ||||||||||||    
T  4046352 aattttttgaaatatcaaattagtctctaaatttaacagtcgtccatcaaat 4046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 332
Target Start/End: Complemental strand, 4416785 - 4416688
Alignment:
Q  233 catcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 332  Q
    |||||||||||||| | |||||| ||||||| | |||||| ||||||| |||| ||||  || || ||||| ||||||| || |||||||||||||||||    
T  4416785 catcctcacatttt-agtcagaa-catcaaaaacgtccctgacctttctcctttccgctaaatccttcatcatcttcacctctccaaaatcatcatcatc 4416688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 6785592 - 6785557
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    |||||||||||||||| |||||||||||||||||||    
T  6785592 acttcatatcatgtttggttgctgtttgtttgtgat 6785557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 16376768 - 16376855
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||  || |||||||||||||||| ||||||| | | |||||||||||||||   | |  || |||||||||||||||||||    
T  16376768 aaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatcaatcaaatcagtccctccgt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 19906714 - 19906801
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||  || |||||||||||||||| ||||||||| | ||||||||  |||||   | | ||| |||||||||||||||||||    
T  19906714 aaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaatcaaatcagtccctccgt 19906801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 29909735 - 29909664
Alignment:
Q  20 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    |||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  29909735 gtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtc 29909664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 37021041 - 37021076
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    ||||||||||||||||||||| ||||||||||||||    
T  37021041 acttcatatcatgtttcgttgttgtttgtttgtgat 37021076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 39663186 - 39663273
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||  || |||||||||||||||| | ||||| | | |||||||||||||||   | | ||| |||||||||||||||||||    
T  39663186 aaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 39663273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 11315396 - 11315339
Alignment:
Q  34 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    |||||||||||| |||| |||||||||  |||||||||||||||   |||||||||||    
T  11315396 cgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatggtccctccgtc 11315339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 15432378 - 15432434
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||    
T  15432378 tccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaa 15432434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 19581446 - 19581526
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 83  Q
    ||||||| || || || ||||||||||||| ||||||||| | |||||||  ||||||  || | ||||||||||||||||    
T  19581446 aaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtccatcaaatcagtc 19581526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 358; Significance: 0; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 1 - 434
Target Start/End: Complemental strand, 47013176 - 47012743
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  47013176 tgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgtccaaaatgtc 47013077  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    |||||  ||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  47013076 cgttaacagtgatgatgtgtcagccacgtgtacagggactaaactgatggaaattgtcaaaatttgatatttaacatttcagtctcttttttcctgtgtt 47012977  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  47012976 ttcaattatacccttctattaccattcactttcatcctcacattttcactcagaagcatcatacaagtccctaacctttcaccttcccgcctaaactgtc 47012877  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47012876 accctcttcacttcaccaaaatcatcatcatcatcggcgatcatccttggaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagcca 47012777  T
Q  401 ttcaactttgttttccattcactcttgttcgttt 434  Q
    || |||||||||||||||||||||||||||||||    
T  47012776 tttaactttgttttccattcactcttgttcgttt 47012743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Complemental strand, 9121762 - 9121335
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9121762 tgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtc 9121663  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    ||||| |||||||||||||||||| |  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9121662 cgttaatagtgatgatgtgtcagcaacatgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 9121563  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  9121562 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgta 9121463  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||             ||||||||||||||||||||||    
T  9121462 accctcttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcggtttt-------------gtggtttgtcaaggtatagcca 9121376  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    || ||||||||||||||||||||||||||||||| ||||||    
T  9121375 ttaaactttgttttccattcactcttgttcgtttgtccctg 9121335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 49 - 441
Target Start/End: Original strand, 1442599 - 1442990
Alignment:
Q  49 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgat 148  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  1442599 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtgtcagccacgtgtacaaggactaaactgat 1442698  T
Q  149 ggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactttcatcctcacattttca 248  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1442699 ggaaattgtcaaaattcgatatttaacatttcagtctcttttt-cctatgtttccaattatacccctctattaccattcactttcatcctcacattttca 1442797  T
Q  249 ctcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgctt 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |||    
T  1442798 ctcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtcaccctcttcacttcaccaaaatcatcatcatcaccggcgatcatcctt 1442897  T
Q  349 ggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1442898 gcaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagccattcaactttgttttccattcactcttgttcgtttgtccctg 1442990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 119 - 441
Target Start/End: Complemental strand, 33602579 - 33602258
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33602579 gtcagccatgtgtacaaggactaaattgatggaaatagtcaaaattcgagatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 33602480  T
Q  219 ttaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcacca 318  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  33602479 ttaccattgtctttcatcctcacattttcactcataagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcaccctattcacttcacca 33602380  T
Q  319 aaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaactttgttttccat 418  Q
    ||||||||||||||| || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  33602379 aaatcatcatcatcaccgacgatcatccttggaaaagattcagttttgaagtcagatttcgtggtttgtcaaggtaacgccattcaactttgttttccat 33602280  T
Q  419 tcactcttgttcgtttctccctg 441  Q
    ||||||||| |||||||||||||    
T  33602279 tcactcttg-tcgtttctccctg 33602258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 20 - 222
Target Start/End: Complemental strand, 51896227 - 51896017
Alignment:
Q  20 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 119  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||  |||||||||||| ||||  || |||||| |||||||||||    
T  51896227 gtccctgaattttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgtg 51896128  T
Q  120 tc--------agccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatac 211  Q
    ||         |||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  ||||||| || |||||||||||||    
T  51896127 tcctcttgcatgccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcccgtatttccaattatac 51896028  T
Q  212 ccctctattac 222  Q
    |||||||||||    
T  51896027 ccctctattac 51896017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 33602738 - 33602620
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| |||    
T  33602738 tgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgtcaaattagtccctccgtccaaaaggtc 33602639  T
Q  101 cgttagtagtgatgatgtg 119  Q
    |||||||| ||||||||||    
T  33602638 cgttagtaatgatgatgtg 33602620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 46583650 - 46583532
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||    
T  46583650 tgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatttgtccctccgtccaaaaggtc 46583551  T
Q  101 cgttagtagtgatgatgtg 119  Q
    ||||| | |||||||||||    
T  46583550 cgttaatggtgatgatgtg 46583532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 46583491 - 46583387
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||| |||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  46583491 gtcagccacgtgtacaaggactaaattgatgaaaatggtcaaaattcgatatttaacatttcagtctctcttttcatgtgttttcaattatacccctcta 46583392  T
Q  219 ttacc 223  Q
    |||||    
T  46583391 ttacc 46583387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 4856058 - 4855940
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||    
T  4856058 aaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccg 4855959  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||| | ||||||| |||||    
T  4855958 ttaatggtgatgacgtgtc 4855940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 34778230 - 34778112
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||| ||||  ||||    
T  34778230 aaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatggtccctccgtccaaaagctccg 34778131  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  34778130 ttagtggtgatgacgtgtc 34778112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 2869778 - 2869872
Alignment:
Q  129 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattacc 223  Q
    ||||||||||||||| ||||||||||||| |||||| || |||| || ||||||| |  ||||||||||||||||||||||||||||||||||||    
T  2869778 tgtacaaggactaaattgatggaaatagtaaaaatttgagatttgacttttcagtgtaatttttcctgtgtttccaattatacccctctattacc 2869872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 34778072 - 34777975
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  34778072 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctgtgtttccaattatacccctcta 34777975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 46582040 - 46582129
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  46582040 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 46582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 3 - 122
Target Start/End: Original strand, 2869611 - 2869730
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||||||||||||| ||||||||| | |||||| || ||||||||||||||||||||||   ||||||||||| ||||  || |    
T  2869611 aaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtccatcaaaatggtccctccgtccaaaagctctg 2869710  T
Q  103 ttagtagtgatgatgtgtca 122  Q
    ||||| ||||||||||||||    
T  2869711 ttagtggtgatgatgtgtca 2869730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 31238587 - 31238469
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || || ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   |||| || ||| ||||  ||||    
T  31238587 aaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccatctgtccaaaagctccg 31238488  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  31238487 ttagtggtgatgacgtgtc 31238469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9120069 - 9120158
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  9120069 tgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 9120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 15104487 - 15104591
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    ||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   |||| |||||| ||||  ||| ||||| ||||||||    
T  15104487 ttcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgat 15104586  T
Q  117 gtgtc 121  Q
    |||||    
T  15104587 gtgtc 15104591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 15104632 - 15104724
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 213  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| || ||||| ||||||||||||||||||||    
T  15104632 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtcattttttctgtgtttccaattataccc 15104724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 27087315 - 27087433
Alignment:
Q  3 aaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtcc 101  Q
    ||||||||| ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||| ||||||||||||   | || |||||| ||||  |||    
T  27087315 aaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggcccatccgtccaaaagctcc 27087413  T
Q  102 gttagtagtgatgatgtgtc 121  Q
    |||||| |||||||||||||    
T  27087414 gttagtggtgatgatgtgtc 27087433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34776599 - 34776658
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34776599 tgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 25278460 - 25278342
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||||||||||||| ||||||| | | ||||||| ||||||||||| ||||||||||||   ||||||||||| ||||  ||||    
T  25278460 aaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccg 25278361  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  25278360 ttagtggtgatgacgtgtc 25278342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1444240 - 1444151
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  1444240 tgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 1444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 8167972 - 8168061
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |   | | ||| |||||||||||||||||||    
T  8167972 tgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtcaatcaaatcagtccctccgt 8168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8169627 - 8169538
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | ||| ||||||||| |||||||||    
T  8169627 tgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaatccctccgt 8169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 25276772 - 25276861
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  25276772 tgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 25276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 26225479 - 26225390
Alignment:
Q  129 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    ||||||||||||||| |||||||||| || ||||||||| | ||||| ||||| | |  |||||||||||||||||||||||||||||||    
T  26225479 tgtacaaggactaaattgatggaaatggtaaaaattcgaaacttaacttttcaatataatttttcctgtgtttccaattatacccctcta 26225390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 31238428 - 31238328
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| |  ||||||||||| ||||||||||||||| |||||    
T  31238428 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtg-ttccaattataccccgctatt 31238330  T
Q  221 ac 222  Q
    ||    
T  31238329 ac 31238328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 37346021 - 37345932
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  37346021 tgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 37345932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 47011486 - 47011575
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||   | | ||| ||||| |||||||||||||    
T  47011486 tgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtcaatcaactcagtccctccgt 47011575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 3013403 - 3013303
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| |||||||||| || |||||| || ||||||| ||||||| |  |||||||||||||| |||||||| | |||||||    
T  3013403 cagccacgtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcagtgtaatttttcctgtgttttcaattataactctctatt 3013304  T
Q  221 a 221  Q
    |    
T  3013303 a 3013303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 6818770 - 6818658
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| ||  ||||||||| ||||  | ||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||    
T  6818770 aaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccg 6818671  T
Q  103 ttagtagtgatga 115  Q
    ||||| |||||||    
T  6818670 ttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26223617 - 26223676
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26223617 tgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 37344374 - 37344492
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||||||||||||| ||||||| | | ||||||  ||||||||||| ||||||||||||   ||||||||||| ||||  ||||    
T  37344374 aaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccg 37344473  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  37344474 ttagtggtgatgacgtgtc 37344492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 27087473 - 27087570
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| ||||||||||||| || |||||||||| || ||||||||| | ||||| ||||| | |  ||||||||||||||||||||||| |||||||    
T  27087473 cagccacgtgtacaaggactgaattgatggaaatggtaaaaattcgagacttaacttttcaatataatttttcctgtgtttccaattatatccctcta 27087570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27089338 - 27089249
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||   | | ||| ||||||||||||| |||||    
T  27089338 tgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtcaatcaaatcagtccttccgt 27089249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 50556175 - 50556078
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 114  Q
    |||||| ||||||||| ||||||||| | ||||||||| ||||||||||||||| ||||||   ||||||||||| ||||  ||||||||| ||||||    
T  50556175 ttcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtctatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 3013554 - 3013447
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc------catcaaatcagtccctccgtctaaaatgtccgttagtagt 110  Q
    ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||      |||||||  |||||||||||| ||||  ||||||||| ||    
T  3013554 ttcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtccatggacatcaaaatagtccctccgtccaaaagctccgttagtggt 3013455  T
Q  111 gatgatgt 118  Q
    ||||||||    
T  3013454 gatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 4854440 - 4854499
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    ||||||||||   ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  4854440 tgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 4855893 - 4855805
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||||||||||| |||||||||| || |||||| || | ||||| ||||||| |  |||||||  ||||||||||||||||||||||    
T  4855893 gtgtacaaggactaaattgatggaaatggtaaaaatttgagacttaacttttcagtataatttttcc--tgtttccaattatacccctcta 4855805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 25279045 - 25278975
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 73  Q
    ||||||| || || ||||| ||| |||||| ||||||||| | ||||||||||||||||||||||||||||    
T  25279045 aaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 6818611 - 6818511
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||  |||| ||||| || |||||| || ||||||| ||||||| |  ||||||||||| |||||||||||| || |||||    
T  6818611 cagccacgtgtacaaggactaatttgatagaaatggtaaaaatttgagatttaacttttcagtgtaatttttcctgtg-ttccaattatactccgctatt 6818513  T
Q  221 ac 222  Q
    ||    
T  6818512 ac 6818511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33599248 - 33599335
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 88  Q
    |||||||||||  || ||||||| |||||||| ||||||||||||||| || ||||||||   | | ||| |||||||||||||||||    
T  33599248 tgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcagtccctcc 33599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 121 - 215
Target Start/End: Original strand, 37344533 - 37344627
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    |||||| ||||| |||||||||| |||||||||| || ||||||||| ||||||| |||||   |  |||||  |||||||||||||| ||||||    
T  37344533 cagccacgtgtataaggactaaattgatggaaatggtaaaaattcgagatttaacttttcatagtaatttttgttgtgtttccaattacacccct 37344627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 42134532 - 42134602
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||||    
T  42134532 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtc 42134602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 107
Target Start/End: Original strand, 5783427 - 5783500
Alignment:
Q  34 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5783427 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5783500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 18184017 - 18183961
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  18184017 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 18183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 36895588 - 36895528
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  36895588 ttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 36895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 1443053 - 1443088
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    ||||||||||||||||||||||||||||| ||||||    
T  1443053 acttcatatcatgtttcgttgctgtttgtctgtgat 1443088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 9121273 - 9121238
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    ||||||||||||||||||||| ||||||||||||||    
T  9121273 acttcatatcatgtttcgttgttgtttgtttgtgat 9121238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 33602196 - 33602161
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    ||||||||||||||||||||| ||||||||||||||    
T  33602196 acttcatatcatgtttcgttgatgtttgtttgtgat 33602161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 47012673 - 47012638
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    ||||||||||||||||||||| ||||||||||||||    
T  47012673 acttcatatcatgtttcgttgttgtttgtttgtgat 47012638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 27940654 - 27940727
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||   ||||||||||    
T  27940654 ttcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 50556023 - 50555939
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 213  Q
    |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  |||||| |||| ||||||||||||||    
T  50556023 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcttgtg-ttccaattataccc 50555939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 52643693 - 52643648
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 62  Q
    |||||||||||||||| ||||||||  | |||||||||||||||||    
T  52643693 ttcgtccctgaattttgcgaaatatttatttagtccctgaatttta 52643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 345; Significance: 0; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Complemental strand, 27407011 - 27406571
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||| ||| |||||||||| |||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  27407011 tgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagacgtccatcaaatcagtctctccgtccaaaatgtc 27406912  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    |||||  ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||  | | |||||||||||||||| |||||||||||||    
T  27406911 cgttaacagtgatgatgtgtcagccacgtgtacaaggactaaactgatggaaatggtcaaaatttaaaaattaacatttcagtctcatttttcctgtgtt 27406812  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27406811 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccccaacctttcaccttcccgcctaaaccgtc 27406712  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  27406711 acccttttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagaca 27406612  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  27406611 ttcaactttgttttccattcactcttgttcgtttatccctg 27406571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 15305827 - 15306267
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  15305827 tgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaatatc 15305926  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    |||||  ||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| | | ||||||||| |||||| |||||| ||||||    
T  15305927 cgttaacagtgatgatgtgtcagccacgtatacaaggactaaactgatggaaatggtcaaaattcaaaacttaacattttagtctcatttttcttgtgtt 15306026  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15306027 tccaattataccactctattacgattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgccaaaaccgtc 15306126  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15306127 accctcttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagaca 15306226  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15306227 ttcaactttgttttccattcactcttgttcgtttgtccctg 15306267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 15486196 - 15486636
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  15486196 tgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaatatc 15486295  T
Q  101 cgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    |||||  ||||||||||||||||||| || |||||||||||||||||||||||| |||||||||| | | ||||||||| |||||| |||||| ||||||    
T  15486296 cgttaacagtgatgatgtgtcagccacgtatacaaggactaaactgatggaaatggtcaaaattcaaaacttaacattttagtctcatttttcttgtgtt 15486395  T
Q  201 tccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtc 300  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15486396 tccaattataccactctattacgattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgccaaaaccgtc 15486495  T
Q  301 atcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagcca 400  Q
    | ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15486496 accctcttcacttcaccaaaatcatcatcatcaccggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagaca 15486595  T
Q  401 ttcaactttgttttccattcactcttgttcgtttctccctg 441  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  15486596 ttcaactttgttttccattcactcttgttcgtttgtccctg 15486636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27691184 - 27691302
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||    
T  27691184 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtc 27691283  T
Q  101 cgttagtagtgatgatgtg 119  Q
    ||| | |||||||||||||    
T  27691284 cgtcaatagtgatgatgtg 27691302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 27691343 - 27691446
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27691343 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcagtatcttttttcctgtgtttccaattatacccctcta 27691442  T
Q  219 ttac 222  Q
    ||||    
T  27691443 ttac 27691446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 33708759 - 33708658
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||| ||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33708759 gtcaaccacgtgtacaaggactaaattgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 33708660  T
Q  219 tt 220  Q
    ||    
T  33708659 tt 33708658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 33708905 - 33708800
Alignment:
Q  14 aatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgat 113  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||||||| |||||||    
T  33708905 aatttcgtccctgaattttgcgaaatattaaattagtccctgaattttacaaacgtccatcaaatctgtccctccgtccaaaaggtccgttaatagtgat 33708806  T
Q  114 gatgtg 119  Q
    ||||||    
T  33708805 gatgtg 33708800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 8609899 - 8609781
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||    
T  8609899 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccg 8609800  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  8609799 ttagtggtgatgacgtgtc 8609781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 13108448 - 13108330
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||  | ||    
T  13108448 aaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcg 13108349  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  13108348 ttagtggtgatgacgtgtc 13108330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 13282510 - 13282628
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||| ||||||||||||   ||||||||||| ||||  ||||    
T  13282510 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctccgtccaaaagctccg 13282609  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  13282610 ttagtggtgatgatgtgtc 13282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 38547260 - 38547378
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||| || ||||  ||||    
T  38547260 aaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccg 38547359  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  38547360 ttagtggtgatgacgtgtc 38547378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 42941806 - 42941924
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    ||||||| || || ||||||||||||||||  |||||||  | ||||||||||||||||||||| ||||||||||  |||||||||||| ||||| ||||    
T  42941806 aaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccatcaaaatagtccctccgtccaaaatctccg 42941905  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| | |||||||||||    
T  42941906 ttagtggagatgatgtgtc 42941924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 42941973 - 42942067
Alignment:
Q  129 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattacc 223  Q
    ||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||| |||||||||||||||||||||||||||    
T  42941973 tgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctatgtttccaattatacccctctattacc 42942067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 601763 - 601674
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  601763 tgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 5036640 - 5036737
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||| ||||||    
T  5036640 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatactcctcta 5036737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 9673263 - 9673159
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    ||||||||||||||||  |||||||| | ||| ||||||||||||||||||||||||||||   ||||||||||||||||  | ||||||| ||||||||    
T  9673263 ttcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgatgat 9673164  T
Q  117 gtgtc 121  Q
    |||||    
T  9673163 gtgtc 9673159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 41825742 - 41825638
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||| ||||||| ||||  || |||||||||||||||    
T  41825742 ttcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcactccgtccaaaagctctgttagtagtgatgat 41825643  T
Q  117 gtgtc 121  Q
    |||||    
T  41825642 gtgtc 41825638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 22272382 - 22272485
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    |||||||||||||||| || |||||| | ||||||||||||||||||| ||||||||||||  ||||||||| || ||||  ||||||||| ||||||||    
T  22272382 ttcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaacgtccatcaaaatagtccctccatccaaaagctccgttagtggtgatgat 22272481  T
Q  117 gtgt 120  Q
    ||||    
T  22272482 gtgt 22272485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 41042537 - 41042438
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| | |||||||||||||| |||||||||| || ||||||| | ||||||| ||||||| |  |||||||||||||||||||||||||||||||||    
T  41042537 cagccacgggtacaaggactaaattgatggaaattgtaaaaattcaagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctctatt 41042438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 26242426 - 26242308
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    ||||||| || || ||||||||| |||||| ||||||||| | |||||| |||||||||||||||||||||||||   ||||||||||| ||||  ||||    
T  26242426 aaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccg 26242327  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| | |||||||||||    
T  26242326 ttagtggcgatgatgtgtc 26242308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 41042696 - 41042578
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||| ||| || || |||||||||||||  |||||||| | |||||||||||||||||||| |||||||||||   ||||||||||| ||||  ||||    
T  41042696 aaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtccaaaagctccg 41042597  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  41042596 ttagtggtgatgatgtgtc 41042578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 13108290 - 13108193
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||| ||||||||||||||||    
T  13108290 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctgtgttttcaattatacccctcta 13108193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33761099 - 33761188
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  33761099 tgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 33761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 33762772 - 33762683
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| ||||||||| |||||||||    
T  33762772 tgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaatccctccgt 33762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 13486197 - 13486093
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    |||||| ||| ||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||| ||| ||||  ||| ||||||||||||||    
T  13486197 ttcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctctgtccaaaagctccattagtagtgatgat 13486098  T
Q  117 gtgtc 121  Q
    |||||    
T  13486097 gtgtc 13486093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15308320 - 15308261
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15308320 tgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15488689 - 15488630
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15488689 tgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29237181 - 29237240
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29237181 tgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29239246 - 29239187
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  29239246 tgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 13284054 - 13283965
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||   | | ||| |||||||||||||||||||    
T  13284054 tgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgt 13283965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27692896 - 27692807
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | ||| || ||||||||||||||||    
T  27692896 tgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaattaaatcagtccctccgt 27692807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33707236 - 33707325
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||| ||||||    
T  33707236 tgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtcactccgt 33707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 35509244 - 35509333
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| ||||||||||||| |||||    
T  35509244 tgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgt 35509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38548890 - 38548801
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | |  || |||||||||||||||||||    
T  38548890 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttcaatcaaatcagtccctccgt 38548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 40339633 - 40339536
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| ||||||||||||||||  ||||||||| || ||||||||| ||||||| ||||||| |  |||| ||||||||| ||||||||||||||||    
T  40339633 cagccacgtgtacaaggactaaatggatggaaatggtaaaaattcgagatttaacttttcagtgtaattttccctgtgttttcaattatacccctcta 40339536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13106834 - 13106893
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  13106834 tgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 13486045 - 13485953
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 222  Q
    |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||| | |  |||||||  ||||||||||||||||||||||||||    
T  13486045 gtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcaatgtaatttttcc--tgtttccaattatacccctctattac 13485953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 7745224 - 7745106
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    ||||||| || || |||||| ||||||||| ||||||||  | |||||||||| ||||||||||| |||||||||   |||||||| || ||||  ||||    
T  7745224 aaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatccatcaaaatggtccctccatccaaaagctccg 7745125  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  7745124 ttagtggtgatgatgtgtc 7745106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 8608267 - 8608357
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaattttt-cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||||||||||||| |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  8608267 tgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgt 8608357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 8609741 - 8609647
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||| | |  |||||||| |||||||||||||||||||    
T  8609741 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcattataatttttcctttgtttccaattatacccct 8609647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 9673118 - 9673012
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctc----ttttttc--ctgtgtttccaattatacccc 214  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| ||    |||||||  |||||||||||||||||||||    
T  9673118 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtcatttttttttcttctgtgtttccaattatacccc 9673019  T
Q  215 tctatta 221  Q
    |||||||    
T  9673018 tctatta 9673012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 35510878 - 35510789
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  |||||||||| ||||||||  ||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  35510878 tgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 35510789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 27404240 - 27404299
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||    
T  27404240 tgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 42943483 - 42943396
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||   | | ||| |||||||||||||||||||    
T  42943483 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 42943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 38547418 - 38547513
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| ||||||||||  | ||||||||||| ||||| ||||||| |  |||||||   |||||||||||||||||||||    
T  38547418 cagccacgtgtacaaggactaaattgatggaaatgataaaaattcgatacttaacttttcagtataatttttcc--ggtttccaattatacccctcta 38547513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 357
Target Start/End: Complemental strand, 11721633 - 11721465
Alignment:
Q  188 tttttcctgtgtttccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcc 287  Q
    ||||| |||| ||| ||||| |||||||||||||||  |  ||| |||  ||||| |||||||| ||  ||||||| | |||||| | ||||| ||||||    
T  11721633 ttttttctgttttttcaattttacccctctattacccataccttccataatcaca-tttcactcggacacatcaaatacgtccctgatctttctccttcc 11721535  T
Q  288 cgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagat 357  Q
    |||  ||||| ||| | ||||||| || |||||||||||||||||  |||||||||   |||||||||||    
T  11721534 cgctaaaaccttcaccttcttcacctctccaaaatcatcatcatctccggcgatcaacattggaaaagat 11721465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 5036491 - 5036551
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||||||||||||||  |||||||| | ||||||| ||||||||||||||||| ||||||    
T  5036491 ttcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtctatcaaa 5036551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 26238758 - 26238845
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||| || || |||||||||||||||| ||||||||| | |||||||  ||||||   | | |||||||||||||||||||||||    
T  26238758 aaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtccatcaaatcagtccctccgt 26238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 40339760 - 40339677
Alignment:
Q  35 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 118  Q
    |||||||| | ||||||| ||||||||||||| ||||||||||   |||||| | || ||||  ||||||||||||||||||||    
T  40339760 gaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 11788367 - 11788441
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||||  ||||| ||||||||||||||| ||||  |||||| |||||||||||||||||   ||||||||||    
T  11788367 ttcgtcccctaatttatcgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtc 11788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 31821464 - 31821538
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||||| |||| | ||||||||||| |||||||| ||||||  |||||||||||||||   |||||||||||    
T  31821464 ttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaaggtccctccgtc 31821538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 40020713 - 40020623
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  40020713 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 40020623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 37526084 - 37526027
Alignment:
Q  34 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||   |||||||||||    
T  37526084 cgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtc 37526027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 332
Target Start/End: Original strand, 9184700 - 9184788
Alignment:
Q  244 tttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 332  Q
    |||||||||||  ||||||| | |||| | | ||||| |||||||||  ||||| ||||| ||||||| || |||||||||||||||||    
T  9184700 tttcactcagacacatcaaatacgtccatgatctttctccttcccgctaaaaccttcatcatcttcacctctccaaaatcatcatcatc 9184788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 28433804 - 28433704
Alignment:
Q  7 atcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttag 106  Q
    |||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||| | |  ||||||||||| |||| || ||||||    
T  28433804 atcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttcgtccctccgtccaaaaggttcgttag 28433705  T
Q  107 t 107  Q
    |    
T  28433704 t 28433704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 33750472 - 33750388
Alignment:
Q  7 atcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    |||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  ||||| | |||||||   |||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtc 33750388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 15306330 - 15306365
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    |||||||||||||||| |||||||||||||||||||    
T  15306330 acttcatatcatgtttggttgctgtttgtttgtgat 15306365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Original strand, 15486699 - 15486734
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    |||||||||||||||| |||||||||||||||||||    
T  15486699 acttcatatcatgtttggttgctgtttgtttgtgat 15486734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 22273948 - 22273861
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || || ||| ||||||||| | ||||||| | |||||||||||||||   | | ||| |||||||||||||||||||    
T  22273948 aaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 22273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 27406508 - 27406473
Alignment:
Q  504 acttcatatcatgtttcgttgctgtttgtttgtgat 539  Q
    |||||||||||||||| |||||||||||||||||||    
T  27406508 acttcatatcatgtttggttgctgtttgtttgtgat 27406473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 41823922 - 41824009
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||| || |||||||||| |||||||| ||||||||| | |||||||  ||||||   | | || ||||||||||||||||||||    
T  41823922 aaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgttcatcaaatcagtccctccgt 41824009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 42897861 - 42897778
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| || ||||||||| |||| |  |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  42897861 tcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 42897778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 31201230 - 31201148
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||| || ||||||| | |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 9184446 - 9184503
Alignment:
Q  34 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    |||||||||||||||||||||||||||  |||||||| ||| ||   |||||||||||    
T  9184446 cgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtc 9184503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 34681123 - 34681074
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtcc 52  Q
    |||||||||| || |||||||||||||||| ||||||||| | |||||||    
T  34681123 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 41825590 - 41825498
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctc-ttttttcctgtgtttccaattatacccctctat 219  Q
    |||||||||||||||  |||| ||||| || ||||||  |  |||||| ||||||| || ||||||  |||||||| ||||||||||||||||    
T  41825590 gtgtacaaggactaatttgatagaaatggtaaaaattgcaattttaacttttcagtgtcatttttttatgtgtttctaattatacccctctat 41825498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 3e-89; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 121 - 427
Target Start/End: Complemental strand, 35404378 - 35404077
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||| ||||||| |||||||||| || ||||||||||||||||| ||| ||| |  ||||||||||||||||||||||||||||         
T  35404378 cagccacgtgtacaatgactaaattgatggaaatggtaaaaattcgatatttaactttttagtgtaatttttcctgtgtttccaattatacccct----- 35404284  T
Q  221 accattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaa 320  Q
    || |||  |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||  |||| |||||||||||| |||||    
T  35404283 actattgtctttcatcctcacattttcacttagaagcatcaaataagtccctaaccttttaccttcccgcctaaattgtcaccctcttcacttctccaaa 35404184  T
Q  321 atcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaactttgttttccattc 420  Q
    ||||||||||||  |||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||  | |||||||||| |||||||||||    
T  35404183 atcatcatcatcgccggcgatcaaccttggaaaagatacggttttgaagtcagattacgtggtttgtcaaggtaacgacattcaacttcgttttccattc 35404084  T
Q  421 actcttg 427  Q
    |||||||    
T  35404083 actcttg 35404077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 43519454 - 43519572
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||    
T  43519454 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgtccaaaaggtc 43519553  T
Q  101 cgttagtagtgatgatgtg 119  Q
    | ||| |||||||||||||    
T  43519554 cattaatagtgatgatgtg 43519572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 43519613 - 43519714
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  43519613 gtcagccatgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttctgtctcttttttcctgtgttttcaattatacccctcta 43519712  T
Q  219 tt 220  Q
    ||    
T  43519713 tt 43519714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 11255873 - 11255772
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||||||| ||||||||||||||||||    
T  11255873 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcagtgtaatttttcctgtgttttcaattatacccctctatt 11255774  T
Q  221 ac 222  Q
    ||    
T  11255773 ac 11255772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 49523156 - 49523272
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||| |||||||   ||||||||||| ||||  ||||    
T  49523156 aaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtccaaaaaatccg 49523255  T
Q  103 ttagtagtgatgatgtg 119  Q
    ||||| |||||||||||    
T  49523256 ttagtggtgatgatgtg 49523272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 41761838 - 41761720
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || ||||||||  |||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  | ||    
T  41761838 aaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcg 41761739  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  41761738 ttagtggtgatgatgtgtc 41761720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4173799 - 4173710
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | ||||| ||||| |||||||||||||    
T  4173799 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgtcaatcaactcagtccctccgt 4173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 43507197 - 43507286
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  43507197 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 43507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43508712 - 43508623
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  43508712 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 43508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5437841 - 5437930
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | ||| ||||||| |||||||||||    
T  5437841 tgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 5437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 33266069 - 33265980
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  33266069 tgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 33265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 51012116 - 51012213
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||| ||||||||||||||||||||||    
T  51012116 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctatgtttccaattatacccctcta 51012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 343
Target Start/End: Original strand, 25993826 - 25993912
Alignment:
Q  257 catcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatcggcgatca 343  Q
    ||||||||| |||||||||||||| |||||||||| ||||| ||| | ||||||| || ||||||||||||||||| ||||||||||    
T  25993826 catcaaacacgtccctaacctttctccttcccgccaaaaccttcaccatcttcacctctccaaaatcatcatcatcttcggcgatca 25993912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 41761672 - 41761578
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 222  Q
    ||||||||||||||||  ||||||||| || ||||||| | ||||||| ||||| | |  |||||||||||||||||||||||||||||||||||    
T  41761672 gtgtacaaggactaaatcgatggaaatggtaaaaattcaagatttaacttttcaatgtaatttttcctgtgtttccaattatacccctctattac 41761578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 41781730 - 41781828
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 219  Q
    |||||||||||||||| |||||| |||||||||| || ||| ||||| ||||||| ||||| | || ||||| || |||||||||||||||||||||||    
T  41781730 cagccatgtgtacaagaactaaattgatggaaatggtaaaacttcgagatttaacttttcaatgtcattttttctatgtttccaattatacccctctat 41781828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 833253 - 833342
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | ||| ||||||| |||||||||||    
T  833253 tgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5439706 - 5439617
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | ||| ||||||| |||||||||||    
T  5439706 tgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 5439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 51011980 - 51012076
Alignment:
Q  25 tgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 121  Q
    |||||||| ||||||||| | |||||| |||||||||||||||||||||||||   ||||||||||| ||||  || |||||||||||||| |||||    
T  51011980 tgaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtagtgatgacgtgtc 51012076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 41781571 - 41781689
Alignment:
Q  3 aaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtcc 101  Q
    ||||||||| ||||||| ||||||||||||| | ||||||  | |||||||||||||||||||||| |||||||||   ||||||||||| ||||  |||    
T  41781571 aaaaatcggtcaaattt-gtccctgaattttgcaaaatatttatttagtccctgaattttacagacatccatcaaaatggtccctccgtccaaaagctcc 41781669  T
Q  102 gttagtagtgatgatgtgtc 121  Q
    ||||||  ||||||||||||    
T  41781670 gttagtgatgatgatgtgtc 41781689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 319303 - 319392
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | ||| |||||| ||||||||||||    
T  319303 tgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatcaaaccagtccctccgt 319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 835101 - 835012
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| | ||||| ||||||||||| |||||||||||||| ||||||||||||||   | ||||| ||||||| |||||||||||    
T  835101 tgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtcaatcaaattagtccctccgt 835012  T

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Target: chr4; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33264412 - 33264501
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||||||||||||||||| | ||||||||||||||| |||||||||   | | ||| |||||||||||||||||||    
T  33264412 tgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtcaatcaaatcagtccctccgt 33264501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 42980684 - 42980785
Alignment:
Q  20 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 119  Q
    |||| |||||||| |||||| || | ||||||||| ||||||||||||||||||||||   ||||||||||| ||||  || |||||| |||||||||||    
T  42980684 gtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtg 42980783  T
Q  120 tc 121  Q
    ||    
T  42980784 tc 42980785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 51013945 - 51013856
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||||||||||||||||| | ||||||||||| |||||||||||||   | | ||| |||||||||||||||||||    
T  51013945 tgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 51013856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 49523322 - 49523409
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    |||||||| ||||||| |||||||||| || ||||||||| ||||||| ||||||| |  ||| || |||||||||||||||||||||    
T  49523322 gtgtacaaagactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttctcttgtgtttccaattatacccct 49523409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 35404537 - 35404419
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || ||||||| | |||||| ||||||||  | ||| ||||||||||||||||||||||| ||||   |||| |||||| ||||  ||||    
T  35404537 aaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtccaacaaaatggtccatccgtccaaaagctccg 35404438  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  35404437 ttagtggtgatgacgtgtc 35404419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 42980833 - 42980918
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 213  Q
    |||||||| ||||||| |||||||||| || ||||||||| ||||||| ||||| | |  ||||| ||||||||||||||||||||    
T  42980833 gtgtacaaagactaaattgatggaaattgtaaaaattcgagatttaacttttcattgtaattttttctgtgtttccaattataccc 42980918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 4169729 - 4169805
Alignment:
Q  14 aatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||   | | ||| |||||| ||||||||||||    
T  4169729 aatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgt 4169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 48646825 - 48646721
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    ||||||| |||||||  ||||||||| | |||||||||||||||||||||| | |||||||   |||| |||||| ||||  | ||||||| ||||||||    
T  48646825 ttcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccgtccaaaagcttcgttagtggtgatgat 48646726  T
Q  117 gtgtc 121  Q
    |||||    
T  48646725 gtgtc 48646721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 39083676 - 39083775
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39083676 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39083775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 48646673 - 48646582
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 219  Q
    |||||||||||||||  |||||||||| || ||||||  |  |||||| ||||||| || ||||| | ||||||||||||||||||||||||    
T  48646673 gtgtacaaggactaatttgatggaaatggtaaaaattgtagttttaacttttcagtgtcattttttccgtgtttccaattatacccctctat 48646582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 52868094 - 52868005
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||||||||||| |||||||||| || |||||| || ||||||| ||||||| |   |||||  |||||||||||||||||||||||    
T  52868094 gtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcagtgt-aattttctcgtgtttccaattatacccctcta 52868005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 320959 - 320870
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||| ||| |||||||| ||||||||||||||||||| |||| ||   | | ||| ||||| |||||||||||||    
T  320959 tgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtcaatcaactcagtccctccgt 320870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 2693186 - 2693087
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcg-atatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 219  Q
    |||||| |||||||||||||||  |||||||||| || |||| | | |  |||||| ||||||| || |||||  |||||||||||||||||||||||||    
T  2693186 cagccacgtgtacaaggactaatttgatggaaatggtaaaaaattgcagttttaacttttcagtgtcattttttatgtgtttccaattatacccctctat 2693087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 5484577 - 5484676
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5484577 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5484676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 11601868 - 11601955
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 215  Q
    ||||| |||||||||  |||||||||| || ||||||  |  |||||| ||||||| || ||||| ||||||||||||||||||||||    
T  11601868 gtgtataaggactaatttgatggaaatggtaaaaattgcagttttaacttttcagtgtcattttttctgtgtttccaattatacccct 11601955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 35401781 - 35401868
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || ||||||||||||||||  |||||||| | ||||||| |||||||   | | ||| |||||||||||||||||||    
T  35401781 aaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgt 35401868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 39345596 - 39345683
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || |||||||||||||||| ||||||| | | |||||||||||||||   | | ||| |||||||||||| ||||||    
T  39345596 aaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatcagtctctccgt 39345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 39921531 - 39921630
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39921531 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39921630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 43779954 - 43779855
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  43779954 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 43779855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 11601744 - 11601786
Alignment:
Q  45 attagtccctgaattttacagacgtccatcaaatcagtccctc 87  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  11601744 attagtccctgaattttacagacgtccatcaaaatagtccctc 11601786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 105
Target Start/End: Original strand, 39189419 - 39189516
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 105  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  39189419 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 44558580 - 44558511
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  44558580 tcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 44558511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 44794838 - 44794765
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  44794838 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 48813837 - 48813937
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgt 120  Q
    |||||||||||| | ||||||  | ||||| ||||||||||| ||||||||||||||   |||||| |||| ||||  || ||| || ||||||||||||    
T  48813837 tccctgaattttgcaaaatatatatttagttcctgaattttatagacgtccatcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgtgt 48813936  T
Q  121 c 121  Q
    |    
T  48813937 c 48813937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 27624869 - 27624912
Alignment:
Q  34 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  27624869 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 27624912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 32652136 - 32652235
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||| || ||||||||  |||||  |||||||||||| |||||| |||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  32652136 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 32652235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 43521144 - 43521109
Alignment:
Q  25 tgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||| |||||||||||||||||||||||||||    
T  43521144 tgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 44994374 - 44994275
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 107  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||| || |||| ||||||||||    
T  44994374 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgttagt 44994275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 35996109 - 35996183
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||||| |||| | | ||||||||| ||| |||||||||||  |||||||||||||||   |||||||||||    
T  35996109 ttcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtc 35996183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 47941857 - 47941930
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||| || |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  47941857 ttcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 2827468 - 2827524
Alignment:
Q  35 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 2827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 13451058 - 13450998
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 77  Q
    ||||||||  |||||  |||||||||||| |||||| |||||||  |||||||||||||||    
T  13451058 ttcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaa 13450998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 1e-67; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 268 - 437
Target Start/End: Complemental strand, 19987426 - 19987254
Alignment:
Q  268 tccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatc---ggcgatcatgcttggaaaagattcggttt 364  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||| | |||    
T  19987426 tccctaacctttcaccttcccgcctaaaccgtcaccctcttcacttcaccaaaatcatcatcatcatcaccggcgatcattcttggaaaagatttgattt 19987327  T
Q  365 tgaagtcagatttcgtggtttgtcaaggtatagccattcaactttgttttccattcactcttgttcgtttctc 437  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  19987326 tgaagtcagatttcgtggtttgtcaaggtaacaccattcaactttgttttccattcactcttgttcgtttctc 19987254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3152332 - 3152214
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||    
T  3152332 tgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtc 3152233  T
Q  101 cgttagtagtgatgatgtg 119  Q
    ||||| |||||||||||||    
T  3152232 cgttaatagtgatgatgtg 3152214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 44794396 - 44794499
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44794396 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaatttgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 44794495  T
Q  219 ttac 222  Q
    ||||    
T  44794496 ttac 44794499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 19987695 - 19987590
Alignment:
Q  14 aatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgat 113  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  19987695 aatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgat 19987596  T
Q  114 gatgtg 119  Q
    ||||||    
T  19987595 gatgtg 19987590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 2660401 - 2660504
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    ||||||||  ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2660401 gtcagccacttgtacaaggactaaattgatggaaattgtcaaaatttgatatttaacatttcagtctcttttttcctgtgttttcaattatacccctcta 2660500  T
Q  219 ttac 222  Q
    ||||    
T  2660501 ttac 2660504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 44794240 - 44794355
Alignment:
Q  4 aaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgt 103  Q
    ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||| |||| ||||||    
T  44794240 aaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtccatcaaattcgtccctccgtccaaaaggtccgt 44794339  T
Q  104 tagtagtgatgatgtg 119  Q
    || |||||||||||||    
T  44794340 taatagtgatgatgtg 44794355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2660242 - 2660360
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||| |||    
T  2660242 tgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtc 2660341  T
Q  101 cgttagtagtgatgatgtg 119  Q
     |||| ||  |||||||||    
T  2660342 tgttaataacgatgatgtg 2660360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 119 - 240
Target Start/End: Complemental strand, 19987552 - 19987430
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctctt-ttttcctgtgtttccaattatacccctct 217  Q
    ||||| || |||||||||||||||| |||||||||| |||||||||||| ||||||| |||||||||||| |||| || |||||| ||||||||||||||    
T  19987552 gtcagtcacgtgtacaaggactaaattgatggaaatggtcaaaattcgagatttaacgtttcagtctcttttttttctatgtttctaattatacccctct 19987453  T
Q  218 attaccattcactttcatcctca 240  Q
    |||||||||  ||||||||||||    
T  19987452 attaccattgtctttcatcctca 19987430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 53190871 - 53190753
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||    
T  53190871 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccg 53190772  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  53190771 ttagtggtgatgacgtgtc 53190753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 23293123 - 23293022
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||| ||||||||||||||||||||||    
T  23293123 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtatttccaattatacccctctatt 23293024  T
Q  221 ac 222  Q
    ||    
T  23293023 ac 23293022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 44276149 - 44276048
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||||||| ||||||||||||||||||    
T  44276149 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgttttcaattatacccctctatt 44276050  T
Q  221 ac 222  Q
    ||    
T  44276049 ac 44276048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 21348755 - 21348873
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  || |    
T  21348755 aaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctctg 21348854  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||| |||||||    
T  21348855 ttagtggtgataatgtgtc 21348873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 27899193 - 27899075
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||||| |||   ||||||||||| ||||  ||||    
T  27899193 aaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccataaaaatggtccctccgtccaaaagctccg 27899094  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  27899093 ttagtggtgatgacgtgtc 27899075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 121 - 222
Target Start/End: Original strand, 17515501 - 17515602
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    |||||| |||||||||||||||| |||||||||| || |||||| || ||||||| ||||||| |  ||||||||||||||||||||||| |||||||||    
T  17515501 cagccacgtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcagtgtaatttttcctgtgtttccaattatatccctctatt 17515600  T
Q  221 ac 222  Q
    ||    
T  17515601 ac 17515602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 35905666 - 35905569
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  35905666 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagacttaacttttcagtataatttttcctgtgtttccaattatacccctcta 35905569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 46308837 - 46308926
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  46308837 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 46308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 23293283 - 23293164
Alignment:
Q  2 gaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtcc 101  Q
    |||||||| || || |||| || |||||||| ||||||||| | ||||||| ||||||||||| ||||||||||||  |||||||||||| ||||  |||    
T  23293283 gaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtccatcaaaatagtccctccgtccaaaagctcc 23293184  T
Q  102 gttagtagtgatgatgtgtc 121  Q
    |||||| |||||||||||||    
T  23293183 gttagtggtgatgatgtgtc 23293164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 2226264 - 2226146
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||    |||||||||| ||||  || |    
T  2226264 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatgttccctccgtccaaaaactctg 2226165  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| ||||||| |||||    
T  2226164 ttagtggtgatgacgtgtc 2226146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 35905824 - 35905706
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||   ||||||||||| ||||  ||||    
T  35905824 aaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtccaaaagctccg 35905725  T
Q  103 ttagtagtgatgatgtgtc 121  Q
     |||| ||||||| |||||    
T  35905724 gtagtggtgatgacgtgtc 35905706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 41977782 - 41977900
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||| || | |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||   ||||||||||| ||||  | ||    
T  41977782 aaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtccgtcaaaatggtccctccgtccaaaagcttcg 41977881  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||| | ||||||| |||||    
T  41977882 ttaatggtgatgacgtgtc 41977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 51684642 - 51684760
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    ||||||| || || ||| |||||||||||| | ||||||| | ||||||| ||||||||||||||||||||||||   ||||||||||| ||||  ||||    
T  51684642 aaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccg 51684741  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  51684742 ttagtggtgatgatgtgtc 51684760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 38191925 - 38192014
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  38191925 tgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 38192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38193569 - 38193480
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| ||||||||||||| |||||    
T  38193569 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgt 38193480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 53094332 - 53094243
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  53094332 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatgagtccctccgt 53094243  T

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Target: chr3; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 53187772 - 53187861
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  53187772 tgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 53187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 54898627 - 54898724
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||| ||||||||||||||||||||||||    
T  54898627 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcatgtgtttccaattatacccctcta 54898724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 54900133 - 54900044
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||   | | ||| |||||||||||||||||||    
T  54900133 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 54900044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 30600028 - 30599912
Alignment:
Q  5 aaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtt 104  Q
    |||||||| || || ||||||||||||| ||||||||| | ||||||||||||||||| ||||||| ||||||   ||||||||||| ||||  || |||    
T  30600028 aaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtcgatcaaaatggtccctccgtccaaaagctctgtt 30599929  T
Q  105 agtagtgatgatgtgtc 121  Q
    ||| |||||||||||||    
T  30599928 agtggtgatgatgtgtc 30599912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3150282 - 3150369
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 88  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||    
T  3150282 tgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctcc 3150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 41979411 - 41979352
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41979411 tgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 17515342 - 17515460
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||| ||| || ||| || ||||||||| ||||||||| | ||||||||||||||||||| ||||||||||||   ||||||| ||| |||||  |||    
T  17515342 aaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaatcaccg 17515441  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  17515442 ttagtggtgatgatgtgtc 17515460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 7884819 - 7884730
Alignment:
Q  129 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||| |||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  7884819 tgtataaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctgtgtttccaattatacccctcta 7884730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 46310495 - 46310406
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||| ||||||||||||    
T  46310495 tgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgt 46310406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 46609179 - 46609264
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccct 86  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||   | | ||| |||||||||||||||    
T  46609179 tgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccct 46609264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 53092653 - 53092742
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | | ||| |||||||||||||||||||    
T  53092653 tgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtcaatcaaatcagtccctccgt 53092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 53190713 - 53190616
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| |||||||||||||||| |||||||||| || |||||| || | ||||| ||||||| |  ||||||||||||||||| |||||||||||||    
T  53190713 cagccacgtgtacaaggactaaattgatggaaatggtaaaaatttgagacttaacttttcagtataatttttcctgtgtttccagttatacccctcta 53190616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 2226105 - 2226009
Alignment:
Q  122 agccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    ||||| |||||||||||||||| |||||||||||||  |||||||| | ||||| ||| ||| |   ||||||||||||||||||||||||||||||    
T  2226105 agccacgtgtacaaggactaaattgatggaaatagtacaaattcgagacttaacttttaagtataaattttcctgtgtttccaattatacccctcta 2226009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 3152173 - 3152113
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacattt 179  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  3152173 gtcagccacgtgtacaaggactaaattgatggaaatagtcaaaattcgatatttaaaattt 3152113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 46611349 - 46611273
Alignment:
Q  14 aatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  46611349 aatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgt 46611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 54898469 - 54898573
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||   ||| ||||||| ||||  ||||    
T  54898469 aaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtctctccgtccaaaagctccg 54898568  T
Q  103 ttagt 107  Q
    |||||    
T  54898569 ttagt 54898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 121
Target Start/End: Original strand, 43765169 - 43765287
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccg 102  Q
    |||||||||  || ||||| || ||||||| ||||||||| | |||||  |||||||||||||||||||||||||   |||||||| || ||||  ||||    
T  43765169 aaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccg 43765268  T
Q  103 ttagtagtgatgatgtgtc 121  Q
    ||||| |||||||||||||    
T  43765269 ttagtggtgatgatgtgtc 43765287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 43765328 - 43765426
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 219  Q
    |||||| |||||||| ||||||| |||||||||| || |||| |||| ||||||| ||||| | |  ||||| ||||||||||||||||||||||||||    
T  43765328 cagccacgtgtacaatgactaaattgatggaaatggtaaaaaatcgagatttaacttttcaatgtaattttttctgtgtttccaattatacccctctat 43765426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 121 - 222
Target Start/End: Complemental strand, 27899034 - 27898934
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 220  Q
    ||||||||||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  ||||||||||| ||||||||||||||| |||||    
T  27899034 cagccatgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcctgtg-ttccaattataccccgctatt 27898936  T
Q  221 ac 222  Q
    ||    
T  27898935 ac 27898934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 28626441 - 28626530
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||   | | ||| ||||||| |||||||||||    
T  28626441 tgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 28626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 2377075 - 2377179
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    |||||||||||||||| | ||| ||  | |||||| |||||||||||||||||||||||||   || |||||||||||||  ||||||||| |||||||     
T  2377075 ttcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccatcaaaatggttcctccgtctaaaagctccgttagtggtgatgac 2377174  T
Q  117 gtgtc 121  Q
    |||||    
T  2377175 gtgtc 2377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 42279553 - 42279657
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    |||||| | ||||||| | ||||||| | ||||||||||||||||||||||||| ||||||   ||||||||||| ||||  || |||||| ||||||||    
T  42279553 ttcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctccgtccaaaagctctgttagtggtgatgat 42279652  T
Q  117 gtgtc 121  Q
    |||||    
T  42279653 gtgtc 42279657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 2661967 - 2661880
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 88  Q
    |||||||||| | |||||||||| |||||||| ||||||||||||||||||| |||||||   | | ||| |||||||||||||||||    
T  2661967 tgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctcc 2661880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 41977947 - 41978035
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||  ||||||||||||||||||||||    
T  41977947 gtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcc--tgtttccaattatacccctcta 41978035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 44795949 - 44795890
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  44795949 tgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 46112676 - 46112775
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    ||||| || |||||||| ||||||| |||||||||| || ||||||| | ||||||| ||||||| || |||||  ||||||||||| ||||||||||||    
T  46112676 gtcagtcacgtgtacaaagactaaattgatggaaatggtaaaaattcaagatttaacttttcagtgtcattttttatgtgtttccaactatacccctcta 46112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 219
Target Start/End: Original strand, 600900 - 600998
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 219  Q
    |||||| |||||||||||||||| | |||||||| || |||||| || ||||||| ||||||  || |||||  | |||||||||||||||||||||||    
T  600900 cagccacgtgtacaaggactaaattaatggaaatggtaaaaatttgagatttaacttttcagagtcattttttatatgtttccaattatacccctctat 600998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7883358 - 7883447
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||| |||||||||||| ||||||  |||||||||||||||| |||||||||   | |  || |||||||||||||||||||    
T  7883358 tgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttcaatcaaatcagtccctccgt 7883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 23291602 - 23291689
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || |||||||||||||||| ||||||||| | |||||| ||||||||   | | ||| |||||||||||||||||||    
T  23291602 aaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaatcaaatcagtccctccgt 23291689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 23774189 - 23774268
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctc 87  Q
    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||  ||||||||    
T  23774189 tcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaagtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 35903855 - 35903914
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 60  Q
    ||||||||| || |||||| |||||||||||| | |||||||||||||||||||||||||    
T  35903855 tgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 219
Target Start/End: Original strand, 51684808 - 51684899
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 219  Q
    |||||||||||||||  |||||||||| || ||||||  |  |||||| ||||||| || ||||| |||||||| |||||||||||||||||    
T  51684808 gtgtacaaggactaatttgatggaaatggtaaaaattgcaggtttaacttttcagtgtcattttttctgtgttttcaattatacccctctat 51684899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  49 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 115  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 183
Target Start/End: Complemental strand, 30599871 - 30599809
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagt 183  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| |||||||    
T  30599871 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagt 30599809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 46197766 - 46197867
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 116  Q
    |||||| ||||||||| | ||||||| | ||||| |||||||||||||||||||||| |||   |||||| |||| ||||  |||||||||  |||||||    
T  46197766 ttcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgat 46197865  T
Q  117 gt 118  Q
    ||    
T  46197866 gt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 25535317 - 25535253
Alignment:
Q  27 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||| |||||   ||||||||||    
T  25535317 aatttttcgaaatattaagttagtccctgaatttaacagacgtccaccaaattcatccctccgtc 25535253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 48830896 - 48830800
Alignment:
Q  25 tgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 121  Q
    |||||||  ||||||||| | ||||||  |||||||||| |||||||||||||   ||||||||||| ||||  || |||||| |||||||||||||    
T  48830896 tgaatttaacgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 48830800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 3151745 - 3151698
Alignment:
Q  176 atttcagtctcttttttcctgtgtttccaattatacccctctattacc 223  Q
    |||| |||||||||| || |||||||||||||||||||||||||||||    
T  3151745 atttaagtctcttttatcttgtgtttccaattatacccctctattacc 3151698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 121
Target Start/End: Complemental strand, 44276265 - 44276190
Alignment:
Q  46 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 121  Q
    ||||||| ||||||||||||||| ||||||||   ||||||||||| ||||  || |||||| |||||||||||||    
T  44276265 ttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 44276190  T

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Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 46112519 - 46112606
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||| || |||||   |||||||| | ||||||| | ||||||| ||||||||||||||||||||||||   ||||||||||    
T  46112519 aaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtccatcaaaatggtccctccgt 46112606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 48830752 - 48830661
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 219  Q
    |||||||||||||||  |||||||||| || ||||||  |  |||||| ||||| | || ||||| | ||||||||||||||||||||||||    
T  48830752 gtgtacaaggactaatttgatggaaatggtaaaaattgtagttttaacttttcattatcattttttccgtgtttccaattatacccctctat 48830661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 23877044 - 23876982
Alignment:
Q  29 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||||||   ||||||||||    
T  23877044 ttttttgaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtc 23876982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 46197918 - 46198012
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 222  Q
    |||||||||||||||| |||||||||| || |||||||||  |||||| ||||| | |  ||||| || |||||||||||  |||||| ||||||    
T  46197918 gtgtacaaggactaaattgatggaaatggtaaaaattcgagctttaacttttcaatgtaattttttctatgtttccaattgaacccctatattac 46198012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 48633923 - 48633997
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||||    
T  48633923 ttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtc 48633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 611279 - 611192
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    ||||||| || || |||||||||||||||||||||||| | | |||| ||||||||||   | | ||| ||||||| |||||||||||    
T  611279 aaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgtcaatcaaattagtccctccgt 611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 2379040 - 2378953
Alignment:
Q  3 aaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||  ||||||||||||||||||| | ||||| | | ||||||| |||||||   | | ||| |||||||||||||||||||    
T  2379040 aaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtcaatcaaatcagtccctccgt 2378953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 23888859 - 23888776
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| || ||||||||| |||| | ||||||||||  |||||||||||||||  || ||||||||||||   |||||||||||    
T  23888859 tcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaaggtccctccgtc 23888776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 40508998 - 40508915
Alignment:
Q  8 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| || ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||   |||||||||||    
T  40508998 tcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaatgtccctccgtc 40508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 45898423 - 45898352
Alignment:
Q  20 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||||||||| | ||||||||||| ||||||| |||||||  |||||||| ||||||   |||||||||||    
T  45898423 gtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaaggtccctccgtc 45898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 33113254 - 33113184
Alignment:
Q  21 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 91  Q
    ||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  33113254 tccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 21348916 - 21348993
Alignment:
Q  123 gccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 200  Q
    |||| |||||||| ||||||| ||||| |||| || ||||||||| ||||||  ||||||| |  |||||||||||||    
T  21348916 gccacgtgtacaaagactaaattgatgaaaatggtaaaaattcgagatttaatttttcagtgtaatttttcctgtgtt 21348993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 332
Target Start/End: Original strand, 54092945 - 54093088
Alignment:
Q  188 tttttcctgtgtttccaattatacccctctattacc-attcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttc 286  Q
    |||||| ||| |||| || | ||||||||||||||| || || || ||||||||||||| || ||| || ||| ||| | |||| | ||||||| |||||    
T  54092945 tttttcatgtttttctaaatttacccctctattacccatacatttccatcctcacattt-cagtcacaa-cataaaaaacgtccatgacctttctccttc 54093042  T
Q  287 ccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 332  Q
    ||||  ||||| ||||| | ||||| || |||||||||||||||||    
T  54093043 ccgctaaaaccttcatcattttcacctctccaaaatcatcatcatc 54093088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 87; Significance: 2e-41; HSPs: 5)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3324 - 3442
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||    
T  3324 tgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtc 3423  T
Q  101 cgttagtagtgatgatgtg 119  Q
    ||||| |||||||||||||    
T  3424 cgttaatagtgatgatgtg 3442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 4496 - 4614
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtc 100  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||    
T  4496 tgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtc 4595  T
Q  101 cgttagtagtgatgatgtg 119  Q
    ||||| |||||||||||||    
T  4596 cgttaatagtgatgatgtg 4614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 3483 - 3587
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3483 gtcagccacgtgtacaaagactaaattgatggaaatggtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttcaaattatacccctcta 3582  T
Q  219 ttacc 223  Q
    |||||    
T  3583 ttacc 3587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 4655 - 4759
Alignment:
Q  119 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4655 gtcagccacgtgtacaaagactaaattgatggaaatggtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttcaaattatacccctcta 4754  T
Q  219 ttacc 223  Q
    |||||    
T  4755 ttacc 4759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14402 - 14313
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  14402 tgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 121 - 218
Target Start/End: Original strand, 8451 - 8548
Alignment:
Q  121 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||| ||||||||| |||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  8451 cagccacgtgtacaagtactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctcta 8548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 1012 - 1101
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | ||| ||||||| |||||||||||    
T  1012 tgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 54317 - 54228
Alignment:
Q  1 tgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 90  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  54317 tgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 54228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 1309 - 1407
Alignment:
Q  17 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 115  Q
    ||||||| ||||||||  |||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  1309 ttcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 1460 - 1550
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 218  Q
    |||||||||||||||| |||||||||| || ||||||| | | ||||| ||||| | | ||||||||||||||||||||||||||||||||    
T  1460 gtgtacaaggactaaattgatggaaatggtaaaaattcaagacttaacttttcaatatattttttcctgtgtttccaattatacccctcta 1550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 37402 - 37454
Alignment:
Q  128 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttc 180  Q
    |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||    
T  37402 gtgtacaaggactaatttgatggaaattgtaaaaattcgaaatttaacttttc 37454  T

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