View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0109_low_6 (Length: 252)

Name: NF0109_low_6
Description: NF0109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0109_low_6
NF0109_low_6
[»] chr7 (55 HSPs)
chr7 (85-232)||(56330-56477)
chr7 (85-232)||(20478042-20478189)
chr7 (85-232)||(27666042-27666189)
chr7 (79-229)||(29996494-29996644)
chr7 (85-204)||(35401969-35402088)
chr7 (85-204)||(35403589-35403708)
chr7 (85-229)||(39859209-39859353)
chr7 (85-204)||(20479689-20479808)
chr7 (85-232)||(37115503-37115650)
chr7 (84-229)||(6602334-6602479)
chr7 (84-204)||(77984-78104)
chr7 (88-204)||(27664433-27664549)
chr7 (78-232)||(24228386-24228540)
chr7 (85-204)||(13169653-13169772)
chr7 (85-232)||(38474120-38474267)
chr7 (88-221)||(34776903-34777036)
chr7 (84-232)||(30940402-30940550)
chr7 (85-204)||(47384294-47384413)
chr7 (88-205)||(37796185-37796302)
chr7 (84-229)||(45359335-45359480)
chr7 (88-204)||(39857648-39857764)
chr7 (85-232)||(47386186-47386333)
chr7 (80-204)||(37113936-37114060)
chr7 (86-145)||(29994907-29994966)
chr7 (86-204)||(24226582-24226700)
chr7 (107-229)||(13168142-13168267)
chr7 (84-202)||(23904582-23904700)
chr7 (84-200)||(38549546-38549662)
chr7 (85-204)||(22155817-22155936)
chr7 (85-204)||(22211732-22211851)
chr7 (88-202)||(48227913-48228027)
chr7 (88-174)||(6605397-6605483)
chr7 (85-204)||(46437107-46437226)
chr7 (84-146)||(23906295-23906357)
chr7 (95-205)||(33038801-33038911)
chr7 (131-232)||(35693347-35693450)
chr7 (134-205)||(366747-366818)
chr7 (141-192)||(7401949-7402000)
chr7 (89-200)||(35691431-35691542)
chr7 (122-221)||(45463707-45463806)
chr7 (95-205)||(46996706-46996816)
chr7 (94-198)||(13039618-13039722)
chr7 (85-204)||(34774998-34775117)
chr7 (85-204)||(45361246-45361365)
chr7 (95-205)||(27955380-27955490)
chr7 (95-187)||(38613503-38613595)
chr7 (95-183)||(47341712-47341800)
chr7 (85-116)||(35693434-35693465)
chr7 (135-205)||(2167529-2167599)
chr7 (95-205)||(23953815-23953925)
chr7 (148-221)||(4322560-4322633)
chr7 (132-205)||(11682828-11682901)
chr7 (88-137)||(13018036-13018085)
chr7 (131-204)||(35344295-35344368)
chr7 (95-191)||(46812600-46812696)
[»] chr8 (58 HSPs)
chr8 (81-232)||(27691150-27691301)
chr8 (82-232)||(27406894-27407044)
chr8 (78-232)||(33708801-33708954)
chr8 (85-232)||(13282478-13282625)
chr8 (103-232)||(15305815-15305944)
chr8 (103-232)||(15486184-15486313)
chr8 (85-229)||(8609787-8609931)
chr8 (85-229)||(13108336-13108480)
chr8 (85-204)||(601674-601793)
chr8 (80-204)||(33762683-33762807)
chr8 (85-229)||(38547228-38547372)
chr8 (85-174)||(29237151-29237240)
chr8 (85-174)||(29239187-29239276)
chr8 (77-204)||(8608229-8608357)
chr8 (88-232)||(42941777-42941921)
chr8 (85-204)||(27692807-27692926)
chr8 (85-204)||(33761069-33761188)
chr8 (85-204)||(38548801-38548920)
chr8 (86-204)||(33707207-33707325)
chr8 (85-204)||(35509214-35509333)
chr8 (85-204)||(35510789-35510908)
chr8 (85-174)||(13106804-13106893)
chr8 (85-174)||(15308261-15308350)
chr8 (85-174)||(15488630-15488719)
chr8 (88-204)||(13283965-13284081)
chr8 (88-232)||(41825641-41825785)
chr8 (85-232)||(41042581-41042728)
chr8 (85-204)||(42943396-42943515)
chr8 (83-232)||(22272332-22272483)
chr8 (88-232)||(26242311-26242455)
chr8 (85-232)||(13486096-13486243)
chr8 (85-232)||(7745109-7745256)
chr8 (85-204)||(26238726-26238845)
chr8 (88-174)||(27404213-27404299)
chr8 (23-84)||(18645752-18645813)
chr8 (84-166)||(34681074-34681156)
chr8 (86-191)||(5036446-5036551)
chr8 (85-204)||(22273861-22273980)
chr8 (85-204)||(41823890-41824009)
chr8 (98-232)||(9673162-9673296)
chr8 (84-144)||(600759-600819)
chr8 (85-204)||(5038032-5038150)
chr8 (85-153)||(13484545-13484613)
chr8 (85-204)||(43262107-43262226)
chr8 (95-221)||(28433704-28433830)
chr8 (95-205)||(31821428-31821538)
chr8 (149-232)||(40339677-40339760)
chr8 (85-204)||(41040720-41040839)
chr8 (131-205)||(11788367-11788441)
chr8 (131-221)||(40020623-40020713)
chr8 (95-205)||(42897778-42897888)
chr8 (148-205)||(37526027-37526084)
chr8 (95-191)||(462388-462484)
chr8 (95-191)||(32822371-32822467)
chr8 (95-191)||(33160166-33160262)
chr8 (121-205)||(33750388-33750472)
chr8 (122-204)||(31201148-31201230)
chr8 (148-205)||(9184446-9184503)
[»] chr5 (39 HSPs)
chr5 (85-232)||(29621758-29621905)
chr5 (81-232)||(42473584-42473735)
chr5 (88-232)||(40780553-40780697)
chr5 (85-232)||(2854304-2854450)
chr5 (85-232)||(24541188-24541336)
chr5 (85-229)||(17574318-17574462)
chr5 (84-232)||(36057590-36057738)
chr5 (83-229)||(7267841-7267987)
chr5 (85-204)||(40782181-40782300)
chr5 (85-204)||(2852886-2853005)
chr5 (79-174)||(7269446-7269541)
chr5 (85-204)||(21842962-21843081)
chr5 (85-204)||(29620138-29620257)
chr5 (85-232)||(34327635-34327782)
chr5 (85-229)||(2179787-2179931)
chr5 (85-204)||(12738706-12738825)
chr5 (85-204)||(12801529-12801648)
chr5 (82-204)||(8541241-8541363)
chr5 (87-204)||(17577905-17578022)
chr5 (84-229)||(30468260-30468405)
chr5 (85-221)||(8539675-8539811)
chr5 (88-232)||(18624985-18625129)
chr5 (85-174)||(30463900-30463989)
chr5 (85-174)||(42471548-42471637)
chr5 (85-204)||(28813735-28813856)
chr5 (88-204)||(28822060-28822176)
chr5 (85-204)||(34328797-34328916)
chr5 (95-205)||(18728606-18728716)
chr5 (95-176)||(43492131-43492212)
chr5 (95-191)||(38596878-38596974)
chr5 (141-192)||(27075876-27075927)
chr5 (131-205)||(32087560-32087634)
chr5 (95-205)||(35395343-35395453)
chr5 (95-205)||(43318064-43318174)
chr5 (85-174)||(32134231-32134320)
chr5 (88-172)||(41493847-41493931)
chr5 (95-205)||(33256410-33256520)
chr5 (131-192)||(19997164-19997225)
chr5 (85-125)||(28819348-28819388)
[»] chr1 (50 HSPs)
chr1 (85-232)||(9121645-9121792)
chr1 (85-232)||(47013059-47013206)
chr1 (88-232)||(33602621-33602765)
chr1 (85-232)||(46583533-46583680)
chr1 (85-229)||(4855946-4856090)
chr1 (85-229)||(34778118-34778262)
chr1 (85-204)||(46582010-46582129)
chr1 (85-174)||(34776569-34776658)
chr1 (83-204)||(37345932-37346053)
chr1 (85-232)||(2869579-2869726)
chr1 (85-204)||(8167942-8168061)
chr1 (85-204)||(8169538-8169657)
chr1 (85-204)||(25276742-25276861)
chr1 (85-174)||(26223587-26223676)
chr1 (85-229)||(6818658-6818802)
chr1 (85-229)||(25278348-25278492)
chr1 (85-229)||(31238475-31238619)
chr1 (85-204)||(9120039-9120158)
chr1 (85-204)||(27089249-27089368)
chr1 (82-229)||(37344339-37344486)
chr1 (85-232)||(27087283-27087430)
chr1 (85-204)||(47011456-47011575)
chr1 (78-187)||(25278975-25279084)
chr1 (85-232)||(51896129-51896276)
chr1 (85-204)||(1444151-1444270)
chr1 (85-232)||(3013447-3013600)
chr1 (84-174)||(4854409-4854499)
chr1 (85-228)||(50556078-50556221)
chr1 (85-204)||(31236819-31236938)
chr1 (96-202)||(33599229-33599335)
chr1 (163-232)||(1442599-1442668)
chr1 (85-204)||(52641888-52642007)
chr1 (85-204)||(2871046-2871165)
chr1 (131-232)||(15104487-15104588)
chr1 (88-176)||(52643648-52643736)
chr1 (85-204)||(37088106-37088225)
chr1 (86-200)||(50554164-50554278)
chr1 (85-146)||(33599187-33599248)
chr1 (86-146)||(1442551-1442611)
chr1 (88-204)||(3011858-3011974)
chr1 (86-146)||(6816866-6816926)
chr1 (85-165)||(25278854-25278934)
chr1 (88-204)||(51894570-51894686)
chr1 (95-205)||(42134492-42134602)
chr1 (85-174)||(23577636-23577725)
chr1 (85-145)||(45044949-45045009)
chr1 (148-221)||(5783427-5783500)
chr1 (135-191)||(18183961-18184017)
chr1 (131-191)||(36895528-36895588)
chr1 (131-204)||(27940654-27940727)
[»] chr4 (50 HSPs)
chr4 (84-232)||(43519423-43519571)
chr4 (84-204)||(4173710-4173830)
chr4 (85-204)||(43507167-43507286)
chr4 (85-204)||(43508623-43508742)
chr4 (86-232)||(49523125-49523271)
chr4 (88-232)||(41761723-41761867)
chr4 (84-204)||(33265980-33266100)
chr4 (85-204)||(319273-319392)
chr4 (85-204)||(5437811-5437930)
chr4 (85-204)||(33264382-33264501)
chr4 (85-204)||(51013856-51013975)
chr4 (85-204)||(833223-833342)
chr4 (85-204)||(5439617-5439736)
chr4 (85-229)||(51011926-51012070)
chr4 (85-204)||(320870-320989)
chr4 (85-204)||(835012-835131)
chr4 (85-204)||(4169686-4169805)
chr4 (76-232)||(41781530-41781686)
chr4 (85-204)||(35401749-35401868)
chr4 (85-229)||(35404425-35404569)
chr4 (84-232)||(48813786-48813934)
chr4 (85-204)||(49524703-49524822)
chr4 (95-204)||(39345574-39345683)
chr4 (85-204)||(20493827-20493946)
chr4 (90-174)||(43521109-43521193)
chr4 (85-204)||(48645255-48645374)
chr4 (104-232)||(48646724-48646852)
chr4 (88-201)||(11601674-11601786)
chr4 (134-232)||(42980684-42980782)
chr4 (79-204)||(11254113-11254238)
chr4 (122-221)||(39083676-39083775)
chr4 (95-191)||(44558511-44558607)
chr4 (122-221)||(5484577-5484676)
chr4 (122-221)||(39921531-39921630)
chr4 (122-221)||(43779855-43779954)
chr4 (79-197)||(2691368-2691485)
chr4 (122-219)||(39189419-39189516)
chr4 (131-204)||(44794765-44794838)
chr4 (86-196)||(20819986-20820096)
chr4 (148-191)||(27624869-27624912)
chr4 (122-221)||(32652136-32652235)
chr4 (85-204)||(42982422-42982541)
chr4 (122-221)||(44994275-44994374)
chr4 (104-191)||(52868167-52868254)
chr4 (131-205)||(35996109-35996183)
chr4 (95-204)||(10372711-10372820)
chr4 (131-204)||(47941857-47941930)
chr4 (88-176)||(2693285-2693373)
chr4 (149-205)||(2827468-2827524)
chr4 (131-191)||(13450998-13451058)
[»] scaffold0058 (3 HSPs)
scaffold0058 (85-232)||(3294-3441)
scaffold0058 (85-232)||(4466-4613)
scaffold0058 (85-204)||(14313-14432)
[»] chr6 (34 HSPs)
chr6 (84-232)||(32455868-32456016)
chr6 (103-230)||(3456766-3456893)
chr6 (85-232)||(13613559-13613706)
chr6 (85-204)||(32518467-32518586)
chr6 (85-229)||(32439071-32439215)
chr6 (85-204)||(3480627-3480746)
chr6 (85-204)||(32454248-32454367)
chr6 (86-232)||(20523367-20523513)
chr6 (85-229)||(32516877-32517021)
chr6 (89-232)||(10568403-10568546)
chr6 (85-204)||(18645074-18645192)
chr6 (88-232)||(7372935-7373079)
chr6 (86-229)||(11355223-11355366)
chr6 (85-205)||(10569888-10570008)
chr6 (85-204)||(13610690-13610808)
chr6 (85-232)||(6899485-6899632)
chr6 (85-174)||(9400035-9400124)
chr6 (79-204)||(11357164-11357289)
chr6 (85-153)||(32437140-32437208)
chr6 (73-204)||(6902868-6902996)
chr6 (138-232)||(9398713-9398807)
chr6 (85-154)||(7371175-7371244)
chr6 (76-204)||(20525304-20525432)
chr6 (85-146)||(8605353-8605414)
chr6 (156-232)||(7049828-7049904)
chr6 (100-204)||(14338480-14338584)
chr6 (122-191)||(3018450-3018519)
chr6 (88-204)||(21068628-21068744)
chr6 (122-221)||(17952030-17952129)
chr6 (89-146)||(7049790-7049847)
chr6 (131-191)||(2968185-2968245)
chr6 (88-123)||(21091109-21091144)
chr6 (95-210)||(35175862-35175977)
chr6 (79-156)||(7051263-7051340)
[»] chr3 (64 HSPs)
chr3 (79-232)||(3152215-3152368)
chr3 (85-232)||(44794208-44794354)
chr3 (91-232)||(2660218-2660359)
chr3 (85-229)||(53190759-53190903)
chr3 (85-204)||(46308807-46308926)
chr3 (85-229)||(27899081-27899225)
chr3 (85-204)||(38193480-38193599)
chr3 (85-204)||(53094243-53094362)
chr3 (85-204)||(54900044-54900163)
chr3 (84-174)||(41979352-41979442)
chr3 (85-202)||(3150252-3150369)
chr3 (85-210)||(41977750-41977875)
chr3 (85-229)||(2226152-2226296)
chr3 (128-232)||(19987591-19987695)
chr3 (85-232)||(21348723-21348870)
chr3 (85-204)||(38191895-38192014)
chr3 (85-204)||(53187742-53187861)
chr3 (85-221)||(54898437-54898573)
chr3 (85-204)||(46310406-46310525)
chr3 (85-204)||(46611273-46611392)
chr3 (85-232)||(51684610-51684757)
chr3 (85-174)||(44795890-44795979)
chr3 (84-232)||(30599915-30600063)
chr3 (85-232)||(17515310-17515457)
chr3 (85-232)||(23293167-23293314)
chr3 (85-200)||(46609149-46609264)
chr3 (85-204)||(53092623-53092742)
chr3 (87-232)||(43765139-43765284)
chr3 (90-202)||(2661880-2661992)
chr3 (85-204)||(28626411-28626530)
chr3 (79-174)||(35903819-35903914)
chr3 (85-204)||(7883328-7883447)
chr3 (85-204)||(23291570-23291689)
chr3 (98-229)||(35905712-35905843)
chr3 (85-204)||(46112487-46112606)
chr3 (88-232)||(42279510-42279654)
chr3 (85-204)||(611192-611311)
chr3 (86-204)||(2378953-2379071)
chr3 (88-229)||(2377032-2377173)
chr3 (80-204)||(44267976-44268100)
chr3 (95-201)||(23774162-23774268)
chr3 (85-204)||(30598337-30598456)
chr3 (85-146)||(7884927-7884988)
chr3 (88-204)||(42282443-42282559)
chr3 (85-201)||(51686367-51686483)
chr3 (84-201)||(48829355-48829472)
chr3 (163-229)||(7884873-7884939)
chr3 (95-205)||(23888776-23888886)
chr3 (95-205)||(40508915-40509025)
chr3 (95-205)||(48633887-48633997)
chr3 (88-202)||(54412519-54412633)
chr3 (131-232)||(46197766-46197867)
chr3 (95-191)||(2977347-2977443)
chr3 (141-205)||(25535253-25535317)
chr3 (85-204)||(21350575-21350694)
chr3 (143-205)||(23876982-23877044)
chr3 (95-205)||(45898352-45898462)
chr3 (95-204)||(17516943-17517052)
chr3 (139-232)||(48830803-48830896)
chr3 (85-165)||(600725-600805)
chr3 (160-232)||(44276193-44276265)
chr3 (85-204)||(46114075-46114195)
chr3 (135-205)||(33113184-33113254)
chr3 (95-175)||(41944586-41944666)
[»] chr2 (39 HSPs)
chr2 (85-232)||(6785978-6786125)
chr2 (85-232)||(37020508-37020655)
chr2 (85-210)||(24208061-24208186)
chr2 (79-232)||(39664745-39664898)
chr2 (85-221)||(16763076-16763212)
chr2 (80-204)||(24205593-24205717)
chr2 (85-204)||(14387349-14387468)
chr2 (85-232)||(40560223-40560370)
chr2 (85-232)||(14389081-14389228)
chr2 (85-204)||(16764581-16764700)
chr2 (85-230)||(44709744-44709889)
chr2 (85-204)||(37022155-37022274)
chr2 (79-204)||(2577450-2577575)
chr2 (85-229)||(19908246-19908391)
chr2 (80-232)||(2766929-2767081)
chr2 (88-232)||(17696209-17696353)
chr2 (85-204)||(40561848-40561967)
chr2 (85-174)||(6783364-6783453)
chr2 (89-232)||(42519202-42519346)
chr2 (84-204)||(39663153-39663273)
chr2 (85-204)||(16376736-16376855)
chr2 (85-197)||(19581414-19581526)
chr2 (88-204)||(19906685-19906801)
chr2 (84-191)||(6797506-6797613)
chr2 (85-232)||(39455169-39455316)
chr2 (84-154)||(34400313-34400383)
chr2 (134-229)||(16377197-16377292)
chr2 (79-204)||(39456750-39456875)
chr2 (122-221)||(11023001-11023100)
chr2 (85-126)||(42517558-42517599)
chr2 (99-191)||(37417287-37417379)
chr2 (88-146)||(6799436-6799494)
chr2 (95-205)||(11315339-11315449)
chr2 (131-205)||(26584821-26584895)
chr2 (141-192)||(4046352-4046403)
chr2 (134-205)||(29909664-29909735)
chr2 (95-201)||(361455-361561)
chr2 (88-205)||(37645490-37645607)
chr2 (135-191)||(15432378-15432434)
[»] scaffold1712 (1 HSPs)
scaffold1712 (85-204)||(982-1101)
[»] scaffold0081 (1 HSPs)
scaffold0081 (85-204)||(54228-54347)
[»] scaffold1454 (1 HSPs)
scaffold1454 (88-229)||(1266-1407)
[»] scaffold0345 (1 HSPs)
scaffold0345 (79-204)||(1525-1650)
[»] scaffold0564 (1 HSPs)
scaffold0564 (87-176)||(8264-8353)
[»] scaffold0002 (1 HSPs)
scaffold0002 (92-156)||(436272-436336)


Alignment Details
Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 56330 - 56477
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||| ||| |||||||||| |||||||| |||||||||||||||||    
T  56430 catcaattcactccctccgtccaaaatgtctgttagtagtgatgatgt 56477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 20478042 - 20478189
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20478042 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtacctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 20478141  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20478142 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 20478189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 27666189 - 27666042
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgtc 27666090  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||| ||||||||||| |||| | |||||| ||||||||||||    
T  27666089 catcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgt 27666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 79 - 229
Target Start/End: Complemental strand, 29996644 - 29996494
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 178  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  29996644 aaaaacgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttaca 29996545  T
Q  179 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    ||||||||||||||  |||||||| || |||| |||||||| |||||||||    
T  29996544 gacgtccatcaaattcgtccctccatccaaaaggtccgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 35401969 - 35402088
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35401969 gactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35402068  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  35402069 aatcaaatcagtccctccgt 35402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 35403708 - 35403589
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35403609  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  35403608 aatcaaatcagtccctccgt 35403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 39859353 - 39859209
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | ||||||| |||||||||||||||||    
T  39859353 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 39859254  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    | |||||   ||||||||||| ||||  ||||||||| |||||||    
T  39859253 cgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 20479808 - 20479689
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  20479808 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 20479709  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  20479708 aatcaaattagtccctccgt 20479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 37115650 - 37115503
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| ||||||||| ||||||| |  || ||||| |||||||||| | ||||||| | ||||| |||||||||||||||||||    
T  37115650 gactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtc 37115551  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  37115550 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 6602334 - 6602479
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||| |||||||||| ||||||||||| |||||||||| ||  |  |||||||||||| ||||||||| | ||||||||||||||||||||||||    
T  6602334 ggactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 6602433  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    ||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6602434 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 78104 - 77984
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||||||||   | | |     
T  78104 ggactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgc 78005  T
Q  184 ccatcaaatcagtccctccgt 204  Q
    | |||||||||||||||||||    
T  78004 caatcaaatcagtccctccgt 77984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 27664433 - 27664549
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||   | | ||| ||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaat 27664532  T
Q  188 caaatcagtccctccgt 204  Q
    |||||||||||||||||    
T  27664533 caaatcagtccctccgt 27664549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 78 - 232
Target Start/End: Complemental strand, 24228540 - 24228386
Alignment:
Q  78 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 177  Q
    |||||| || ||||||||||| ||||| |||||||||| |||||| ||| || |||||||||||||||| ||||||||| | |||||| |||||||||||    
T  24228540 taaaaatgattaatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttac 24228441  T
Q  178 agacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||||   |||||| |||| ||||  ||| ||||| ||||||||||    
T  24228440 agacgtccatcaaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 13169772 - 13169653
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 13169673  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  13169672 aatcaaatcagtccctccgt 13169653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 38474267 - 38474120
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| ||||| ||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||| ||||||||||||||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
     ||||||   |||| |||||| ||||  ||||||||| ||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 34777036 - 34776903
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    ||||||||||||||||| ||| |||||| |||||| ||| || ||| | |||||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  34777036 taatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 34776937  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||   ||||||||||| ||||  |||||||||    
T  34776936 caaaatggtccctccgtccaaaaactccgttagt 34776903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 30940550 - 30940402
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||| ||||| || |||||||||| |||||||||| || |||||| || |||||| ||||||||| | ||||||||||||||||||| ||||    
T  30940550 ggactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgt 30940451  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
     |||||||   ||| ||||||| ||||  ||||||||| ||||||||||    
T  30940450 tcatcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 47384294 - 47384413
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||||||||||  || || ||||||| |||||||| ||||||||| |||||||||| ||||||   | | |||    
T  47384294 gactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaatgtc 47384393  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  47384394 aatcaaatcagtccctccgt 47384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 88 - 205
Target Start/End: Complemental strand, 37796302 - 37796185
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||| ||||||||||||| ||||||| || || |||||||   |||||| ||||||||| | |||||||||||||||||| |||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccat 37796203  T
Q  188 caaatcagtccctccgtc 205  Q
    ||||  ||||||||||||    
T  37796202 caaaatagtccctccgtc 37796185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 45359335 - 45359480
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||| ||||| |||| |||||||| |||||||||  || | ||||| |||||||| ||||||||| | ||||||| ||||||||||||||||    
T  45359335 ggactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgt 45359434  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    ||||||||   |||||||| || ||||  ||||||||| |||||||    
T  45359435 ccatcaaaatggtccctccatccaaaagctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 39857648 - 39857764
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||| ||||||   | | ||| ||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaat 39857747  T
Q  188 caaatcagtccctccgt 204  Q
    |||||||||||||||||    
T  39857748 caaatcagtccctccgt 39857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 47386333 - 47386186
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||| |||||| ||||||| |  || ||||||| |||||||| ||||||||  | |||||| || |||||||||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgtc 47386234  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   |||  |||||| ||||  ||||||||| ||||||||||    
T  47386233 catcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 37113936 - 37114060
Alignment:
Q  80 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 179  Q
    |||| ||||||||||||||||||||||||||||||| |||||| ||  || ||| |||||||||||| ||||||||| | ||||||||| |||||   |     
T  37113936 aaaaagactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaa 37114035  T
Q  180 acgtccatcaaatcagtccctccgt 204  Q
    | ||| |||||||||||||||||||    
T  37114036 atgtcaatcaaatcagtccctccgt 37114060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 29994907 - 29994966
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattt 145  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattt 29994966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 24226582 - 24226700
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 185  Q
    |||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||| ||||||| | | || |||| |||||||   | | |||     
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtca 24226681  T
Q  186 atcaaatcagtccctccgt 204  Q
    |||||||||||||||||||    
T  24226682 atcaaatcagtccctccgt 24226700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 13168142 - 13168267
Alignment:
Q  107 ttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccct---gaattttacagacgtccatcaaatcagtccctccg 203  Q
    ||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||   |||||||||||||||||||||||   |||| ||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccg 13168241  T
Q  204 tctaaaatgtccgttagtagtgatga 229  Q
    || ||||  ||||||||| |||||||    
T  13168242 tccaaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 202
Target Start/End: Original strand, 23904582 - 23904700
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||||||||||||||||||||||| |||||||||  || |||||| ||||||||| | ||||| | | ||||||| |||||||   | | ||    
T  23904582 ggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgt 23904681  T
Q  184 ccatcaaatcagtccctcc 202  Q
    | |||||||||||||||||    
T  23904682 caatcaaatcagtccctcc 23904700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 38549546 - 38549662
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||| ||||||||||||||||||| ||||||| || || ||||||||||||||||  |||||||| | ||| |||  ||||||   | | ||    
T  38549546 ggactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgt 38549645  T
Q  184 ccatcaaatcagtccct 200  Q
    |||||||||||||||||    
T  38549646 ccatcaaatcagtccct 38549662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 22155936 - 22155817
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||| || |||||||||||||||| |||||||||| || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22155936 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22155837  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  22155836 aatcaaatcagtccctccgt 22155817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 22211851 - 22211732
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||| || |||||||||||||||| |||||||||| || ||||||| |||||||| | ||||| | | || ||||||||||||   | | |||    
T  22211851 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22211752  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  22211751 aatcaaatcagtccctccgt 22211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 48228027 - 48227913
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||| ||||||||| |||||||||  || ||||||  |||||||| ||||||||| | || ||||||||||||   | | ||| ||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaat 48227928  T
Q  188 caaatcagtccctcc 202  Q
    |||||||||||||||    
T  48227927 caaatcagtccctcc 48227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 6605483 - 6605397
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||||| || |||||||||| ||||||| | | |||||||||||||||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaattt-gttcctgaattttgcgaaatagctatttagtccctgaattt 6605397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 46437107 - 46437226
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||  |||||||| ||||||| | | || |||| |||||||   | | |||    
T  46437107 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 46437206  T
Q  185 catcaaatcagtccctccgt 204  Q
     | |||||||||||||||||    
T  46437207 aaccaaatcagtccctccgt 46437226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 23906357 - 23906295
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 146  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || ||||||||| ||||||    
T  23906357 ggactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 33038911 - 33038801
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    ||||||||||||||||||||| |    ||||  || ||| ||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||       
T  33038911 tcaaattcgtccttgaatttttatgggtcggtcaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaag 33038812  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  33038811 gtccctccgtc 33038801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 35693450 - 35693347
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatca--aattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 228  Q
    ||||||| |||||||| || ||||||   ||||||||||||||||||||||||||||||||||   |||||||| || ||||  || |||||| ||||||    
T  35693450 ttcgtccttgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatg 35693351  T
Q  229 atgt 232  Q
    ||||    
T  35693350 atgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 366747 - 366818
Alignment:
Q  134 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    |||||| | ||||| |||||||||||||||||||||||||| ||||||||| |||||||   ||||||||||    
T  366747 gtccctcagttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtc 366818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 7401949 - 7402000
Alignment:
Q  141 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 192  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  7401949 aatttatcgaaatatcaaattcgtccctgaatttaacagacgtccatcaaat 7402000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 200
Target Start/End: Original strand, 35691431 - 35691542
Alignment:
Q  89 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatc 188  Q
    ||||||||||||||||||||||||||| |||||||||  || |||||| || |||||| ||||||| | | || |||| |||||||   | | ||| |||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 35691530  T
Q  189 aaatcagtccct 200  Q
    ||||||||||||    
T  35691531 aaatcagtccct 35691542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 45463707 - 45463806
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  45463707 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 45463806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 46996816 - 46996706
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||||||||| |||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||       
T  46996816 tcaaattcgtccctgaattttcacgcgtcggccaacttcgtccctcaattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaag 46996717  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  46996716 gtccctccgtc 46996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 198
Target Start/End: Complemental strand, 13039722 - 13039618
Alignment:
Q  94 ctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatc 193  Q
    ||||| |||||||||||||||| |||||||    || ||||||||| |||||| ||||||| | | ||||||||||||||||  | | ||| ||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatc 13039623  T
Q  194 agtcc 198  Q
    |||||    
T  13039622 agtcc 13039618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 34774998 - 34775117
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| |||||||||||| ||||||||| |||||||||  || ||| | | |||||||| | ||||| | | |||||||||||||||   | |  ||    
T  34774998 gactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatttacaaaatatc 34775097  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  34775098 aatcaaatcagtccctccgt 34775117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 45361365 - 45361246
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||| |||||||||||| |||||| ||  ||||| || |||||||||| | |||||   | ||||||| |||| ||   | | |||    
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaacttacaaaatgtc 45361266  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  45361265 aatcaaatcagtccctccgt 45361246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 27955380 - 27955490
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    ||||||||||||||||||||| |   ||| || || ||| ||||| |||||| ||||||||||| ||| |  ||||||||  |||||||||||||||       
T  27955380 tcaaattcgtccttgaatttttacggatcagctaaattcatccctcaattttacgaaatatcaacttaatttctgaatttgtcagacgtccatcaaagag 27955479  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  27955480 gtccctccgtc 27955490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 187
Target Start/End: Complemental strand, 38613595 - 38613503
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||| |||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||    
T  38613595 tcaaattcgtccttcaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccat 38613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 183
Target Start/End: Complemental strand, 47341800 - 47341712
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||    
T  47341800 tcaaattcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgt 47341712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 116
Target Start/End: Complemental strand, 35693465 - 35693434
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttg 116  Q
    ||||||||||||||||||||||||||||||||    
T  35693465 gactaatacctcaaattcgtccttgaattttg 35693434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Original strand, 2167529 - 2167599
Alignment:
Q  135 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||| ||||||||   |||||||||||    
T  2167529 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtc 2167599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 23953815 - 23953925
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||||||||||| |||||| |    |||| ||| ||||||| | |||| | ||||||||||| ||||||| |||||||  |||||||| ||||||       
T  23953815 tcaaattcgtccttaaatttttacgggtcggtaaaattcgtccatcaattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaag 23953914  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  23953915 gtccctccgtc 23953925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 4322633 - 4322560
Alignment:
Q  148 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    |||||||||||| ||||||||||||||    ||| |||||||| |  ||||||||||| |||| ||||||||||    
T  4322633 cgaaatatcaaaatagtccctgaatttgtttgacatccatcaatttcgtccctccgtccaaaaggtccgttagt 4322560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 11682828 - 11682901
Alignment:
Q  132 tcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    |||||||| |||| | | ||||||||||||||||| ||||||    ||||||||||||| | ||||||||||||    
T  11682828 tcgtccctcaattatgcaaaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtc 11682901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 13018036 - 13018085
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtcc 137  Q
    ||||||||||||||| |||||||||||| ||||||| || || |||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcc 13018085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 35344368 - 35344295
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 204  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||   ||||||||||||||   ||||||||||    
T  35344368 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttataagacgtccatcaaaaaggtccctccgt 35344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 46812696 - 46812600
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    |||| |||||||||||||||| |  | ||||| || ||| ||||| ||||    |||||||||| ||||||||| |||||  |||||||||||||||    
T  46812696 tcaacttcgtccttgaatttttacgagtcggccaaattcatccctcaattacgtgaaatatcaatttagtccctaaatttgtcagacgtccatcaaa 46812600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 7e-64; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 81 - 232
Target Start/End: Original strand, 27691150 - 27691301
Alignment:
Q  81 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27691150 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaga 27691249  T
Q  181 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||| ||||||||||| |||| |||||| | ||||||||||||    
T  27691250 cgtccatcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgt 27691301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 27407044 - 27406894
Alignment:
Q  82 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 181  Q
    |||||||||||||||||| | |||||||||||||||||||| ||| |||||||||| |||||| |||||||||| ||| |||||||||||||||||||||    
T  27407044 aaggactaatacctcaaaatagtccttgaattttgaaaaattggccaatttcgtccatgaattattcgaaatattaaaatagtccctgaattttacagac 27406945  T
Q  182 gtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||||||||||| ||||||| |||||||||||||  |||||||||||    
T  27406944 gtccatcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgt 27406894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 78 - 232
Target Start/End: Complemental strand, 33708954 - 33708801
Alignment:
Q  78 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 177  Q
    |||| |||||||||||||||||||| |||||||||||| ||||| |||  ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  33708954 taaataggactaatacctcaaattcatccttgaattttaaaaaa-cggtcaatttcgtccctgaattttgcgaaatattaaattagtccctgaattttac 33708856  T
Q  178 agacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    | |||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  33708855 aaacgtccatcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgt 33708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 13282478 - 13282625
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  13282478 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 13282577  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  13282578 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 15305815 - 15305944
Alignment:
Q  103 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 202  Q
    |||||||||||||||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15305815 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15305914  T
Q  203 gtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||| ||||| |||||||  |||||||||||    
T  15305915 gtccaaaatatccgttaacagtgatgatgt 15305944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 15486184 - 15486313
Alignment:
Q  103 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 202  Q
    |||||||||||||||||||| ||  ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15486184 gtccttgaattttgaaaaattggtcaattttgtccctgaattatttgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 15486283  T
Q  203 gtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||| ||||| |||||||  |||||||||||    
T  15486284 gtccaaaatatccgttaacagtgatgatgt 15486313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 8609931 - 8609787
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||| |||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 8609832  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  8609831 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 13108480 - 13108336
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| |||||||||||||||||||||| |||||||||| || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  | ||||||| |||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 601793 - 601674
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  601793 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 601694  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  601693 aatcaaattagtccctccgt 601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 80 - 204
Target Start/End: Complemental strand, 33762807 - 33762683
Alignment:
Q  80 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 179  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   |     
T  33762807 aaaatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaa 33762708  T
Q  180 acgtccatcaaatcagtccctccgt 204  Q
    | ||| ||||||||| |||||||||    
T  33762707 atgtcaatcaaatcaatccctccgt 33762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 38547228 - 38547372
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||| |||||||||||||||| |||||||||| || | ||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 38547327  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   |||||||| || ||||  ||||||||| |||||||    
T  38547328 catcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 29237151 - 29237240
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 29239276 - 29239187
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  29239276 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 77 - 204
Target Start/End: Original strand, 8608229 - 8608357
Alignment:
Q  77 ataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctg-aatttttcgaaatatcaaattagtccctgaatttt 175  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||     
T  8608229 ataaaaaggactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaattta 8608328  T
Q  176 acagacgtccatcaaatcagtccctccgt 204  Q
      | | ||| |||||||||||||||||||    
T  8608329 taaaatgtcaatcaaatcagtccctccgt 8608357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 88 - 232
Target Start/End: Original strand, 42941777 - 42941921
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||  |||||||  | ||||||||||||||||||||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||  |||||||||||| ||||| ||||||||| | ||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 27692926 - 27692807
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtc 27692827  T
Q  185 catcaaatcagtccctccgt 204  Q
     || ||||||||||||||||    
T  27692826 aattaaatcagtccctccgt 27692807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 33761069 - 33761188
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33761168  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  33761169 aatcaaatcagtccctccgt 33761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 38548920 - 38548801
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | |  ||    
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttc 38548821  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  38548820 aatcaaatcagtccctccgt 38548801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 33707207 - 33707325
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 185  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||     
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtca 33707306  T
Q  186 atcaaatcagtccctccgt 204  Q
    |||||||||||| ||||||    
T  33707307 atcaaatcagtcactccgt 33707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 35509214 - 35509333
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35509313  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||||||||| |||||    
T  35509314 aatcaaatcagtccatccgt 35509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 35510908 - 35510789
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||  ||||||||||||||||||||||||||   | | |||    
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 35510809  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  35510808 aatcaaatcagtccctccgt 35510789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 13106804 - 13106893
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||    
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattt 13106893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 15308350 - 15308261
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 15488719 - 15488630
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 13284081 - 13283965
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||||   | | ||| ||    
T  13284081 taataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaat 13283982  T
Q  188 caaatcagtccctccgt 204  Q
    |||||||||||||||||    
T  13283981 caaatcagtccctccgt 13283965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 41825785 - 41825641
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||||||||||||| |||||||    || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41825686  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||   ||| ||||||| ||||  || |||||||||||||||||    
T  41825685 caaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 41042728 - 41042581
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||| |||| |||||||||||||| |||||| ||| || || |||||||||||||  |||||||| | |||||||||||||||||||| ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 42943515 - 42943396
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||   | | |||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 42943416  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  42943415 aatcaaatcagtccctccgt 42943396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 232
Target Start/End: Original strand, 22272332 - 22272483
Alignment:
Q  83 aggactaatacctcaaattcgtccttgaattttgaaaaa--tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 180  Q
    ||||||||||||||||||||||| ||||||||| |||||  || |  || |||||||||||||||| || |||||| | ||||||||||||||||||| |    
T  22272332 aggactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtccctgaattttacaaa 22272431  T
Q  181 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||||||  ||||||||| || ||||  ||||||||| ||||||||||    
T  22272432 cgtccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 26242455 - 26242311
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    ||||||||||| ||||| |||||||||| ||||||| || || ||||||||| |||||| ||||||||| | |||||| |||||||||||||||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacgtccat 26242356  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||   ||||||||||| ||||  ||||||||| | ||||||||    
T  26242355 caaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 13486243 - 13486096
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| || |||||||||| |||||||||  |  |||||| ||| ||||| ||||||||| | |||||||||||||||||||||||||    
T  13486243 gactaatacctcaaatttgtgcttgaatttttaaaaatcggtcagattcgtctctggattttgcgaaatatctatttagtccctgaattttacagacgtc 13486144  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||||||| ||| ||||  ||| ||||||||||||||||    
T  13486143 catcaaaatggtccctctgtccaaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 7745256 - 7745109
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| |||||||||||| ||||||||| ||||||| || || |||||| ||||||||| ||||||||  | |||||||||| ||||||||||| ||    
T  7745256 gactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatc 7745157  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   |||||||| || ||||  ||||||||| ||||||||||    
T  7745156 catcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 26238726 - 26238845
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||| | |||||||  ||||||   | | |||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 26238825  T
Q  185 catcaaatcagtccctccgt 204  Q
    ||||||||||||||||||||    
T  26238826 catcaaatcagtccctccgt 26238845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 27404213 - 27404299
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaattt 27404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 18645752 - 18645813
Alignment:
Q  23 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18645752 agttcggttgatgatctaagcgatactaaaggagtttaaagcacatttgctattataaaaag 18645813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 34681156 - 34681074
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtcc 166  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||    
T  34681156 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtcc 34681074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 5036446 - 5036551
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 185  Q
    ||||||||||||||||||||||| |||||| ||||||| |  || ||||||||||||||||  |||||||| | ||||||| |||||||||||||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  186 atcaaa 191  Q
    ||||||    
T  5036546 atcaaa 5036551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 22273980 - 22273861
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || || ||| ||||||||| | ||||||| | |||||||||||||||   | | |||    
T  22273980 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaatgtc 22273881  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  22273880 aatcaaatcagtccctccgt 22273861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 41823890 - 41824009
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||| ||||||||||||||||||| ||||||| || |||||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||     
T  41823890 gactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtt 41823989  T
Q  185 catcaaatcagtccctccgt 204  Q
    ||||||||||||||||||||    
T  41823990 catcaaatcagtccctccgt 41824009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 232
Target Start/End: Complemental strand, 9673296 - 9673162
Alignment:
Q  98 aattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 197  Q
    ||||||||||||||| || |  |||  || || ||||||||||||||||  |||||||| | ||| ||||||||||||||||||||||||||||   |||    
T  9673296 aattcgtccttgaatcttcatcaattagctaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtc 9673197  T
Q  198 cctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||||||||  | ||||||| ||||||||||    
T  9673196 cctccgtctaaaagcttcgttagtggtgatgatgt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 600759 - 600819
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatt 144  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||    
T  600759 ggactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 5038150 - 5038032
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| ||||||||| |||||||||  || ||||| | |||||||| ||||||| | | |||||||||||||||   | | |||    
T  5038150 gactaatacctcaaattcgtc-ttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttacaaaatgtc 5038052  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  5038051 aatcaaatcagtccctccgt 5038032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 13484545 - 13484613
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaat 153  Q
    ||||||| ||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||    
T  13484545 gactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaat 13484613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 43262226 - 43262107
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||| |||||| ||||||| || || |||| |||| |||||| ||||||||| | |||||||  ||||||   | | |||    
T  43262226 gactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 43262127  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||| ||||||    
T  43262126 aatcaaatcagtctctccgt 43262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 28433830 - 28433704
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||| ||||||| |||||||| ||  |||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||| | |      
T  28433830 tcaatttcgtccctgaattttcaaggatcggccaaattcgtccctcaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcgatttc 28433731  T
Q  195 gtccctccgtctaaaatgtccgttagt 221  Q
    ||||||||||| |||| || |||||||    
T  28433730 gtccctccgtccaaaaggttcgttagt 28433704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 31821428 - 31821538
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||||||||| |||||||| | |  ||||  || ||||||||| |||| | ||||||||||| |||||||| ||||||  |||||||||||||||       
T  31821428 tcaaattcgtccctgaattttcacacgtcggtcaacttcgtccctcaattatgcgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaag 31821527  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  31821528 gtccctccgtc 31821538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 40339760 - 40339677
Alignment:
Q  149 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||| | ||||||| ||||||||||||| ||||||||||   |||||| | || ||||  ||||||||||||||||||||    
T  40339760 gaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 41040720 - 41040839
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| || |||||  ||||||||| | ||||| | | || |||| |||||||   | | |||    
T  41040720 gactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaatttacaaaatgtc 41040819  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||| ||||||||||    
T  41040820 aatcaaatcggtccctccgt 41040839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 11788367 - 11788441
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    ||||||||  ||||| ||||||||||||||| ||||  |||||| |||||||||||||||||   ||||||||||    
T  11788367 ttcgtcccctaatttatcgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtc 11788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 40020713 - 40020623
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  40020713 ttcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 40020623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 42897888 - 42897778
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||| |||||||||||||| |    ||||| || ||||||||| |||| |  |||||||||| ||||||| |||||||  |||||||||||||||       
T  42897888 tcaaatccgtccttgaatttttacgggtcggccaaattcgtccctcaattatgtgaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaag 42897789  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  42897788 gtccctccgtc 42897778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 37526084 - 37526027
Alignment:
Q  148 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||   |||||||||||    
T  37526084 cgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtc 37526027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 462484 - 462388
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||||||||| ||||||||| | | |||||| || ||| ||| | |||| | ||||||||||| ||||||| |||||||  || ||||||||||||    
T  462484 tcaaattcgtcattgaatttttacagatcggccaaattcatccgtcaattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaa 462388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 32822371 - 32822467
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    |||| |||||||||||||||| |   |||||| || ||| ||||| |||| ||  ||||||||| |||||||||||||||  |||| ||||||||||    
T  32822371 tcaacttcgtccttgaatttttatggatcggccaaattcatccctcaattatttaaaatatcaacttagtccctgaatttgtcagatgtccatcaaa 32822467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 33160262 - 33160166
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||||||||||||||||||| | |  ||||| || ||| ||||| |||| |  |||||||||| |||||| ||||||||  |||||| ||||||||    
T  33160262 tcaaattcgtccttgaattttcacaggtcggccaaattcatccctcaattatgtgaaatatcaacttagtctctgaatttgtcagacgcccatcaaa 33160166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 33750472 - 33750388
Alignment:
Q  121 atcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    |||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  ||||| | |||||||   |||||||||||    
T  33750472 atcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtc 33750388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 31201230 - 31201148
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 204  Q
    ||||| || ||||||| | |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  31201230 tcggccaaattcgtccatcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 9184446 - 9184503
Alignment:
Q  148 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    |||||||||||||||||||||||||||  |||||||| ||| ||   |||||||||||    
T  9184446 cgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtc 9184503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 29621905 - 29621758
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29621905 gactaatacctcaaaatagtcattgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 29621806  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  29621805 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 29621758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 81 - 232
Target Start/End: Complemental strand, 42473735 - 42473584
Alignment:
Q  81 aaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacaga 180  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  42473735 aaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaattttacaga 42473636  T
Q  181 cgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||||||||||||| |||||| |||||||||||||  |||||||||||    
T  42473635 cgtccatcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgt 42473584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 88 - 232
Target Start/End: Original strand, 40780553 - 40780697
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  40780553 taatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtccat 40780652  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||||||||||||| |||||||||||||  |||||||||||    
T  40780653 caaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 40780697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 2854450 - 2854304
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2854450 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaa-atcaaattagtccctgaattttacagacgtc 2854352  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    || |||||  ||||||||||| |||| |||| ||| ||||||||||||    
T  2854351 caacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgt 2854304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 24541336 - 24541188
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 24541237  T
Q  185 catcaaa-tcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||| |||   |||||||| |||| |||  ||| ||||||||||||    
T  24541236 catcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgt 24541188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 17574318 - 17574462
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 17574417  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  17574418 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 36057738 - 36057590
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||| |||||||||||||||||||    
T  36057738 ggactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgt 36057639  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||   ||||||||||| ||||  ||||||| | ||||||||||    
T  36057638 ccatcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 7267841 - 7267987
Alignment:
Q  83 aggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 182  Q
    ||||||||||||||||||||||||||||||||| |||||||| | || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||    
T  7267841 aggactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacg 7267940  T
Q  183 tccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||||    |||||||||| ||||  ||||||||| |||||||    
T  7267941 tccatcaaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 40782300 - 40782181
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 40782201  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  40782200 aatcaaattagtccctccgt 40782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 2852886 - 2853005
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  2852886 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 2852985  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  2852986 aatcaaatcagtccctccgt 2853005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 7269541 - 7269446
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||| ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  7269541 aaaaatgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 7269446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 21843081 - 21842962
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  21843081 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 21842982  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  21842981 aatcaaatcagtccctccgt 21842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 29620138 - 29620257
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||   | | |||    
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtc 29620237  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  29620238 aatcaaattagtccctccgt 29620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 34327635 - 34327782
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||  ||||| ||| || |||||| ||||||||| ||||||||| | |||||||||||||||||||||||||    
T  34327635 gactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 34327734  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||| ||||||| ||||  || |||||| ||||||||||    
T  34327735 catcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 2179787 - 2179931
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| ||||||||||||| |||||||||  || ||||||||||||||||  |||||||| | ||| |||||||||||||||||| ||    
T  2179787 gactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatc 2179886  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  ||| ||||| |||||||    
T  2179887 catcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 12738825 - 12738706
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12738726  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  12738725 aatcaaatcagtccctccgt 12738706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 12801648 - 12801529
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| ||||||||| | |||||||||||||||   | | |||    
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12801549  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  12801548 aatcaaatcagtccctccgt 12801529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 204
Target Start/End: Complemental strand, 8541363 - 8541241
Alignment:
Q  82 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 181  Q
    |||||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||| |||||||   | |     
T  8541363 aaggactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaat 8541264  T
Q  182 gtccatcaaatcagtccctccgt 204  Q
    ||| |||||||||||||||||||    
T  8541263 gtcaatcaaatcagtccctccgt 8541241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 17578022 - 17577905
Alignment:
Q  87 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 186  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| | ||||||||||||||| | |||||||   | | ||| |    
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcatgaatttacaaaatgtcaa 17577923  T
Q  187 tcaaatcagtccctccgt 204  Q
    ||||||||||||||||||    
T  17577922 tcaaatcagtccctccgt 17577905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 229
Target Start/End: Complemental strand, 30468405 - 30468260
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||| ||||||||| |||||||||||||||| |||||| ||  || |||||| || |||||| ||||||||| | ||||||| ||||||||||||||||    
T  30468405 ggactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattttacagacgt 30468306  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    ||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  30468305 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 85 - 221
Target Start/End: Original strand, 8539675 - 8539811
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||    || ||||| | |||||||| ||||||||| | ||||||||||||||||||| |||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 8539774  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    |||||||  |||| |||| || ||||  |||||||||    
T  8539775 catcaaaatagtcgctccatccaaaagctccgttagt 8539811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 18625129 - 18624985
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||||||||||||| |   ||| || || ||||||||||||||||  |||||||| | |||||||||||||||||||  |||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtccctgaattttacactcgtccat 18625030  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||   |||| |||||| ||||  ||||||||||||||||||||    
T  18625029 caaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 30463900 - 30463989
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattt 30463989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 42471548 - 42471637
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| | |||||||    
T  42471548 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacatgaattt 42471637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 28813856 - 28813735
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaa--tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 182  Q
    ||||||||||||||||||||||||||||||  |||||  | ||| || ||||||| |||||||| ||||||||| | |||||||||||||||   | | |    
T  28813856 gactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatttacaaaatg 28813757  T
Q  183 tccatcaaatcagtccctccgt 204  Q
    |  |||||||||||||||||||    
T  28813756 taaatcaaatcagtccctccgt 28813735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 28822176 - 28822060
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||||||||||||| |||||| ||  || |||||||||||||||| ||||||  | | || |||| |||||||   | | ||| ||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaat 28822077  T
Q  188 caaatcagtccctccgt 204  Q
    |||||||||||||||||    
T  28822076 caaatcagtccctccgt 28822060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 34328916 - 34328797
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||  || ||||||| |||||||| | ||||| | | || |||| |||||||   | | |||    
T  34328916 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaatgtc 34328817  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||| ||||||    
T  34328816 aatcaaatcagtcgctccgt 34328797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 18728716 - 18728606
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||||||||| |||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  18728716 tcaaattcgtccctgaattttcacttgtcggccaacttcgtcccttaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 18728617  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  18728616 gtccctccgtc 18728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 43492212 - 43492131
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 176  Q
    |||||||||| ||| |||||| ||||||| || || ||| |||||||||||| ||||||||| | |||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatttta 43492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 38596878 - 38596974
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||||||||||||||||||| |    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||   ||||||||||||||    
T  38596878 tcaaattcgtccttgaatttttatgggtcggccaaattcgtccctcaattatgcgaaatatcaacttagtccctgaatttgttagacgtccatcaaa 38596974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 27075876 - 27075927
Alignment:
Q  141 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 192  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  27075876 aatttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaat 27075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 32087560 - 32087634
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    ||||||||| |||| | ||||||||||| ||||||||| |||||| |||||||||||||||   |||||||||||    
T  32087560 ttcgtcccttaattatgcgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtc 32087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 35395343 - 35395453
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||||| ||| |||||||| | |  ||||| || ||||||||| |||| | ||||||||||| ||||| |||||||||   ||||||||||||||       
T  35395343 tcaaattcatccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaag 35395442  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  35395443 gtccctccgtc 35395453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 43318174 - 43318064
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    ||||||||||||||||||||| |    ||||| ||  || ||||| |||| | ||||||||||| |||||||||||||||  ||||||||||| |||       
T  43318174 tcaaattcgtccttgaatttttatgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaag 43318075  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  43318074 gtccctccgtc 43318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 32134231 - 32134320
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||||||||||| ||| ||||||||| |||||||  | || ||||||  ||||||||   ||||||| | |||||||||||||||    
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaattt 32134320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 41493847 - 41493931
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaat 172  Q
    ||||||||||| |||||||||||||||| ||||||| || || |||||||   ||||||  |||||||| | ||||||| |||||    
T  41493847 taatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaat 41493931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 33256410 - 33256520
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||||||||| |||||||| | |  ||||| || ||| ||| | |||| | ||||||||||| ||| ||  |||||||  |||||||||||||||  |    
T  33256410 tcaaattcgtccctgaatttttacacgtcggccaacttcatccttcaattatgcgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaa 33256509  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  33256510 gtccctccgtc 33256520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 19997164 - 19997225
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 192  Q
    ||||||||  |||||||| ||||||||||||| | ||||||||| |||||| | ||||||||    
T  19997164 ttcgtccccaaatttttcaaaatatcaaattacttcctgaatttaacagacattcatcaaat 19997225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 28819348 - 28819388
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcgg 125  Q
    ||||||||| |||||||| |||||||||||| |||||||||    
T  28819348 gactaatacatcaaattcctccttgaatttttaaaaatcgg 28819388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 9121792 - 9121645
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  9121792 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaattttgcagacgtc 9121693  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  9121692 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 9121645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 47013206 - 47013059
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47013206 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcaaacgtc 47013107  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||    
T  47013106 catcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 47013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 33602765 - 33602621
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtccctgaattttacagacgtccgt 33602666  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||| |||||||||||| |||| ||||||||||| |||||||||    
T  33602665 caaattagtccctccgtccaaaaggtccgttagtaatgatgatgt 33602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 46583680 - 46583533
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 46583581  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||  ||||||||||| |||| |||||||| | ||||||||||    
T  46583580 catcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 4856090 - 4855946
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4855991  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  ||||||| | |||||||    
T  4855990 catcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 34778262 - 34778118
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  34778262 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtc 34778163  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  34778162 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 46582010 - 46582129
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46582010 gactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46582109  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  46582110 aatcaaatcagtccctccgt 46582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 34776569 - 34776658
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaattt 34776658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 37346053 - 37345932
Alignment:
Q  83 aggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacg 182  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||   | | |    
T  37346053 aggactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 37345954  T
Q  183 tccatcaaatcagtccctccgt 204  Q
    || |||||||||||||||||||    
T  37345953 tcaatcaaatcagtccctccgt 37345932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 2869579 - 2869726
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||| || |||||||||||||||    
T  2869579 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtc 2869678  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  2869679 catcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 8167942 - 8168061
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||| |   | | |||    
T  8167942 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatgtc 8168041  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  8168042 aatcaaatcagtccctccgt 8168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 8169657 - 8169538
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||   | | |||    
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtc 8169558  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||||| |||||||||    
T  8169557 aatcaaatcaatccctccgt 8169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 25276742 - 25276861
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||   | | |||    
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 25276841  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  25276842 aatcaaatcagtccctccgt 25276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 26223587 - 26223676
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 26223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 6818802 - 6818658
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||| ||||  | ||||||| | |||||||||||||||||||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgtc 6818703  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6818702 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 25278492 - 25278348
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| | | ||||||| ||||||||||| |||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacgtc 25278393  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  25278392 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 31238619 - 31238475
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || || ||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 31238520  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   |||| || ||| ||||  ||||||||| |||||||    
T  31238519 catcaaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 9120039 - 9120158
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 9120138  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  9120139 aatcaaattagtccctccgt 9120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 27089368 - 27089249
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| |||||||||||   | | |||    
T  27089368 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaaatgtc 27089269  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||||||||| |||||    
T  27089268 aatcaaatcagtccttccgt 27089249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 37344339 - 37344486
Alignment:
Q  82 aaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagac 181  Q
    |||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||| | | ||||||  ||||||||||| ||    
T  37344339 aaggactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatac 37344438  T
Q  182 gtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    ||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  37344439 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 27087283 - 27087430
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgt 27087381  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||   | || |||||| ||||  ||||||||| ||||||||||    
T  27087382 ccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 47011456 - 47011575
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtc 47011555  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||| |||||||||||||    
T  47011556 aatcaactcagtccctccgt 47011575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 78 - 187
Target Start/End: Complemental strand, 25279084 - 25278975
Alignment:
Q  78 taaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac 177  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| || || ||||| ||| |||||| ||||||||| | ||||||||||||||||||    
T  25279084 taaaaatgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaattttac 25278985  T
Q  178 agacgtccat 187  Q
    ||||||||||    
T  25278984 agacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 51896276 - 51896129
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||| ||||||||||| ||||||| |||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||||||||||||||||| ||    
T  51896276 gactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtccctgaattttacagatgt 51896178  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||  |||||||||||| ||||  || |||||| ||||||||||    
T  51896177 ccatcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 1444270 - 1444151
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||   | | |||    
T  1444270 gactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgtc 1444171  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  1444170 aatcaaattagtccctccgt 1444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 3013600 - 3013447
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| ||| ||| |  || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgtc 3013501  T
Q  185 ------catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
          |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  3013500 catggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 4854409 - 4854499
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    |||||||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||| |||||||||||||||||||||    
T  4854409 ggactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaattt 4854499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 50556221 - 50556078
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| |||||||||||| ||||||||| ||||||| |  || |||||| ||||||||| ||||||||| | ||||||||| |||||||||||||||    
T  50556221 gactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtc 50556122  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 228  Q
     ||||||   ||||||||||| ||||  ||||||||| ||||||    
T  50556121 tatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 31236819 - 31236938
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||||| | ||||| |||||||||   | |  |    
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcgaaatatctatttagttcctgaatttacaaaatat 31236917  T
Q  184 ccatcaaatcagtccctccgt 204  Q
    | |||||||||||||||||||    
T  31236918 caatcaaatcagtccctccgt 31236938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 33599229 - 33599335
Alignment:
Q  96 caaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcag 195  Q
    ||||||||||||||||||||||||||||||  || ||||||| |||||||| ||||||||||||||| || ||||||||   | | ||| ||||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcag 33599328  T
Q  196 tccctcc 202  Q
    |||||||    
T  33599329 tccctcc 33599335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 1442599 - 1442668
Alignment:
Q  163 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  1442599 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgt 1442668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 52641888 - 52642007
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttac-agacgt 183  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||| ||||||||  | ||||| ||| || ||||| | | ||    
T  52641888 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagt-cctcaaatttacaaaatgt 52641986  T
Q  184 ccatcaaatcagtccctccgt 204  Q
     ||||||||||||||||||||    
T  52641987 tcatcaaatcagtccctccgt 52642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 2871165 - 2871046
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| |||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||| | | || |||  |||||||   | | |||    
T  2871165 gactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgtc 2871066  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  2871065 aatcaaatcagtccctccgt 2871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 15104487 - 15104588
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 230  Q
    ||||| |||||||||| ||||||||| | ||||||||||||||||||||||||||||||||   |||| |||||| ||||  ||| ||||| ||||||||    
T  15104487 ttcgttcctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgat 15104586  T
Q  231 gt 232  Q
    ||    
T  15104587 gt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 52643736 - 52643648
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 176  Q
    ||||||||||||||||||||| |||||| ||||||| |  || |||||||||||||||| ||||||||  | |||||||||||||||||    
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtccctgaatttta 52643648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 37088225 - 37088106
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||| |||||||||||| |||||||||| || ||||| |||||||||| ||||||| | | || |||| | |||||   | | |||    
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtc 37088126  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  37088125 aatcaaatcagtccctccgt 37088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 50554164 - 50554278
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 185  Q
    |||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| | | ||||| |||||||||   | | |||     
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtca 50554263  T
Q  186 atcaaatcagtccct 200  Q
    |||||||||||||||    
T  50554264 atcaaatcagtccct 50554278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 33599187 - 33599248
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 146  Q
    |||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||||    
T  33599187 gactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaatttt 33599248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 1442551 - 1442611
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 146  Q
    |||||||||||| | | |||||||||||||||||||||||| |||||||||||||||||||    
T  1442551 actaatacctcacaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttt 1442611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 3011858 - 3011974
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    ||||||||||||||||||||| |||||| ||||||| |  || ||||| |||||||||| ||||||||| | |||||| ||||||||   | | ||| ||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaat 3011957  T
Q  188 caaatcagtccctccgt 204  Q
    ||||||||||| |||||    
T  3011958 caaatcagtccatccgt 3011974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 6816866 - 6816926
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 146  Q
    |||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaatttt 6816926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 25278854 - 25278934
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatc-ggcaaatttcgtccctgaatttttcgaaatatcaaattagtc 165  Q
    |||||||||||||||||| |||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||| | ||||||    
T  25278854 gactaatacctcaaattcatccttgaattttcaaaaatcagtcaaattt-gtccctgaattttgcgaaatatctatttagtc 25278934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 51894570 - 51894686
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 186  Q
    |||||| |||||||||| |||||||||| |||||| || ||||||| ||| ||||||||| ||||||||  | |||||||||||||||   | | ||| |    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaattt-gtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaa 51894668  T
Q  187 tcaaatcagtccctccgt 204  Q
    ||||||||||||||||||    
T  51894669 tcaaatcagtccctccgt 51894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 42134492 - 42134602
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    ||||||||||||||||||||| |    ||||| ||  || ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  42134492 tcaaattcgtccttgaatttttacgggtcggccaaaatcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 42134591  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  42134592 gtccctccgtc 42134602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 23577636 - 23577725
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||| |||||||| ||||| |||  |||||||||||  ||||||| || | |||||| ||||||||||||||||||  |||||||    
T  23577636 gactaatacatcaaattcatccttcaatcctgaaaaatcgggcaatttcgaccttcaattttgcgaaatatcaaattagtcaatgaattt 23577725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 45044949 - 45045009
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattt 145  Q
    ||||||||||||||||||||||||||||||| |||||| ||   | |||||||||||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaattggtccaattcgtccctgaattt 45045009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 5783427 - 5783500
Alignment:
Q  148 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5783427 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5783500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 18184017 - 18183961
Alignment:
Q  135 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  18184017 tccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 18183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 36895588 - 36895528
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  36895588 ttcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 36895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 27940654 - 27940727
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 204  Q
    ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||   ||||||||||    
T  27940654 ttcgtccctcaattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 84 - 232
Target Start/End: Original strand, 43519423 - 43519571
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  43519423 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacgt 43519522  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||||| ||||||||||| |||| |||| ||| ||||||||||||    
T  43519523 ccatcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgt 43519571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 4173830 - 4173710
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | ||||    
T  4173830 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgt 4173731  T
Q  184 ccatcaaatcagtccctccgt 204  Q
    | ||||| |||||||||||||    
T  4173730 caatcaactcagtccctccgt 4173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 43507167 - 43507286
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43507266  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  43507267 aatcaaatcagtccctccgt 43507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 43508742 - 43508623
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43508643  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  43508642 aatcaaatcagtccctccgt 43508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 49523125 - 49523271
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 185  Q
    |||||||||||||||||||| ||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  186 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 41761867 - 41761723
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||||||||||||| |||||||||| || ||||||||  |||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||   ||||||||||| ||||  | ||||||| ||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 33266100 - 33265980
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||   | | ||    
T  33266100 ggactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 33266001  T
Q  184 ccatcaaatcagtccctccgt 204  Q
    | |||||||||||||||||||    
T  33266000 caatcaaatcagtccctccgt 33265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 319273 - 319392
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||   | | |||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 319372  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||| ||||||||||||    
T  319373 aatcaaaccagtccctccgt 319392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 5437811 - 5437930
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5437910  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  5437911 aatcaaattagtccctccgt 5437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 33264382 - 33264501
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||| |||||||||   | | |||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtc 33264481  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  33264482 aatcaaatcagtccctccgt 33264501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 51013975 - 51013856
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||| |||||||||||||   | | |||    
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtc 51013876  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  51013875 aatcaaatcagtccctccgt 51013856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 833223 - 833342
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 833322  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  833323 aatcaaattagtccctccgt 833342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 5439736 - 5439617
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5439637  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  5439636 aatcaaattagtccctccgt 5439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 51011926 - 51012070
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| |||||||||||||||||||||| |||||||||  || ||| | | |||||||| ||||||||| | |||||| ||||||||||||||||||    
T  51011926 gactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtc 51012025  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  || ||||||||||||||    
T  51012026 catcaaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 320989 - 320870
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||| |||| ||   | | |||    
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtc 320890  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||| |||||||||||||    
T  320889 aatcaactcagtccctccgt 320870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 835131 - 835012
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||| ||||||||||||||   | |||||    
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  835031 aatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 4169686 - 4169805
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||| |   ||||||||| ||||||||| |||||||||||||||||||||||||||   | | |||    
T  4169686 gactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 4169785  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||| ||||||||||||    
T  4169786 aatcaaaccagtccctccgt 4169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 76 - 232
Target Start/End: Original strand, 41781530 - 41781686
Alignment:
Q  76 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||| || ||||||||||||||||| || |||||||||| ||||||||| ||||||| ||||||||||||| | ||||||  | |||||||||||||||    
T  41781530 tataataatgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaattt-gtccctgaattttgcaaaatatttatttagtccctgaattt 41781628  T
Q  175 tacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||| |||||||||   ||||||||||| ||||  |||||||||  |||||||||    
T  41781629 tacagacatccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 35401749 - 35401868
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||  |||||||| | ||||||| |||||||   | | |||    
T  35401749 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatttacaaaatgtc 35401848  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  35401849 aatcaaatcagtccctccgt 35401868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 35404569 - 35404425
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||| |||| | |||||||||| |||||||||| || ||||||| | |||||| ||||||||  | ||| |||||||||||||||||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    || ||||   |||| |||||| ||||  ||||||||| |||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 84 - 232
Target Start/End: Original strand, 48813786 - 48813934
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||||||||||||||||||||||| ||||||| || || ||  |||||||||||| | ||||||  | ||||| ||||||||||| ||||||    
T  48813786 ggactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgt 48813885  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||   |||||| |||| ||||  || ||| || ||||||||||    
T  48813886 ccatcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 49524822 - 49524703
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||||||||||||||   | | |||    
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 49524723  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||||||||| |||||    
T  49524722 aatcaaatcagtccttccgt 49524703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 39345574 - 39345683
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    ||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||| | | |||||||||||||||   | | ||| |||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatca 39345673  T
Q  195 gtccctccgt 204  Q
    ||| ||||||    
T  39345674 gtctctccgt 39345683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 20493827 - 20493946
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| ||||||||| ||| |||||| || ||||| | |||||||| ||||||||| | ||||| |||||||||   | | |||    
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgtc 20493926  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  20493927 aatcaaatcagtccctccgt 20493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 43521193 - 43521109
Alignment:
Q  90 atacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    |||||||||||| || |||||||||||||||||| |  ||||||||   |||||||| |||||||||||||||||||||||||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaattt 43521109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 48645255 - 48645374
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| ||||||| |  || ||||||| |||||||| ||||||||| | |||||||  ||||||   | | ||     
T  48645255 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtt 48645354  T
Q  185 catcaaatcagtccctccgt 204  Q
    |||||||||||| |||||||    
T  48645355 catcaaatcagtacctccgt 48645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 232
Target Start/End: Complemental strand, 48646852 - 48646724
Alignment:
Q  104 tccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccg 203  Q
    |||||||||||| |||| || || || ||||||| |||||||  ||||||||| | |||||||||||||||||||||| | |||||||   |||| ||||    
T  48646852 tccttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccg 48646753  T
Q  204 tctaaaatgtccgttagtagtgatgatgt 232  Q
    || ||||  | ||||||| ||||||||||    
T  48646752 tccaaaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 201
Target Start/End: Original strand, 11601674 - 11601786
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 186  Q
    |||||||| |||||||| |||||||||| ||||||| | |||||||  ||||  |||||| | |||||| | ||||||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatcagtcaaattta-tccccaaattttgcaaaatat-atattagtccctgaattttacagacgtcca 11601771  T
Q  187 tcaaatcagtccctc 201  Q
    |||||  ||||||||    
T  11601772 tcaaaatagtccctc 11601786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 42980684 - 42980782
Alignment:
Q  134 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||| |||||||| |||||| || | ||||||||| ||||||||||||||||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  42980684 gtccatgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 11254113 - 11254238
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 178  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||||| || | |||| || |||||| ||||||| |   || |||| |||||||   |    
T  11254113 aaaaatgacaaatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaatttacaa 11254212  T
Q  179 gacgtccatcaaatcagtccctccgt 204  Q
     | ||| |||||||||||||||||||    
T  11254213 aatgtcaatcaaatcagtccctccgt 11254238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 39083676 - 39083775
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||| || ||||||||| |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39083676 tcggccaaattcgtccctaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39083775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 44558607 - 44558511
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    |||| |||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  44558607 tcaacttcgtccttgaattttcacgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 44558511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 5484577 - 5484676
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5484577 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5484676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 39921531 - 39921630
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39921531 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39921630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 43779954 - 43779855
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  43779954 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 43779855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 2691368 - 2691485
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 178  Q
    |||||||| ||||||||||| ||| || ||||||||| ||||||| || || |||||||   |||||| | ||||||| | ||||||||||||||||  |    
T  2691368 aaaaaggaataatacctcaacttcatc-ttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttttaa 2691466  T
Q  179 gacgtccatcaaatcagtc 197  Q
     | ||| ||||||||||||    
T  2691467 aatgtcaatcaaatcagtc 2691485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 219
Target Start/End: Original strand, 39189419 - 39189516
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 219  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  39189419 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 44794838 - 44794765
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 204  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  44794838 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 196
Target Start/End: Original strand, 20819986 - 20820096
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatc-ggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||| |||||||||||||||| ||||||| | |||||||  | ||| |||||| | ||||||  | ||||||||||||||||  | | |||    
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaattt-attcctaaattttgcaaaatatttatttagtccctgaattttcaaaatgtc 20820084  T
Q  185 catcaaatcagt 196  Q
     |||||||||||    
T  20820085 aatcaaatcagt 20820096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 27624869 - 27624912
Alignment:
Q  148 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  27624869 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 27624912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 221
Target Start/End: Original strand, 32652136 - 32652235
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||| || ||||||||  |||||  |||||||||||| |||||| |||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  32652136 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 32652235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 42982541 - 42982422
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||| | |||||  |||||||||||| ||||||| |  || |||||||||||||||| |||||||   | || |||| |||||||   | | |||    
T  42982541 gactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtc 42982442  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  42982441 aatcaaatcagtccctccgt 42982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 44994374 - 44994275
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  |||||||| || |||| ||||||||||    
T  44994374 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgttagt 44994275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 191
Target Start/End: Complemental strand, 52868254 - 52868167
Alignment:
Q  104 tccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    |||||||||||| |||||||||  || ||||||  | |||||| ||||||||| | |||||| |||||||| ||||||| | ||||||    
T  52868254 tccttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaa 52868167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 35996109 - 35996183
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    ||||||||| |||| | | ||||||||| ||| |||||||||||  |||||||||||||||   |||||||||||    
T  35996109 ttcgtccctcaattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtc 35996183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 10372820 - 10372711
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||||||||| |||||||| |    ||||| || || |||||| |||| | ||||||||||| ||  |||||||||||  |||||||||||||||       
T  10372820 tcaaattcgtccctgaattttcacgcgtcggccaaattagtccctcaattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaag 10372721  T
Q  195 gtccctccgt 204  Q
    ||||||||||    
T  10372720 gtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 47941857 - 47941930
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 204  Q
    |||||| || |||| | ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  47941857 ttcgtctctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 2693373 - 2693285
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 176  Q
    ||||||||||| |||||| ||||||||| ||||||| || || ||  | ||| |||||| ||||||||| | ||||||  |||||||||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaatttta 2693285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 2827468 - 2827524
Alignment:
Q  149 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 2827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 191
Target Start/End: Complemental strand, 13451058 - 13450998
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||||||  |||||  |||||||||||| |||||| |||||||  |||||||||||||||    
T  13451058 ttcgtcccccaatttaacgaaatatcaaaatagtccttgaatttatcagacgtccatcaaa 13450998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 116; Significance: 4e-59; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 3294 - 3441
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3294 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3393  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  3394 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 4466 - 4613
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4466 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 4565  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  4566 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 14432 - 14313
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 14333  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  14332 aatcaaatcagtccctccgt 14313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 3e-57; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 32456016 - 32455868
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  32456016 ggactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtcactgaattttgcagacgt 32455917  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||    
T  32455916 ccatcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgt 32455868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 3456766 - 3456893
Alignment:
Q  103 gtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 202  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3456766 gtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctcc 3456865  T
Q  203 gtctaaaatgtccgttagtagtgatgat 230  Q
    ||| ||||| ||||||| ||||||||||    
T  3456866 gtccaaaatatccgttaatagtgatgat 3456893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 13613706 - 13613559
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||| |||||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13613607  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||| |||||||||||| |||| |||| ||||| ||||||||||    
T  13613606 catcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 32518586 - 32518467
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||   | | |||    
T  32518586 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 32518487  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  32518486 aatcaaatcagtccctccgt 32518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 32439215 - 32439071
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| ||| ||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 32439116  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  || ||||||||||||||    
T  32439115 catcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 3480746 - 3480627
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   | | |||    
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtc 3480647  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  3480646 aatcaaattagtccctccgt 3480627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 32454248 - 32454367
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||   | | |||    
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 32454347  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  32454348 aatcaaattagtccctccgt 32454367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 20523367 - 20523513
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 185  Q
    |||||||| |||||||| |||| ||||||| |||||||||  || ||||||| |||||||| ||||||||| | ||||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtcc 20523466  T
Q  186 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  20523467 atcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 85 - 229
Target Start/End: Original strand, 32516877 - 32517021
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||| || ||||||||||| |||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatacgtc 32516976  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  32516977 catcaaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 10568403 - 10568546
Alignment:
Q  89 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatc 188  Q
    ||||| ||||||||||||||||||||| ||||||| |  || ||||||| |||||||  ||||||||  | ||||||||||||||||||||||||| |||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatc 10568502  T
Q  189 aaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||  |||||||||||| ||||  ||||||||| ||||||||||    
T  10568503 aaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 18645192 - 18645074
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||||||||||||| | | |||||| ||||||||| ||||||||||||||||||| |||||||   | | |||    
T  18645192 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-acaattcgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtc 18645094  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  18645093 aatcaaatcagtccctccgt 18645074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 232
Target Start/End: Complemental strand, 7373079 - 7372935
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||  ||||||||| |||||| ||  || |||||||||||||||| ||||||||  | |||||||||||||||||||| |||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtccctgaattttacaggcgtccat 7372980  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||   ||||||||||| ||||  ||| ||||| ||||||||||    
T  7372979 caaaatggtccctccgtccaaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 229
Target Start/End: Original strand, 11355223 - 11355366
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 185  Q
    |||||||||||||||||||||||||||||| |||||||||  || |||||| |||||||||  |||||||| | | | ||||||||||||||||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  186 atcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    | ||||   ||||||||||| ||||  |||| |||| |||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 10570008 - 10569888
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||| |||||||| | ||||||| | |||||||  ||||||   | | |||    
T  10570008 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaatgtc 10569909  T
Q  185 catcaaatcagtccctccgtc 205  Q
    |||||||||||||||||||||    
T  10569908 catcaaatcagtccctccgtc 10569888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 13610690 - 13610808
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcg-gcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||| ||||||||||||||||||| | |||||   | | ||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaattt-gtccctgaattttgcgaaatatcaaattagtccat-aatttacaaaatgt 13610787  T
Q  184 ccatcaaatcagtccctccgt 204  Q
    | |||||||||||||||||||    
T  13610788 caatcaaatcagtccctccgt 13610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 6899485 - 6899632
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| ||||||||||||| ||||||| |  || |||||| || ||||||  |||||||| | ||||||||| |||||||||||| ||    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatc 6899584  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   |||||| |||| ||||  |||||||||  |||||||||    
T  6899585 catcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 9400124 - 9400035
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||||||||||||||||||||||||||||||||| |  || ||| ||| |||||||| ||||||||| |||||||||| ||||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaattt 9400035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 11357289 - 11357164
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 178  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  11357289 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 11357190  T
Q  179 gacgtccatcaaatcagtccctccgt 204  Q
     | |||  ||||||||||||||||||    
T  11357189 aatgtcattcaaatcagtccctccgt 11357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 153
Target Start/End: Original strand, 32437140 - 32437208
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaat 153  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||    
T  32437140 gactaatacctcaaatttgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaat 32437208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 6902996 - 6902868
Alignment:
Q  73 tattataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaat 172  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||||| |  || ||||||||| |||||| || |||||| | |||||||  ||||    
T  6902996 tattataaaa--gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcg-aatatctatttagtcctcgaat 6902900  T
Q  173 tttacagacgtccatcaaatcagtccctccgt 204  Q
    ||   | | |||||||||||||||||||||||    
T  6902899 ttacaaaatgtccatcaaatcagtccctccgt 6902868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 9398713 - 9398807
Alignment:
Q  138 ctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||| ||||||||| | ||||||||||||||||| |||||| |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  9398713 ctgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 154
Target Start/End: Original strand, 7371175 - 7371244
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaata 154  Q
    |||||||||||||| |||||||||||||||| |||||||||| || || ||||||||||||| |||||||    
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 20525432 - 20525304
Alignment:
Q  76 tataaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 175  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||| ||  || ||| |||||||||||| | ||||| | | || |||| |||||||     
T  20525432 tataaaaacgactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaattta 20525333  T
Q  176 acagacgtccatcaaatcagtccctccgt 204  Q
      | | ||| |||||||||||||||||||    
T  20525332 caaaatgtcaatcaaatcagtccctccgt 20525304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 8605414 - 8605353
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 146  Q
    ||||||||||||||||||||||||||||||| ||||||| || || ||||||||| ||||||    
T  8605414 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaatttt 8605353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 7049828 - 7049904
Alignment:
Q  156 caaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||| |||||||||||||||||||||||||||||   ||||||||||| ||||  |||||| || ||||||||||    
T  7049828 caaattcgtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 14338584 - 14338480
Alignment:
Q  100 ttcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccc 199  Q
    |||||||||||||||| ||||||| || || |||||||   |||||| |||||| || ||||  ||||||||||| ||||||||||||||||   |||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccc 14338485  T
Q  200 tccgt 204  Q
    |||||    
T  14338484 tccgt 14338480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 3018519 - 3018450
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  3018519 tcggccaacttcgtccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 3018450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 21068628 - 21068744
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||||||||||||| || |||| |  || |||||||   |||||| ||||||||| | |||||||  ||||||   | | ||| ||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaat 21068727  T
Q  188 caaatcagtccctccgt 204  Q
    |||||||||||||||||    
T  21068728 caaatcagtccctccgt 21068744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 17952129 - 17952030
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  17952129 tcggccaaattcgtccccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 17952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  89 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 146  Q
    |||| ||||||||| |||||||||||| ||||||| || || ||||||||||||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 2968185 - 2968245
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||||||| |||| | ||||||||||| ||| |||||||||||  |||||||||||||||    
T  2968185 ttcgtccctcaattatgcgaaatatcaatttaatccctgaatttatcagacgtccatcaaa 2968245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 123
Target Start/End: Original strand, 21091109 - 21091144
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatc 123  Q
    |||||||||||||||||||||||||||| |||||||    
T  21091109 taatacctcaaattcgtccttgaattttcaaaaatc 21091144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 210
Target Start/End: Complemental strand, 35175977 - 35175862
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||| |||||||||||||||| |   |||||| || |||||| |  |||||  |||||||||||| ||||||||||||||    |||||||||||| |      
T  35175977 tcaatttcgtccttgaattttcagggatcggccaaattcgtctccaaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttc 35175878  T
Q  195 gtccctccgtctaaaa 210  Q
    ||||||||||| ||||    
T  35175877 gtccctccgtccaaaa 35175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 7051340 - 7051263
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatc 156  Q
    ||||| ||||||||||| |||||||   ||||||||| ||||||| |  || |||||| ||||||||| |||||||||    
T  7051340 aaaaatgactaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatc 7051263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 3152368 - 3152215
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 178  Q
    ||||| |||||||||||||||||  ||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  3152368 aaaaacgactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttaca 3152269  T
Q  179 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||    
T  3152268 gacgtccatcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 44794208 - 44794354
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||| |||||||||||||||||||||||||||| |||| |||    
T  44794208 gactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagtc 44794306  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||  ||||||||||| |||| |||||||| ||||||||||||    
T  44794307 catcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 91 - 232
Target Start/End: Original strand, 2660218 - 2660359
Alignment:
Q  91 tacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaa 190  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaa 2660317  T
Q  191 atcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||  ||||||||||| |||| ||| |||| ||  ||||||||    
T  2660318 attcgtccctccgtccaaaaggtctgttaataacgatgatgt 2660359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 53190903 - 53190759
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  53190903 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 53190804  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||   ||||||||||| ||||  ||||||||| |||||||    
T  53190803 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 46308807 - 46308926
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46308906  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  46308907 aatcaaatcagtccctccgt 46308926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 27899225 - 27899081
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 27899126  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    ||| |||   ||||||||||| ||||  ||||||||| |||||||    
T  27899125 cataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 38193599 - 38193480
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38193599 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38193500  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||||||||| |||||    
T  38193499 aatcaaatcagtccatccgt 38193480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 53094362 - 53094243
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53094263  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  53094262 aatcaaatgagtccctccgt 53094243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 54900163 - 54900044
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||   | | |||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtc 54900064  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  54900063 aatcaaatcagtccctccgt 54900044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 41979442 - 41979352
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  41979442 ggactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattt 41979352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 202
Target Start/End: Original strand, 3150252 - 3150369
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  3150252 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 3150351  T
Q  185 catcaaatcagtccctcc 202  Q
     |||||||||||||||||    
T  3150352 aatcaaatcagtccctcc 3150369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 85 - 210
Target Start/End: Original strand, 41977750 - 41977875
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  185 catcaaatcagtccctccgtctaaaa 210  Q
    | |||||   ||||||||||| ||||    
T  41977850 cgtcaaaatggtccctccgtccaaaa 41977875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 2226296 - 2226152
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||    |||||||||| ||||  || |||||| |||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 19987695 - 19987591
Alignment:
Q  128 aatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgat 227  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  19987695 aatttcgtccctgaattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgat 19987596  T
Q  228 gatgt 232  Q
    |||||    
T  19987595 gatgt 19987591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 21348723 - 21348870
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || ||||||| |||||||| ||||||||| | |||||||||||||||||||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtc 21348822  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||||||||||| ||||  || |||||| ||||| ||||    
T  21348823 catcaaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 38191895 - 38192014
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38191994  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  38191995 aatcaaatcagtccctccgt 38192014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 53187742 - 53187861
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53187841  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  53187842 aatcaaatcagtccctccgt 53187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 85 - 221
Target Start/End: Original strand, 54898437 - 54898573
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||||||||||||||||||||     
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 54898536  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    |||||||   ||| ||||||| ||||  |||||||||    
T  54898537 catcaaaatggtctctccgtccaaaagctccgttagt 54898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 46310525 - 46310406
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46310525 gactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46310426  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||| ||||||||||||    
T  46310425 aatcaaaccagtccctccgt 46310406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 46611392 - 46611273
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||||||||||  |  ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtc 46611293  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  46611292 aatcaaatcagtccctccgt 46611273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 51684610 - 51684757
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| |||||||||||||||||||||| ||||||| || || ||| |||||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagacgtc 51684709  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  51684710 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 174
Target Start/End: Complemental strand, 44795979 - 44795890
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaattt 44795890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 30600063 - 30599915
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||||||||||||||||||| |||||| | |||||||| || || ||||||||||||| ||||||||| | ||||||||||||||||| ||||||    
T  30600063 ggactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgt 30599964  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    | ||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  30599963 cgatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 17515310 - 17515457
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||| |||||||||||| |||||| ||| || ||| || ||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  17515310 gactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 17515409  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||||||| ||| |||||  |||||||| ||||||||||    
T  17515410 catcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 23293314 - 23293167
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||| || ||||||||| |||||||| || || |||| || |||||||| ||||||||| | ||||||| ||||||||||| |||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 46609149 - 46609264
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||   | | |||    
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 46609248  T
Q  185 catcaaatcagtccct 200  Q
     |||||||||||||||    
T  46609249 aatcaaatcagtccct 46609264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 53092623 - 53092742
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| |||||||||||   | | |||    
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtc 53092722  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  53092723 aatcaaatcagtccctccgt 53092742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 43765139 - 43765284
Alignment:
Q  87 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcca 186  Q
    ||||||||||||||||||||||||||||| |||||||||  || ||||| || ||||||| ||||||||| | |||||  ||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  187 tcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||   |||||||| || ||||  ||||||||| ||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 2661992 - 2661880
Alignment:
Q  90 atacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatca 189  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||| |||||||   | | ||| ||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatca 2661893  T
Q  190 aatcagtccctcc 202  Q
    |||||||||||||    
T  2661892 aatcagtccctcc 2661880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 28626411 - 28626530
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 28626510  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  28626511 aatcaaattagtccctccgt 28626530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 35903819 - 35903914
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||||||| | |||||||||||||||||||||||||    
T  35903819 aaaaacgactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaattt 35903914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 7883328 - 7883447
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||||||| ||||||  |||||||||||||||| |||||||||   | |  ||    
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttc 7883427  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  7883428 aatcaaatcagtccctccgt 7883447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 23291570 - 23291689
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||| ||||||||   | | |||    
T  23291570 gactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtc 23291669  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  23291670 aatcaaatcagtccctccgt 23291689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 35905843 - 35905712
Alignment:
Q  98 aattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtc 197  Q
    ||||| |||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||   |||    
T  35905843 aattcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtc 35905744  T
Q  198 cctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||| ||||  |||| |||| |||||||    
T  35905743 cctccgtccaaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 46112487 - 46112606
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||   |||||||| | ||||||| | ||||||| |||||||||||||||||    
T  46112487 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtc 46112586  T
Q  185 catcaaatcagtccctccgt 204  Q
    |||||||   ||||||||||    
T  46112587 catcaaaatggtccctccgt 46112606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 232
Target Start/End: Original strand, 42279510 - 42279654
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||| ||||||||| ||||||| ||  | |||||| | ||||||| | ||||||| | ||||||||||||||||||||||||| ||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtccctgaattttacagacgtctat 42279609  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||   ||||||||||| ||||  || |||||| ||||||||||    
T  42279610 caaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 611311 - 611192
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||||| | | |||| ||||||||||   | | |||    
T  611311 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaatgtc 611212  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  611211 aatcaaattagtccctccgt 611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 204
Target Start/End: Complemental strand, 2379071 - 2378953
Alignment:
Q  86 actaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtcc 185  Q
    |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| | ||||| | | ||||||| |||||||   | | |||     
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtca 2378972  T
Q  186 atcaaatcagtccctccgt 204  Q
    |||||||||||||||||||    
T  2378971 atcaaatcagtccctccgt 2378953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 229
Target Start/End: Original strand, 2377032 - 2377173
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||  ||||||||| |||||| | | || |||||||||||||||| | ||| ||  | |||||| |||||||||||||||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    ||||   || |||||||||||||  ||||||||| |||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 44267976 - 44268100
Alignment:
Q  80 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 179  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| || ||| || ||||||||| ||||||| | | || |||| |||||||   |     
T  44267976 aaaatgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaa 44268075  T
Q  180 acgtccatcaaatcagtccctccgt 204  Q
    | ||| |||||||||||||||||||    
T  44268076 atgtcaatcaaatcagtccctccgt 44268100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 23774162 - 23774268
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    ||||||||||||||||||||| |  | ||||| || ||||||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||  |    
T  23774162 tcaaattcgtccttgaattttcacgagtcggccaaattcgtccctcaattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaa 23774261  T
Q  195 gtccctc 201  Q
    |||||||    
T  23774262 gtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 30598337 - 30598456
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcgg-caaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| ||||||| | | || |||| |||||||   | | ||    
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattt-gtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgt 30598435  T
Q  184 ccatcaaatcagtccctccgt 204  Q
    | ||||||| |||||||||||    
T  30598436 caatcaaattagtccctccgt 30598456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 7884988 - 7884927
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 146  Q
    ||||||||||||||||||||||||||||||| |||||||||| || | ||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttt 7884927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 42282559 - 42282443
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||||||||||||| ||||||| |  || |||||  ||||||||| ||||||||| | ||||||| |||||||   | | || |||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttcat 42282460  T
Q  188 caaatcagtccctccgt 204  Q
     ||||||||||||||||    
T  42282459 taaatcagtccctccgt 42282443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 201
Target Start/End: Complemental strand, 51686483 - 51686367
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||| |||||| ||||||| || || ||||||||| |||||| ||||||||  | |||||||  ||||||   | | ||     
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgtt 51686384  T
Q  185 catcaaatcagtccctc 201  Q
    |||||||||||||||||    
T  51686383 catcaaatcagtccctc 51686367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 48829355 - 48829472
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||||||||||||||||||||||| |||| || || || ||  | |||||||||| ||||||||| | |||||||  | ||||   | | ||    
T  48829355 ggactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcctcggatttacaaaatgt 48829454  T
Q  184 ccatcaaatcagtccctc 201  Q
    ||||||||||||||||||    
T  48829455 ccatcaaatcagtccctc 48829472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  163 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 23888886 - 23888776
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||||||||| |||||||| | |  ||||| || ||||||||| |||| | ||||||||||  |||||||||||||||  || ||||||||||||       
T  23888886 tcaaattcgtccctgaattttcacacgtcggccaacttcgtccctcaattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaag 23888787  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  23888786 gtccctccgtc 23888776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 40509025 - 40508915
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    ||||||||||||||||||||| |    ||||| || ||||||||| |||| | ||||||||||| ||| ||| |||||||  |||||||||||||||       
T  40509025 tcaaattcgtccttgaattttcacgggtcggccaaattcgtccctcaattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaat 40508926  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  40508925 gtccctccgtc 40508915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 48633887 - 48633997
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    ||||||||||||||||||||| |    ||||  || ||||||| | |||| | ||||||||||| |||||||||||||||  |||||||||||||||       
T  48633887 tcaaattcgtccttgaattttcacgggtcggtcaaattcgtccatcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaag 48633986  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  48633987 gtccctccgtc 48633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 54412633 - 54412519
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    ||||| ||||||||||||| |||||||| |||||| ||  || ||||||| |||||||| ||| ||||| | ||||| |||||||||   | | ||| ||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaat 54412534  T
Q  188 caaatcagtccctcc 202  Q
    |||||||||||||||    
T  54412533 caaatcagtccctcc 54412519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 46197766 - 46197867
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 230  Q
    |||||| ||||||||| | ||||||| | ||||| |||||||||||||||||||||| |||   |||||| |||| ||||  |||||||||  |||||||    
T  46197766 ttcgtctctgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgat 46197865  T
Q  231 gt 232  Q
    ||    
T  46197866 gt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 2977443 - 2977347
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||||||||||||||||||| |  ||||||| || ||| ||||| |||| | ||||||||||| | ||||||| |||||  || ||||||||||||    
T  2977443 tcaaattcgtccttgaatttttacgaatcggccaaattcatcccttaattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaa 2977347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 25535317 - 25535253
Alignment:
Q  141 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||| |||||   ||||||||||    
T  25535317 aatttttcgaaatattaagttagtccctgaatttaacagacgtccaccaaattcatccctccgtc 25535253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 21350694 - 21350575
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||| ||| ||| ||||  ||||||||| || |||||  ||||||||| ||||||| | | || |||| |||||||   | | |||    
T  21350694 gactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 21350595  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  21350594 aatcaaatcagtccctccgt 21350575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 23877044 - 23876982
Alignment:
Q  143 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||||||   ||||||||||    
T  23877044 ttttttgaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtc 23876982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 45898462 - 45898352
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||||||||||| |||||||| | |  ||| | || || ||||||||||| | ||||||||||| ||||||| |||||||  |||||||| ||||||       
T  45898462 tcaaattcgtccctgaattttcacacgtcgaccaactttgtccctgaattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaag 45898363  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  45898362 gtccctccgtc 45898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 17517052 - 17516943
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    ||||||||||||||||||||| |||||||||  || ||||| | |||||||| |||||||   | || |||| |||||||   | | ||| |||||||||    
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatca 17516953  T
Q  195 gtccctccgt 204  Q
    ||||||||||    
T  17516952 gtccctccgt 17516943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 232
Target Start/End: Complemental strand, 48830896 - 48830803
Alignment:
Q  139 tgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||  ||||||||| | ||||||  |||||||||| |||||||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  48830896 tgaatttaacgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 165
Target Start/End: Original strand, 600725 - 600805
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtc 165  Q
    |||||||||||||||||| |||||||||||| |||||||| | || || || | |||||||| | ||||||| | ||||||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 44276265 - 44276193
Alignment:
Q  160 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||| ||||||||||||||| ||||||||   ||||||||||| ||||  || |||||| ||||||||||    
T  44276265 ttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 46114195 - 46114075
Alignment:
Q  85 gactaatacctcaaattcgtccttgaatttt-gaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||| |||||||||||  ||||||||||||  |||||||||| || || |||| |||||||| ||||||||| | ||||||  |||||||   | | ||    
T  46114195 gactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaatttacaaaatgt 46114096  T
Q  184 ccatcaaatcagtccctccgt 204  Q
    | |||||||||||| ||||||    
T  46114095 caatcaaatcagtcactccgt 46114075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 33113254 - 33113184
Alignment:
Q  135 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    ||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  33113254 tccctcaattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 175
Target Start/End: Original strand, 41944586 - 41944666
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttt 175  Q
    |||| ||||||| |||||||| |   |||||| || ||||||||  |||||  |||||||||||| |||||||||||||||    
T  41944586 tcaatttcgtccctgaattttcagggatcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttt 41944666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 6786125 - 6785978
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||||||||||||||||||||    
T  6786125 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtcccttaattatttgaaatatcaaattagtccctgaattttacagacgtc 6786026  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||||||||||| |||||||| ||||  |||||||||||    
T  6786025 catcaaatcagtccctccgtccaaaatgtctgttaacagtgatgatgt 6785978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 37020508 - 37020655
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||  ||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  37020508 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaattttgtccttgaattttttgaaatatcaaattagtccctgaattttgcagacgtc 37020607  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  37020608 catcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgt 37020655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 85 - 210
Target Start/End: Complemental strand, 24208186 - 24208061
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24208186 gactaatacctcaaaatactccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaattttacagacgtc 24208087  T
Q  185 catcaaatcagtccctccgtctaaaa 210  Q
    ||||||||||||||||||||| ||||    
T  24208086 catcaaatcagtccctccgtccaaaa 24208061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 79 - 232
Target Start/End: Complemental strand, 39664898 - 39664745
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 178  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||| || |||||||| ||||||| ||||||||| | |||||||||||||||||||    
T  39664898 aaaaatgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttaca 39664799  T
Q  179 gacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||||||||   ||||||||||| ||||  ||||||||| ||||||||||    
T  39664798 gacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 221
Target Start/End: Original strand, 16763076 - 16763212
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 16763175  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    |||||||   ||||||||||| ||||| || ||||||    
T  16763176 catcaaaatggtccctccgtccaaaatctctgttagt 16763212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 24205593 - 24205717
Alignment:
Q  80 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 179  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||   |     
T  24205593 aaaaggactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaa 24205692  T
Q  180 acgtccatcaaatcagtccctccgt 204  Q
    | ||| ||||||| |||||||||||    
T  24205693 atgtcaatcaaattagtccctccgt 24205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 14387349 - 14387468
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  14387349 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtc 14387448  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  14387449 aatcaaataagtccctccgt 14387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 40560223 - 40560370
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||| ||||||||||| ||||||||| ||||||| || || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  40560223 gactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 40560322  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||  |||||||||||| ||||  || |||||| ||||||||||    
T  40560323 catcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 14389228 - 14389081
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||||| | |||||||||||||||| || | |||    
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||||||||||| ||||  | ||||||||||||||||||    
T  14389128 catcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 16764700 - 16764581
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||   | | |||    
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 16764601  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||| ||||||||||||    
T  16764600 aatcaaaccagtccctccgt 16764581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 85 - 230
Target Start/End: Complemental strand, 44709889 - 44709744
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||||||||||||| ||||| |||| || |||| ||||||||||| ||||||| | | |||||||||||||||||||||||||    
T  44709889 gactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacgtc 44709790  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgat 230  Q
    |||||||   ||||||||||| ||||  | ||||||| ||||||||    
T  44709789 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 37022274 - 37022155
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 37022175  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  37022174 aatcaaattagtccctccgt 37022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 2577575 - 2577450
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 178  Q
    ||||| ||||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||   |    
T  2577575 aaaaatgactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaa 2577476  T
Q  179 gacgtccatcaaatcagtccctccgt 204  Q
     | ||| ||||||| |||||||||||    
T  2577475 aatgtcaatcaaattagtccctccgt 2577450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 19908391 - 19908246
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaa-tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| || || ||||||||||||| ||||||||| | ||||||| ||||||||||||||||    
T  19908391 gactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 19908292  T
Q  184 ccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    || |||||   ||||||||||| ||||  ||||||||| |||||||    
T  19908291 ccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 232
Target Start/End: Original strand, 2766929 - 2767081
Alignment:
Q  80 aaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacag 179  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||  ||  |||||| |||||||| ||||||||| | ||||||||||||||||||||    
T  2766929 aaaatgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacag 2767028  T
Q  180 acgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||| ||||||   ||||||| ||| ||||  ||||||||| ||||||||||    
T  2767029 acgtctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 232
Target Start/End: Original strand, 17696209 - 17696353
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||||||||||||||||||||||| |||||||||| || ||| ||||||||||||   ||||||| | ||||||||||||||||||| ||||| ||    
T  17696209 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttacaaacgtcaat 17696308  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||   ||| ||||||| ||||  ||||||||| ||||||||||    
T  17696309 caaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 40561967 - 40561848
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||  |||||| |||||||||||||||||||   | | |||    
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtc 40561868  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||| ||||||||||    
T  40561867 aatcaaatcggtccctccgt 40561848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 6783364 - 6783453
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattt 174  Q
    ||||||||||||||| | ||||||||||||| |||||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaattt 6783453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  89 aatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttt-cgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    ||||||||||||||||||||||||||| |||||| |   || || |||| ||||||||| | ||||||| | ||||||||||||||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    ||||   |||||||| || ||||  ||||||||| ||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 84 - 204
Target Start/End: Original strand, 39663153 - 39663273
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||| ||||||||||||||||||| |||||||||  || |||||||||||||||| | ||||| | | |||||||||||||||   | | ||    
T  39663153 ggactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgt 39663252  T
Q  184 ccatcaaatcagtccctccgt 204  Q
    | |||||||||||||||||||    
T  39663253 caatcaaatcagtccctccgt 39663273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 16376736 - 16376855
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||||||||| ||||||||| |||||||||  || |||||||||||||||| ||||||| | | |||||||||||||||   | |  ||    
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatc 16376835  T
Q  185 catcaaatcagtccctccgt 204  Q
     |||||||||||||||||||    
T  16376836 aatcaaatcagtccctccgt 16376855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 197
Target Start/End: Original strand, 19581414 - 19581526
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||||||||||||||||||| |||||| ||||||| || || || ||||||||||||| ||||||||| | |||||||  ||||||  || | |||    
T  19581414 gactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaatgtc 19581513  T
Q  185 catcaaatcagtc 197  Q
    |||||||||||||    
T  19581514 catcaaatcagtc 19581526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 19906685 - 19906801
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    |||||||| ||||||||||||||||||| |||||||||  || |||||||||||||||| ||||||||| | ||||||||  |||||   | | ||| ||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaat 19906784  T
Q  188 caaatcagtccctccgt 204  Q
    |||||||||||||||||    
T  19906785 caaatcagtccctccgt 19906801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 191
Target Start/End: Original strand, 6797506 - 6797613
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgt 183  Q
    |||||||||||| |||||| |  ||||||||| |||||| ||| || ||||| |||||||||| ||||||||| | ||||||||| ||||||||||||||    
T  6797506 ggactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgt 6797605  T
Q  184 ccatcaaa 191  Q
    | ||||||    
T  6797606 ctatcaaa 6797613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 39455169 - 39455316
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    |||||||| |||||||| ||||||||||||| |||||||||  || |||   |||||||||| | ||||||| | ||||||| |||||||||||||||||    
T  39455169 gactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgtc 39455268  T
Q  185 catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 232  Q
    |||||||   ||| ||||||  ||||  ||||||||| | ||||||||    
T  39455269 catcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 34400313 - 34400383
Alignment:
Q  84 ggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaata 154  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || ||| |||||||||||| |||||||    
T  34400313 ggactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaata 34400383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 16377292 - 16377197
Alignment:
Q  134 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    ||||||||||||| | ||||||| | ||||||| ||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  16377292 gtccctgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 39456875 - 39456750
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 178  Q
    ||||| ||||||||| |||||||| |||||||||||| |||||| ||  || ||||||| |||||||| | ||||| | | |||||||||||||||   |    
T  39456875 aaaaacgactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatttataa 39456776  T
Q  179 gacgtccatcaaatcagtccctccgt 204  Q
     | ||| ||||||||||||| |||||    
T  39456775 aatgtcaatcaaatcagtccatccgt 39456750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 11023100 - 11023001
Alignment:
Q  122 tcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 221  Q
    ||||| || ||||||||  |||||  |||||||||||| ||||||||||||||    |||||||||||| || ||||||||||| |||| ||||||||||    
T  11023100 tcggccaaattcgtcccccaatttaacgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgttagt 11023001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 42517558 - 42517599
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggc 126  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  42517558 gactaatacctcaaattcgtccttgaatttttaaaaatcggc 42517599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 37417287 - 37417379
Alignment:
Q  99 attcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||||||||||||||| |    ||||| || ||| ||||| |||| | ||||||||||| |||||||||||||||  |||||||||||||||    
T  37417287 attcgtccttgaattttcatgggtcggccaaattcatccctcaattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 37417379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 6799494 - 6799436
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttt 146  Q
    ||||| |||||||||||||||||||||| |||||||||  || ||||||| ||||||||    
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaatttt 6799436  T

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Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 205
Target Start/End: Complemental strand, 11315449 - 11315339
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||| ||||||||| |||||| |  ||||||| || ||||| ||  |||||  |||||||||||| |||| |||||||||  |||||||||||||||       
T  11315449 tcaacttcgtccttaaatttttatgaatcggccaaattcgttccctaatttaacgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatg 11315350  T
Q  195 gtccctccgtc 205  Q
    |||||||||||    
T  11315349 gtccctccgtc 11315339  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 26584895 - 26584821
Alignment:
Q  131 ttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    ||||||||| || ||||| ||||||||||||| ||||| ||||| | |||||||||||||||   ||||||||||    
T  26584895 ttcgtccctcaagttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtc 26584821  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 4046352 - 4046403
Alignment:
Q  141 aatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 192  Q
    ||||||| ||||||||||||||||| || ||||| |||| ||||||||||||    
T  4046352 aattttttgaaatatcaaattagtctctaaatttaacagtcgtccatcaaat 4046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 29909735 - 29909664
Alignment:
Q  134 gtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 205  Q
    |||||| |||| | ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  29909735 gtccctcaattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtc 29909664  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 201
Target Start/End: Original strand, 361455 - 361561
Alignment:
Q  95 tcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatca 194  Q
    |||| |||||||||||||||| |  ||||||| ||  || ||||| |||| |  |||||||||||||||||  ||||||   |||||||||||||| | |    
T  361455 tcaacttcgtccttgaattttcatgaatcggccaaaatcatccctcaattatgtgaaatatcaaattagtcattgaattcgtcagacgtccatcaattta 361554  T
Q  195 gtccctc 201  Q
    |||||||    
T  361555 gtccctc 361561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 37645490 - 37645607
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    ||||||| ||| |||||||||||||||| ||||||| |   | ||||||| | ||||||  |||||||| | ||||||| |||||||| |||| ||  ||    
T  37645490 taataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattttgcagatgtttat 37645589  T
Q  188 caaatcagtccctccgtc 205  Q
    ||||   |||||||||||    
T  37645590 caaaattgtccctccgtc 37645607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 15432378 - 15432434
Alignment:
Q  135 tccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 191  Q
    ||||| |||| | ||||||||||| |||||| ||||||||  |||||||||||||||    
T  15432378 tccctcaattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaa 15432434  T

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Target: scaffold1712 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 982 - 1101
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||   | | |||    
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 1081  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  1082 aatcaaattagtccctccgt 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 54347 - 54228
Alignment:
Q  85 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtc 184  Q
    ||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||   | | |||    
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 54248  T
Q  185 catcaaatcagtccctccgt 204  Q
     ||||||| |||||||||||    
T  54247 aatcaaattagtccctccgt 54228  T

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Target: scaffold1454 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 88 - 229
Target Start/End: Original strand, 1266 - 1407
Alignment:
Q  88 taatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttacagacgtccat 187  Q
    ||||||||||||| |||||||||||||| |||||| ||  || ||||||| ||||||||  |||||||| | ||||||||||||||||||||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  188 caaatcagtccctccgtctaaaatgtccgttagtagtgatga 229  Q
    ||||   ||||||||||| ||||  ||||||||| |||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 1650 - 1525
Alignment:
Q  79 aaaaaggactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattttaca 178  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||   ||||| ||| |||||||||||||||   |    
T  1650 aaaaaagactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaa 1551  T
Q  179 gacgtccatcaaatcagtccctccgt 204  Q
     | |||  ||||||||||||||||||    
T  1550 aatgtcattcaaatcagtccctccgt 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 8264 - 8353
Alignment:
Q  87 ctaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttta 176  Q
    ||||||||||||||||||||||||||||| |||||| ||| || ||||| | |||||||| | ||||||| | |||||||||||||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaatttta 8353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 436272 - 436336
Alignment:
Q  92 acctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaatttttcgaaatatc 156  Q
    ||||||||||||| |||||||||| ||||||| || || ||| ||| | |||||| |||||||||    
T  436272 acctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatc 436336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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