View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0113_low_1 (Length: 882)

Name: NF0113_low_1
Description: NF0113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0113_low_1
NF0113_low_1
[»] chr2 (44 HSPs)
chr2 (65-810)||(10840086-10840832)
chr2 (473-597)||(6846798-6846922)
chr2 (485-605)||(2940961-2941082)
chr2 (483-562)||(10841701-10841780)
chr2 (485-606)||(11689567-11689688)
chr2 (485-606)||(11721371-11721492)
chr2 (549-605)||(15848178-15848234)
chr2 (549-605)||(37895629-37895685)
chr2 (483-605)||(6848016-6848138)
chr2 (549-605)||(36382251-36382307)
chr2 (549-605)||(39423605-39423661)
chr2 (549-605)||(44714043-44714099)
chr2 (549-607)||(6577557-6577615)
chr2 (835-876)||(10840832-10840873)
chr2 (483-596)||(16099079-16099192)
chr2 (549-605)||(2318248-2318304)
chr2 (544-604)||(3653363-3653423)
chr2 (549-605)||(10712813-10712869)
chr2 (549-605)||(36479808-36479864)
chr2 (549-605)||(36755183-36755239)
chr2 (549-596)||(6657968-6658015)
chr2 (483-598)||(11349494-11349609)
chr2 (549-596)||(39498400-39498447)
chr2 (550-596)||(14900743-14900789)
chr2 (550-596)||(33739794-33739840)
chr2 (549-594)||(11163316-11163361)
chr2 (522-599)||(25623351-25623428)
chr2 (485-588)||(16105578-16105681)
chr2 (544-591)||(17266483-17266530)
chr2 (550-596)||(13995933-13995979)
chr2 (549-607)||(25892484-25892542)
chr2 (550-596)||(33062310-33062356)
chr2 (550-596)||(41248819-41248865)
chr2 (544-605)||(11347508-11347569)
chr2 (550-599)||(44045290-44045339)
chr2 (544-604)||(25231131-25231191)
chr2 (549-605)||(34447903-34447958)
chr2 (550-605)||(15848370-15848425)
chr2 (550-605)||(34448077-34448132)
chr2 (550-596)||(1696000-1696046)
chr2 (545-595)||(25624397-25624447)
chr2 (549-607)||(25893498-25893556)
chr2 (550-607)||(44044205-44044262)
chr2 (549-594)||(45556202-45556247)
[»] chr4 (57 HSPs)
chr4 (692-799)||(32063472-32063575)
chr4 (485-604)||(52298269-52298388)
chr4 (483-600)||(41583518-41583635)
chr4 (549-605)||(14801826-14801882)
chr4 (549-605)||(34765662-34765718)
chr4 (516-606)||(7280387-7280477)
chr4 (544-602)||(52298111-52298169)
chr4 (550-607)||(16605693-16605750)
chr4 (483-600)||(40387491-40387608)
chr4 (542-607)||(48529856-48529921)
chr4 (549-605)||(24411448-24411504)
chr4 (549-605)||(35028280-35028336)
chr4 (489-605)||(41582477-41582593)
chr4 (549-605)||(53701902-53701958)
chr4 (550-604)||(24349765-24349819)
chr4 (522-599)||(23455649-23455726)
chr4 (549-605)||(15507955-15508011)
chr4 (553-605)||(17356204-17356256)
chr4 (549-605)||(37976435-37976491)
chr4 (548-596)||(43155787-43155835)
chr4 (549-605)||(52909343-52909399)
chr4 (483-606)||(11857916-11858039)
chr4 (549-596)||(13058127-13058174)
chr4 (549-596)||(23613399-23613446)
chr4 (549-596)||(36009104-36009151)
chr4 (549-596)||(49879467-49879514)
chr4 (550-596)||(4982986-4983032)
chr4 (550-596)||(9145026-9145072)
chr4 (550-596)||(27934623-27934669)
chr4 (550-596)||(42738291-42738337)
chr4 (549-595)||(44967330-44967376)
chr4 (549-599)||(55867402-55867452)
chr4 (557-605)||(53129788-53129836)
chr4 (549-596)||(5369037-5369084)
chr4 (549-596)||(18831439-18831486)
chr4 (549-596)||(24711201-24711248)
chr4 (544-607)||(48528557-48528620)
chr4 (549-596)||(50418928-50418975)
chr4 (550-601)||(56014816-56014867)
chr4 (550-596)||(9400779-9400825)
chr4 (550-604)||(10781767-10781821)
chr4 (550-596)||(22566890-22566936)
chr4 (550-596)||(32950233-32950279)
chr4 (550-596)||(33247533-33247579)
chr4 (550-596)||(34837334-34837380)
chr4 (550-604)||(54434280-54434334)
chr4 (544-605)||(30642428-30642489)
chr4 (544-605)||(40388388-40388449)
chr4 (549-605)||(35508522-35508578)
chr4 (549-593)||(37248326-37248370)
chr4 (549-605)||(54086977-54087033)
chr4 (551-607)||(54435377-54435433)
chr4 (550-605)||(8439506-8439561)
chr4 (550-605)||(46661196-46661251)
chr4 (550-601)||(56015933-56015984)
chr4 (549-591)||(16005928-16005970)
chr4 (550-596)||(38012261-38012307)
[»] chr3 (43 HSPs)
chr3 (692-801)||(6956438-6956543)
chr3 (521-606)||(30380908-30380993)
chr3 (548-605)||(33689661-33689718)
chr3 (473-595)||(14634044-14634166)
chr3 (544-606)||(20704608-20704670)
chr3 (549-607)||(33156274-33156332)
chr3 (549-605)||(23458261-23458317)
chr3 (549-605)||(26463880-26463936)
chr3 (549-605)||(40758234-40758290)
chr3 (550-605)||(9367832-9367887)
chr3 (549-600)||(51994173-51994224)
chr3 (483-601)||(20704454-20704572)
chr3 (522-599)||(32717065-32717142)
chr3 (544-605)||(41988047-41988108)
chr3 (549-605)||(9294240-9294296)
chr3 (544-604)||(39399375-39399435)
chr3 (544-604)||(54317914-54317974)
chr3 (549-596)||(2796269-2796316)
chr3 (550-596)||(8041707-8041753)
chr3 (550-596)||(10770751-10770797)
chr3 (545-599)||(29192121-29192175)
chr3 (550-596)||(36314558-36314604)
chr3 (550-596)||(48322637-48322683)
chr3 (550-596)||(54466514-54466560)
chr3 (549-605)||(43384373-43384429)
chr3 (544-600)||(44654790-44654846)
chr3 (549-596)||(19741183-19741230)
chr3 (490-605)||(40506069-40506184)
chr3 (482-599)||(21783783-21783900)
chr3 (544-605)||(42854520-42854579)
chr3 (550-599)||(25107304-25107353)
chr3 (550-607)||(25108375-25108432)
chr3 (549-594)||(46474905-46474950)
chr3 (549-605)||(53756834-53756890)
chr3 (532-599)||(2943986-2944053)
chr3 (544-606)||(4521762-4521825)
chr3 (550-605)||(23458070-23458125)
chr3 (550-605)||(46475063-46475118)
chr3 (549-596)||(55052539-55052586)
chr3 (550-604)||(21185978-21186032)
chr3 (545-599)||(32716335-32716389)
chr3 (549-591)||(40033752-40033794)
chr3 (763-801)||(43608646-43608684)
[»] chr1 (60 HSPs)
chr1 (483-605)||(27999133-27999254)
chr1 (483-606)||(42267327-42267450)
chr1 (549-605)||(4960630-4960686)
chr1 (549-605)||(17662132-17662188)
chr1 (473-607)||(34850345-34850479)
chr1 (485-606)||(22103787-22103908)
chr1 (549-605)||(6367652-6367708)
chr1 (543-606)||(21444678-21444741)
chr1 (473-600)||(34849025-34849152)
chr1 (549-603)||(40210654-40210708)
chr1 (549-605)||(13914349-13914405)
chr1 (533-605)||(16970817-16970889)
chr1 (549-605)||(24009823-24009879)
chr1 (549-605)||(42248563-42248619)
chr1 (544-595)||(10304008-10304059)
chr1 (483-606)||(13245874-13245997)
chr1 (477-596)||(25647902-25648021)
chr1 (550-605)||(37578474-37578529)
chr1 (548-605)||(19017911-19017968)
chr1 (548-596)||(183482-183530)
chr1 (549-605)||(1103551-1103607)
chr1 (549-605)||(1841549-1841605)
chr1 (549-605)||(14879061-14879117)
chr1 (549-605)||(30711417-30711473)
chr1 (549-605)||(32917350-32917406)
chr1 (549-605)||(34464731-34464787)
chr1 (549-605)||(43758912-43758968)
chr1 (544-595)||(10304147-10304198)
chr1 (550-596)||(24905427-24905473)
chr1 (550-596)||(28011454-28011500)
chr1 (550-596)||(31514577-31514623)
chr1 (550-596)||(33442854-33442900)
chr1 (473-602)||(9443586-9443715)
chr1 (549-605)||(35152433-35152489)
chr1 (548-596)||(47999383-47999431)
chr1 (549-596)||(26024513-26024560)
chr1 (550-596)||(4716728-4716774)
chr1 (545-599)||(13295221-13295275)
chr1 (545-603)||(25065019-25065077)
chr1 (545-607)||(25065910-25065972)
chr1 (549-607)||(44523416-44523474)
chr1 (550-596)||(52134159-52134205)
chr1 (549-594)||(19515909-19515954)
chr1 (485-606)||(32927284-32927405)
chr1 (549-594)||(36694541-36694586)
chr1 (549-594)||(36710642-36710687)
chr1 (549-594)||(40772597-40772642)
chr1 (477-597)||(40435363-40435483)
chr1 (549-605)||(41098823-41098879)
chr1 (549-605)||(46163120-46163176)
chr1 (553-601)||(48691242-48691290)
chr1 (549-605)||(48779207-48779263)
chr1 (550-605)||(1841741-1841796)
chr1 (550-605)||(6367844-6367899)
chr1 (550-605)||(14879253-14879308)
chr1 (551-606)||(31197152-31197207)
chr1 (550-605)||(48779401-48779456)
chr1 (544-606)||(19227047-19227109)
chr1 (552-594)||(23209620-23209662)
chr1 (550-599)||(42534303-42534352)
[»] chr6 (28 HSPs)
chr6 (483-606)||(1215147-1215270)
chr6 (549-605)||(12080726-12080782)
chr6 (549-605)||(21627995-21628051)
chr6 (549-605)||(33517624-33517680)
chr6 (483-606)||(26463203-26463326)
chr6 (483-604)||(10782433-10782553)
chr6 (548-605)||(33647052-33647109)
chr6 (549-605)||(30725849-30725905)
chr6 (549-605)||(30803951-30804007)
chr6 (549-604)||(3059347-3059402)
chr6 (550-596)||(28000645-28000691)
chr6 (550-596)||(30337540-30337586)
chr6 (549-596)||(17734454-17734501)
chr6 (543-606)||(33648746-33648809)
chr6 (550-596)||(363090-363136)
chr6 (550-596)||(14196875-14196921)
chr6 (544-605)||(24210616-24210677)
chr6 (549-605)||(11392928-11392984)
chr6 (824-875)||(34535591-34535640)
chr6 (550-605)||(11434893-11434948)
chr6 (550-605)||(21627804-21627859)
chr6 (550-596)||(25486188-25486232)
chr6 (544-607)||(28498305-28498368)
chr6 (544-607)||(29810716-29810779)
chr6 (550-605)||(30726041-30726096)
chr6 (550-605)||(30804143-30804198)
chr6 (550-605)||(33517816-33517871)
chr6 (550-599)||(11435957-11436006)
[»] scaffold0031 (1 HSPs)
scaffold0031 (549-605)||(69055-69111)
[»] scaffold0005 (1 HSPs)
scaffold0005 (549-605)||(37845-37901)
[»] chr8 (41 HSPs)
chr8 (549-605)||(4405942-4405998)
chr8 (549-605)||(16388808-16388864)
chr8 (549-605)||(36928566-36928622)
chr8 (483-606)||(22890275-22890398)
chr8 (551-605)||(31608795-31608849)
chr8 (549-605)||(13186150-13186206)
chr8 (549-605)||(35756672-35756728)
chr8 (549-605)||(39071766-39071822)
chr8 (483-605)||(31873181-31873303)
chr8 (549-593)||(12273147-12273191)
chr8 (549-596)||(1425313-1425360)
chr8 (549-596)||(23663805-23663852)
chr8 (550-596)||(3041716-3041762)
chr8 (544-606)||(24085859-24085921)
chr8 (550-596)||(36325325-36325371)
chr8 (550-596)||(38845559-38845605)
chr8 (549-595)||(38862708-38862754)
chr8 (550-596)||(40775910-40775956)
chr8 (550-596)||(44407117-44407163)
chr8 (485-606)||(20050109-20050234)
chr8 (549-605)||(36186349-36186405)
chr8 (549-605)||(40318246-40318302)
chr8 (549-596)||(8316879-8316926)
chr8 (549-596)||(22915649-22915696)
chr8 (549-596)||(23698535-23698582)
chr8 (550-596)||(2266583-2266629)
chr8 (549-595)||(2534785-2534831)
chr8 (550-596)||(11674786-11674831)
chr8 (550-595)||(12199211-12199256)
chr8 (550-595)||(12443639-12443684)
chr8 (550-594)||(35449871-35449915)
chr8 (550-605)||(8747546-8747601)
chr8 (543-606)||(11291192-11291255)
chr8 (550-605)||(23663636-23663691)
chr8 (532-599)||(34213837-34213904)
chr8 (550-605)||(36928758-36928813)
chr8 (544-602)||(2693802-2693860)
chr8 (544-602)||(9499883-9499940)
chr8 (549-595)||(38955793-38955839)
chr8 (745-801)||(1231854-1231911)
chr8 (550-607)||(20385659-20385716)
[»] chr5 (53 HSPs)
chr5 (549-605)||(32242332-32242388)
chr5 (491-600)||(15644999-15645108)
chr5 (549-605)||(5993979-5994035)
chr5 (485-605)||(12904780-12904900)
chr5 (549-605)||(35512238-35512294)
chr5 (473-587)||(5326071-5326185)
chr5 (549-605)||(5024300-5024356)
chr5 (549-605)||(11047527-11047583)
chr5 (549-605)||(13962954-13963010)
chr5 (549-605)||(14194705-14194761)
chr5 (549-605)||(19892590-19892646)
chr5 (549-605)||(20840623-20840679)
chr5 (549-605)||(29646644-29646700)
chr5 (549-605)||(38442158-38442214)
chr5 (549-605)||(39453390-39453446)
chr5 (549-596)||(3529133-3529180)
chr5 (549-600)||(24547412-24547463)
chr5 (550-596)||(297274-297320)
chr5 (550-596)||(6758125-6758171)
chr5 (544-602)||(14848992-14849050)
chr5 (549-595)||(38475291-38475337)
chr5 (550-596)||(41930607-41930653)
chr5 (548-605)||(18247173-18247230)
chr5 (522-599)||(20856995-20857072)
chr5 (522-599)||(22869668-22869745)
chr5 (522-599)||(22870422-22870499)
chr5 (549-594)||(28269681-28269726)
chr5 (549-594)||(28771131-28771176)
chr5 (549-605)||(186509-186565)
chr5 (549-605)||(8322494-8322550)
chr5 (549-605)||(16157137-16157193)
chr5 (549-605)||(17202489-17202545)
chr5 (549-605)||(20814417-20814473)
chr5 (550-594)||(31482664-31482708)
chr5 (549-596)||(27587238-27587285)
chr5 (550-596)||(1506058-1506104)
chr5 (549-591)||(35920480-35920522)
chr5 (549-594)||(6150544-6150589)
chr5 (522-595)||(20857511-20857584)
chr5 (549-605)||(13362510-13362566)
chr5 (550-605)||(6150702-6150757)
chr5 (550-605)||(11047719-11047774)
chr5 (549-596)||(11761839-11761886)
chr5 (550-605)||(16156946-16157001)
chr5 (550-605)||(20814226-20814281)
chr5 (550-605)||(28269513-28269568)
chr5 (550-605)||(39453581-39453636)
chr5 (550-605)||(43159096-43159151)
chr5 (483-589)||(14848763-14848869)
chr5 (549-595)||(16083067-16083113)
chr5 (559-605)||(27937301-27937347)
chr5 (549-594)||(18670289-18670334)
chr5 (745-801)||(21978411-21978468)
[»] chr7 (49 HSPs)
chr7 (484-595)||(13311325-13311436)
chr7 (533-607)||(11397452-11397526)
chr7 (483-604)||(20563758-20563879)
chr7 (549-605)||(3914228-3914284)
chr7 (483-595)||(11400261-11400372)
chr7 (549-605)||(28469290-28469346)
chr7 (549-605)||(32053425-32053481)
chr7 (549-605)||(40379859-40379915)
chr7 (549-605)||(42731509-42731565)
chr7 (549-607)||(5457187-5457245)
chr7 (483-597)||(15714582-15714696)
chr7 (549-599)||(27396883-27396933)
chr7 (549-605)||(10935884-10935940)
chr7 (549-605)||(45010688-45010744)
chr7 (549-596)||(17102110-17102157)
chr7 (549-596)||(27991829-27991876)
chr7 (483-597)||(7354886-7355000)
chr7 (545-599)||(12644093-12644147)
chr7 (550-596)||(30948420-30948466)
chr7 (550-596)||(32680855-32680901)
chr7 (549-599)||(43124440-43124490)
chr7 (545-599)||(45914610-45914664)
chr7 (522-599)||(4226188-4226265)
chr7 (522-599)||(12643163-12643240)
chr7 (549-598)||(45010893-45010942)
chr7 (549-605)||(2640460-2640516)
chr7 (549-605)||(23181276-23181332)
chr7 (549-605)||(24388909-24388965)
chr7 (545-605)||(38643636-38643696)
chr7 (549-596)||(32298996-32299043)
chr7 (550-596)||(34928910-34928956)
chr7 (550-596)||(39686794-39686840)
chr7 (545-607)||(45915760-45915822)
chr7 (550-599)||(17886778-17886827)
chr7 (549-594)||(22871570-22871615)
chr7 (556-605)||(37656949-37656998)
chr7 (522-599)||(47558093-47558170)
chr7 (544-600)||(20426617-20426673)
chr7 (483-599)||(32688506-32688622)
chr7 (549-605)||(42019879-42019935)
chr7 (550-605)||(2640269-2640324)
chr7 (549-596)||(6253561-6253608)
chr7 (549-596)||(6571103-6571150)
chr7 (550-605)||(17885719-17885774)
chr7 (549-596)||(19204579-19204626)
chr7 (550-605)||(42731701-42731756)
chr7 (473-607)||(18670143-18670277)
chr7 (544-605)||(12229354-12229415)
chr7 (483-600)||(18855434-18855551)
[»] scaffold0347 (2 HSPs)
scaffold0347 (522-603)||(13672-13753)
scaffold0347 (522-607)||(14545-14630)
[»] scaffold0007 (1 HSPs)
scaffold0007 (549-596)||(1859-1906)
[»] scaffold0559 (1 HSPs)
scaffold0559 (550-596)||(1324-1370)
[»] scaffold0024 (1 HSPs)
scaffold0024 (550-596)||(141854-141900)
[»] scaffold0020 (1 HSPs)
scaffold0020 (550-596)||(139763-139809)
[»] scaffold0295 (1 HSPs)
scaffold0295 (548-605)||(2232-2289)
[»] scaffold0205 (1 HSPs)
scaffold0205 (550-596)||(21229-21275)
[»] scaffold0181 (1 HSPs)
scaffold0181 (546-606)||(9294-9353)
[»] scaffold0008 (1 HSPs)
scaffold0008 (544-607)||(239831-239894)
[»] scaffold0100 (1 HSPs)
scaffold0100 (485-575)||(31218-31308)
[»] scaffold0027 (1 HSPs)
scaffold0027 (544-602)||(14076-14133)
[»] scaffold0220 (1 HSPs)
scaffold0220 (544-605)||(23316-23377)


Alignment Details
Target: chr2 (Bit Score: 584; Significance: 0; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 584; E-Value: 0
Query Start/End: Original strand, 65 - 810
Target Start/End: Original strand, 10840086 - 10840832
Alignment:
Q  65 ccttcttggtcgactcaaggctagacagtgactgaggcaagcagaagacatcttgatgttgacatatatgagtaatatggtgtacatattacaagtccca 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10840086 ccttcttggtcgactcaaggctagacagtgactgaggcaagcagaagacatcttgatgttgacatatatgagtaatatggtgtacatattacaagtccca 10840185  T
Q  165 aattctccataatactttcattttgaatcctatcttgtatgatacgacaactcatctttcataacttttttgcatatacaactctaggtttctccctnnn 264  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||       
T  10840186 aattctccttaatactttcattttgaatcctatcttgtatgatatgacaactcatctttcataacctttttgcatatacaactctaggtttctccctaaa 10840285  T
Q  265 nnnnnnnnnnnnctctaggtttactttttcgttgcatcttccaaaagactttgtttcgtcagtctcatacaacattgtacgtattacaattgtgtagaaa 364  Q
                |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10840286 aaaaaaaa----ctctaggtttactttttcgttgcatcttccaaaagattttgtttcgttagtctcatacaacattgtacgtattacaattgtgtagaaa 10840381  T
Q  365 tattgacttttatcnnnnnnnnnnncacaagtacaactcctttaaacttgagtttcttgagttttgactggtactttttcatcacgtcttttaaacttga 464  Q
    ||||||||||||||           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  10840382 tattgacttttatctttctttttttcacaagtacaactcctttaaacttgagtttcttgagttttgagtggtactttttcatcacgtattttaaacttga 10840481  T
Q  465 gcttgagttttaatcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaact 564  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10840482 gcttgagttttagtccttgcaaataggggtcatttaaaatttggttccttaattcattaatcctgacattttgccacttcaaaatttaatcatttaaact 10840581  T
Q  565 ttcgtccctcttcccacttaatcactgccacgtcactaattagaaacat-----atggaatggaatgacttttttgcccttaatgaggtctgacacatgc 659  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||    
T  10840582 ttcgtccctcttcccacttaatcactgtcacgtcactaattagaaacatatggaatggaatggaatgacttttttgcccttaatgaggtctgacacatgc 10840681  T
Q  660 aaaattacccttttgcccctttattcttgtttcttctccaaaacccagattgcaatctctctttttctctctccctttcccgtataatcttccagaacca 759  Q
     ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10840682 gaaattacccttttgctcctttattcttgttccttctccaaaacccaaattgcaatctctctttttctctctccctttcccgtataatcttccagaacca 10840781  T
Q  760 acctccatgaaacattcttgctgagcatcaaacccaacaacccagaaagag 810  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10840782 acctccatgaaacactcttgctgagcatcaaacccaacaacccagaaagag 10840832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 473 - 597
Target Start/End: Original strand, 6846798 - 6846922
Alignment:
Q  473 tttaatcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccc 572  Q
    ||||||||  ||||||||||||||||||||| ||||| | | ||||| |||||||   ||||||| | || ||||||| ||||||||||| |||||||||    
T  6846798 tttaatccctgcaaataggggtcatttaaaaattggtccttgaattcgttaatccgggcattttgtccctgcaaaattgaatcatttaaaatttcgtccc 6846897  T
Q  573 tcttcccacttaatcactgccacgt 597  Q
    |||||||||||||| ||||||||||    
T  6846898 tcttcccacttaattactgccacgt 6846922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 485 - 605
Target Start/End: Original strand, 2940961 - 2941082
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctct-tcccactt 583  Q
    ||||||||||||||||||||||||| ||| ||||  ||||||||| ||||||  |||| ||||||||| ||||||||| ||| ||||||||  |||||||    
T  2940961 aaataggggtcatttaaaatttggtccctgaatttgttaatcctagcattttatcactacaaaatttattcatttaaaatttggtccctctcccccactt 2941060  T
Q  584 aatcactgccacgtcactaatt 605  Q
    ||||| || |||||||||||||    
T  2941061 aatcagtgtcacgtcactaatt 2941082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 483 - 562
Target Start/End: Complemental strand, 10841780 - 10841701
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaa 562  Q
    ||||||||||||||||||||||||  | ||| ||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  10841780 gcaaataggggtcatttaaaattttatccctgaattcgttaatcctggcattttgccacttcaaaatttaatcatttaaa 10841701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 485 - 606
Target Start/End: Original strand, 11689567 - 11689688
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccactta 584  Q
    ||||||||||||||||||| ||| | |||  |||| |||||||   ||||||| |    ||||||||||||| ||||| |||||||| ||| ||||||||    
T  11689567 aaataggggtcatttaaaaattgatccctgtattctttaatcccggcattttgtcctgccaaaatttaatcacttaaaatttcgtccatctccccactta 11689666  T
Q  585 atcactgccacgtcactaatta 606  Q
    ||||||||||||||||||||||    
T  11689667 atcactgccacgtcactaatta 11689688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 485 - 606
Target Start/End: Complemental strand, 11721492 - 11721371
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccactta 584  Q
    ||||||||||||||||||| ||| | |||  |||| |||||||| |||||||  |    ||||||||||||| ||||| ||||||| |||| ||||||||    
T  11721492 aaataggggtcatttaaaaattgatccctgtattctttaatcctgacattttatcctgccaaaatttaatcacttaaaatttcgtctctctccccactta 11721393  T
Q  585 atcactgccacgtcactaatta 606  Q
    ||||||| ||||||||||||||    
T  11721392 atcactgtcacgtcactaatta 11721371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 15848178 - 15848234
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  15848178 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 15848234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 37895685 - 37895629
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  37895685 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 37895629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 605
Target Start/End: Complemental strand, 6848138 - 6848016
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    ||||||| ||||||||||||| |||||   | ||||| |||||||| |||||||| | ||  |||||||||||||||||| |||||||| ||  ||||||    
T  6848138 gcaaataagggtcatttaaaaattggtcattgaattcgttaatcctgacattttgtccctgaaaaatttaatcatttaaaatttcgtccatcaccccact 6848039  T
Q  583 taatcactgccacgtcactaatt 605  Q
    |||| ||| |||||||| |||||    
T  6848038 taattactaccacgtcagtaatt 6848016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 36382251 - 36382307
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  36382251 tttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcactaatt 36382307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 39423605 - 39423661
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  39423605 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 39423661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 44714099 - 44714043
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  44714099 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 44714043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 549 - 607
Target Start/End: Complemental strand, 6577615 - 6577557
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  6577615 tttaattatttaaaaatccgtccctcttcccacttaatcactgccacgtcactaattag 6577557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 835 - 876
Target Start/End: Original strand, 10840832 - 10840873
Alignment:
Q  835 gcatcttcaaagtgataactgtgttttcagtattcatctcac 876  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10840832 gcatcttcaaagtgataactgtgttttcagtattcatctcac 10840873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 596
Target Start/End: Original strand, 16099079 - 16099192
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||| |||||||||||||||| ||||| |||  | ||| |||||||  || ||| || || ||   |||||||||||||| |||||||||||| ||||||    
T  16099079 gcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccact 16099178  T
Q  583 taatcactgccacg 596  Q
    ||||||||||||||    
T  16099179 taatcactgccacg 16099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 2318248 - 2318304
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||||||||    
T  2318248 tttaatcatttaaaatttcgtccctctccccacttaattaatgccacgtcactaatt 2318304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 544 - 604
Target Start/End: Complemental strand, 3653423 - 3653363
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaat 604  Q
    |||| |||||||||||||| ||||||||||||||| | ||||||||| |||||||||||||    
T  3653423 caaagtttaatcatttaaaatttcgtccctcttccaagttaatcactaccacgtcactaat 3653363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 10712813 - 10712869
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||    
T  10712813 tttaatcatttaaaatttcatccctctccccacttaatcactaccacgtcactaatt 10712869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 36479808 - 36479864
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||    
T  36479808 tttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcactaatt 36479864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 36755183 - 36755239
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| |||||||||||||    
T  36755183 tttaatcatttaaaatttcgtctctctccccacttaatcactgtcacgtcactaatt 36755239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 6657968 - 6658015
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  6657968 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 483 - 598
Target Start/End: Complemental strand, 11349609 - 11349494
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    ||||||||| ||||||||||||||| |   | ||||| |||||||| ||| ||||   ||  |||||||||||||||||| |||||||||||  |||| |    
T  11349609 gcaaataggagtcatttaaaatttgatctttgaattcgttaatcctgacagtttgtacctataaaatttaatcatttaaaatttcgtccctcaacccagt 11349510  T
Q  583 taatcactgccacgtc 598  Q
    |||||| |||||||||    
T  11349509 taatcagtgccacgtc 11349494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 39498400 - 39498447
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  39498400 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 39498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 14900789 - 14900743
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  14900789 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 14900743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 33739794 - 33739840
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  33739794 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33739840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 549 - 594
Target Start/End: Complemental strand, 11163361 - 11163316
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  11163361 tttaatcatttaaaatttcgtccctctccccacttaatcactgcca 11163316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 599
Target Start/End: Original strand, 25623351 - 25623428
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||  ||||||||| ||  |||| ||||||||||||| |||||||||||| |||  ||||||||||||||||||    
T  25623351 taatcctcccattttgcccctgtaaaaattaatcatttaaaatttcgtccctctacccggttaatcactgccacgtca 25623428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 485 - 588
Target Start/End: Original strand, 16105578 - 16105681
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccactta 584  Q
    ||||||||| |||||||||  |||| |||  |||| |||||||| ||||||||||    ||||||||||||||||||| ||| ||| |||  ||||||||    
T  16105578 aaataggggccatttaaaaaatggtccctgcattccttaatcctgacattttgccctcccaaaatttaatcatttaaaatttagtctctccccccactta 16105677  T
Q  585 atca 588  Q
    ||||    
T  16105678 atca 16105681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 544 - 591
Target Start/End: Original strand, 17266483 - 17266530
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactg 591  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||    
T  17266483 caaaatttaatcatttaaaatttggtccctctccccacttaatcactg 17266530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 13995979 - 13995933
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  13995979 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 13995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 607
Target Start/End: Original strand, 25892484 - 25892542
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    ||||||||||||||  ||||||||||| |||||||||| ||| ||||||| ||||||||    
T  25892484 tttaatcatttaaaaattcgtccctctccccacttaattactaccacgtctctaattag 25892542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 33062356 - 33062310
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||| | |||||||||||| ||||||||||||||||||||    
T  33062356 ttaatcatttataatttcgtccctctccccacttaatcactgccacg 33062310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 41248865 - 41248819
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  41248865 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 41248819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 605
Target Start/End: Original strand, 11347508 - 11347569
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||||||||| ||||||| |||| || | ||||||| ||||||||| ||||||    
T  11347508 caaaatttaatcatttaaaatttcgtctctctccctaattaatcagtgccacgtcgctaatt 11347569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 44045339 - 44045290
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    ||||||||||||| ||| ||||||| ||||| ||||||||||||||||||    
T  44045339 ttaatcatttaaaattttgtccctcatcccagttaatcactgccacgtca 44045290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 544 - 604
Target Start/End: Complemental strand, 25231191 - 25231131
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaat 604  Q
    |||| |||||||||||||| ||||||||||  ||||| ||||| |||||||||||| ||||    
T  25231191 caaactttaatcatttaaaatttcgtcccttgtcccagttaatgactgccacgtcattaat 25231131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 34447903 - 34447958
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||| ||||||| ||||||| |||| ||||||||||||||||||| |||||||||    
T  34447903 tttaataatttaaa-tttcgtctctctccccacttaatcactgccacatcactaatt 34447958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 15848425 - 15848370
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  15848425 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 15848370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 34448132 - 34448077
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  34448132 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 34448077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 1696046 - 1696000
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||| ||||    
T  1696046 ttaatcgtttaaaatttcgtccctctccccacttaatcactgtcacg 1696000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 595
Target Start/End: Complemental strand, 25624447 - 25624397
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    |||| ||||||||||||| |||||||||||| |||  ||||||||||||||    
T  25624447 aaaaattaatcatttaaaatttcgtccctctacccggttaatcactgccac 25624397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 607
Target Start/End: Complemental strand, 25893556 - 25893498
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    ||||||||||||||  |||||  |||| ||| |||||||||||||||||| ||||||||    
T  25893556 tttaatcatttaaaaattcgtttctctccccccttaatcactgccacgtccctaattag 25893498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 607
Target Start/End: Original strand, 44044205 - 44044262
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    ||||||||||||| ||||||||||   |||| ||||| |||||||||||||| |||||    
T  44044205 ttaatcatttaaaatttcgtccctgagcccaattaattactgccacgtcactgattag 44044262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 594
Target Start/End: Original strand, 45556202 - 45556247
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| ||| |||||||| || |||||||||||||||    
T  45556202 tttaatcatttaaaattttgtccctctccctacttaatcactgcca 45556247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 3e-29; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 692 - 799
Target Start/End: Complemental strand, 32063575 - 32063472
Alignment:
Q  692 cttctccaaaacccagattgcaatctctctttttctctctccctttcccgtataatcttccagaaccaacctccatgaaacattcttgctgagcatcaaa 791  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||||  |||||||||    ||||||||||||||||||||||||||||||||||||||    
T  32063575 cttctccaaaacccaaattgcaatctctcttcttctctttccctttcatgtataatct----gaaccaacctccatgaaacattcttgctgagcatcaaa 32063480  T
Q  792 cccaacaa 799  Q
    | ||||||    
T  32063479 cacaacaa 32063472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 485 - 604
Target Start/End: Complemental strand, 52298388 - 52298269
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccactta 584  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||| ||||||| |  | ||||||||||||||||||| |||||| ||| | |||| |||    
T  52298388 aaataggggtcatttaaaatttggttcctgaatttgttaatcctagcattttgtctatgcaaaatttaatcatttaaaatttcgttcctatccccattta 52298289  T
Q  585 atcactgccacgtcactaat 604  Q
    ||| ||  || |||||||||    
T  52298288 atctctatcatgtcactaat 52298269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 483 - 600
Target Start/End: Complemental strand, 41583635 - 41583518
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||| |||||||||||||||| ||| || ||  ||||  |||||||  ||  ||||| || ||||| ||||||||||||| |||||||||||||| ||||    
T  41583635 gcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttcgtccctcttctcact 41583536  T
Q  583 taatcactgccacgtcac 600  Q
    ||||||||||||||||||    
T  41583535 taatcactgccacgtcac 41583518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 14801826 - 14801882
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  14801826 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 14801882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 34765718 - 34765662
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  34765718 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 34765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 606
Target Start/End: Complemental strand, 7280477 - 7280387
Alignment:
Q  516 attcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    |||| ||||| || |||||||||||  |||||||||||||| ||||| ||  ||| |||| ||||||||||||||||||||||||||||||    
T  7280477 attctttaattctgacattttgccatgtcaaaatttaatcacttaaaattatgtctctctccccacttaatcactgccacgtcactaatta 7280387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 602
Target Start/End: Original strand, 52298111 - 52298169
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcacta 602  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  52298111 caaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcacta 52298169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 550 - 607
Target Start/End: Original strand, 16605693 - 16605750
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  16605693 ttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattag 16605750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 483 - 600
Target Start/End: Original strand, 40387491 - 40387608
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||| |||||| ||||||||| ||||| |||  ||||  |||||||  ||  ||||| || ||||| ||||||||||||| |||||| ||||||| ||||    
T  40387491 gcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttcgttcctcttctcact 40387590  T
Q  583 taatcactgccacgtcac 600  Q
    ||||||||||||||||||    
T  40387591 taatcactgccacgtcac 40387608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 542 - 607
Target Start/End: Complemental strand, 48529921 - 48529856
Alignment:
Q  542 ttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    ||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||| |||||    
T  48529921 ttcaaaatttaatcatttaaaattttgtccctctctccacttaatcactgccacgtcactgattag 48529856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 24411448 - 24411504
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||    
T  24411448 tttaatcatttaaagattcgtccctcttcccacttaatcactcccacgtcactaatt 24411504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 35028336 - 35028280
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  35028336 tttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatt 35028280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 489 - 605
Target Start/End: Original strand, 41582477 - 41582593
Alignment:
Q  489 aggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatca 588  Q
    ||||||||||||||| ||||| |||  | || ||||||||  ||  ||||| || ||||| ||||||||||||| ||||||||||| || || |||||||    
T  41582477 aggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatcatttaaaatttcgtccctcatcacagttaatca 41582576  T
Q  589 ctgccacgtcactaatt 605  Q
     ||||||||||||||||    
T  41582577 ttgccacgtcactaatt 41582593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 53701902 - 53701958
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  53701902 tttaatcatttaaaatttcttccctctccccacttaatcactgccacgtcactaatt 53701958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 550 - 604
Target Start/End: Original strand, 24349765 - 24349819
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaat 604  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  24349765 ttaatcatttaaaatttcgtccctctccccagttaatcactgccacgtcactaat 24349819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 599
Target Start/End: Complemental strand, 23455726 - 23455649
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||  ||||||||||||  |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||    
T  23455726 taatcctcccattttgccactgtaaaaattaatcatttcaaatttcgtccctcttcccgattaatcactgccacgtca 23455649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 15508011 - 15507955
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||| |||||||||||    
T  15508011 tttaatcatttaaaatttcgtctctctccccacttaatcactgccgcgtcactaatt 15507955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 553 - 605
Target Start/End: Complemental strand, 17356256 - 17356204
Alignment:
Q  553 atcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  17356256 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatt 17356204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 37976491 - 37976435
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||    
T  37976491 tttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcactaatt 37976435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 548 - 596
Target Start/End: Complemental strand, 43155835 - 43155787
Alignment:
Q  548 atttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  43155835 atttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 43155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 52909343 - 52909399
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||    
T  52909343 tttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcactaatt 52909399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 483 - 606
Target Start/End: Original strand, 11857916 - 11858039
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||||||| ||||||||||||  |||| |||  |||| ||||||||  ||||||||     ||||||||||||| |||||  || ||||||| | |||||    
T  11857916 gcaaatagaggtcatttaaaaaatggtccctgtattccttaatcctggcattttgctctgccaaaatttaatcacttaaaaattggtccctcattccact 11858015  T
Q  583 taatcactgccacgtcactaatta 606  Q
    ||||||||| ||||||||||||||    
T  11858016 taatcactgtcacgtcactaatta 11858039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 13058127 - 13058174
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  13058127 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 13058174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 23613399 - 23613446
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  23613399 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23613446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 36009151 - 36009104
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36009151 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 49879514 - 49879467
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  49879514 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 49879467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 4983032 - 4982986
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  4983032 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 4982986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 9145072 - 9145026
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  9145072 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 9145026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 27934623 - 27934669
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  27934623 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 42738337 - 42738291
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  42738337 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 42738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 595
Target Start/End: Complemental strand, 44967376 - 44967330
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||    
T  44967376 tttaatcatttaaaatttcgtccctctccccacttaatcactgccac 44967330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 55867452 - 55867402
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  55867452 tttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtca 55867402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 53129836 - 53129788
Alignment:
Q  557 tttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  53129836 tttaaaatttcgtccctctccccacttaatcactgccacatcactaatt 53129788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 5369037 - 5369084
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  5369037 tttaatcatttaaaattttgtccctctccccacttaatcactgccacg 5369084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 18831439 - 18831486
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  18831439 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 18831486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 24711201 - 24711248
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| |||||||||||||| |||||    
T  24711201 tttaatcatttaaaatttcgtccctctccccacttaatcactaccacg 24711248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 544 - 607
Target Start/End: Original strand, 48528557 - 48528620
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    ||||||||||||||||||| |||||| ||| | ||||||||||||||| ||| ||||| |||||    
T  48528557 caaaatttaatcatttaaaatttcgttcctatccccacttaatcactgtcacatcactgattag 48528620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 50418975 - 50418928
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  50418975 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacg 50418928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 550 - 601
Target Start/End: Original strand, 56014816 - 56014867
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcact 601  Q
    ||||||||||||| ||||||||||| || || ||||||||||||||||||||    
T  56014816 ttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcact 56014867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 9400825 - 9400779
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  9400825 ttaatcatttaaaatttcatccctctccccacttaatcactgccacg 9400779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 604
Target Start/End: Complemental strand, 10781821 - 10781767
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaat 604  Q
    ||||||||||||| |||||||||||| |||| |||| ||||| ||||||||||||    
T  10781821 ttaatcatttaaaatttcgtccctctccccagttaaccactgtcacgtcactaat 10781767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 22566890 - 22566936
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  22566890 ttaatcatttaaaatttcatccctctccccacttaatcactgccacg 22566936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 32950233 - 32950279
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  32950233 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 32950279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 33247579 - 33247533
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  33247579 ttaatcatttaaaatttcatccctctccccacttaatcactgccacg 33247533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 34837380 - 34837334
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  34837380 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 34837334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 604
Target Start/End: Original strand, 54434280 - 54434334
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaat 604  Q
    ||||||||||||| || ||||| || ||||| |||||||||||||||||||||||    
T  54434280 ttaatcatttaaaattacgtccttcatcccagttaatcactgccacgtcactaat 54434334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 605
Target Start/End: Complemental strand, 30642489 - 30642428
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||| |||||||||||||| ||||||||||   |||||||||| |||||||||||| |||||    
T  30642489 caaagtttaatcatttaaaatttcgtcccttgacccacttaatgactgccacgtcattaatt 30642428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 605
Target Start/End: Complemental strand, 40388449 - 40388388
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||| ||||||||||||| ||||||||||  || || ||||||| ||||||||||||||||    
T  40388449 caaaagttaatcatttaaaatttcgtccctgatcacagttaatcattgccacgtcactaatt 40388388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 35508578 - 35508522
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||  |||| |||||||||||||||||| |||| |||||    
T  35508578 tttaatcatttaaaatttcgtatctctccccacttaatcactgccatgtcattaatt 35508522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 593
Target Start/End: Original strand, 37248326 - 37248370
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcc 593  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||    
T  37248326 tttaatcatttaaaatttcgtcgctctccccacttaatcactgcc 37248370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 54087033 - 54086977
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| ||||||||||||||  || ||||||||||    
T  54087033 tttaatcatttaaaatttcgtctctctccccacttaatcactaacatgtcactaatt 54086977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 551 - 607
Target Start/End: Complemental strand, 54435433 - 54435377
Alignment:
Q  551 taatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||| ||||||| |||||||||||||||| ||||||||||  ||| |||||||||||    
T  54435433 taattatttaaaatttcgtccctcttcccccttaatcactaacacatcactaattag 54435377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 8439561 - 8439506
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| ||||||||||   ||||||||||||| ||||||||| |||||    
T  8439561 ttaatcatttaaaatttcgtcccttgacccacttaatcaccgccacgtcagtaatt 8439506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 46661251 - 46661196
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  46661251 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 46661196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 601
Target Start/End: Complemental strand, 56015984 - 56015933
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcact 601  Q
    ||||||||||||| |||||||| || || || ||||||||||||||||||||    
T  56015984 ttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtcact 56015933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 591
Target Start/End: Original strand, 16005928 - 16005970
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactg 591  Q
    |||||||||||||| |||||||||||| || ||||||||||||    
T  16005928 tttaatcatttaaaatttcgtccctctccctacttaatcactg 16005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 38012261 - 38012307
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| ||||||| |||| ||||||||||||||||||||    
T  38012261 ttaatcgtttaaaatttcgtctctctccccacttaatcactgccacg 38012307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 4e-28; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 692 - 801
Target Start/End: Original strand, 6956438 - 6956543
Alignment:
Q  692 cttctccaaaacccagattgcaatctctctttttctctctccctttcccgtataatcttccagaaccaacctccatgaaacattcttgctgagcatcaaa 791  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||||  |||||||||    |||||||||||||||||||| |||||||||||||||||    
T  6956438 cttctccaaaacccatattgcaatctctcttcttctctttccctttcatgtataatct----gaaccaacctccatgaaacactcttgctgagcatcaaa 6956533  T
Q  792 cccaacaacc 801  Q
    | ||||||||    
T  6956534 cacaacaacc 6956543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 521 - 606
Target Start/End: Original strand, 30380908 - 30380993
Alignment:
Q  521 ttaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    |||||||| | |||||| ||  |||||||||||||||||||| ||||||||||||  |||||| ||||||||||||||||||||||    
T  30380908 ttaatcctgatattttgtcatgtcaaaatttaatcatttaaaatttcgtccctctgtccacttgatcactgccacgtcactaatta 30380993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 548 - 605
Target Start/End: Complemental strand, 33689718 - 33689661
Alignment:
Q  548 atttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  33689718 atttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 33689661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 473 - 595
Target Start/End: Complemental strand, 14634166 - 14634044
Alignment:
Q  473 tttaatcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccc 572  Q
    |||| |||| ||||||||||||||||||||| ||||| |||  |||| ||||||    |||||||||    ||||||||||||| | ||||||||||||     
T  14634166 tttagtccttgcaaataggggtcatttaaaaattggtccctgtattccttaatcgaggcattttgccctgccaaaatttaatcactaaaactttcgtcct 14634067  T
Q  573 tcttcccacttaatcactgccac 595  Q
    ||| |||||||||||||||||||    
T  14634066 tctccccacttaatcactgccac 14634044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 544 - 606
Target Start/End: Complemental strand, 20704670 - 20704608
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  20704670 caaaatttaatcacttaaaatttcgtccctcttcccacttaatcacagtcacgtcactaatta 20704608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 607
Target Start/End: Complemental strand, 33156332 - 33156274
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  33156332 tttaatcatttaaaatttcgtccctccccccacttaatcactgccacgtcactaattag 33156274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 23458317 - 23458261
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  23458317 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatt 23458261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 26463936 - 26463880
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  26463936 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatt 26463880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 40758234 - 40758290
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  40758234 tttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatt 40758290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 9367832 - 9367887
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  9367832 ttaatcatttaaaatttcgtccctcatcccaattaatcactgccacgtcactaatt 9367887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 549 - 600
Target Start/End: Complemental strand, 51994224 - 51994173
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcac 600  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  51994224 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 483 - 601
Target Start/End: Original strand, 20704454 - 20704572
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    ||||||| | |||||||||||  ||||||||  |||| |||||| | ||||||||||    ||||||||||||| ||||| || ||||||||| ||||||    
T  20704454 gcaaataagagtcatttaaaaaatggttcctatattccttaatcttgacattttgccctgccaaaatttaatcacttaaaattccgtccctctccccact 20704553  T
Q  583 taatcactgccacgtcact 601  Q
    |||||||| ||| ||||||    
T  20704554 taatcactaccatgtcact 20704572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 599
Target Start/End: Complemental strand, 32717142 - 32717065
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||  ||||||||| ||  |||| ||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  32717142 taatccttccattttgcccctgtaaaaattaatcatttaaaatttcgtccctcttcccaattaattactgccacgtca 32717065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 544 - 605
Target Start/End: Original strand, 41988047 - 41988108
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||||||||| ||||||| |||| | ||||||||||||||||| |||||||||    
T  41988047 caaaatttaatcatttaaaatttcgtctctctcctcacttaatcactgccacatcactaatt 41988108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 9294296 - 9294240
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||    
T  9294296 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatt 9294240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 544 - 604
Target Start/End: Complemental strand, 39399435 - 39399375
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaat 604  Q
    ||||||||||||||||||| |||| || |||| |||| |||||||||||||||||||||||    
T  39399435 caaaatttaatcatttaaaatttcatctctctccccagttaatcactgccacgtcactaat 39399375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 544 - 604
Target Start/End: Complemental strand, 54317974 - 54317914
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaat 604  Q
    ||||||||||||||||||| ||||||| |||| || | |||||||||||||||||||||||    
T  54317974 caaaatttaatcatttaaaatttcgtctctctccctaattaatcactgccacgtcactaat 54317914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 2796269 - 2796316
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  2796269 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 2796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 8041707 - 8041753
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  8041707 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 8041753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 10770797 - 10770751
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  10770797 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 10770751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 29192121 - 29192175
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  29192121 aaaaattaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtca 29192175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 36314604 - 36314558
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36314604 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36314558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 48322683 - 48322637
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  48322683 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 48322637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 54466514 - 54466560
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  54466514 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 54466560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 43384373 - 43384429
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| || ||||||||||    
T  43384373 tttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatt 43384429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 600
Target Start/End: Complemental strand, 44654846 - 44654790
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcac 600  Q
    ||||||||||||| ||||| |||||||||||| |||| |||||||||| ||||||||    
T  44654846 caaaatttaatcacttaaaatttcgtccctctccccatttaatcactgtcacgtcac 44654790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 19741230 - 19741183
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  19741230 tttaatcatttaaaatttcgtcactctccccacttaatcactgccacg 19741183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 490 - 605
Target Start/End: Complemental strand, 40506184 - 40506069
Alignment:
Q  490 ggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcac 589  Q
    |||||||||||||| |||||||||  | || |||||||| ||| ||| ||  | ||  ||||||||||||||| ||||||| |||| | |||||||||||    
T  40506184 ggggtcatttaaaagttggttcctgtaatcgttaatcctgacaatttacccttacattatttaatcatttaaaatttcgtctctctccgcacttaatcac 40506085  T
Q  590 tgccacgtcactaatt 605  Q
    || || || |||||||    
T  40506084 tgtcatgtaactaatt 40506069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 21783900 - 21783783
Alignment:
Q  482 ggcaaataggggtcatttaaaatttggttcctta-attcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttccca 580  Q
    ||||| |||||||| ||||||| || || ||||| |||| ||||||||  ||||||  | || ||||||||||||||||||| |||||| ||||  ||||    
T  21783900 ggcaattaggggtcgtttaaaaattagt-ccttatattcgttaatccttgcattttatccctgcaaaatttaatcatttaaaatttcgttcctcagccca 21783802  T
Q  581 cttaatcactgccacgtca 599  Q
     |||||||||| |||||||    
T  21783801 attaatcactgtcacgtca 21783783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 544 - 605
Target Start/End: Original strand, 42854520 - 42854579
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||||||||| ||||||| ||||  |||||||||||||||||| ||| |||||    
T  42854520 caaaatttaatcatttaaaatttcgtctctct--ccacttaatcactgccacctcagtaatt 42854579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 599
Target Start/End: Original strand, 25107304 - 25107353
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    ||||||||||||| ||||||||||| || || ||||||||||||||||||    
T  25107304 ttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtca 25107353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 607
Target Start/End: Complemental strand, 25108432 - 25108375
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    ||||||||||||| |||||||| || || || |||||||||||||||||||| |||||    
T  25108432 ttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtcactgattag 25108375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 594
Target Start/End: Original strand, 46474905 - 46474950
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||||    
T  46474905 tttaatcatttaaaattttgtccctctccccacttaatcactgcca 46474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 53756834 - 53756890
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||| |||||||| ||||||| || || ||||||||||    
T  53756834 tttaatcatttaaaatttcgtccatcttcccatttaatcattgtcatgtcactaatt 53756890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 599
Target Start/End: Original strand, 2943986 - 2944053
Alignment:
Q  532 attttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||| ||  |||| |||||||||| ||  |||||||||||||||  ||||||||||||||||||    
T  2943986 attttgcccctgtaaaagttaatcatttgaaagttcgtccctcttcccggttaatcactgccacgtca 2944053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 606
Target Start/End: Complemental strand, 4521825 - 4521762
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctct-tcccacttaatcactgccacgtcactaatta 606  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||||||| ||||  ||||||||||    
T  4521825 caaaatttaatcacttaaaatttcgtccctctcccccacttaatcaccgccagatcactaatta 4521762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 23458070 - 23458125
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  23458070 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 23458125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 46475118 - 46475063
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  46475118 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 46475063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 55052586 - 55052539
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| |||| ||||||||| |||||    
T  55052586 tttaatcatttaaaatttcgtccctctccccatttaatcactaccacg 55052539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 550 - 604
Target Start/End: Complemental strand, 21186032 - 21185978
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaat 604  Q
    ||||||||||||| ||||||||||   ||||||||||||| ||||||||| ||||    
T  21186032 ttaatcatttaaaatttcgtcccttgacccacttaatcaccgccacgtcagtaat 21185978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 32716335 - 32716389
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||| |||| |||||||| |||||||||||||||   ||||||||||||||||||    
T  32716335 aaaaattaaccatttaaaatttcgtccctcttccagattaatcactgccacgtca 32716389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 591
Target Start/End: Complemental strand, 40033794 - 40033752
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactg 591  Q
    |||||||||||||| ||| |||||||| |||||||||||||||    
T  40033794 tttaatcatttaaaattttgtccctctccccacttaatcactg 40033752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 763 - 801
Target Start/End: Complemental strand, 43608684 - 43608646
Alignment:
Q  763 tccatgaaacattcttgctgagcatcaaacccaacaacc 801  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  43608684 tccatgaaacactcttgctgagcatcaaacacaacaacc 43608646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 2e-24; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 483 - 605
Target Start/End: Complemental strand, 27999254 - 27999133
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||||||||| | |||||||||||||||||  ||||| |||||   |  ||||||||||| |||||||||||||||| || ||||||| |||||||||||    
T  27999254 gcaaatagggcttatttaaaatttggttcccaaattcgttaataa-agtattttgccactacaaaatttaatcattttaaatttcgtctctcttcccact 27999156  T
Q  583 taatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||||    
T  27999155 taatcactgccacctcactaatt 27999133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 483 - 606
Target Start/End: Original strand, 42267327 - 42267450
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    ||||||||||||||||||||| ||||| |||  |||| |||||||| ||| |||| |    ||||||||||||||||||  ||||||| |||| ||||||    
T  42267327 gcaaataggggtcatttaaaaattggtccctgtattctttaatcctgacaatttgtcctgccaaaatttaatcatttaatatttcgtctctctccccact 42267426  T
Q  583 taatcactgccacgtcactaatta 606  Q
    |||||||| |||||||||||||||    
T  42267427 taatcactaccacgtcactaatta 42267450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 4960630 - 4960686
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4960630 tttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatt 4960686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 17662188 - 17662132
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17662188 tttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatt 17662132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 473 - 607
Target Start/End: Complemental strand, 34850479 - 34850345
Alignment:
Q  473 tttaatcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccc 572  Q
    ||||||||| |||| |||||||| ||||||| ||||| |||  ||||  |||||||  ||  || ||  | ||||||||||||||||||| |||| ||||    
T  34850479 tttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcatccc 34850380  T
Q  573 tcttcccacttaatcactgccacgtcactaattag 607  Q
    ||| ||||||||||||||||||||||||| |||||    
T  34850379 tctccccacttaatcactgccacgtcactgattag 34850345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 485 - 606
Target Start/End: Complemental strand, 22103908 - 22103787
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccactta 584  Q
    |||||||||||||||||||  |||| | |  |||  ||||||||   ||||||||   |||||||||||||| ||||| ||||||||||||  |||||||    
T  22103908 aaataggggtcatttaaaaaatggtccatgtattttttaatcctgctattttgccctgtcaaaatttaatcacttaaaatttcgtccctctctccactta 22103809  T
Q  585 atcactgccacgtcactaatta 606  Q
    ||||||||||||||||||||||    
T  22103808 atcactgccacgtcactaatta 22103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 6367652 - 6367708
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  6367652 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 6367708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 543 - 606
Target Start/End: Original strand, 21444678 - 21444741
Alignment:
Q  543 tcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    |||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||    
T  21444678 tcaaaatttaatcacttaaaatttcgtccatctccccacttaatcactgccacgtcactaatta 21444741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 473 - 600
Target Start/End: Original strand, 34849025 - 34849152
Alignment:
Q  473 tttaatcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccc 572  Q
    ||||||||| |||| |||||||| ||||||| ||||| |||  ||||  |||||||  ||  || ||  | ||||||||||||||||||| |||||||||    
T  34849025 tttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatttaaaatttcgtccc 34849124  T
Q  573 tcttcccacttaatcactgccacgtcac 600  Q
    ||| ||| ||||||||||||||||||||    
T  34849125 tctcccctcttaatcactgccacgtcac 34849152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 603
Target Start/End: Complemental strand, 40210708 - 40210654
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaa 603  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  40210708 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaa 40210654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 13914405 - 13914349
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||    
T  13914405 tttaatcatttaaaatttcgtccctctccccactaaatcactgccacgtcactaatt 13914349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 533 - 605
Target Start/End: Complemental strand, 16970889 - 16970817
Alignment:
Q  533 ttttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||  |||||||||||||||||| |||||||||||| |||||||||||| ||||| |||| |||||    
T  16970889 ttttgccactgtaaaatttaatcatttaaaatttcgtccctctccccacttaatcattgccatgtcagtaatt 16970817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 24009879 - 24009823
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  24009879 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatt 24009823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 42248563 - 42248619
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||    
T  42248563 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtgactaatt 42248619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 544 - 595
Target Start/End: Original strand, 10304008 - 10304059
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  10304008 caaaatttaatcatttaaaatttcgtccctctccccacttaatcactgccac 10304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 483 - 606
Target Start/End: Original strand, 13245874 - 13245997
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||||||||  |||||||||| ||||| | |  |||| ||||||||  |||||| ||    ||||||||||||| ||||| ||| |||||||| ||||||    
T  13245874 gcaaataggattcatttaaaaattggtccttgtattccttaatcctggcattttaccctgccaaaatttaatcacttaaaattttgtccctctccccact 13245973  T
Q  583 taatcactgccacgtcactaatta 606  Q
    ||||||||| ||||||||||||||    
T  13245974 taatcactgtcacgtcactaatta 13245997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 477 - 596
Target Start/End: Original strand, 25647902 - 25648021
Alignment:
Q  477 atcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctctt 576  Q
    ||||| |||| |||||||| ||||||| ||||| |||  | || ||||||||  || ||| || || ||  ||||||||||||||| ||||||||||||     
T  25647902 atccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcatttaaaatttcgtccctctc 25648001  T
Q  577 cccacttaatcactgccacg 596  Q
    ||||||||||||||||||||    
T  25648002 cccacttaatcactgccacg 25648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 37578529 - 37578474
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  37578529 ttaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatt 37578474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 605
Target Start/End: Complemental strand, 19017968 - 19017911
Alignment:
Q  548 atttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| | |||||||||    
T  19017968 atttaatcatttaaaattttgtccctcttcccacttaatcactgccgcatcactaatt 19017911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 548 - 596
Target Start/End: Complemental strand, 183530 - 183482
Alignment:
Q  548 atttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  183530 atttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 1103551 - 1103607
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||    
T  1103551 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatt 1103607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 1841549 - 1841605
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||    
T  1841549 tttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcactaatt 1841605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 14879061 - 14879117
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||    
T  14879061 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatt 14879117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 30711417 - 30711473
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||  |||||||||||||||||| ||||||||||    
T  30711417 tttaatcatttaaaatttcgtccctcgccccacttaatcactgccatgtcactaatt 30711473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 32917350 - 32917406
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||| |||||||||    
T  32917350 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacatcactaatt 32917406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 34464787 - 34464731
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||    
T  34464787 tttaatcatttaaaattttgtccctctccccacttaatcactgccatgtcactaatt 34464731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 43758912 - 43758968
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||    
T  43758912 tttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatt 43758968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 544 - 595
Target Start/End: Complemental strand, 10304198 - 10304147
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    ||||||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  10304198 caaaatttaatcatttaaaatttcgtctctctccccacttaatcactgccac 10304147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 24905473 - 24905427
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  24905473 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 24905427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 28011454 - 28011500
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  28011454 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 28011500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 31514623 - 31514577
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31514623 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 31514577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 33442900 - 33442854
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  33442900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 473 - 602
Target Start/End: Original strand, 9443586 - 9443715
Alignment:
Q  473 tttaatcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccc 572  Q
    |||| |||| |||||||||||||||||||||  ||||  ||  |||| ||||||||  ||||||| |    ||||||||||||||||||| ||| |||||    
T  9443586 tttagtccttgcaaataggggtcatttaaaaaatggtctctgtattccttaatcctggcattttgtcctcccaaaatttaatcatttaaaatttggtccc 9443685  T
Q  573 tcttcccacttaatcactgccacgtcacta 602  Q
    ||  |||||||||||| || || |||||||    
T  9443686 tccccccacttaatcattgtcaagtcacta 9443715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 35152433 - 35152489
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||| |||||||| |||||||||||||||| | ||||||||||    
T  35152433 tttaatcatttaaaattttgtccctctccccacttaatcactgcaatgtcactaatt 35152489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 596
Target Start/End: Complemental strand, 47999431 - 47999383
Alignment:
Q  548 atttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  47999431 atttaatcatttaaaatatcgtccctctccccacttaatcactgccacg 47999383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 26024513 - 26024560
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  26024513 tttaatcatttaaaagttcgtccctctccccacttaatcactgccacg 26024560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 4716774 - 4716728
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  4716774 ttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 4716728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 13295221 - 13295275
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||| ||||||||||||| | ||||||||||||||  ||||||||||||||||||    
T  13295221 aaaaattaatcatttaaaatgtcgtccctcttcccggttaatcactgccacgtca 13295275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 603
Target Start/End: Original strand, 25065019 - 25065077
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaa 603  Q
    |||| ||||||||||||  |||||||||||| | ||||| |||||||||||||||||||    
T  25065019 aaaaattaatcatttaagatttcgtccctctcctcacttgatcactgccacgtcactaa 25065077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 607
Target Start/End: Complemental strand, 25065972 - 25065910
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||| ||||||||||||  ||||||||||||  |||||||||||||||||| ||||| |||||    
T  25065972 aaaaattaatcatttaagatttcgtccctctctccacttaatcactgccacctcactgattag 25065910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 607
Target Start/End: Complemental strand, 44523474 - 44523416
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||||||||||||| |||| ||||||    |||||||||||||||||||||||||||||    
T  44523474 tttaatcatttaaaatttcatccctcccttcacttaatcactgccacgtcactaattag 44523416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 52134159 - 52134205
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  52134159 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 52134205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 594
Target Start/End: Original strand, 19515909 - 19515954
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||| ||||||| |||||||||||| ||||||||||||||||||    
T  19515909 tttaattatttaaaatttcgtccctctccccacttaatcactgcca 19515954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 485 - 606
Target Start/End: Original strand, 32927284 - 32927405
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccactta 584  Q
    ||||| ||||||||||||| || || | | |||| ||||||||| |||||||| | || ||||||||||||| ||||| ||| ||||||    ||| |||    
T  32927284 aaatatgggtcatttaaaaattagtccttgaatttattaatcctgacattttgtcgctacaaaatttaatcagttaaaatttggtccctaaatccattta 32927383  T
Q  585 atcactgccacgtcactaatta 606  Q
    || |||||||| ||||| ||||    
T  32927384 atgactgccacatcactgatta 32927405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 594
Target Start/End: Complemental strand, 36694586 - 36694541
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||    
T  36694586 tttaatcatttaaaatttcgtctctctccccacttaatcactgcca 36694541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 594
Target Start/End: Complemental strand, 36710687 - 36710642
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||    
T  36710687 tttaatcatttaaaatttcgtctctctccccacttaatcactgcca 36710642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 594
Target Start/End: Original strand, 40772597 - 40772642
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| |||||||||||| ||||||||||||| ||||    
T  40772597 tttaatcatttaaaatttcgtccctctccccacttaatcaccgcca 40772642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 477 - 597
Target Start/End: Original strand, 40435363 - 40435483
Alignment:
Q  477 atcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctctt 576  Q
    ||||| |||| |||||||| ||||||| |||||   |  |||| ||||||||  ||||||||  ||  |||||||||||||||||| || |||| |||      
T  40435363 atccttgcaattaggggtcgtttaaaaattggtcattgtattcgttaatccttgcattttgcacctgtaaaatttaatcatttaaaattccgtctctcag 40435462  T
Q  577 cccacttaatcactgccacgt 597  Q
    |||| ||||||||||||||||    
T  40435463 cccaattaatcactgccacgt 40435483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 41098823 - 41098879
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||| ||||| || |||||||||||||| |||| |||||||||    
T  41098823 tttaatcatttaaaattttgtccccctccccacttaatcactaccacatcactaatt 41098879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 46163120 - 46163176
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| |||||||||| |||| || ||||||||||    
T  46163120 tttaatcatttaaaatttcgtctctctccccacttaattactgtcatgtcactaatt 46163176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 601
Target Start/End: Original strand, 48691242 - 48691290
Alignment:
Q  553 atcatttaaactttcgtccctcttcccacttaatcactgccacgtcact 601  Q
    |||||||||| ||| ||| |||| |||||||||||||||||||||||||    
T  48691242 atcatttaaaattttgtcactctccccacttaatcactgccacgtcact 48691290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 48779207 - 48779263
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| || | | ||||| |||||||||||||||||| ||||||||||    
T  48779207 tttaatcatttaaaattcctttcctctccccacttaatcactgccatgtcactaatt 48779263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 1841796 - 1841741
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  1841796 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 1841741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 6367899 - 6367844
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  6367899 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 6367844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 14879308 - 14879253
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  14879308 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 14879253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 551 - 606
Target Start/End: Original strand, 31197152 - 31197207
Alignment:
Q  551 taatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    |||||||||||| |||| |||||| ||| | |||||||||||||||||||| ||||    
T  31197152 taatcatttaaaatttcatccctcatcctagttaatcactgccacgtcactgatta 31197207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 48779456 - 48779401
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  48779456 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 48779401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 606
Target Start/End: Original strand, 19227047 - 19227109
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    ||||||||||||| ||||| |||||||||||| || ||||| |||||  ||||||||| ||||    
T  19227047 caaaatttaatcacttaaaatttcgtccctctcccaacttattcactatcacgtcacttatta 19227109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 594
Target Start/End: Complemental strand, 23209662 - 23209620
Alignment:
Q  552 aatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    ||||||||| | |||||||||||| ||||||||||||||||||    
T  23209662 aatcatttacaatttcgtccctctccccacttaatcactgcca 23209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 42534352 - 42534303
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    ||||||||||||| ||||||||| | ||||| |||||||| |||||||||    
T  42534352 ttaatcatttaaaatttcgtcccacatcccagttaatcacggccacgtca 42534303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 1e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 483 - 606
Target Start/End: Complemental strand, 1215270 - 1215147
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||||||||| ||||||||||  || ||| |  |||| |||| |||| |||||||||   |||||||||||||| ||||| |||||||||| | ||||||    
T  1215270 gcaaatagggctcatttaaaaaatgattcatgtattccttaagcctaccattttgccctgtcaaaatttaatcacttaaaatttcgtccctatccccact 1215171  T
Q  583 taatcactgccacgtcactaatta 606  Q
    ||||||||||||||||||||||||    
T  1215170 taatcactgccacgtcactaatta 1215147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 12080726 - 12080782
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  12080726 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 12080782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 21628051 - 21627995
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  21628051 tttaatcatttaaaattttgtccctctccccacttaatcactgccacgtcactaatt 21627995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 33517624 - 33517680
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  33517624 tttaatcatttaaaatttcgtccctctccccacttaatcactgctacgtcactaatt 33517680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 483 - 606
Target Start/End: Original strand, 26463203 - 26463326
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||| |||||||| ||||||| ||||| |||  |||| ||||||||  ||  || ||  | |||| |||||||||||||| ||||||||||| ||||| |    
T  26463203 gcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcatcccagt 26463302  T
Q  583 taatcactgccacgtcactaatta 606  Q
    ||||||||||||||||||| ||||    
T  26463303 taatcactgccacgtcactgatta 26463326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 483 - 604
Target Start/End: Original strand, 10782433 - 10782553
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    ||||||| ||||||||||||||||||||  | ||||   ||||||||| ||||||   || ||||||||||||||||||| ||||||| ||| |||||||    
T  10782433 gcaaatatgggtcatttaaaatttggttaatgaatttgctaatcctaatattttgttcctgcaaaatttaatcatttaaaatttcgtctctc-tcccact 10782531  T
Q  583 taatcactgccacgtcactaat 604  Q
    ||| | || ||| |||||||||    
T  10782532 taaactctaccatgtcactaat 10782553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 548 - 605
Target Start/End: Original strand, 33647052 - 33647109
Alignment:
Q  548 atttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||||||||||||||||||    
T  33647052 atttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaatt 33647109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 30725849 - 30725905
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||| ||||||||||||| ||||||||||    
T  30725849 tttaatcatttaaaatttcgtccctctccccatttaatcactgccatgtcactaatt 30725905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 30803951 - 30804007
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||  |||||||||    
T  30803951 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatctcactaatt 30804007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 604
Target Start/End: Original strand, 3059347 - 3059402
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaat 604  Q
    |||||||||||||| |||||||||||| | |||||||||||||||| |||||||||    
T  3059347 tttaatcatttaaaatttcgtccctctcctcacttaatcactgccatgtcactaat 3059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 28000691 - 28000645
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  28000691 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 28000645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 30337540 - 30337586
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  30337540 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 17734501 - 17734454
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  17734501 tttaatcatttaaaattttgtccctctccccacttaatcactgccacg 17734454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 543 - 606
Target Start/End: Complemental strand, 33648809 - 33648746
Alignment:
Q  543 tcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    |||||||||||||| ||||| |||| ||||||| | |||||||| |||||||| ||||||||||    
T  33648809 tcaaaatttaatcacttaaaatttcttccctctcctcacttaattactgccacatcactaatta 33648746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 363136 - 363090
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  363136 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 363090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 14196921 - 14196875
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| ||||| |||||| ||||||||||||||||||||    
T  14196921 ttaatcatttaaaatttcgcccctctccccacttaatcactgccacg 14196875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 605
Target Start/End: Original strand, 24210616 - 24210677
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||| |||||||||||||| |||| ||||||| ||| | ||||||| |||||||||||||||    
T  24210616 caaagtttaatcatttaaaatttcatccctctccccgcctaatcaccgccacgtcactaatt 24210677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 11392928 - 11392984
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||  ||| || ||||||||||||||| ||||||||||    
T  11392928 tttaatcatttaaaatttcgtctatctcccaacttaatcactgccatgtcactaatt 11392984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 824 - 875
Target Start/End: Original strand, 34535591 - 34535640
Alignment:
Q  824 tatttgtccttgcatcttcaaagtgataactgtgttttcagtattcatctca 875  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||| |||||    
T  34535591 tatttgtgcttgcatcttcaaagtgataac--tgttttcagtattcctctca 34535640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 11434893 - 11434948
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   |||| ||||||||||||||||||||||||    
T  11434893 ttaatcatttaaaatttcgtcctttgacccagttaatcactgccacgtcactaatt 11434948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 21627804 - 21627859
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  21627804 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 21627859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 25486232 - 25486188
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||||    
T  25486232 ttaatcatttaaaatttcgtccctc--cccacttaatcactgccacg 25486188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 607
Target Start/End: Complemental strand, 28498368 - 28498305
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||| |||||||||||||| ||| ||||||   |||| |||||||||||||||||||| |||||    
T  28498368 caaagtttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattag 28498305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 607
Target Start/End: Complemental strand, 29810779 - 29810716
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||| |||||||||||||| ||| ||||||   |||| |||||||||||||||||||| |||||    
T  29810779 caaagtttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattag 29810716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 30726096 - 30726041
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  30726096 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 30726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 30804198 - 30804143
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  30804198 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 30804143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 33517871 - 33517816
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  33517871 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 33517816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 11436006 - 11435957
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    ||||||||||||| ||||||||||   |||||||||||| ||||||||||    
T  11436006 ttaatcatttaaaatttcgtcccttgacccacttaatcattgccacgtca 11435957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 69055 - 69111
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  69055 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 69111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 37901 - 37845
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  37901 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 37845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 4405998 - 4405942
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  4405998 tttaatcatttaaaatttcgtccctcttcccacttaatcactgtcacgtcactaatt 4405942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 16388864 - 16388808
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  16388864 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 16388808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 36928566 - 36928622
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  36928566 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 36928622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 483 - 606
Target Start/End: Complemental strand, 22890398 - 22890275
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||||||||||||||||||||  |||| |||  |||| |||||| | ||||||| ||    |||||| |||||| ||||| ||| |||||||||||||||    
T  22890398 gcaaataggggtcatttaaaacatggtacctgtattccttaatcttgacatttttccctggcaaaatctaatcacttaaaattttgtccctcttcccact 22890299  T
Q  583 taatcactgccacgtcactaatta 606  Q
    ||||||||| ||| ||||||||||    
T  22890298 taatcactgtcacatcactaatta 22890275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 551 - 605
Target Start/End: Complemental strand, 31608849 - 31608795
Alignment:
Q  551 taatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 31608795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 13186150 - 13186206
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  13186150 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcactaatt 13186206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 35756672 - 35756728
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  35756672 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 35756728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 39071766 - 39071822
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||    
T  39071766 tttaatcatttaaaatttcgtccctctccccacttaatcactgccgcgtcactaatt 39071822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 483 - 605
Target Start/End: Complemental strand, 31873303 - 31873181
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    ||||||| |||||||||||||  |||| | || |||| |||||| |  || ||||||    ||||||||||||||||||| ||| || ||||||||||||    
T  31873303 gcaaatatgggtcatttaaaaaatggtccttttattcgttaatcttggcaatttgccctcccaaaatttaatcatttaaaattttgttcctcttcccact 31873204  T
Q  583 taatcactgccacgtcactaatt 605  Q
    |||||||||| || |||||||||    
T  31873203 taatcactgctacatcactaatt 31873181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 593
Target Start/End: Complemental strand, 12273191 - 12273147
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcc 593  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  12273191 tttaatcatttaaaatttcgtccctcttcccacttaatcactgcc 12273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 1425360 - 1425313
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  1425360 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 23663852 - 23663805
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  23663852 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23663805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 3041762 - 3041716
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  3041762 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 3041716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 606
Target Start/End: Original strand, 24085859 - 24085921
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    ||||||||||||  ||||| ||| |||||||| ||||||||||||||| ||||||||||||||    
T  24085859 caaaatttaatcgcttaaaattttgtccctctccccacttaatcactgtcacgtcactaatta 24085921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 36325325 - 36325371
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  36325325 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36325371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 38845605 - 38845559
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  38845605 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 38845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 595
Target Start/End: Original strand, 38862708 - 38862754
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||    
T  38862708 tttaatcatttaaaatttcgtccctctccccacttaatcactgccac 38862754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 40775956 - 40775910
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  40775956 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 40775910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 44407163 - 44407117
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  44407163 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 44407117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 485 - 606
Target Start/End: Original strand, 20050109 - 20050234
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcc----ca 580  Q
    ||||||||||||||||||| ||||| | |  |||| ||||| ||  |||||||||    ||||||||||||| ||||| |||||||||||| ||    ||    
T  20050109 aaataggggtcatttaaaaattggtccatgtattccttaattctggcattttgccctgccaaaatttaatcacttaaaatttcgtccctctccctccaca 20050208  T
Q  581 cttaatcactgccacgtcactaatta 606  Q
    ||||||||| ||||||||| ||||||    
T  20050209 cttaatcacagccacgtcattaatta 20050234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 36186405 - 36186349
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| || |||||||||||||||| | |||||||    
T  36186405 tttaatcatttaaaatttcgtccctctccctacttaatcactgccacattactaatt 36186349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 40318302 - 40318246
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||| ||| | |||||||||||||||| ||||||||||    
T  40318302 tttaatcatttaaaatttcgtccttctcctcacttaatcactgccatgtcactaatt 40318246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 8316926 - 8316879
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||||    
T  8316926 tttaatcatttaaaatttcgtccatctccccacttaatcactgccacg 8316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 22915696 - 22915649
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||    
T  22915696 tttaatcatttaaaattccgtccctctccccacttaatcactgccacg 22915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 23698582 - 23698535
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  23698582 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacg 23698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 2266583 - 2266629
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  2266583 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 2266629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 595
Target Start/End: Original strand, 2534785 - 2534831
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||    
T  2534785 tttaatcatttaaaatttcgtccctattcccagttaatcactgccac 2534831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 11674786 - 11674831
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  11674786 ttaatcatttaaaatttcgtccctc-tcccacttaatcactgccacg 11674831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 595
Target Start/End: Complemental strand, 12199256 - 12199211
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||    
T  12199256 ttaatcatttaaaatttcgtctctctccccacttaatcactgccac 12199211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 595
Target Start/End: Complemental strand, 12443684 - 12443639
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||    
T  12443684 ttaatcatttaaaatttcgtctctctccccacttaatcactgccac 12443639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 550 - 594
Target Start/End: Complemental strand, 35449915 - 35449871
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||    
T  35449915 ttaatcatttaaaatttcgtccctctccccatttaatcactgcca 35449871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 8747601 - 8747546
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| ||||||||||   ||||||||||||| ||||||||| |||||    
T  8747601 ttaatcatttaaaatttcgtcccttaacccacttaatcaccgccacgtcagtaatt 8747546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 606
Target Start/End: Complemental strand, 11291255 - 11291192
Alignment:
Q  543 tcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    |||||||||||||| ||||| ||| ||  |||| | ||||||||||||||||| ||||||||||    
T  11291255 tcaaaatttaatcacttaaaattttgtatctctcctcacttaatcactgccacatcactaatta 11291192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 23663636 - 23663691
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  23663636 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 23663691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 599
Target Start/End: Original strand, 34213837 - 34213904
Alignment:
Q  532 attttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||| ||  |||| |||||||||| ||  |||||||||||||||  ||||||||||||||||||    
T  34213837 attttgcccctgtaaaagttaatcatttgaaagttcgtccctcttcccggttaatcactgccacgtca 34213904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 36928813 - 36928758
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  36928813 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 36928758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 602
Target Start/End: Complemental strand, 2693860 - 2693802
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcacta 602  Q
    ||||||||||||||||||| ||| ||  |||  ||||||||||||||| ||||||||||    
T  2693860 caaaatttaatcatttaaaatttggttactccccccacttaatcactgtcacgtcacta 2693802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 602
Target Start/End: Complemental strand, 9499940 - 9499883
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcacta 602  Q
    ||||||||||||||||||| |||  ||||||  ||||||||||||||| ||||||||||    
T  9499940 caaaatttaatcatttaaaatttgatccctcc-cccacttaatcactgtcacgtcacta 9499883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 595
Target Start/End: Original strand, 38955793 - 38955839
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    |||||||||||||| |||| ||||||| | |||||||||||||||||    
T  38955793 tttaatcatttaaaatttcatccctctcctcacttaatcactgccac 38955839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 801
Target Start/End: Original strand, 1231854 - 1231911
Alignment:
Q  745 aatcttccagaaccaacctccatgaaacattcttgctg-agcatcaaacccaacaacc 801  Q
    |||||||||||||||||||| |||||||| ||||| || |  ||||||||||||||||    
T  1231854 aatcttccagaaccaacctctatgaaacactcttgatgaattatcaaacccaacaacc 1231911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 607
Target Start/End: Original strand, 20385659 - 20385716
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    ||||||||||||| ||||||||||   |||| ||||| |||||||||||||| |||||    
T  20385659 ttaatcatttaaaatttcgtccctgagcccagttaattactgccacgtcactgattag 20385716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 32242332 - 32242388
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  32242332 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatt 32242388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 491 - 600
Target Start/End: Complemental strand, 15645108 - 15644999
Alignment:
Q  491 gggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcact 590  Q
    ||||||||||||| ||||||  |  |||| |||||||| ||||||||||    ||||||||||||||||||| ||||||||||   ||||||||||||||    
T  15645108 gggtcatttaaaaattggtttatgtattcgttaatcctgacattttgccctcccaaaatttaatcatttaaaatttcgtccctacacccacttaatcact 15645009  T
Q  591 gccacgtcac 600  Q
    ||||| ||||    
T  15645008 gccacatcac 15644999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 5993979 - 5994035
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  5993979 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 5994035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 485 - 605
Target Start/End: Original strand, 12904780 - 12904900
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccactta 584  Q
    |||||||| ||||||||||  |||| |||  |||| |||||||| ||| |||| |    ||||||||||| ||||||| |||||||||||| ||||||||    
T  12904780 aaatagggatcatttaaaaaatggtccctgtattcgttaatcctgacaatttgtcctcccaaaatttaataatttaaaatttcgtccctctccccactta 12904879  T
Q  585 atcactgccacgtcactaatt 605  Q
    |||| || |||||||||||||    
T  12904880 atcaatgtcacgtcactaatt 12904900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 35512238 - 35512294
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  35512238 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatt 35512294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 473 - 587
Target Start/End: Original strand, 5326071 - 5326185
Alignment:
Q  473 tttaatcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccc 572  Q
    ||||||||  |||||||||||||||||||||  |||| |||  |||| ||||||||  |||||||||  |||||||||||||| |||||| ||| || ||    
T  5326071 tttaatccctgcaaataggggtcatttaaaaaatggtccctgcattccttaatcctggcattttgccctttcaaaatttaatcttttaaaatttggttcc 5326170  T
Q  573 tcttcccacttaatc 587  Q
    ||  |||||||||||    
T  5326171 tccacccacttaatc 5326185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 5024356 - 5024300
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||||| |||||||||    
T  5024356 tttaatcatttaaaatttcgttcctctccccacttaatcactgccacatcactaatt 5024300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 11047527 - 11047583
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| |||||||||||||||||| ||||||||||    
T  11047527 tttaatcatttaaaatttcgtctctctccccacttaatcactgccatgtcactaatt 11047583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 13962954 - 13963010
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| | ||||||||||||| |||||||||||||    
T  13962954 tttaatcatttaaaatttcgtccctctcctcacttaatcactgtcacgtcactaatt 13963010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 14194761 - 14194705
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||| | ||||||||||    
T  14194761 tttaatcatttaaaatttcgtccctctccccacttaatcactgctatgtcactaatt 14194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 19892646 - 19892590
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||    
T  19892646 tttaatcatttaaaatttcgtcattctccccacttaatcactgccacgtcactaatt 19892590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 20840623 - 20840679
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||| ||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  20840623 tttaatgatttaaaattttgtccctctccccacttaatcactgccacgtcactaatt 20840679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 29646700 - 29646644
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||    
T  29646700 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatt 29646644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 38442158 - 38442214
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||| | |||||||    
T  38442158 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacataactaatt 38442214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 39453390 - 39453446
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||| || ||||||||||    
T  39453390 tttaatcatttaaaatttcgtccctctccccacttaatcactggcatgtcactaatt 39453446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 3529180 - 3529133
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  3529180 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 3529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 600
Target Start/End: Complemental strand, 24547463 - 24547412
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcac 600  Q
    |||||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  24547463 tttaatcatttaaaatttcgtccctctccccacttaaccactgccacgtcac 24547412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 297320 - 297274
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  297320 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 297274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 6758171 - 6758125
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  6758171 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6758125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 544 - 602
Target Start/End: Complemental strand, 14849050 - 14848992
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcacta 602  Q
    ||||||||||||||||||| ||| |||||||  ||||||||||||||||||| ||||||    
T  14849050 caaaatttaatcatttaaaatttggtccctcaccccacttaatcactgccacatcacta 14848992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 595
Target Start/End: Complemental strand, 38475337 - 38475291
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||    
T  38475337 tttaatcatttaaaatttcgtccctctccccacttaatcactgccac 38475291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 41930607 - 41930653
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  41930607 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 41930653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 548 - 605
Target Start/End: Original strand, 18247173 - 18247230
Alignment:
Q  548 atttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| | |||||||||||| ||||||||||||| |||| ||||||||||    
T  18247173 atttaatcatttagaatttcgtccctctccccacttaatcaccgccatgtcactaatt 18247230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 599
Target Start/End: Original strand, 20856995 - 20857072
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||  ||||||||| ||  |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||    
T  20856995 taatcctcccattttgcccctgtaaaagttaatcatttgaaatttcgtccctcttcccggttaatcactgccacgtca 20857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 599
Target Start/End: Original strand, 22869668 - 22869745
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||  ||||||||| ||  |||| |||| |||||||| ||||||||||||||||  ||||||||||||||||||    
T  22869668 taatcctcccattttgcccctgtaaaaattaaccatttaaaatttcgtccctcttcccggttaatcactgccacgtca 22869745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 599
Target Start/End: Complemental strand, 22870499 - 22870422
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||  ||||||||| ||  |||| ||||||||||||| ||||||| ||||||||  ||||||||||||||||||    
T  22870499 taatcctcccattttgcccctgtaaaaattaatcatttaaaatttcgtctctcttcccgattaatcactgccacgtca 22870422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 549 - 594
Target Start/End: Complemental strand, 28269726 - 28269681
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  28269726 tttaatcatttaaaatttcgtccctctccccacttaatcactgcca 28269681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 549 - 594
Target Start/End: Complemental strand, 28771176 - 28771131
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  28771176 tttaatcatttaaaatttcgtccctctccccacttaatcactgcca 28771131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 186509 - 186565
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||  |||||||||||||| ||| ||||||||||    
T  186509 tttaatcatttaaaatttcgtccctccccccacttaatcactaccatgtcactaatt 186565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 8322494 - 8322550
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||  |||||||||    
T  8322494 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcatttcactaatt 8322550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 16157193 - 16157137
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||| |||||||| ||||||||||| |||||| ||||||||||    
T  16157193 tttaatcatttaaaattttgtccctctccccacttaatccctgccatgtcactaatt 16157137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 17202489 - 17202545
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||| |||||||| ||||||||| || |||||||||||||||||| ||||||||||    
T  17202489 tttaagcatttaaaatttcgtccccctccccacttaatcactgccatgtcactaatt 17202545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 20814473 - 20814417
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||| |||||||| || ||||||||||||||| ||||||||||    
T  20814473 tttaatcatttaaaattttgtccctctccctacttaatcactgccatgtcactaatt 20814417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 550 - 594
Target Start/End: Complemental strand, 31482708 - 31482664
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  31482708 ttaatcatttaaaatttcgtccctctccccacttaatcactgcca 31482664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 27587238 - 27587285
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||||    
T  27587238 tttaatcatttaaaatttcgtccctctccccatttaatcactgccacg 27587285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 1506058 - 1506104
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  1506058 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 1506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 591
Target Start/End: Complemental strand, 35920522 - 35920480
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactg 591  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  35920522 tttaatcatttaaaatttcgtccctctccccacttaatcactg 35920480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 594
Target Start/End: Original strand, 6150544 - 6150589
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||    
T  6150544 tttaatcatttaaaatttcgtccctctccccacttaatcattgcca 6150589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 595
Target Start/End: Complemental strand, 20857584 - 20857511
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    |||||||  ||||||||| ||  |||| |||||||||| || ||||||||||||||||  ||||||||||||||    
T  20857584 taatcctcccattttgcccctgtaaaagttaatcatttgaaatttcgtccctcttcccggttaatcactgccac 20857511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 13362566 - 13362510
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||| ||| |||| |||||||||||||||| || |||||||||    
T  13362566 tttaatcatttaaaatttagtctctctccccacttaatcactgctacatcactaatt 13362510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 6150757 - 6150702
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  6150757 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 6150702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 11047774 - 11047719
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  11047774 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 11047719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 11761839 - 11761886
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||| ||| |||||||||||| |||||||    
T  11761839 tttaatcatttaaaatttcgtccatctccccacttaatcattgccacg 11761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 16156946 - 16157001
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  16156946 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 16157001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 20814226 - 20814281
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  20814226 ttaatcatttaaaatttcgtcctttaaccaacttaatcactgccacgtcactaatt 20814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 28269513 - 28269568
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  28269513 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 28269568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 39453636 - 39453581
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  39453636 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 39453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 43159151 - 43159096
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  43159151 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 43159096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 483 - 589
Target Start/End: Original strand, 14848763 - 14848869
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||||||||| ||||||||||  |||||  |  |||| ||||||||  |||||| ||    ||||||||||||||||||| ||| |||||||  ||||||    
T  14848763 gcaaatagggatcatttaaaaaatggtttgtgcattccttaatccttgcatttttccctcccaaaatttaatcatttaaaatttggtccctccccccact 14848862  T
Q  583 taatcac 589  Q
    |||||||    
T  14848863 taatcac 14848869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 549 - 595
Target Start/End: Original strand, 16083067 - 16083113
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccac 595  Q
    |||||||||||||| |||||| ||||| || ||||||||||||||||    
T  16083067 tttaatcatttaaaatttcgtacctctcccaacttaatcactgccac 16083113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 605
Target Start/End: Complemental strand, 27937347 - 27937301
Alignment:
Q  559 taaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||| ||| |||||||| |||||| ||||||||||||||||||||||    
T  27937347 taaaattttgtccctctccccactaaatcactgccacgtcactaatt 27937301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 594
Target Start/End: Original strand, 18670289 - 18670334
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| |||||||| ||| |||||||||||| |||||    
T  18670289 tttaatcatttaaaatttcgtccatctccccacttaatcattgcca 18670334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 801
Target Start/End: Original strand, 21978411 - 21978468
Alignment:
Q  745 aatcttccagaaccaacctccatgaaacattcttgctg-agcatcaaacccaacaacc 801  Q
    |||||||||||||||||||| |||||||| ||||| || |  ||||||||||||||||    
T  21978411 aatcttccagaaccaacctctatgaaacactcttgatgaattatcaaacccaacaacc 21978468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 6e-18; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 484 - 595
Target Start/End: Complemental strand, 13311436 - 13311325
Alignment:
Q  484 caaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccactt 583  Q
    |||||||||||||||||||   |||||| |  |||| |||||| ||||| ||||||  | ||||||||||| ||||||| |||||||||||| || ||||    
T  13311436 caaataggggtcatttaaacaatggttcatgtattcgttaatcttaacaatttgcccttccaaaatttaataatttaaaatttcgtccctctcccgactt 13311337  T
Q  584 aatcactgccac 595  Q
    ||||||||||||    
T  13311336 aatcactgccac 13311325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 533 - 607
Target Start/End: Original strand, 11397452 - 11397526
Alignment:
Q  533 ttttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||||||||| ||||||||||||||||||| ||| ||| ||| ||||| |||||||||| |||||||||||||||    
T  11397452 ttttgccactacaaaatttaatcatttaaaatttagtctctcatcccaattaatcactgtcacgtcactaattag 11397526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 483 - 604
Target Start/End: Original strand, 20563758 - 20563879
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||||||||||||||||||||||| || | | ||||   |||||||    |||||||||| ||||||||||||||||||| ||| ||| |||| |||| |    
T  20563758 gcaaataggggtcatttaaaatttagtccgtaaatttgctaatccttgttttttgccactacaaaatttaatcatttaaaatttagtctctctccccaat 20563857  T
Q  583 taatcactgccacgtcactaat 604  Q
    ||| ||| ||||||||||||||    
T  20563858 taaccaccgccacgtcactaat 20563879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 3914228 - 3914284
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  3914228 tttaatcatttaaaatttcgtccctcttccaacttaatcactgccacatcactaatt 3914284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 483 - 595
Target Start/End: Complemental strand, 11400372 - 11400261
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    ||||||| ||||||||||||||||||| ||| ||||  ||||||||    |||||||||| ||||||||||||||||||| |||  || |||| ||||||    
T  11400372 gcaaatatgggtcatttaaaatttggtccctgaatttgttaatccttgt-ttttgccactgcaaaatttaatcatttaaaatttattctctctccccact 11400274  T
Q  583 taatcactgccac 595  Q
    |||||||| ||||    
T  11400273 taatcacttccac 11400261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 28469346 - 28469290
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  28469346 tttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatt 28469290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 32053481 - 32053425
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  32053481 tttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatt 32053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 40379859 - 40379915
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  40379859 tttaatcatttaaaatttcgtccctctccccacttaatcaatgccacgtcactaatt 40379915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 42731509 - 42731565
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  42731509 tttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatt 42731565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 549 - 607
Target Start/End: Complemental strand, 5457245 - 5457187
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||||    
T  5457245 tttaatcatttaaaatttcgtccctcatcccagttaatcactgccacgtcactgattag 5457187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 483 - 597
Target Start/End: Complemental strand, 15714696 - 15714582
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    ||||||||||||||||||||| |||||  ||  |||| |||||||| ||||||||||    ||| ||||||||| ||||  |||||| ||||| || |||    
T  15714696 gcaaataggggtcatttaaaaattggtctctgcattccttaatcctgacattttgccctgccaagatttaatcacttaacatttcgttcctctccctact 15714597  T
Q  583 taatcactgccacgt 597  Q
    |||||||||||||||    
T  15714596 taatcactgccacgt 15714582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 27396933 - 27396883
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  27396933 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtca 27396883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 10935884 - 10935940
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||    
T  10935884 tttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatt 10935940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 45010688 - 45010744
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| |||||||| ||| |||||||||||||||||| ||||||||||    
T  45010688 tttaatcatttaaaatttcgtccatctccccacttaatcactgccaagtcactaatt 45010744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 17102110 - 17102157
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  17102110 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 17102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 27991829 - 27991876
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  27991829 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27991876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 597
Target Start/End: Original strand, 7354886 - 7355000
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    ||||||||||||||||||||| ||||| |||  |||| |||||| |  ||||||||| ||  |  ||||||||||||||| ||| |||||||  ||||||    
T  7354886 gcaaataggggtcatttaaaaattggtccctatattcgttaatcgtggcattttgcccctaaactatttaatcatttaaaatttggtccctccccccact 7354985  T
Q  583 taatcactgccacgt 597  Q
    |||| | ||||||||    
T  7354986 taattattgccacgt 7355000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 12644147 - 12644093
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  12644147 aaaaattaatcatttaaaatttcgtccctcttcccggttaatcactgccacgtca 12644093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 30948466 - 30948420
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  30948466 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30948420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 32680901 - 32680855
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  32680901 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 32680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 43124490 - 43124440
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  43124490 tttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtca 43124440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 45914610 - 45914664
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  45914610 aaaaattaatcatttaaaatttcgtccctcttcccgattaatcactgccacgtca 45914664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 599
Target Start/End: Original strand, 4226188 - 4226265
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||  ||||||||| ||  |||| ||||||||||||| |||||||| |||||||  ||||||||||||||||||    
T  4226188 taatccttccattttgcccctgtaaaaattaatcatttaaaatttcgtccttcttcccggttaatcactgccacgtca 4226265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 599
Target Start/End: Original strand, 12643163 - 12643240
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||  |||||| || || ||||| |||| |||||||| ||||||||||||||||  ||||||||||||||||||    
T  12643163 taatcctcccattttacccctgcaaaaattaaccatttaaaatttcgtccctcttcccgattaatcactgccacgtca 12643240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 45010942 - 45010893
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtc 598  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  45010942 tttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtc 45010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 2640516 - 2640460
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||| |||| ||||||||||||||| || ||||||||||    
T  2640516 tttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatt 2640460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 23181332 - 23181276
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||||||||| ||||||||||||  |||||||||||||| || ||||||||||    
T  23181332 tttaatcatttaaaatttcgtccctctctccacttaatcactgtcatgtcactaatt 23181276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 605
Target Start/End: Original strand, 24388909 - 24388965
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||||| ||||| |||||||||||| ||||||||||||||||||| |||| ||||    
T  24388909 tttaatcacttaaaatttcgtccctctccccacttaatcactgccacatcaccaatt 24388965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 545 - 605
Target Start/End: Original strand, 38643636 - 38643696
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||| ||||||||||||  |||||||||||| |||||||||| |||| |||||||||||||    
T  38643636 aaaaattaatcatttaagatttcgtccctctccccacttaattactgtcacgtcactaatt 38643696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 549 - 596
Target Start/End: Complemental strand, 32299043 - 32298996
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  32299043 tttaatcattgaaaatttcgtccctctccccacttaatcactgccacg 32298996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 34928956 - 34928910
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  34928956 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 34928910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 39686840 - 39686794
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||| |||||| |||||||||||| ||||||||||||||||||||    
T  39686840 ttaatcgtttaaaatttcgtccctctccccacttaatcactgccacg 39686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 545 - 607
Target Start/End: Complemental strand, 45915822 - 45915760
Alignment:
Q  545 aaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||| ||||||||||||| || |||||||||| ||  |||||||||||||||||||| |||||    
T  45915822 aaaaattaatcatttaaaattccgtccctctttccgattaatcactgccacgtcactgattag 45915760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 17886827 - 17886778
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    ||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  17886827 ttaatcatttaaaatttcgtcccttgacccacttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 594
Target Start/End: Complemental strand, 22871615 - 22871570
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgcca 594  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||    
T  22871615 tttaatcatttaaaatttcttccctctccccacttaatcactgcca 22871570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 605
Target Start/End: Original strand, 37656949 - 37656998
Alignment:
Q  556 atttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||| |||||||||||| ||||||||||||| | |||||||||||||    
T  37656949 atttaaaatttcgtccctctccccacttaatcaccggcacgtcactaatt 37656998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 599
Target Start/End: Original strand, 47558093 - 47558170
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtca 599  Q
    |||||||  ||||||||| ||  |||| |||| |||||||| ||||||||||||||||  |||||||||| |||||||    
T  47558093 taatcctcccattttgcccctgtaaaaattaaccatttaaaatttcgtccctcttcccgattaatcactgtcacgtca 47558170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 544 - 600
Target Start/End: Complemental strand, 20426673 - 20426617
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcac 600  Q
    |||| |||||||||||||| ||| ||||||| ||||||| || ||||||||||||||    
T  20426673 caaagtttaatcatttaaaatttagtccctcatcccactaaaccactgccacgtcac 20426617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 483 - 599
Target Start/End: Complemental strand, 32688622 - 32688506
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||| |||||||||||||||||||||| | |  | ||  ||||||| |||  |||||  | ||||  ||||||||||||| ||||||||||   ||||||    
T  32688622 gcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaatcatttaaaatttcgtcccttgacccact 32688523  T
Q  583 taatcactgccacgtca 599  Q
    |||| ||||||||||||    
T  32688522 taataactgccacgtca 32688506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 42019935 - 42019879
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||||| ||||||| ||||||| |||| | |||||||||||||||| ||||||||||    
T  42019935 tttaattatttaaaatttcgtctctctcctcacttaatcactgccatgtcactaatt 42019879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 2640269 - 2640324
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  2640269 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 2640324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 6253561 - 6253608
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| ||||||||||||  ||||||||||| |||||||    
T  6253561 tttaatcatttaaaatttcgtccctctctccacttaatcaatgccacg 6253608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 6571103 - 6571150
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| ||| |||||||| ||||||||||||||| ||||    
T  6571103 tttaatcatttaaaattttgtccctctccccacttaatcactgtcacg 6571150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Original strand, 17885719 - 17885774
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   |||| ||||||||||||||||||||||||    
T  17885719 ttaatcatttaaaatttcgtcctttgacccagttaatcactgccacgtcactaatt 17885774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 19204579 - 19204626
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| ||| |||||||| |||||||||||| |||||||    
T  19204579 tttaatcatttaaaattttgtccctctccccacttaatcattgccacg 19204626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 550 - 605
Target Start/End: Complemental strand, 42731756 - 42731701
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||| |||||||| |   || ||||||||||||||||||||||||||    
T  42731756 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatt 42731701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 473 - 607
Target Start/End: Complemental strand, 18670277 - 18670143
Alignment:
Q  473 tttaatcctggcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccc 572  Q
    ||||||||| |||| |||||||| |||||||  |||| |||  |||| ||||||||  || ||||||    |||| |||||||| ||||| ||| |||||    
T  18670277 tttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaagtttaatcacttaaaatttggtccc 18670178  T
Q  573 tcttcccacttaatcactgccacgtcactaattag 607  Q
    |   |||| ||||| |||||||||||||| |||||    
T  18670177 taagcccatttaattactgccacgtcactgattag 18670143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 605
Target Start/End: Complemental strand, 12229415 - 12229354
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||| |||||||||| ||| ||||||||||   |||||||||| |||||||||||| |||||    
T  12229415 caaagtttaatcattaaaaatttcgtcccttaacccacttaatgactgccacgtcattaatt 12229354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 600
Target Start/End: Original strand, 18855434 - 18855551
Alignment:
Q  483 gcaaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccact 582  Q
    |||||||||||||||||||||  |||| |||  | || |||||||||| | | | ||  ||||||| ||||||| ||||| ||||||||||   ||||||    
T  18855434 gcaaataggggtcatttaaaaaatggtccctataatcgttaatcctaaaaatctaccctttcaaaagttaatcaattaaaatttcgtcccttaacccact 18855533  T
Q  583 taatcactgccacgtcac 600  Q
    | || |||||||| ||||    
T  18855534 tgatgactgccacatcac 18855551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 603
Target Start/End: Original strand, 13672 - 13753
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaa 603  Q
    |||||||  ||||||||| ||  |||| ||||||||||||  |||||||||||| |||||||||||||| ||||||||||||    
T  13672 taatccttccattttgcccctataaaaattaatcatttaagatttcgtccctctccccacttaatcactaccacgtcactaa 13753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 607
Target Start/End: Complemental strand, 14630 - 14545
Alignment:
Q  522 taatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||||||  ||||||||| ||  |||| ||||||||||||  |||||||||||| ||||||||||||||||||| ||||| |||||    
T  14630 taatcctcccattttgcccctataaaaattaatcatttaagatttcgtccctctccccacttaatcactgccacatcactgattag 14545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 596
Target Start/End: Original strand, 1859 - 1906
Alignment:
Q  549 tttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  1859 tttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 1324 - 1370
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  1324 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 141900 - 141854
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  141900 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 596
Target Start/End: Original strand, 139763 - 139809
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  139763 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 139809  T

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Target: scaffold0295 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 548 - 605
Target Start/End: Original strand, 2232 - 2289
Alignment:
Q  548 atttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||| |||| |||||    
T  2232 atttaatcatttaaaattttgtccctctccccacttaatcactgccatgtcaataatt 2289  T

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Target: scaffold0205 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 596
Target Start/End: Complemental strand, 21275 - 21229
Alignment:
Q  550 ttaatcatttaaactttcgtccctcttcccacttaatcactgccacg 596  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||    
T  21275 ttaatcatttaaaattccgtccctctccccacttaatcactgccacg 21229  T

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Target: scaffold0181 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 546 - 606
Target Start/End: Original strand, 9294 - 9353
Alignment:
Q  546 aaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatta 606  Q
    ||||||||||| ||||| || |||||| || ||||||||||||||| ||||||||||||||    
T  9294 aaatttaatcacttaaaattccgtccc-ctccccacttaatcactgtcacgtcactaatta 9353  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 544 - 607
Target Start/End: Complemental strand, 239894 - 239831
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaattag 607  Q
    |||| |||||||||||||| ||||||||||   |||||||||| |||||||| ||||| |||||    
T  239894 caaagtttaatcatttaaaatttcgtccctacacccacttaattactgccacatcactgattag 239831  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 485 - 575
Target Start/End: Complemental strand, 31308 - 31218
Alignment:
Q  485 aaataggggtcatttaaaatttggttccttaattcattaatcctaacattttgccacttcaaaatttaatcatttaaactttcgtccctct 575  Q
    ||||| ||||||||||||| ||||| | |  |||| |||||  ||| ||||||||   |||||||||||||| ||||| ||||||||||||    
T  31308 aaatacgggtcatttaaaaattggtccatgtattccttaattataatattttgccctatcaaaatttaatcacttaaaatttcgtccctct 31218  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 602
Target Start/End: Complemental strand, 14133 - 14076
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcacta 602  Q
    ||||||||||||||||||| ||| |||||||  |||||||||||| || ||||||||||    
T  14133 caaaatttaatcatttaaaatttggtccctc-ccccacttaatcattgtcacgtcacta 14076  T

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Target: scaffold0220 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 605
Target Start/End: Original strand, 23316 - 23377
Alignment:
Q  544 caaaatttaatcatttaaactttcgtccctcttcccacttaatcactgccacgtcactaatt 605  Q
    |||| |||||||||||||| ||| ||  |||  ||||||||||||||||||||||| |||||    
T  23316 caaagtttaatcatttaaaatttggtttctccccccacttaatcactgccacgtcagtaatt 23377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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