View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0113_high_8 (Length: 290)
Name: NF0113_high_8
Description: NF0113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0113_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 49087575 - 49087368
Alignment:
| Q |
1 |
tgaagccatagatggcagcaccgacaaccgtgaagtggggtttgtgtggacggtagacaagccagagaacaagtagagtgacaccgattagtaggagaaa |
100 |
Q |
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| T |
49087575 |
tgaagccatagatggcagcaccgacaaccgtgaagtggggtttgtgtggacggtagacaagccagagaacaagtagagtgacaccgattagtaggagaaa |
49087476 |
T |
|
| Q |
101 |
gatggtgaggaatgtggcaaaagcacgtccggaagaacttgtgccgtaggaagaagaaggtggtggaccagcaggtttgttcatttgtagtttgtcaggg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
49087475 |
gatggtgaggaatgtggcaaaagcacgtccggaagaacttgtgccgtaggaagaagaaggtggtggaccagcaggtttgttcatttgtagtttgtcaggg |
49087376 |
T |
|
| Q |
201 |
gggagatg |
208 |
Q |
| |
|
|||||||| |
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|
| T |
49087375 |
gggagatg |
49087368 |
T |
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