View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0114_low_3 (Length: 307)

Name: NF0114_low_3
Description: NF0114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0114_low_3
NF0114_low_3
[»] chr5 (55 HSPs)
chr5 (12-307)||(1722339-1722634)
chr5 (159-307)||(18951289-18951437)
chr5 (159-307)||(36418390-36418538)
chr5 (163-293)||(6336133-6336263)
chr5 (162-307)||(20728517-20728662)
chr5 (173-307)||(32660199-32660333)
chr5 (159-295)||(14235554-14235688)
chr5 (180-293)||(32660266-32660379)
chr5 (173-307)||(19278705-19278838)
chr5 (159-295)||(13543604-13543740)
chr5 (163-307)||(20729034-20729169)
chr5 (173-284)||(36417886-36417997)
chr5 (158-307)||(5734448-5734596)
chr5 (162-307)||(18248947-18249092)
chr5 (175-307)||(5734971-5735102)
chr5 (176-248)||(36418389-36418461)
chr5 (163-284)||(26275494-26275615)
chr5 (178-307)||(30738249-30738377)
chr5 (162-303)||(31813886-31814017)
chr5 (173-236)||(32459427-32459490)
chr5 (181-303)||(30737748-30737870)
chr5 (173-235)||(35891263-35891325)
chr5 (159-224)||(26276012-26276077)
chr5 (178-262)||(18951368-18951452)
chr5 (163-263)||(35190446-35190546)
chr5 (178-248)||(20729033-20729103)
chr5 (240-298)||(35891260-35891318)
chr5 (159-307)||(13543070-13543221)
chr5 (181-285)||(35189922-35190025)
chr5 (212-295)||(6336329-6336412)
chr5 (185-236)||(18238339-18238390)
chr5 (180-248)||(18237919-18237987)
chr5 (240-307)||(18237919-18237986)
chr5 (240-307)||(32459434-32459501)
chr5 (241-307)||(30737748-30737814)
chr5 (159-267)||(13538455-13538563)
chr5 (240-292)||(36417893-36417945)
chr5 (240-307)||(6336150-6336217)
chr5 (178-229)||(19279239-19279290)
chr5 (240-307)||(38405585-38405652)
chr5 (178-248)||(1722964-1723034)
chr5 (176-229)||(32660322-32660375)
chr5 (162-263)||(38405569-38405670)
chr5 (178-245)||(13543594-13543661)
chr5 (173-216)||(23251658-23251701)
chr5 (240-307)||(26275511-26275578)
chr5 (176-235)||(30738261-30738320)
chr5 (173-248)||(34444914-34444989)
chr5 (176-223)||(35190426-35190473)
chr5 (245-307)||(18238328-18238390)
chr5 (269-307)||(35342326-35342364)
chr5 (240-293)||(19279235-19279288)
chr5 (176-225)||(35189976-35190025)
chr5 (240-292)||(13538476-13538528)
chr5 (223-287)||(18321223-18321287)
[»] chr8 (80 HSPs)
chr8 (160-305)||(25737090-25737235)
chr8 (158-307)||(8713830-8713979)
chr8 (159-307)||(9770785-9770933)
chr8 (162-307)||(23553343-23553488)
chr8 (163-307)||(30576659-30576803)
chr8 (176-307)||(39700887-39701018)
chr8 (162-307)||(31169484-31169628)
chr8 (174-307)||(36359901-36360034)
chr8 (178-307)||(25730122-25730252)
chr8 (177-307)||(44041287-44041417)
chr8 (170-307)||(8714353-8714490)
chr8 (159-307)||(16197014-16197162)
chr8 (159-295)||(29794269-29794405)
chr8 (159-307)||(39701392-39701540)
chr8 (163-293)||(45017934-45018062)
chr8 (177-249)||(4613803-4613875)
chr8 (180-307)||(25737608-25737736)
chr8 (176-284)||(40553261-40553369)
chr8 (159-293)||(36360088-36360222)
chr8 (160-295)||(9276995-9277129)
chr8 (159-266)||(29792558-29792665)
chr8 (173-295)||(4613739-4613861)
chr8 (173-307)||(43423092-43423225)
chr8 (159-305)||(45017732-45017878)
chr8 (163-307)||(43422847-43422991)
chr8 (176-284)||(43422920-43423028)
chr8 (188-295)||(6235747-6235851)
chr8 (159-284)||(14871369-14871496)
chr8 (178-248)||(5358647-5358717)
chr8 (162-307)||(16208689-16208834)
chr8 (159-235)||(13771878-13771954)
chr8 (176-248)||(29794256-29794328)
chr8 (181-248)||(13771425-13771492)
chr8 (240-307)||(35434329-35434396)
chr8 (173-307)||(39700823-39700958)
chr8 (159-307)||(9276467-9276616)
chr8 (162-295)||(40552750-40552883)
chr8 (241-305)||(13771868-13771932)
chr8 (188-295)||(14870954-14871060)
chr8 (162-253)||(36314700-36314791)
chr8 (175-248)||(34686896-34686969)
chr8 (159-223)||(23179033-23179096)
chr8 (180-295)||(23553879-23553994)
chr8 (173-248)||(35433896-35433971)
chr8 (173-292)||(40553313-40553432)
chr8 (178-236)||(9276994-9277052)
chr8 (159-284)||(11113536-11113661)
chr8 (180-277)||(43423062-43423159)
chr8 (176-284)||(6236251-6236359)
chr8 (180-248)||(8713912-8713980)
chr8 (159-307)||(30576137-30576285)
chr8 (240-307)||(4613746-4613813)
chr8 (181-248)||(9770784-9770851)
chr8 (173-235)||(35434341-35434403)
chr8 (181-243)||(40552829-40552891)
chr8 (159-284)||(9770546-9770671)
chr8 (159-224)||(11113729-11113794)
chr8 (177-293)||(9770624-9770731)
chr8 (239-307)||(41190330-41190398)
chr8 (240-307)||(5358649-5358716)
chr8 (177-248)||(16197092-16197163)
chr8 (181-248)||(16208688-16208755)
chr8 (176-235)||(25730134-25730193)
chr8 (176-235)||(25737620-25737679)
chr8 (240-307)||(34686897-34686964)
chr8 (240-307)||(36314706-36314773)
chr8 (173-224)||(40553261-40553312)
chr8 (173-236)||(44040822-44040884)
chr8 (240-307)||(45017753-45017820)
chr8 (234-292)||(11113551-11113609)
chr8 (241-307)||(29030177-29030243)
chr8 (241-307)||(40552769-40552835)
chr8 (176-225)||(9770674-9770723)
chr8 (184-248)||(9276553-9276617)
chr8 (241-305)||(36360136-36360200)
chr8 (240-307)||(23553927-23553994)
chr8 (241-295)||(13771425-13771479)
chr8 (240-290)||(29792594-29792644)
chr8 (163-285)||(41190292-41190413)
chr8 (181-238)||(23553876-23553933)
[»] chr6 (44 HSPs)
chr6 (159-307)||(11528035-11528183)
chr6 (159-307)||(17180129-17180277)
chr6 (159-303)||(20575398-20575542)
chr6 (163-307)||(32417459-32417603)
chr6 (163-307)||(32423300-32423444)
chr6 (163-284)||(2840065-2840186)
chr6 (181-285)||(32417537-32417641)
chr6 (181-285)||(32423378-32423482)
chr6 (173-284)||(2839625-2839736)
chr6 (162-284)||(9902278-9902400)
chr6 (165-307)||(10862577-10862720)
chr6 (163-284)||(11527526-11527647)
chr6 (162-307)||(16168681-16168826)
chr6 (160-307)||(24139498-24139644)
chr6 (159-284)||(16168451-16168576)
chr6 (163-307)||(17179614-17179758)
chr6 (159-267)||(20575677-20575783)
chr6 (177-248)||(17180128-17180199)
chr6 (176-284)||(16168644-16168752)
chr6 (247-307)||(17132205-17132265)
chr6 (159-307)||(32417703-32417851)
chr6 (159-307)||(32423544-32423692)
chr6 (173-236)||(9901959-9902022)
chr6 (224-294)||(20575600-20575670)
chr6 (176-234)||(20575600-20575658)
chr6 (184-284)||(9946718-9946818)
chr6 (176-248)||(17179687-17179759)
chr6 (177-233)||(32417593-32417649)
chr6 (176-248)||(32417702-32417774)
chr6 (177-233)||(32423434-32423490)
chr6 (176-248)||(32423543-32423615)
chr6 (240-295)||(2840114-2840169)
chr6 (240-307)||(10407316-10407383)
chr6 (181-307)||(10962746-10962872)
chr6 (244-307)||(9946755-9946818)
chr6 (240-307)||(11527543-11527610)
chr6 (240-307)||(16168472-16168539)
chr6 (177-235)||(10407313-10407371)
chr6 (240-305)||(2839632-2839697)
chr6 (238-307)||(9902315-9902384)
chr6 (176-224)||(9946718-9946766)
chr6 (181-249)||(10963161-10963229)
chr6 (187-235)||(17132217-17132265)
chr6 (213-249)||(24139038-24139074)
[»] chr7 (100 HSPs)
chr7 (159-307)||(27995047-27995195)
chr7 (161-295)||(39959196-39959330)
chr7 (162-295)||(28256482-28256615)
chr7 (162-307)||(33879506-33879651)
chr7 (178-294)||(21412931-21413047)
chr7 (160-307)||(20366528-20366675)
chr7 (159-307)||(5559093-5559243)
chr7 (163-295)||(19925340-19925472)
chr7 (163-307)||(5805028-5805172)
chr7 (159-307)||(5805584-5805731)
chr7 (162-284)||(31893489-31893611)
chr7 (163-307)||(21412856-21413000)
chr7 (159-307)||(23150625-23150773)
chr7 (162-307)||(36566267-36566412)
chr7 (159-284)||(5559631-5559755)
chr7 (183-305)||(29591047-29591171)
chr7 (159-307)||(20366035-20366181)
chr7 (163-307)||(34951218-34951361)
chr7 (173-292)||(1346480-1346599)
chr7 (173-307)||(35214806-35214941)
chr7 (173-307)||(21433144-21433278)
chr7 (181-307)||(33235042-33235168)
chr7 (173-295)||(40904691-40904813)
chr7 (180-307)||(1349139-1349269)
chr7 (176-293)||(36566341-36566458)
chr7 (176-273)||(33879480-33879577)
chr7 (162-287)||(34951472-34951597)
chr7 (159-295)||(19925091-19925226)
chr7 (163-307)||(35215314-35215458)
chr7 (176-263)||(40904754-40904841)
chr7 (177-295)||(1286374-1286492)
chr7 (162-284)||(41020137-41020258)
chr7 (163-248)||(27995569-27995654)
chr7 (159-284)||(31893236-31893361)
chr7 (158-284)||(22876867-22876992)
chr7 (178-248)||(28256558-28256628)
chr7 (172-284)||(8040160-8040271)
chr7 (180-248)||(10619867-10619935)
chr7 (176-248)||(31175946-31176018)
chr7 (173-225)||(33235564-33235616)
chr7 (173-284)||(1441446-1441557)
chr7 (224-307)||(4187680-4187763)
chr7 (224-307)||(10619851-10619934)
chr7 (241-304)||(21433328-21433391)
chr7 (168-307)||(42990495-42990634)
chr7 (178-248)||(20101887-20101956)
chr7 (178-284)||(34951415-34951521)
chr7 (162-251)||(8039652-8039741)
chr7 (181-293)||(21433278-21433391)
chr7 (176-285)||(31893437-31893537)
chr7 (163-284)||(39958677-39958798)
chr7 (176-248)||(1286433-1286505)
chr7 (176-248)||(5805101-5805173)
chr7 (180-248)||(23679520-23679587)
chr7 (159-307)||(33235542-33235690)
chr7 (182-293)||(4187515-4187626)
chr7 (178-236)||(4187691-4187749)
chr7 (178-236)||(19925339-19925397)
chr7 (178-248)||(20366527-20366597)
chr7 (177-251)||(21433208-21433282)
chr7 (202-307)||(31175947-31176052)
chr7 (180-245)||(39959186-39959251)
chr7 (163-295)||(1286806-1286936)
chr7 (163-295)||(20101813-20101943)
chr7 (159-295)||(23679533-23679659)
chr7 (176-220)||(28256954-28256998)
chr7 (240-307)||(1441483-1441550)
chr7 (178-248)||(5559173-5559244)
chr7 (240-307)||(8039670-8039737)
chr7 (173-307)||(20183769-20183903)
chr7 (159-229)||(1440992-1441062)
chr7 (162-272)||(5075337-5075446)
chr7 (178-276)||(19925170-19925267)
chr7 (173-235)||(28104297-28104359)
chr7 (238-307)||(31893255-31893324)
chr7 (163-224)||(36566526-36566587)
chr7 (239-307)||(1349202-1349270)
chr7 (180-248)||(6220365-6220432)
chr7 (243-307)||(29591107-29591171)
chr7 (240-307)||(22876904-22876970)
chr7 (240-307)||(39958694-39958761)
chr7 (240-307)||(40904698-40904765)
chr7 (269-307)||(42888995-42889033)
chr7 (236-305)||(5075351-5075420)
chr7 (163-276)||(28256958-28257071)
chr7 (240-307)||(1346487-1346554)
chr7 (240-307)||(28104304-28104371)
chr7 (241-292)||(34951527-34951578)
chr7 (277-307)||(4187626-4187656)
chr7 (176-235)||(29591057-29591118)
chr7 (240-293)||(1441013-1441066)
chr7 (180-229)||(4187573-4187622)
chr7 (180-289)||(6220384-6220492)
chr7 (239-292)||(6220440-6220493)
chr7 (179-224)||(10620239-10620284)
chr7 (179-220)||(19925230-19925271)
chr7 (179-248)||(21413099-21413167)
chr7 (162-307)||(21413100-21413244)
chr7 (176-229)||(33235097-33235150)
chr7 (243-307)||(42991058-42991122)
[»] chr2 (56 HSPs)
chr2 (173-307)||(27893551-27893685)
chr2 (176-293)||(30907136-30907253)
chr2 (160-295)||(30907061-30907195)
chr2 (173-295)||(31263924-31264046)
chr2 (159-303)||(30907308-30907453)
chr2 (173-292)||(16781054-16781174)
chr2 (162-307)||(34336023-34336168)
chr2 (176-284)||(31263987-31264095)
chr2 (173-307)||(36196494-36196626)
chr2 (173-299)||(34336272-34336398)
chr2 (162-307)||(11871741-11871886)
chr2 (162-284)||(27893023-27893145)
chr2 (159-276)||(37543101-37543218)
chr2 (181-295)||(8260392-8260506)
chr2 (162-248)||(42117196-42117282)
chr2 (177-285)||(34336226-34336334)
chr2 (174-286)||(34429681-34429793)
chr2 (170-284)||(39301837-39301951)
chr2 (173-307)||(31264149-31264285)
chr2 (180-284)||(32341459-32341564)
chr2 (173-284)||(41265258-41265369)
chr2 (240-292)||(27893041-27893093)
chr2 (180-248)||(27893550-27893618)
chr2 (205-284)||(20535967-20536046)
chr2 (177-248)||(31264148-31264219)
chr2 (173-284)||(37542948-37543057)
chr2 (159-225)||(21813191-21813257)
chr2 (240-305)||(15506052-15506117)
chr2 (162-307)||(19080617-19080762)
chr2 (159-284)||(39376159-39376283)
chr2 (188-293)||(39376351-39376456)
chr2 (176-224)||(5116907-5116955)
chr2 (176-248)||(19080691-19080763)
chr2 (234-307)||(20535502-20535576)
chr2 (160-217)||(13315808-13315865)
chr2 (176-233)||(15506048-15506105)
chr2 (163-224)||(16780928-16780989)
chr2 (240-305)||(34336326-34336391)
chr2 (240-305)||(34429687-34429752)
chr2 (239-307)||(30907079-30907147)
chr2 (159-236)||(20535487-20535565)
chr2 (241-307)||(31263932-31263998)
chr2 (159-295)||(32341378-32341515)
chr2 (238-307)||(32341397-32341466)
chr2 (238-307)||(37543130-37543199)
chr2 (178-242)||(39301381-39301444)
chr2 (181-224)||(20535967-20536010)
chr2 (173-220)||(41265108-41265155)
chr2 (181-226)||(5116963-5117008)
chr2 (241-286)||(5116963-5117008)
chr2 (181-250)||(19081055-19081124)
chr2 (240-285)||(21813212-21813257)
chr2 (267-307)||(3430830-3430870)
chr2 (163-219)||(15505943-15505999)
chr2 (177-217)||(37543100-37543140)
chr2 (197-249)||(45124263-45124315)
[»] chr1 (43 HSPs)
chr1 (163-307)||(27351041-27351185)
chr1 (159-295)||(34254485-34254621)
chr1 (159-307)||(44964064-44964211)
chr1 (181-293)||(44964018-44964130)
chr1 (173-307)||(10686704-10686838)
chr1 (162-307)||(17898838-17898983)
chr1 (160-307)||(48352732-48352879)
chr1 (162-276)||(11897831-11897945)
chr1 (176-291)||(17898794-17898909)
chr1 (173-296)||(29419050-29419173)
chr1 (159-274)||(39302711-39302826)
chr1 (181-307)||(1765918-1766044)
chr1 (173-284)||(10685848-10685959)
chr1 (202-284)||(49651014-49651096)
chr1 (181-285)||(35701450-35701553)
chr1 (241-307)||(8903269-8903335)
chr1 (164-274)||(49650564-49650674)
chr1 (181-248)||(8902829-8902896)
chr1 (183-248)||(1765763-1765828)
chr1 (207-307)||(8902795-8902895)
chr1 (181-284)||(1765881-1765984)
chr1 (162-235)||(2965480-2965553)
chr1 (163-224)||(4772161-4772222)
chr1 (159-248)||(8903268-8903357)
chr1 (176-224)||(4772650-4772698)
chr1 (240-292)||(39302753-39302805)
chr1 (173-284)||(27351548-27351659)
chr1 (240-307)||(49650580-49650647)
chr1 (178-247)||(34254564-34254633)
chr1 (191-296)||(35701400-35701504)
chr1 (176-229)||(44964022-44964075)
chr1 (180-259)||(4030310-4030390)
chr1 (240-292)||(4030310-4030362)
chr1 (181-224)||(49651014-49651057)
chr1 (241-307)||(2965499-2965565)
chr1 (241-307)||(11897850-11897916)
chr1 (177-235)||(44963903-44963961)
chr1 (159-248)||(39302317-39302406)
chr1 (238-290)||(39302336-39302388)
chr1 (240-307)||(10685855-10685922)
chr1 (269-307)||(26069789-26069827)
chr1 (181-295)||(44963847-44963961)
chr1 (240-289)||(27351603-27351652)
[»] scaffold0746 (2 HSPs)
scaffold0746 (174-307)||(525-658)
scaffold0746 (173-307)||(21-154)
[»] chr4 (71 HSPs)
chr4 (178-307)||(26329937-26330066)
chr4 (159-307)||(26329997-26330145)
chr4 (163-307)||(43098402-43098546)
chr4 (159-269)||(19631749-19631859)
chr4 (162-307)||(8408340-8408476)
chr4 (180-305)||(9320017-9320142)
chr4 (176-284)||(2788928-2789036)
chr4 (180-307)||(2788965-2789092)
chr4 (164-305)||(52181706-52181847)
chr4 (159-307)||(22025292-22025439)
chr4 (182-290)||(35046437-35046545)
chr4 (161-236)||(42116069-42116144)
chr4 (173-307)||(8408850-8408984)
chr4 (175-284)||(41735814-41735923)
chr4 (163-284)||(52183437-52183558)
chr4 (163-307)||(41735743-41735886)
chr4 (176-284)||(43098365-43098473)
chr4 (180-285)||(2909182-2909287)
chr4 (178-295)||(5387131-5387248)
chr4 (159-284)||(52865942-52866067)
chr4 (178-277)||(2788795-2788894)
chr4 (162-307)||(43098171-43098312)
chr4 (173-295)||(31229254-31229377)
chr4 (162-284)||(30543141-30543254)
chr4 (162-236)||(52567732-52567806)
chr4 (163-280)||(23085224-23085340)
chr4 (177-224)||(44916324-44916371)
chr4 (162-225)||(52866366-52866429)
chr4 (181-295)||(52568197-52568311)
chr4 (162-235)||(19632248-19632320)
chr4 (176-248)||(31229318-31229390)
chr4 (202-294)||(35046550-35046642)
chr4 (163-234)||(2508252-2508323)
chr4 (180-265)||(22025274-22025358)
chr4 (176-229)||(26329826-26329879)
chr4 (181-234)||(35046550-35046603)
chr4 (176-236)||(26329948-26330008)
chr4 (181-248)||(5387194-5387261)
chr4 (240-307)||(52567750-52567817)
chr4 (176-243)||(52568189-52568256)
chr4 (241-307)||(52568245-52568311)
chr4 (211-295)||(5387623-5387706)
chr4 (176-248)||(22025116-22025188)
chr4 (181-248)||(2508684-2508751)
chr4 (240-307)||(19631770-19631837)
chr4 (240-307)||(19632236-19632302)
chr4 (181-248)||(35023969-35024036)
chr4 (164-304)||(36890399-36890542)
chr4 (162-259)||(19681184-19681279)
chr4 (215-293)||(26329805-26329883)
chr4 (238-307)||(9320015-9320084)
chr4 (253-306)||(42115652-42115705)
chr4 (195-235)||(42115654-42115694)
chr4 (241-305)||(42116060-42116124)
chr4 (240-292)||(52183489-52183541)
chr4 (240-307)||(2788797-2788864)
chr4 (159-206)||(26329762-26329809)
chr4 (178-229)||(35046493-35046544)
chr4 (181-224)||(36890540-36890583)
chr4 (240-307)||(36890637-36890704)
chr4 (178-229)||(36890655-36890706)
chr4 (238-285)||(52866366-52866413)
chr4 (240-294)||(2508269-2508323)
chr4 (241-307)||(2508685-2508751)
chr4 (159-216)||(41735958-41736015)
chr4 (240-289)||(52865963-52866012)
chr4 (176-216)||(2788853-2788893)
chr4 (159-207)||(22025052-22025100)
chr4 (181-221)||(23085172-23085212)
chr4 (269-305)||(33693290-33693326)
chr4 (240-284)||(44916324-44916368)
[»] scaffold0070 (1 HSPs)
scaffold0070 (174-307)||(28545-28678)
[»] chr3 (26 HSPs)
chr3 (159-307)||(31247634-31247782)
chr3 (177-282)||(3087086-3087190)
chr3 (173-307)||(4276135-4276269)
chr3 (163-307)||(35555516-35555661)
chr3 (162-263)||(50530235-50530336)
chr3 (161-307)||(21376554-21376700)
chr3 (180-293)||(54456799-54456912)
chr3 (173-284)||(3088106-3088217)
chr3 (160-259)||(21377037-21377136)
chr3 (224-299)||(31247178-31247252)
chr3 (173-305)||(54456847-54456979)
chr3 (159-224)||(14629271-14629336)
chr3 (178-235)||(31247192-31247248)
chr3 (176-229)||(54456803-54456856)
chr3 (178-249)||(5505728-5505800)
chr3 (240-307)||(3088143-3088210)
chr3 (177-224)||(14964737-14964784)
chr3 (240-307)||(21377049-21377116)
chr3 (177-248)||(24707471-24707542)
chr3 (173-224)||(35555987-35556038)
chr3 (162-224)||(50530397-50530459)
chr3 (163-284)||(4276629-4276741)
chr3 (162-235)||(54456660-54456733)
chr3 (159-220)||(18745502-18745563)
chr3 (180-235)||(19153884-19153940)
chr3 (240-284)||(35555987-35556031)
[»] scaffold0019 (3 HSPs)
scaffold0019 (162-293)||(124132-124262)
scaffold0019 (159-307)||(124347-124495)
scaffold0019 (176-266)||(124328-124418)
[»] scaffold0041 (3 HSPs)
scaffold0041 (173-295)||(45205-45327)
scaffold0041 (176-263)||(45177-45264)
scaffold0041 (240-307)||(45253-45320)
[»] scaffold0027 (3 HSPs)
scaffold0027 (161-274)||(9896-10009)
scaffold0027 (162-284)||(9383-9505)
scaffold0027 (240-292)||(9938-9990)
[»] scaffold0374 (4 HSPs)
scaffold0374 (173-236)||(16173-16236)
scaffold0374 (159-228)||(16059-16128)
scaffold0374 (239-307)||(16597-16665)
scaffold0374 (180-235)||(16609-16664)


Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 12 - 307
Target Start/End: Original strand, 1722339 - 1722634
Alignment:
Q  12 atgagatggacatcatcactgtttgaaaattccttttagacttctaaaattgctctaagacactctaaaactaccatgtatcttcaacggtggttaacgt 111  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  1722339 atgagatgtacaacataactgtttgaaaattccttttagacttctaaaattgctctaagacactctaaaactaccatgtatcttcaacgccggttaacgt 1722438  T
Q  112 cgttcacttcttaagtgtcgttgcaaacatatttattatttatgcggggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcc 211  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||    
T  1722439 cgttcgcttcttaagtgtcgttgcaaacatatttattatttatgcggggccaaataccatgtttggtccttttagtttaacaaaattcacaagttagtcc 1722538  T
Q  212 tttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  1722539 tttaattttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagt 1722634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 18951289 - 18951437
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||| ||  ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  18951289 ggccaaataacacatttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaatt 18951388  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||| |||||||| ||| |||||||| ||||| |||||||||||    
T  18951389 ctcaagttagtcctttaagttttaaaagttttaaataggtcattttagt 18951437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 36418538 - 36418390
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||  | |||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||| || ||| | |||||||||||||||||||    
T  36418538 ggccaaatatgacgtttggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataatt 36418439  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
     |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  36418438 ttcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagt 36418390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 293
Target Start/End: Original strand, 6336133 - 6336263
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||| || ||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||| | ||||  ||    
T  6336133 aaataccattttcggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttcca 6336232  T
Q  263 agttaatcctttaaatttcaaaagtttcaaa 293  Q
    ||||| |||||||| ||||||||||||||||    
T  6336233 agttagtcctttaagtttcaaaagtttcaaa 6336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 20728517 - 20728662
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||  ||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| || || ||| | |||||||||| ||| |||||||    
T  20728517 caaataccacttttggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaacagaattctc 20728616  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| |||||||| ||| |||||||||||||| ||| |||||||    
T  20728617 aagttagtcctttaagttttaaaagtttcaaatatgtctttttagt 20728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 32660199 - 32660333
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||| ||||||||| ||| |||||  |||||| ||||||||||||| ||||||| || ||  |||||||||||| ||| ||||||||||||| ||||    
T  32660199 tttggtctttttagttttacataatttctaagttaatcctttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagttagtcct 32660298  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| |||||||||||||||||| |||||||||||    
T  32660299 ttaagtttcaaaagtttcaaataggtcattttagt 32660333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 159 - 295
Target Start/End: Original strand, 14235554 - 14235688
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||| ||| ||||||||||||||||||| | |||||| ||||||||||||||||||  ||||||||||| ||| | |||||||||||||| ||||    
T  14235554 ggccaaatatcatttttggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtttgacagaatt 14235653  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
    ||||||||| ||||||   ||||| ||||||||||||    
T  14235654 ctcaagttagtccttt--gtttcacaagtttcaaata 14235688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 180 - 293
Target Start/End: Original strand, 32660266 - 32660379
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 279  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||| |  ||||||||||||| |||||  |||||| |||||||| ||    
T  32660266 cttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagtt 32660365  T
Q  280 tcaaaagtttcaaa 293  Q
    ||||||||||||||    
T  32660366 tcaaaagtttcaaa 32660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 19278705 - 19278838
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    |||| |||||||||||||||| |||| | ||||||||||||||| |||||||| |||||| ||| |||||||||||||||| |||||||||||||   ||    
T  19278705 tttgatccttttagtttgacagaattcttaagttagtcctttaaatttcaaaa-ttttaattagcttcttttagtttgacagaattctcaagttacctct 19278803  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| |||||| | |||||||||| ||||||||||    
T  19278804 ttaagtttcaataatttcaaataaatcattttagt 19278838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 295
Target Start/End: Complemental strand, 13543740 - 13543604
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  |||  || ||||||||||||| |||| |||| |||||  ||||| ||||||||||||| || |||| |||||||||||  | ||||    
T  13543740 ggccaaataccacttttactctttttagtttgacagaattctcaaattagttttttaaatttcaaaagtttttaacagatccttttagtttggaagaatt 13543641  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
    || ||||||||||||||||||||||||||||||||||    
T  13543640 cttaagttaatcctttaaatttcaaaagtttcaaata 13543604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 307
Target Start/End: Complemental strand, 20729169 - 20729034
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| || |||||||||||||||||||| |||||| ||||||||||||||||| |||         ||||||||| |||||||||||||| |||| |||    
T  20729169 aaatatcacgtttggtccttttagtttgataaaattatcaagttagtcctttaaattt---------taaatagatccttttagtttgacagaattttca 20729079  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||||||| |||||||||||||| ||| |||||||    
T  20729078 agttagtcctttaaattttaaaagtttcaaataggtccttttagt 20729034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 36417886 - 36417997
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    |||| |||||||||||| ||| |||| ||||||||||||||||| |||| ||||||| || ||| ||||||| |||||||||||||||||||||| ||||    
T  36417886 tttgatccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttagtcct 36417985  T
Q  273 ttaaatttcaaa 284  Q
    |||| |||||||    
T  36417986 ttaagtttcaaa 36417997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 307
Target Start/End: Original strand, 5734448 - 5734596
Alignment:
Q  158 gggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataat 257  Q
    |||||||||| ||||||||||||||||| ||||||  |||||| |||||| | ||||||||||  ||||||| || ||  |  ||||| ||||||| |||    
T  5734448 gggccaaatatcatgtttggtccttttaatttgactgaatttttaagttacttctttaagttttgaaagtttcaattatgtcattttaatttgacagaat 5734547  T
Q  258 tctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||  ||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  5734548 tcctaagtt-atcctttaagttttaaaagtttcaaataagtcattttagt 5734596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 18248947 - 18249092
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||  ||||||||||||||||||| | |||||| |||||| || |||| ||||  |||||||||| ||  | |||||||||| ||| |||||||    
T  18248947 caaataccacttttggtccttttagtttgatagaatttttaagttaatcttttacgttttgaaagttttaactatgtccttttagtttaacagaattctc 18249046  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| || ||||| |||||||||||| ||||| ||| |||||||    
T  18249047 aagttagtcatttaagtttcaaaagttttaaataggtctttttagt 18249092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 175 - 307
Target Start/End: Complemental strand, 5735102 - 5734971
Alignment:
Q  175 tggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttt 274  Q
    |||||||||||||||||   |||| ||||||||||| ||||| |||| ||| |||||| ||  | |||||||||| ||| ||||||||||||| ||||||    
T  5735102 tggtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctcaagttagtccttt 5735003  T
Q  275 aaatttcaaaagtttcaaataagtcattttagt 307  Q
     || ||||||||||||||||| |||||||||||    
T  5735002 -aagttcaaaagtttcaaataggtcattttagt 5734971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 36418461 - 36418389
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | |||||||||    
T  36418461 ggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 36418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 284
Target Start/End: Original strand, 26275494 - 26275615
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| || ||||||| |||||||||||||| |||||  |||||||| ||||||||||||||||||| ||||||||  ||||||||||||  ||||| ||    
T  26275494 aaatatcacgtttggtacttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattccca 26275593  T
Q  263 agttaatcctttaaatttcaaa 284  Q
    ||||| || || || |||||||    
T  26275594 agttagtcattcaagtttcaaa 26275615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 30738377 - 30738249
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 277  Q
    |||||||||||||||| |||||  ||||||||  |||||||||| ||| |||||| ||| |  ||||| ||||||| ||||||||||||  |||||||      
T  30738377 tccttttagtttgacagaatttcgaagttagtattttaagtttcgaaa-ttttaattaggtcattttaatttgacagaattctcaagtttgtcctttatg 30738279  T
Q  278 tttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||| |||||||||||    
T  30738278 tttcaaaagtttcaaatatgtcattttagt 30738249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 303
Target Start/End: Complemental strand, 31814017 - 31813886
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||||||| |||||||||||||||||||||| ||||  |||||||||| ||||||||||         ||||||| | ||||||||||||| |||||||    
T  31814017 caaataccacgtttggtccttttagtttgacagaattcccaagttagtcatttaagtttc---------aaatagact-ttttagtttgacagaattctc 31813928  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattt 303  Q
    ||||   || ||| ||||||||||||||||||||||||||||    
T  31813927 aagtatgtcattttaatttcaaaagtttcaaataagtcattt 31813886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 32459427 - 32459490
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  32459427 tttggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaatag 32459490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 30737748 - 30737870
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||| ||||||| |||| |||||||| || ||||| |||| ||||||| || ||  |  ||||||||||||||||||||||| ||| || ||||| |||    
T  30737748 ttttaatttgacagaattctcaagttaatcatttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtcttttaagttt 30737847  T
Q  281 caaaagtttcaaataagtcattt 303  Q
    ||||||||| |||||||||||||    
T  30737848 caaaagttttaaataagtcattt 30737870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 35891325 - 35891263
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  35891325 tttgatccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaata 35891263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 26276077 - 26276012
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  26276077 ggccaaataccacttttgatccttttagtttgacaaaatttccaagttagtcctttaagtttcaaa 26276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 262
Target Start/End: Original strand, 18951368 - 18951452
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    |||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||| |  ||||||||||| | ||||||||    
T  18951368 tccttttagtttgatagaattctcaagttagtcctttaagttttaaaagttttaaataggtcattttagtttgatagaattctca 18951452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 35190546 - 35190446
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| || |||||||||||||| ||||||| ||||||||||||| | ||||||||||  ||||||| || ||| | |||||||||||||| ||||||||    
T  35190546 aaatatcacgtttggtccttttaatttgacagaattttcaagttacttctttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctca 35190447  T
Q  263 a 263  Q
    |    
T  35190446 a 35190446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 20729103 - 20729033
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||| | |||||||||    
T  20729103 tccttttagtttgacagaattttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagtt 20729033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 35891318 - 35891260
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagt 298  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  35891318 cttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaataagt 35891260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 13543070 - 13543221
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||| ||||  ||||||||||||||||||||| ||||   |||||| | ||||||||||| ||||||| || ||| |  |||||||||||   ||||    
T  13543070 ggccaaagaccacttttggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatt 13543169  T
Q  259 ctcaag---ttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
      ||||   ||| |||||||| |||||||||||||||||| |||||||||||    
T  13543170 tccaagttattagtcctttaagtttcaaaagtttcaaatatgtcattttagt 13543221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 35189922 - 35190025
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||| ||||| | |||| ||||||||||| |||||||||| |||||||||||||| |  ||||||||||||| || || ||||||| |||||||| |||    
T  35189922 ttttaatttgatagaattctcaagttagtc-tttaagtttcgaaagttttaaataggtcattttagtttgacagaactcccaagttagtcctttaagttt 35190020  T
Q  281 caaaa 285  Q
    |||||    
T  35190021 caaaa 35190025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 295
Target Start/End: Complemental strand, 6336412 - 6336329
Alignment:
Q  212 tttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
    |||||||||| ||||||| || |||||||||||| |||| || |||||  |||||| |||||||||||||||| ||||||||||    
T  6336412 tttaagtttcgaaagtttcaattagattcttttaatttgtcagaattcctaagttagtcctttaaatttcaaatgtttcaaata 6336329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 18238390 - 18238339
Alignment:
Q  185 agtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaatag 18238339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 18237919 - 18237987
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||  | |||||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagtt 18237987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 18237919 - 18237986
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||| | ||||||||||||||| ||| |||||||| ||||||||| |||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagt 18237986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 32459434 - 32459501
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| ||||| ||||||| || ||||| |||||||||||| ||||| |||||||||||    
T  32459434 cttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagt 32459501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 30737748 - 30737814
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| ||||||| |||||||||||||||| |||||||||| |||||||||| || ||| |||||||    
T  30737748 ttttaatttgacagaattctcaagttaatcatttaaatttcgaaagtttcaattacgtctttttagt 30737814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 267
Target Start/End: Original strand, 13538455 - 13538563
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||| ||||  ||||||||||||||||||||| ||||   |||||||||||||| ||||| ||||||| || ||| |   |||||||||| | ||||    
T  13538455 ggccaaagaccacttttggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaatt 13538554  T
Q  259 ctcaagtta 267  Q
     ||||||||    
T  13538555 ttcaagtta 13538563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 36417893 - 36417945
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||    
T  36417893 cttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaa 36417945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 6336150 - 6336217
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||| || ||||  ||||||| |||||||| |||||||||||| ||||| |||||||||||    
T  6336150 cttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagt 6336217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 19279290 - 19279239
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    ||||||||||||||||||||| | ||||||||  ||||||||||||||||||    
T  19279290 tccttttagtttgacaaaattcttaagttagttttttaagtttcaaaagttt 19279239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 38405652 - 38405585
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||| ||| ||||| |||||||||| ||||| |||| |||||||||| || |||||||||||    
T  38405652 cttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagt 38405585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 1723034 - 1722964
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||| |||||||||  ||||||||  ||||||||| |||||||||||||| ||  ||||||||    
T  1723034 tccttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttttaaatatatcattttagtt 1722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 32660322 - 32660375
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    |||| ||||||||||||| ||||   ||||||||||||||||||||||||||||    
T  32660322 ggtcattttagtttgacagaattcctaagttagtcctttaagtttcaaaagttt 32660375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 38405670 - 38405569
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||| |||| |||||||||||| ||| ||||  ||||||| || |||||||||| ||||||| || ||  |  |||||||||| || |||||||    
T  38405670 caaataccatttttgatccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtttggcagaattctc 38405571  T
Q  262 aa 263  Q
    ||    
T  38405570 aa 38405569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 13543661 - 13543594
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattctttta 245  Q
    |||||||||||||  | |||| | |||||| |||||||| |||||||||||| |||||| ||||||||    
T  13543661 tccttttagtttggaagaattcttaagttaatcctttaaatttcaaaagtttcaaataggttctttta 13543594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 23251658 - 23251701
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaa 216  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||    
T  23251658 tttggtcctttaagtttgacaaaaatttcaggttagtcctttaa 23251701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 26275511 - 26275578
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| ||||   |||||| | |||||| ||||||||||||||||||  ||||||||||    
T  26275511 cttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagt 26275578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 30738320 - 30738261
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    |||| ||||| ||||||| |||| ||||||| |||||||| ||||||||||||| |||||    
T  30738320 ggtcattttaatttgacagaattctcaagtttgtcctttatgtttcaaaagtttcaaata 30738261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 34444914 - 34444989
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||| |||||||||||| | ||   ||||||||||||||||   || ||||||||||||||||| ||||    
T  34444914 tttggtcctttaagtttgacaaaaatatcggattagtcctttaagttttttaaattttaaatagattctttaagtt 34444989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 35190473 - 35190426
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaa 223  Q
    ||||||||||||||||||||||| |||| || ||| ||||||||||||    
T  35190473 ggtccttttagtttgacaaaattctcaaatttgtcttttaagtttcaa 35190426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 18238390 - 18238328
Alignment:
Q  245 agtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||| ||||  ||||||| || ||||| |||||||||||| ||||| |||||||||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagt 18238328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 35342364 - 35342326
Alignment:
Q  269 tcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  35342364 tcctttaagtttcaaaagtttcaaataagtccttttagt 35342326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 19279288 - 19279235
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaa 293  Q
    |||||||||||||| |||||| |||||| |  ||||| ||||||||||||||||    
T  19279288 cttttagtttgacaaaattcttaagttagttttttaagtttcaaaagtttcaaa 19279235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 35189976 - 35190025
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaa 225  Q
    |||| ||||||||||||| || |  |||||||||||||||||||||||||    
T  35189976 ggtcattttagtttgacagaactcccaagttagtcctttaagtttcaaaa 35190025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 13538476 - 13538528
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    ||||||||||||||||||||  |||||| |||||||  |||| ||||||||||    
T  13538476 cttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaa 13538528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 18321287 - 18321223
Alignment:
Q  223 aaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagt 287  Q
    ||||||| || ||| |||||||| ||||||| |||| | |||||| |||||||||||| ||||||    
T  18321287 aaagtttcaattaggttcttttaatttgacagaatttttaagttagtcctttaaattttaaaagt 18321223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 160 - 305
Target Start/End: Original strand, 25737090 - 25737235
Alignment:
Q  160 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 259  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||||    
T  25737090 gccaaataccatatttggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattc 25737189  T
Q  260 tcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
      |||||| ||||||||||||||||||||||| ||| |||||||||    
T  25737190 ctaagttagtcctttaaatttcaaaagtttcacatatgtcatttta 25737235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 158 - 307
Target Start/End: Original strand, 8713830 - 8713979
Alignment:
Q  158 gggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataat 257  Q
    |||| ||||||||  ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || || ||||||||||||||||| |||    
T  8713830 gggctaaataccacttttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaat 8713929  T
Q  258 tctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    || ||||||| || ||||| |||||||| |||||||||  ||||||||||    
T  8713930 tcacaagttagtcttttaagtttcaaaaatttcaaatagatcattttagt 8713979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 9770933 - 9770785
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || ||  |  ||||||||||||| ||||    
T  9770933 ggccaaataccacttttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaatt 9770834  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    | ||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  9770833 cccaagttagtcctttaattttcaaaagtttcaaataggtccttttagt 9770785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 23553343 - 23553488
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||||||||||||| |||||||||||||||| |||| |||| ||  ||||||||||||| ||||||| || ||| | |||||||||||||| |||||||    
T  23553343 caaataccatgtttgatccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctc 23553442  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||  || |||||||||||||||||||||||| |||||||||||    
T  23553443 aagttggtcttttaaatttcaaaagtttcaaataggtcattttagt 23553488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 163 - 307
Target Start/End: Complemental strand, 30576803 - 30576659
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    |||||| | ||||| |||||||||||||||| |||||||||||||||| | |||||||||||||||| || ||| | |||||||||||||| ||||| ||    
T  30576803 aaatactacgtttgatccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaattccca 30576704  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||    
T  30576703 agttagtcctttaagtttcaaaagttttaaatatgtcattttagt 30576659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 176 - 307
Target Start/End: Original strand, 39700887 - 39701018
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| |||||||| || ||  | |||||||||||||| |||||  ||||||||||||||    
T  39700887 ggtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagtttcaattatgtccttttagtttgacaaaattcctaagttaatccttta 39700986  T
Q  276 aatttcaaaagtttcaaataagtcattttagt 307  Q
    | |||||||||||||||||| |||||||||||    
T  39700987 agtttcaaaagtttcaaatatgtcattttagt 39701018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 162 - 307
Target Start/End: Complemental strand, 31169628 - 31169484
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||| || |||||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||  ||||||||||||  |||||||    
T  31169628 caaatatcacgtttggtcattttagtttgacaaaattctcaagttagtcctttaagttttaaa-gtttcaaatagatcattttagtttgacgaaattctc 31169530  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    || ||| |||||||| ||| |||||||||||||| |||||||||||    
T  31169529 aaattagtcctttaagttttaaaagtttcaaatatgtcattttagt 31169484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 174 - 307
Target Start/End: Original strand, 36359901 - 36360034
Alignment:
Q  174 ttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 273  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| || ||| |  ||||||||||||| ||||| ||||||| |||||    
T  36359901 ttggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacagaattcccaagttagtcctt 36360000  T
Q  274 taaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||| ||| |||||||||||||| |||||||||||    
T  36360001 taagttttaaaagtttcaaataggtcattttagt 36360034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 25730252 - 25730122
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat-agattcttttagtttgacataattctcaagttaatcctttaa 276  Q
    |||||||||||||| | ||||| ||||||||||||||||||||  ||||||| |||| || |  ||||| ||||||| ||||||||||||| ||||||||    
T  25730252 tccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcctttaa 25730153  T
Q  277 atttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||||||||| |||||||||||    
T  25730152 atttcaaaagtttcaaatatgtcattttagt 25730122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 177 - 307
Target Start/End: Complemental strand, 44041417 - 44041287
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| || ||  | |||||||||||||| |||||  |||||| || || ||    
T  44041417 gtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtttgacagaattcctaagttagtctttaaa 44041318  T
Q  277 atttcaaaagtttcaaataagtcattttagt 307  Q
     |||||||| |||||||||||||||||||||    
T  44041317 gtttcaaaaatttcaaataagtcattttagt 44041287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 170 - 307
Target Start/End: Complemental strand, 8714490 - 8714353
Alignment:
Q  170 atgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaat 269  Q
    ||||||| |||||||||||||| | ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| | ||||| ||||||| |    
T  8714490 atgtttgatccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagt 8714391  T
Q  270 cctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
      ||||| |||| ||||||| ||||| ||| |||||||    
T  8714390 tttttaagtttctaaagttttaaataggtctttttagt 8714353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 16197014 - 16197162
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||| |  |||||||||||| |||||||| |||| |||||||||||| ||||||||| ||||||| || ||  | |||||||||||||| ||||    
T  16197014 ggccaaatactacttttggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtttgacagaatt 16197113  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    | |||||||||| ||||| |||||||||| ||||||| ||| |||||||    
T  16197114 cccaagttaatcatttaagtttcaaaagtatcaaataggtccttttagt 16197162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 159 - 295
Target Start/End: Complemental strand, 29794405 - 29794269
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||| ||| ||||||| ||||||||||||| ||||  |||||||||||||||| |||| |||||||| | ||| | |||||||||||||||||||    
T  29794405 ggccaaatatcatttttggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataatt 29794306  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
      ||||||| || ||||| ||||||||||||||||||    
T  29794305 tccaagttagtcttttaagtttcaaaagtttcaaata 29794269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 39701540 - 39701392
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| || ||  | |||||||||||| | ||||    
T  39701540 ggccaaataccacgtttggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaatt 39701441  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    | ||  ||| || ||||| |||||||| ||||||||| ||| |||||||    
T  39701440 cccagattagtcatttaagtttcaaaactttcaaataggtccttttagt 39701392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 163 - 293
Target Start/End: Complemental strand, 45018062 - 45017934
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||  ||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| | |||||||||||||| | ||| ||    
T  45018062 aaataccacttttagtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtttgaca-agttc-ca 45017965  T
Q  263 agttaatcctttaaatttcaaaagtttcaaa 293  Q
    ||||| |||||||| |||||||| |||||||    
T  45017964 agttagtcctttaagtttcaaaaatttcaaa 45017934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 4613803 - 4613875
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagttt 249  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  4613803 gtccttttagtttgacaaaattttcgagttagtcctttaagtttcaaaagtttcaaatagattcttttagttt 4613875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 25737736 - 25737608
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat-agattcttttagtttgacataattctcaagttaatcctttaaat 278  Q
    |||||||||||| | ||||| ||||||||||||||||||||  ||||||| |||| || |  ||||| ||||||| ||||||||||||| ||||||||||    
T  25737736 cttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcctttaaat 25737637  T
Q  279 ttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||  ||||||||||    
T  25737636 ttcaaaagtttcaaatatttcattttagt 25737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 40553369 - 40553261
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||||||| || | | | |||||||||||||| |||||||||||||||| ||||    
T  40553369 ggtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 40553270  T
Q  276 aatttcaaa 284  Q
    | |||||||    
T  40553269 agtttcaaa 40553261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 293
Target Start/End: Complemental strand, 36360222 - 36360088
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  ||||||| ||||||||||||| ||||| |||||||||| |||||||||| ||||||| |||||  |  ||||| ||||||| ||||    
T  36360222 ggccaaataccaattttggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaatt 36360123  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaa 293  Q
      ||||||| |||||||| ||||||||||||||||    
T  36360122 gccaagttagtcctttaagtttcaaaagtttcaaa 36360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 295
Target Start/End: Complemental strand, 9277129 - 9276995
Alignment:
Q  160 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 259  Q
    ||||||||||| ||| | || ||||||||||||| ||||  |||||||||| |||||||||| ||||||| || ||||| |||||||||||| | ||||     
T  9277129 gccaaataccacgtt-gatcattttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaattt 9277031  T
Q  260 tcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
     ||||||| |||||||| ||||||||||||||||||    
T  9277030 ccaagttagtcctttaagtttcaaaagtttcaaata 9276995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 29792665 - 29792558
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||| ||| ||||||||||||||||| ||||  ||| |||||||||||| |||| |||||||  | ||||| |||||||||||||||||||    
T  29792665 ggccaaataccatttttagtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtttgacataatt 29792566  T
Q  259 ctcaagtt 266  Q
    ||||||||    
T  29792565 ctcaagtt 29792558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 4613739 - 4613861
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||| | ||||||||||||| |||||||| |||  ||||||| || ||  | |||||||||||||| |||| || ||||| ||||    
T  4613739 tttggtccttttagtttgaaagaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttcgagttagtcct 4613838  T
Q  273 ttaaatttcaaaagtttcaaata 295  Q
    |||| ||||||||||||||||||    
T  4613839 ttaagtttcaaaagtttcaaata 4613861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 43423225 - 43423092
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||| ||||   ||||||||  |||||||||| ||||||| || || | ||||||||||| | | ||||||||| ||| ||||    
T  43423225 tttggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaatta-agtcttttagtttcatagaattctcaatttactcct 43423127  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| |||||||||||||||||| |||||||||||    
T  43423126 ttaagtttcaaaagtttcaaataggtcattttagt 43423092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 305
Target Start/End: Original strand, 45017732 - 45017878
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||| |  ||||||||||||||||||| | ||||  ||||||||||||||||||||| ||||||| || ||  |  ||||||||| ||| ||||    
T  45017732 ggccaaatactacttttggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaatt 45017831  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    | ||| ||| ||||||||  ||||||| |||||||||||||||||||    
T  45017832 cccaaattagtcctttaagattcaaaaatttcaaataagtcatttta 45017878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 43422847 - 43422991
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||  |||| | |||||||||||| | |||| |||| ||||||||||||||||  ||||||| || ||| | |||||| |||  || ||||| ||    
T  43422847 aaataccacttttgattcttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattttagcaaaattccca 43422946  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||    
T  43422947 agttagtcctttaagtttcaaaagtttcaaataggtcattttagt 43422991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 176 - 284
Target Start/End: Original strand, 43422920 - 43423028
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    |||||||||| |||  |||||||  ||||||||||||||||||||||||||||| |||||| |  ||||||||||||| ||||  ||||||| |||||||    
T  43422920 ggtccttttattttagcaaaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagtccttta 43423019  T
Q  276 aatttcaaa 284  Q
    |||||||||    
T  43423020 aatttcaaa 43423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 6235747 - 6235851
Alignment:
Q  188 ttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa-gttaatcctttaaatttcaaaag 286  Q
    ||||||||||| |||||||||| ||||||||||||||    ||||||||||  ||||||||||||| |||||  || |||||||||||||||||||||||    
T  6235747 ttgacaaaattctcaagttagttctttaagtttcaaa----ttaaatagatcattttagtttgacagaattccgaaagttaatcctttaaatttcaaaag 6235842  T
Q  287 tttcaaata 295  Q
    |||||||||    
T  6235843 tttcaaata 6235851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 14871496 - 14871369
Alignment:
Q  159 ggccaaatacca-tgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttag-tttgacataa 256  Q
    |||||||||||| | ||||||||||| ||||||||| ||||   ||||||||| |||||||||| ||||||| || ||| ||||||||| ||||||||||    
T  14871496 ggccaaataccactttttggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataa 14871397  T
Q  257 ttctcaagttaatcctttaaatttcaaa 284  Q
    ||||||| ||| |||||||| |||||||    
T  14871396 ttctcaaattagtcctttaagtttcaaa 14871369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 5358647 - 5358717
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| | |||||||||    
T  5358647 tccttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagtt 5358717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 307
Target Start/End: Complemental strand, 16208834 - 16208689
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||||||| | ||| || ||||||||||||| |||| |||||||||| |||||||||| | |  ||| ||||||||  ||||||||| | | |||| ||    
T  16208834 caaataccacgattgatctttttagtttgacagaattctcaagttagttctttaagttttatagatttcaaatagatcattttagttttatagaattttc 16208735  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| |||||| | |||||||||||||||||| ||| |||||||    
T  16208734 aagttagtcctttgagtttcaaaagtttcaaatatgtccttttagt 16208689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 13771954 - 13771878
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    ||||||||||||| ||||||| ||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||    
T  13771954 ggccaaataccatttttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaata 13771878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 29794328 - 29794256
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||| |||||||||    
T  29794328 ggtccttttagtttgacataatttccaagttagtcttttaagtttcaaaagtttcaaatagatccttttagtt 29794256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 13771425 - 13771492
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagtt 13771492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 35434396 - 35434329
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||| |||||||||||    
T  35434396 cttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagt 35434329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 39700823 - 39700958
Alignment:
Q  173 tttggtccttttagttt-gacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 271  Q
    |||| |||||||||||| ||||||||| | | ||||||| |||||||||  ||||||| || ||| | |||||||||||||| |||||| |||||| |||    
T  39700823 tttgctccttttagttttgacaaaattcttatgttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagttagtcc 39700922  T
Q  272 tttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| ||| ||||||||||| || ||| |||||||    
T  39700923 tttaagttttaaaagtttcaattatgtccttttagt 39700958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 9276467 - 9276616
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataat 257  Q
    ||||||||| ||  |||||||||||||||||||||||||| ||||  |||| |||| ||||||  ||||||| || ||| |  || |||||||||| |||    
T  9276467 ggccaaatatcacttttggtccttttagtttgacaaaattctcaaaatagttcttttaagttttgaaagtttcaattaggtctttatagtttgacagaat 9276566  T
Q  258 tctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||| ||  |||| ||| |||||||||||||| ||| |||||||    
T  9276567 tctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagt 9276616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 40552750 - 40552883
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||||||| |||| ||| ||||||||||||| ||||||||||||| || ||||| |||  ||||||| || ||   | ||||||||||||| |||| ||    
T  40552750 caaataccacgtttcgtcgttttagtttgacagaattttcaagttaatcatttaaattttgaaagtttcaattaagatattttagtttgacaaaattttc 40552849  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaata 295  Q
    ||||||  | |||||||||||||| |||||||||    
T  40552850 aagttagccatttaaatttcaaaaatttcaaata 40552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 13771932 - 13771868
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||| |||||||||    
T  13771932 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcatttta 13771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 14870954 - 14871060
Alignment:
Q  188 ttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagt 287  Q
    |||||| |||||||||||||||| ||||| ||||||||| || ||||| || || ||| ||||||| |||||  |||||| |||||||||||| ||||||    
T  14870954 ttgacagaattttcaagttagtc-tttaaatttcaaaagattcaaataaatcctcttaatttgacagaattcataagttagtcctttaaattttaaaagt 14871052  T
Q  288 ttcaaata 295  Q
    ||||||||    
T  14871053 ttcaaata 14871060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 36314791 - 36314700
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgaca 253  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||| ||||| |||| ||||||| || ||  | ||||||||||||||    
T  36314791 caaataccacttttggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtttgaca 36314700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 34686969 - 34686896
Alignment:
Q  175 tggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||| ||||||| |||| ||||||||||||||||| ||| ||||||||||||||| | |||||||||    
T  34686969 tggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagtt 34686896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 23179033 - 23179096
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaa 223  Q
    ||||||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||    
T  23179033 ggccaaataccat-tttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 295
Target Start/End: Complemental strand, 23553994 - 23553879
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 279  Q
    |||||||||||||| |||| | ||||||||| |||||||||| || ||||||| ||  |  ||||||||||| | ||||||||||||| | | | || ||    
T  23553994 cttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagtt 23553895  T
Q  280 tcaaaagtttcaaata 295  Q
    ||||||||||||||||    
T  23553894 tcaaaagtttcaaata 23553879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 35433896 - 35433971
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||| ||||| | ||||  |||||||||| |||||||||||||||||||||||||||  ||||||||    
T  35433896 tttggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagtt 35433971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 292
Target Start/End: Complemental strand, 40553432 - 40553313
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||| ||||   || |||||||||| ||||| |||||||| ||  || | |||||||||||||| ||||   |||||| || |    
T  40553432 tttggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtctt 40553333  T
Q  273 ttaaatttcaaaagtttcaa 292  Q
    |||| |||||||||||||||    
T  40553332 ttaagtttcaaaagtttcaa 40553313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 9277052 - 9276994
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||    
T  9277052 tccttttagtttgatagaatttccaagttagtcctttaagtttcaaaagtttcaaatag 9276994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 11113536 - 11113661
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  || | |||||||||||||||| ||||   ||||||||||||||| |||  ||||||| ||  || | |||||||||||||| ||||    
T  11113536 ggccaaataccactttagatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatt 11113635  T
Q  259 ctcaagttaatcctttaaatttcaaa 284  Q
      ||||||| |||||||| |||||||    
T  11113636 tccaagttagtcctttaagtttcaaa 11113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 277
Target Start/End: Complemental strand, 43423159 - 43423062
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 277  Q
    |||||||||| | | |||| |||| ||| ||||||||||||||||||||| |||||| |  ||||||||||||| ||||| ||||||| | |||||||    
T  43423159 cttttagtttcatagaattctcaatttactcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagttagtactttaaa 43423062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 6236359 - 6236251
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    |||||||||||||| ||||||||  ||||||| | ||||||||||||| ||||| || ||| | |||||| ||||||| | ||| ||||||| | |||||    
T  6236359 ggtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagtacttta 6236260  T
Q  276 aatttcaaa 284  Q
    | |||||||    
T  6236259 agtttcaaa 6236251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 8713912 - 8713980
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||||||  ||||||||    
T  8713912 cttttagtttgacaaaattcacaagttagtcttttaagtttcaaaaatttcaaatagatcattttagtt 8713980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 30576137 - 30576285
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||| ||  ||||||| |||||| |||||| ||||  |||||||||||||||| |||  ||||||| || ||  | ||||||||||| || ||||    
T  30576137 ggccaaatatcacttttggtctttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatt 30576236  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
      ||||||| || ||||| ||| |||||||||||||  ||| |||||||    
T  30576237 tccaagttagtcttttaagtttgaaaagtttcaaattggtctttttagt 30576285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 4613746 - 4613813
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||| | |||| |||||||||||||||||||||  |||||||||| |||||| |||||||    
T  4613746 cttttagtttgaaagaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagt 4613813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 9770851 - 9770784
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||| ||||  |||||||||||||||| |||||||||||| |||||| | |||||||||    
T  9770851 ttttagtttgacagaattcccaagttagtcctttaattttcaaaagtttcaaataggtccttttagtt 9770784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 35434403 - 35434341
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    ||||||||||||||||||||| ||||   |||||| ||||||||||||||||||||| |||||    
T  35434403 tttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaaata 35434341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 181 - 243
Target Start/End: Original strand, 40552829 - 40552891
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttt 243  Q
    |||||||||||||||||||||||||||| | ||||| |||||||| ||| |||||| ||||||    
T  40552829 ttttagtttgacaaaattttcaagttagccatttaaatttcaaaaatttcaaataggttcttt 40552891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 9770546 - 9770671
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||| ||||||  |||| ||||| ||| |||||| ||||  ||||||| || |||||||||| ||||||| || ||  | |||||||||||| | ||||    
T  9770546 ggccagataccacttttgctccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaatt 9770645  T
Q  259 ctcaagttaatcctttaaatttcaaa 284  Q
    ||||||||| || ||||| |||||||    
T  9770646 ctcaagttagtcatttaagtttcaaa 9770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 11113794 - 11113729
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||||||| ||||||||||||| ||||||||||||  |||  ||||| |||||||||||||    
T  11113794 ggccaaataccatttttggtccttttaatttgacaaaattcccaaactagtcttttaagtttcaaa 11113729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 9770624 - 9770731
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 276  Q
    ||||||||||||||| | |||| ||||||||||| |||||||||||||         ||| | |||||||||||||| |||||  |||||| ||||||||    
T  9770624 gtccttttagtttgagagaattctcaagttagtcatttaagtttcaaa---------taggtccttttagtttgacagaattccgaagttagtcctttaa 9770714  T
Q  277 atttcaaaagtttcaaa 293  Q
     |||||||| |||||||    
T  9770715 gtttcaaaaatttcaaa 9770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 41190398 - 41190330
Alignment:
Q  239 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||||| ||||||||| ||| | ||||||||||| ||| |||||| || |||||||||||    
T  41190398 tcttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagt 41190330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 5358649 - 5358716
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||| |||||||| ||||| || |||||||||||| ||||| ||| |||||||    
T  5358649 cttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagt 5358716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 16197092 - 16197163
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||||||| ||||  ||||||| || |||||||||||||||| | |||||| | |||||||||    
T  16197092 gtccttttagtttgacagaattcccaagttaatcatttaagtttcaaaagtatcaaataggtccttttagtt 16197163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 16208755 - 16208688
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||| | | |||||||||||||||||||| |||||||||||||| |||||  | |||||||||    
T  16208755 ttttagttttatagaattttcaagttagtcctttgagtttcaaaagtttcaaatatgtccttttagtt 16208688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 25730193 - 25730134
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    |||| ||||| ||||||| |||| ||||||||||||||||| |||||||||||| |||||    
T  25730193 ggtcattttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaata 25730134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 25737679 - 25737620
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    |||| ||||| ||||||| |||| ||||||||||||||||| |||||||||||| |||||    
T  25737679 ggtctttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaata 25737620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 34686964 - 34686897
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| ||||||| |||| |||||||| |||||||||||| |||||||| ||||| ||| |||||||    
T  34686964 cttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagt 34686897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 36314773 - 36314706
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||| |||||||| || |||||||||| |||||||||| || ||| |||||||    
T  36314773 cttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagt 36314706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 40553312 - 40553261
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||||||||||||||| |||| |||||||| || |||||||||||||    
T  40553312 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 40553261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 44040822 - 44040884
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    ||||||||||||||||| ||| ||||| ||| |||| | |||||||||||||||||||||||||    
T  44040822 tttggtccttttagtttaacagaatttacaaattag-cttttaagtttcaaaagttttaaatag 44040884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 45017753 - 45017820
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||| | ||||| ||||||| |||||||| |||| |||||||||| || |||||||||||    
T  45017753 cttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagt 45017820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 11113551 - 11113609
Alignment:
Q  234 tagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    ||||| ||||||||||||||||||||  |||||| ||||||||||||  ||||||||||    
T  11113551 tagatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaa 11113609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 29030243 - 29030177
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||||   ||||| |||||||| |||| |||||||||| |||||| |||||||    
T  29030243 ttttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtccttttagt 29030177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 40552769 - 40552835
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||| |||| ||||||||||| |||||||||  |||||||||| ||||  ||||||||    
T  40552769 ttttagtttgacagaattttcaagttaatcatttaaattttgaaagtttcaattaagatattttagt 40552835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 9770674 - 9770723
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaa 225  Q
    |||||||||||||||||| ||||   ||||||||||||||||||||||||    
T  9770674 ggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaa 9770723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 9276553 - 9276617
Alignment:
Q  184 tagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||| |||| |||||||||||  |||||||| |||||||| |||||| | |||||||||    
T  9276553 tagtttgacagaattctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagtt 9276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 36360200 - 36360136
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    ||||||||||||| ||||  ||||||| || ||||| |||| ||||||||||||||||| |||||    
T  36360200 ttttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtcttttta 36360136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 23553994 - 23553927
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||||| |||||| || ||||| |||| || |||| || ||||||||||||||    
T  23553994 cttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagt 23553927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 13771425 - 13771479
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
    ||||||||||||| |||| |||||||| || ||||| ||| ||||||||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaata 13771479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 29792644 - 29792594
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttc 290  Q
    |||||||||||||| ||||| ||| ||| ||||||||||||| ||||||||    
T  29792644 cttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttc 29792594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 285
Target Start/End: Complemental strand, 41190413 - 41190292
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| || |||||||| ||||||||||||| |||| |||| ||||| |||||| |||| ||| ||| || ||| |  ||||||||||| | ||||||||    
T  41190413 aaatagcacgtttggtc-ttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctca 41190315  T
Q  263 agttaatcctttaaatttcaaaa 285  Q
    |  || || ||||| ||||||||    
T  41190314 atctagtcatttaagtttcaaaa 41190292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 23553933 - 23553876
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagat 238  Q
    ||||||||||| | |||| |||||||||| | | ||||||||||||||| ||||||||    
T  23553933 ttttagtttgatagaattctcaagttagttcctcaagtttcaaaagtttcaaatagat 23553876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 11528183 - 11528035
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||| | |||||||||||| ||||||||  |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| |    
T  11528183 ggccaaatacaacgtttggtcctttaagtttgaccgaattttcaagttagtcctttaagtttaaaaagtttcaaatatattcttttagtttgacataagt 11528084  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    | ||| |||||||||||| |||||||||||||||||| |||||||||||    
T  11528083 cccaacttaatcctttaagtttcaaaagtttcaaatatgtcattttagt 11528035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 17180277 - 17180129
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||| ||||||||||||||||| | | |||||| || ||| ||||||||||||| |||||||||| ||  | |||||||||||||||||||    
T  17180277 ggccaaataccatttttggtccttttagttttatataatttttaaattaatcctttaagtttcgaaagttttaattatgtccttttagtttgacataatt 17180178  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
     |||||||| |||||||| ||| ||||||||||||||  ||||||||||    
T  17180177 ttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagt 17180129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 159 - 303
Target Start/End: Original strand, 20575398 - 20575542
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||   |||||||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||| | ||||    
T  20575398 ggccaaataccactattggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtttgatagaatt 20575497  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattt 303  Q
      ||||||| |||||||| ||| |||||||||||||| |||||||    
T  20575498 tccaagttagtcctttaagttttaaaagtttcaaataggtcattt 20575542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 32417459 - 32417603
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||  |  ||||||||||||| |||| |||    
T  32417459 aaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttca 32417558  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| || ||||| |||||||||||| ||||| ||| |||||||    
T  32417559 agttagtcatttaagtttcaaaagttttaaatatgtccttttagt 32417603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 32423300 - 32423444
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||  |  ||||||||||||| |||| |||    
T  32423300 aaatatcatttttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttca 32423399  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| || ||||| |||||||||||| ||||| ||| |||||||    
T  32423400 agttagtcatttaagtttcaaaagttttaaatatgtccttttagt 32423444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 163 - 284
Target Start/End: Complemental strand, 2840186 - 2840065
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| || |||||||||||||||||| ||| |||| ||||||||||| ||||||||||||||||||  ||||||| |||||||||| ||| ||||||||    
T  2840186 aaatatcacgtttggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtttaacagaattctca 2840087  T
Q  263 agttaatcctttaaatttcaaa 284  Q
    |||||||| ||||| |||||||    
T  2840086 agttaatcatttaagtttcaaa 2840065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 32417537 - 32417641
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||||||| ||||  ||| ||| |||||||| |||    
T  32417537 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32417636  T
Q  281 caaaa 285  Q
    |||||    
T  32417637 caaaa 32417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 32423378 - 32423482
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||||||| ||||  ||| ||| |||||||| |||    
T  32423378 ttttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtcctttaagttt 32423477  T
Q  281 caaaa 285  Q
    |||||    
T  32423478 caaaa 32423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 2839625 - 2839736
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||| ||||| | |||| ||||||||||| |||||||||||||||||| || ||| | |||||| ||||||| ||||||||||||| ||||    
T  2839625 tttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcct 2839724  T
Q  273 ttaaatttcaaa 284  Q
    ||||||||||||    
T  2839725 ttaaatttcaaa 2839736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 9902400 - 9902278
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||| ||| |||||| |||||||||||||| |||||||||||||||| |||||||||| |||||||||| ||  | |||||||||||||||||||| |    
T  9902400 caaatatcatttttggttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataattccc 9902301  T
Q  262 aagttaatcctttaaatttcaaa 284  Q
     ||||| | |||||| |||||||    
T  9902300 gagttagttctttaagtttcaaa 9902278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 165 - 307
Target Start/End: Complemental strand, 10862720 - 10862577
Alignment:
Q  165 ataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaag 264  Q
    |||||| |||||||||||||||||||||| |||| |||||||||||||||||||||  ||||||| || ||  |  ||||||||||| | ||||| | ||    
T  10862720 ataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccag 10862621  T
Q  265 ttaatc-ctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||| ||  |||||||||||||||||||||||| ||| |||||||    
T  10862620 ttagtcattttaaatttcaaaagtttcaaataggtccttttagt 10862577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 284
Target Start/End: Original strand, 11527526 - 11527647
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||  ||||||||||||| ||||||| ||||   |||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||| ||    
T  11527526 aaataccacttttggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcaca 11527625  T
Q  263 agttaatcctttaaatttcaaa 284  Q
    ||||| |||||||| |||||||    
T  11527626 agttagtcctttaagtttcaaa 11527647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 307
Target Start/End: Complemental strand, 16168826 - 16168681
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||  |||| || ||||||||||||| ||||| ||| |||||| ||||||||||  |||||| || ||| | |||||||||||||| |||||||    
T  16168826 caaataccacttttgatctttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctc 16168727  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| ||  |||  |||||||||||||||||| ||| |||||||    
T  16168726 aagttagtctattacgtttcaaaagtttcaaataggtctttttagt 16168681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 307
Target Start/End: Complemental strand, 24139644 - 24139498
Alignment:
Q  160 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 259  Q
    |||||||| ||  |||| ||||||||||| |||| ||||  ||| ||||||||||||||||| |||||||||| ||  | |||||||||||| | ||||     
T  24139644 gccaaatatcaattttgatccttttagtt-gacataattcacaaattagtcctttaagtttcgaaagttttaattaagtccttttagtttgatagaatta 24139546  T
Q  260 tcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||| |||| |||||||| |||||||| ||||||||||||| |||||||    
T  24139545 tcaggttagtcctttaagtttcaaaaatttcaaataagtctttttagt 24139498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 16168451 - 16168576
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  ||||||||||||||||||| | |||| ||| |||||||||||||||||  ||||||| || ||| |  ||||||||||||| ||||    
T  16168451 ggccaaataccacttttggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtttgacagaatt 16168550  T
Q  259 ctcaagttaatcctttaaatttcaaa 284  Q
      ||||||| |||||||| |||||||    
T  16168551 tccaagttagtcctttaagtttcaaa 16168576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 17179614 - 17179758
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||| |||| | |||||| ||||||| ||||  |||| ||| | |||||||||| ||| |||||| ||| | | |||||||||| | |||| |||    
T  17179614 aaataccatatttgtttcttttattttgacagaattcacaaggtagccttttaagtttcgaaaattttaattaggtccctttagtttgatagaattttca 17179713  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| ||||||||||||||||| ||||||||| ||| |||||||    
T  17179714 agttagtcctttaaatttcaaaaatttcaaataggtccttttagt 17179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 20575783 - 20575677
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||| ||||||| ||||||||||||| |||| ||||||||||  |||||||||| |||||||||||||  | |||||||||||||| ||||    
T  20575783 ggccaaataccatttttggtc-ttttagtttgacagaattctcaagttagtt-tttaagtttcgaaagttttaaataagtccttttagtttgacaaaatt 20575686  T
Q  259 ctcaagtta 267  Q
    | |||||||    
T  20575685 cccaagtta 20575677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 17180199 - 17180128
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||  ||||||||    
T  17180199 gtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaaatagatcattttagtt 17180128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 16168752 - 16168644
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    |||||||||||||||||| |||| |||||||||||  ||| ||||||||||||| |||||| |  ||||||||||||  || || ||||||| || ||||    
T  16168752 ggtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagtttcaaataggtctttttagtttgactgaaatcccaagttagtctttta 16168653  T
Q  276 aatttcaaa 284  Q
    | |||||||    
T  16168652 agtttcaaa 16168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 307
Target Start/End: Complemental strand, 17132265 - 17132205
Alignment:
Q  247 tttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  17132265 tttgacagaattctcaagttaatcctttaagtttcaaaagattcaaataagtcatattagt 17132205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 32417851 - 32417703
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  |||| || ||||||||| ||| ||||  ||||||||| |||||| |||| ||||||| || ||| | |||| ||||||||| ||||    
T  32417851 ggccaaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatt 32417752  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
       |||||| || ||||| ||||| |||||||||||| ||| |||||||    
T  32417751 tctaagttagtcatttaagtttcagaagtttcaaataggtccttttagt 32417703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 32423692 - 32423544
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  |||| || ||||||||| ||| ||||  ||||||||| |||||| |||| ||||||| || ||| | |||| ||||||||| ||||    
T  32423692 ggccaaataccacttttgatctttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatt 32423593  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
       |||||| || ||||| ||||| |||||||||||| ||| |||||||    
T  32423592 tctaagttagtcatttaagtttcagaagtttcaaataggtccttttagt 32423544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 9901959 - 9902022
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    |||||||||||||||||| || ||||| ||||||||| |||| |||||||||||||||||||||    
T  9901959 tttggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaatag 9902022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 20575670 - 20575600
Alignment:
Q  224 aagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaat 294  Q
    |||||| |||||| | |||||||||||||| ||||| ||||||| |||||||| |||||||||||||||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 20575658 - 20575600
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat 234  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||    
T  20575658 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaat 20575600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 184 - 284
Target Start/End: Complemental strand, 9946818 - 9946718
Alignment:
Q  184 tagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaa 283  Q
    |||||||||| |||||  ||||||||||||||| | || ||||||| || ||| |  ||||||||||||||||||  ||| ||| |||||||||||||||    
T  9946818 tagtttgacataatttctaagttagtcctttaaatctcgaaagtttcaattaggtcattttagtttgacataatttccaaattagtcctttaaatttcaa 9946719  T
Q  284 a 284  Q
    |    
T  9946718 a 9946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 17179687 - 17179759
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||| |||||||||| | |||||||||||||||||||||| |||||||| ||| |||||| | |||||||||    
T  17179687 ggtccctttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagtt 17179759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 32417593 - 32417649
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaa 233  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||    
T  32417593 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaa 32417649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 32417774 - 32417702
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||| |||||||||||||||  ||||||||| ||||||||||| |||||| |||||| | |||||||||    
T  32417774 ggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagtt 32417702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 32423434 - 32423490
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaa 233  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||    
T  32423434 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaatttttaaa 32423490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 32423615 - 32423543
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||| |||||||||||||||  ||||||||| ||||||||||| |||||| |||||| | |||||||||    
T  32423615 ggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagtt 32423543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 2840169 - 2840114
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
    |||||||||| ||||||||||||||||| || ||||| ||||||||||||| ||||    
T  2840169 cttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaata 2840114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 10407316 - 10407383
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||||  | |||| | |||||| |||||||||||||||||| |||||||||||    
T  10407316 cttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaatatgtcattttagt 10407383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 10962746 - 10962872
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||||||||||||||||   |||||| ||  | ||||||| ||||||| || ||||| |||||| ||| | | ||||   || ||| |||||||| |||    
T  10962746 ttttagtttgacaaaattccaaagttattctgtaaagtttcgaaagtttcaattagatccttttattttaatagaatttctaaattagtcctttaagttt 10962845  T
Q  281 caaaagtttcaaataagtcattttagt 307  Q
     |||||||||||||| |||||||||||    
T  10962846 taaaagtttcaaatatgtcattttagt 10962872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 9946818 - 9946755
Alignment:
Q  244 tagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||   |||||| |||||||||| || |||||||||| || |||||||||||    
T  9946818 tagtttgacataatttctaagttagtcctttaaatctcgaaagtttcaattaggtcattttagt 9946755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 11527543 - 11527610
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| |||||||||||||  |||||| |||||||| |||| |||||||||| || ||| |||||||    
T  11527543 cttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagt 11527610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 16168472 - 16168539
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||| | |||||||| |||| |||||||| |||  |||||||||| || |||||||||||    
T  16168472 cttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagt 16168539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 10407313 - 10407371
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    ||||||||||||||||||||||   | |||| | ||||||||||||||||||| |||||    
T  10407313 gtccttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaaata 10407371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 2839632 - 2839697
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    |||||| ||||| | ||||||||||||| || ||||| ||||||||||||||| || ||| |||||    
T  2839632 cttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtcctttta 2839697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 9902384 - 9902315
Alignment:
Q  238 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||| |||| |||||||| || ||||| |||| ||||||| || || ||| |||||||    
T  9902384 ttcttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagt 9902315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 9946766 - 9946718
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    |||| ||||||||||||| ||||| ||| |||||||||||| |||||||    
T  9946766 ggtcattttagtttgacataatttccaaattagtcctttaaatttcaaa 9946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 10963229 - 10963161
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagttt 249  Q
    ||||| ||||| | ||| |||||||||||  ||||| ||||||||||||||||||| |  |||||||||    
T  10963229 ttttaatttgatagaatattcaagttagttttttaaatttcaaaagttttaaataggtcattttagttt 10963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 17132265 - 17132217
Alignment:
Q  187 tttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    ||||||| |||| |||||||| |||||||||||||||||| || |||||    
T  17132265 tttgacagaattctcaagttaatcctttaagtttcaaaagattcaaata 17132217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 24139038 - 24139074
Alignment:
Q  213 ttaagtttcaaaagttttaaatagattcttttagttt 249  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  24139038 ttaagttttaaaagttttaaatagattcgtttagttt 24139074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 7e-43; HSPs: 100)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 27995047 - 27995195
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||| || |||||||||||||||||||||| |||| ||||||||||  |||||||||||||| ||| ||||||||  ||||| ||||||| ||||    
T  27995047 ggccaaatatcacgtttggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgacagaatt 27995146  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  27995147 ctcaagttaatcctttaagtttcaaaagtatcaaataagtaattttagt 27995195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 161 - 295
Target Start/End: Complemental strand, 39959330 - 39959196
Alignment:
Q  161 ccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattct 260  Q
    |||||||||| |||||||||||||||||||||| |||||| || |||||| ||||| ||| |||||||| ||||||||||||||||||||||| ||||      
T  39959330 ccaaataccacgtttggtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttc 39959231  T
Q  261 caagttaatcctttaaatttcaaaagtttcaaata 295  Q
    |||||||||| ||||| ||||||||||||||||||    
T  39959230 caagttaatcatttaagtttcaaaagtttcaaata 39959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 28256482 - 28256615
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||| ||| |||| |||||||||||||||| ||||  ||||||| | |||||| |||||||||||||||| |||| |||||||||||||| |||||||    
T  28256482 caaatatcatatttgatccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtttgacagaattctc 28256581  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaata 295  Q
    |||||| |||||||||||||||||||||||||||    
T  28256582 aagttagtcctttaaatttcaaaagtttcaaata 28256615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 162 - 307
Target Start/End: Complemental strand, 33879651 - 33879506
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||| ||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||| || ||| | |||||| ||||||| ||||  |    
T  33879651 caaataccatttttggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttcc 33879552  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||||| |||||||||||||||||| ||| |||||||    
T  33879551 aagttaatcctttaagtttcaaaagtttcaaataggtccttttagt 33879506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 178 - 294
Target Start/End: Original strand, 21412931 - 21413047
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 277  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||||||||||||| || |||||     
T  21412931 tccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagttttaaatagatcattttagtttcacagaattctcaagttagtcttttaag 21413030  T
Q  278 tttcaaaagtttcaaat 294  Q
    |||||||||||| ||||    
T  21413031 tttcaaaagttttaaat 21413047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 307
Target Start/End: Complemental strand, 20366675 - 20366528
Alignment:
Q  160 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 259  Q
    |||||||||||  ||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||  || |||| |||||||||||||| |||||    
T  20366675 gccaaataccacatttggtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattc 20366576  T
Q  260 tcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
     ||||||| |||||||  |||||||||||||||||| ||| |||||||    
T  20366575 gcaagttagtcctttaggtttcaaaagtttcaaatatgtccttttagt 20366528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 5559093 - 5559243
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataat 257  Q
    |||||||||||| |||||||||||||| ||||||| ||||  |||||||||||||| ||||||||||||||| |||||||| |||||||||||| | |||    
T  5559093 ggccaaataccacgtttggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaat 5559192  T
Q  258 tctcaagttaatcc-tttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    || ||||||| ||| ||||| |||||||||||||||||| ||| |||||||    
T  5559193 tcccaagttagtccttttaagtttcaaaagtttcaaataggtccttttagt 5559243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 19925472 - 19925340
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||  |||||| |||||||||||||||||||  ||| ||||||||||||||| | |||||||||| ||||| |||||||||||||| ||||| ||    
T  19925472 aaataccacttttggttcttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattccca 19925373  T
Q  263 agttaatcctttaaatttcaaaagtttcaaata 295  Q
    ||||| |||||||| ||||||||||||||||||    
T  19925372 agttagtcctttaagtttcaaaagtttcaaata 19925340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 5805028 - 5805172
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||  || |||||||||||||||||| |||| |||||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||||||    
T  5805028 aaataccactttcggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctca 5805127  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    || || |||||||| |||||||||||| || || ||| |||||||    
T  5805128 agctattcctttaagtttcaaaagttttaactaggtccttttagt 5805172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 5805731 - 5805584
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||| |  |||||||||||||||||||||||||||| ||||||||| |||||||||  ||||||| || ||  | |||||||||||||  ||||    
T  5805731 ggccaaatactacctttggtccttttagtttgacaaaatttt-aagttagtcatttaagttttgaaagtttcaattatgtccttttagtttgactgaatt 5805633  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
     ||||||||||| ||||| |||||||||||||||||| |||||||||||    
T  5805632 ttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagt 5805584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 31893611 - 31893489
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||| ||| ||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||| || ||| | |||||||||||||| |||||||    
T  31893611 caaatatcatttttggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaattctc 31893512  T
Q  262 aagttaatcctttaaatttcaaa 284  Q
    |||||| |||||||| |||||||    
T  31893511 aagttagtcctttaagtttcaaa 31893489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 21412856 - 21413000
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| ||| ||| ||||||||||||||||| |||| | |||||| ||||||||||||  ||||||| || ||||| |||||||||||||| |||| |||    
T  21412856 aaatatcatttttagtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttca 21412955  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||| |||||||||||| |||||  ||||||||||    
T  21412956 agttagtcctttaagtttcaaaagttttaaatagatcattttagt 21413000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 23150625 - 23150773
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| |||  ||||||| || ||  |  ||||| ||||||| ||||    
T  23150625 ggccaaatactatgtttggtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaatt 23150724  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||  ||| || ||||| ||||||||||||||||||| ||||||||||    
T  23150725 ctcagattagtcttttaagtttcaaaagtttcaaataaatcattttagt 23150773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 36566267 - 36566412
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||||||| |||||||||||||||||||||| |||| | ||||||||| |||||||||  ||||||| || ||| |  ||||||||||||| |||||||    
T  36566267 caaataccacgtttggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctc 36566366  T
Q  262 -aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
     |||||| | |||||| |||||||| |||||||||||||||||||||    
T  36566367 aaagttagt-ctttaagtttcaaaattttcaaataagtcattttagt 36566412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 159 - 284
Target Start/End: Complemental strand, 5559755 - 5559631
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||| || ||| | |||||||||||||| ||||    
T  5559755 ggccaaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagttt-taaagtttcaattaggtccttttagtttgacagaatt 5559657  T
Q  259 ctcaagttaatcctttaaatttcaaa 284  Q
    | ||||||| |||||||| |||||||    
T  5559656 cccaagttagtcctttaagtttcaaa 5559631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 183 - 305
Target Start/End: Complemental strand, 29591171 - 29591047
Alignment:
Q  183 ttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagt--taatcctttaaattt 280  Q
    ||||||||| | |||| ||||||||||||||||||||||||||||||||| ||| |  ||||||||||||| ||| | |||||  ||||||||||| |||    
T  29591171 ttagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagtttgacaaaatccgcaagttataatcctttaagttt 29591072  T
Q  281 caaaagtttcaaataagtcatttta 305  Q
    ||||||||| |||||||||||||||    
T  29591071 caaaagttttaaataagtcatttta 29591047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 20366035 - 20366181
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||| ||| ||||||||||||||||| ||| |||| |||||||||||||||||||||| ||||||| || ||  | |||||||||||||| ||||    
T  20366035 ggccaaatatcatttttggtccttttagttt-acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaatt 20366133  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||| ||| ||||| ||| ||||||| ||||||||||| ||| |||||||    
T  20366134 ctc-agtcaatcccttatatttcaagagtttcaaataggtctttttagt 20366181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 34951218 - 34951361
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||  |||| || |||||||||||||| |||  |||  ||||| |||||||||| ||||||| || ||| | ||||| ||||||||||||||| |    
T  34951218 aaataccacttttgatctttttagtttgacaatattcccaacatagtc-tttaagtttcgaaagtttcaattaggtccttttcgtttgacataattctta 34951316  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  34951317 agttagtcctttaagtttcaaaagtttcaaataagtcattttagt 34951361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 292
Target Start/End: Original strand, 1346480 - 1346599
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    |||| |||||||||||||||| |||| | |||||||| ||||||||||| ||||||| || || || |||||||||||||||||||  ||||||| ||||    
T  1346480 tttgatccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagtcct 1346579  T
Q  273 ttaaatttcaaaagtttcaa 292  Q
    |||| |||||||||||||||    
T  1346580 ttaagtttcaaaagtttcaa 1346599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 35214806 - 35214941
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 271  Q
    |||| |||||||||||||||| |||||  |||||||| |||| ||||||||||||||| || ||| | |||||||||||||| ||||||||||||| ||     
T  35214806 tttgatccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtct 35214905  T
Q  272 tttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||| ||||||||| ||| |||||||    
T  35214906 tttaagtttcaaaaatttcaaataggtctttttagt 35214941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 21433144 - 21433278
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||||| || |||| || ||  | |||||||||||| | ||||| ||||||| || |    
T  21433144 tttgatccttttagtttgacaaaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattcccaagttagtcat 21433243  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| |||||||||||||||||||||  |||||||    
T  21433244 ttaagtttcaaaagtttcaaataagttcttttagt 21433278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 307
Target Start/End: Original strand, 33235042 - 33235168
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||||||||||| |||| |||||||| |||||||| ||| |||||||| || ||| | ||||| |||||||| ||||| |||||||  |||||||||||    
T  33235042 ttttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaattcccaagttagacctttaaattt 33235141  T
Q  281 caaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||| | |||||||||||    
T  33235142 caaaagtttcaaagaggtcattttagt 33235168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 40904691 - 40904813
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||||||| |||||||| || ||| | ||||||||||||||||||| |||| ||| || |    
T  40904691 tttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcat 40904790  T
Q  273 ttaaatttcaaaagtttcaaata 295  Q
    |||| ||| ||||||||||||||    
T  40904791 ttaagttttaaaagtttcaaata 40904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 1349269 - 1349139
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagtt---aatcctttaa 276  Q
    |||||||||||||| |||||  ||||||||| |||||||||||||||||||||||| ||  ||||||||||||| ||||  ||| ||   | ||||||||    
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaa 1349170  T
Q  277 atttcaaaagtttcaaataagtcattttagt 307  Q
     |||||||||||||||||| |||||||||||    
T  1349169 gtttcaaaagtttcaaataggtcattttagt 1349139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 36566341 - 36566458
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaa-gttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttt 274  Q
    |||| ||||||||||||| |||| |||| ||||||| |||||||||||||| ||| |||||  |  ||||||||||||| ||||||||||||| ||||||    
T  36566341 ggtcattttagtttgacagaattctcaaagttagtc-tttaagtttcaaaattttcaaataagtcattttagtttgacaaaattctcaagttagtccttt 36566439  T
Q  275 aaatttcaaaagtttcaaa 293  Q
    |||||||||||||||||||    
T  36566440 aaatttcaaaagtttcaaa 36566458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 33879577 - 33879480
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 273  Q
    |||||||||| ||||||| ||||| ||||||| ||||||||||||||||||||| |||||| | ||||||||| |||||||||| ||||||| |||||    
T  33879577 ggtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagtttcaaataggtccttttagttcgacataattcccaagttagtcctt 33879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 287
Target Start/End: Complemental strand, 34951597 - 34951472
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||||| || ||||||| ||||||||||||| |||| |||||||||||||||||||||| ||||||| || ||||| |||||||||||||| ||||       
T  34951597 caaatactatttttggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgacacaatttct 34951498  T
Q  262 aagttaatcctttaaatttcaaaagt 287  Q
    || | | |||||||| ||||||||||    
T  34951497 aaatcagtcctttaagtttcaaaagt 34951472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 159 - 295
Target Start/End: Original strand, 19925091 - 19925226
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||| || ||||||| ||||||||||||| ||||| ||||||| ||||| ||||||| ||||||| || ||||| |||||||||||||| ||||    
T  19925091 ggccaaatactatttttggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtttgacacaatt 19925190  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
     || | ||| |||||||| |||||||| | |||||||    
T  19925191 -tccaattagtcctttaagtttcaaaaatatcaaata 19925226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 307
Target Start/End: Complemental strand, 35215458 - 35215314
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| || ||  |  ||||| ||||||| ||||  ||    
T  35215458 aaatatcacgtttgatccttttagtttgacaaaattttcaagttagtcctttaaatttcgaaaatttcaattaagtcattttaatttgacagaatttcca 35215359  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    | ||| || ||||| ||| ||||||||||||||| ||||||||||    
T  35215358 aattagtcttttaagttttaaaagtttcaaataactcattttagt 35215314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 40904754 - 40904841
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa 263  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||| |||||||| |||||||| |||||| ||||||| |||||||||    
T  40904754 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattctcaa 40904841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 1286374 - 1286492
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 276  Q
    ||||||||||||||| | ||||||||| |||||  ||||| |||||||||||| || ||| | |||||||||||| | |||||| |||||| || |||||    
T  1286374 gtccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 1286473  T
Q  277 atttcaaaagtttcaaata 295  Q
     ||||||||||||||||||    
T  1286474 gtttcaaaagtttcaaata 1286492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 41020258 - 41020137
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||| |||| |||||||||||||||| ||||| |||||||||  |||||||||  |||||||||| ||||| |||||||||||||| ||||       
T  41020258 caaataccatttttgatccttttagtttgacataatttccaagttagtt-tttaagttttgaaagttttaattagatccttttagtttgacagaatttct 41020160  T
Q  262 aagttaatcctttaaatttcaaa 284  Q
    |||||||| |||||| |||||||    
T  41020159 aagttaattctttaagtttcaaa 41020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 27995654 - 27995569
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||| ||| ||||||| ||||||| ||||| | |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  27995654 aaatatcatttttggtctttttagtatgacatattttttaagttagtcctttaagtttcaaaagttttaaatagatccttttagtt 27995569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 31893236 - 31893361
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||| |||||| |||||||||||||| |||| ||||||||||  |||||||||| ||||||| || ||| |  ||||||||||||| ||||    
T  31893236 ggccaaataccatttttggttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaatt 31893335  T
Q  259 ctcaagttaatcctttaaatttcaaa 284  Q
    |  |||||| || ||||| |||||||    
T  31893336 cctaagttagtcttttaagtttcaaa 31893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 284
Target Start/End: Complemental strand, 22876992 - 22876867
Alignment:
Q  158 gggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataat 257  Q
    |||| ||||||||  |||| |||||||||||||||| ||||| ||||||| |  |||||||||| ||||||| || ||  |  ||||||||||||| |||    
T  22876992 gggctaaataccacttttgatccttttagtttgacataatttccaagttaatt-tttaagtttcgaaagtttcaattaagtcattttagtttgacagaat 22876894  T
Q  258 tctcaagttaatcctttaaatttcaaa 284  Q
    ||||||||||||||||||| |||||||    
T  22876893 tctcaagttaatcctttaagtttcaaa 22876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 28256558 - 28256628
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||| |||||||||||    
T  28256558 tccttttagtttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggttcttttagtt 28256628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 8040271 - 8040160
Alignment:
Q  172 gtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 271  Q
    |||||||||||||||||| ||  ||||| ||| |||||| |||||||||||||| ||| |||||||| ||||||| |||||| || || ||||||| |||    
T  8040271 gtttggtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttagcttgacagaa-tcccaagttagtcc 8040173  T
Q  272 tttaaatttcaaa 284  Q
    ||||| |||||||    
T  8040172 tttaagtttcaaa 8040160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 10619867 - 10619935
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||| |||||| | |||||||||    
T  10619867 cttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 10619935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 31176018 - 31175946
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| || | |||||||||    
T  31176018 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagtt 31175946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 33235616 - 33235564
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaa 225  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33235616 tttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaa 33235564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 1441557 - 1441446
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||| ||||  ||||||||||||||| ||||| ||||||| || ||| |  ||||||||||| | ||||| ||||||| || |    
T  1441557 tttggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaattcccaagttagtctt 1441458  T
Q  273 ttaaatttcaaa 284  Q
    |||| |||||||    
T  1441457 ttaagtttcaaa 1441446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 4187763 - 4187680
Alignment:
Q  224 aagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||| ||||| |||||| ||||||| |||| |||||||| |||||||||||| |||||||| ||||| |||||||||||    
T  4187763 aagttttaattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagt 4187680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 10619851 - 10619934
Alignment:
Q  224 aagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| || ||| |||||||||||||||| |||| |||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagt 10619934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 304
Target Start/End: Complemental strand, 21433391 - 21433328
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttt 304  Q
    ||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttt 21433328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 307
Target Start/End: Original strand, 42990495 - 42990634
Alignment:
Q  168 ccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagtta 267  Q
    |||||||| || ||||||||| || | |||||| || ||||||||||||||||  |||||||||| ||| |  |||||||| |||| |||| ||||||||    
T  42990495 ccatgtttagtgcttttagttggaaagaatttttaaattagtcctttaagttttgaaagttttaattaggtcattttagttcgacagaattttcaagtta 42990594  T
Q  268 atcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||  ||||| ||| |||||||| || || |||||||||||    
T  42990595 attttttaagttttaaaagttttaattatgtcattttagt 42990634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 20101887 - 20101956
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||| |||| | |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  20101887 tccttttagttcgacaga-ttttcaagttagtcctttaagttttaaaagttttaaatagattctcttagtt 20101956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 34951521 - 34951415
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 277  Q
    |||||||||||||||| |||||  || | ||||||||||||||||||||| | |||||    |||||||||||||| ||||||||||||| || |||||     
T  34951521 tccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagtataaaatatgaccttttagtttgacacaattctcaagttagtcatttaag 34951422  T
Q  278 tttcaaa 284  Q
    |||||||    
T  34951421 tttcaaa 34951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 251
Target Start/End: Original strand, 8039652 - 8039741
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttga 251  Q
    |||||||||  ||| ||||||||||||||||| |||| |||||||||| ||||||||||| ||||||| || ||| | ||||||||||||    
T  8039652 caaataccactttttgtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtttga 8039741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 21433391 - 21433278
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaat-cctttaaatt 279  Q
    ||||||||||||| ||||  ||||||| ||||||||||||||||||||| |||||  || |||| |||||||| ||||| ||||||| | | ||||| ||    
T  21433391 ttttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttagtacttttaagtt 21433292  T
Q  280 tcaaaagtttcaaa 293  Q
    |||||| |||||||    
T  21433291 tcaaaaatttcaaa 21433278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 285
Target Start/End: Complemental strand, 31893537 - 31893437
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||         ||  | |||||||||||||| ||||||||||||| |||||||    
T  31893537 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaa---------taagtccttttagtttgacaaaattctcaagttagtccttta 31893447  T
Q  276 aatttcaaaa 285  Q
    | ||||||||    
T  31893446 agtttcaaaa 31893437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 284
Target Start/End: Original strand, 39958677 - 39958798
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| ||| ||||||||||||||||||||| |||||| ||||||||| ||||||| || ||||||| || ||  |  ||||||||||||| ||||| ||    
T  39958677 aaatatcatttttggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtttgacagaattccca 39958776  T
Q  263 agttaatcctttaaatttcaaa 284  Q
       ||||||||||| |||||||    
T  39958777 ttctaatcctttaagtttcaaa 39958798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 1286433 - 1286505
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||| | |||| | ||||||||| |||||||||||||||||| |||||| |||||||||||    
T  1286433 ggtccttttagtttgagagaattctaaagttagtcttttaagtttcaaaagtttcaaataggttcttttagtt 1286505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 5805101 - 5805173
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||||| |||| ||||| || |||||||||||||||||||||||| ||| | |||||||||    
T  5805101 ggtccttttagtttgacagaattctcaagctattcctttaagtttcaaaagttttaactaggtccttttagtt 5805173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 23679587 - 23679520
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||||| ||||||||| ||||||||    
T  23679587 cttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtttaaaatagattattttagtt 23679520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 33235690 - 33235542
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||  ||||||| || ||||||||| ||| ||||   || ||| | ||||| ||||  |||||||||| | | | |||||||||||||| ||||    
T  33235690 ggccaaatattatgtttgatcattttagtttcacagaattcctaaattatttctttacgttttgaaagttttaatttggtccttttagtttgacaaaatt 33235591  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
     |||||||| |||||||| ||||||||  |||||||| |||||||||||    
T  33235590 atcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagt 33235542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 293
Target Start/End: Original strand, 4187515 - 4187626
Alignment:
Q  182 tttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttc 281  Q
    |||||||||||| ||||   || ||| ||||||||||||  ||||||| || ||| | ||||| |||||||||||||| ||||||| | |||||| ||||    
T  4187515 tttagtttgacagaattcataaattaatcctttaagtttagaaagtttcaattaggtactttttgtttgacataattcccaagttagttctttaagtttc 4187614  T
Q  282 aaaagtttcaaa 293  Q
    ||||||||||||    
T  4187615 aaaagtttcaaa 4187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 4187749 - 4187691
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    |||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  4187749 tccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaatag 4187691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 19925397 - 19925339
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||    
T  19925397 tccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaatag 19925339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 20366597 - 20366527
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||  | |||||||||    
T  20366597 tccttttagtttgacaaaattcgcaagttagtcctttaggtttcaaaagtttcaaatatgtccttttagtt 20366527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 21433208 - 21433282
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttga 251  Q
    ||||||||||||||| | ||||  |||||||||| |||||||||||||||||| |||||  ||||||||||||||    
T  21433208 gtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtttga 21433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 307
Target Start/End: Complemental strand, 31176052 - 31175947
Alignment:
Q  202 aagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcat 301  Q
    |||||| |||||||| |||  ||||||| || ||| | |||||||||||||| ||||  ||||||| |||||||| |||||||||||||||| | ||| |    
T  31176052 aagttaatcctttaatttttgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtcct 31175953  T
Q  302 tttagt 307  Q
    ||||||    
T  31175952 tttagt 31175947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 39959251 - 39959186
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattctttta 245  Q
    |||||||||||||| ||||| ||||||| || |||||||||||||||||| |||||| ||||||||    
T  39959251 cttttagtttgacagaatttccaagttaatcatttaagtttcaaaagtttcaaataggttctttta 39959186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 1286936 - 1286806
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    |||||| | |||||||||||||||||| | | |||||| |||| |||| ||||| |||||||||||||||||||| || | || ||||| | |||| |||    
T  1286936 aaatacaaagtttggtccttttagtttcatagaatttttaagtcagtcatttaa-tttcaaaagttttaaataga-tcctataatttgatagaattttca 1286839  T
Q  263 agttaatcctttaaatttcaaaagtttcaaata 295  Q
    | ||| |||||||| ||| |||||||| |||||    
T  1286838 aattagtcctttaagttttaaaagttttaaata 1286806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 20101813 - 20101943
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||| |||| || ||||||||||||  ||||  |||||||||  |||||||||| ||||||| || ||||| ||||||||| ||||  ||| |||    
T  20101813 aaataccatttttgatcattttagtttgactgaattcccaagttagt-ttttaagtttcgaaagtttcaattagatccttttagttcgaca-gattttca 20101910  T
Q  263 agttaatcctttaaatttcaaaagtttcaaata 295  Q
    ||||| |||||||| ||| |||||||| |||||    
T  20101911 agttagtcctttaagttttaaaagttttaaata 20101943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 295
Target Start/End: Complemental strand, 23679659 - 23679533
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||||| |||||||| ||||||||||| ||||||  ||| ||||||         ||| |||||| || ||| |||||||||||||||| ||||    
T  23679659 ggccaaataccacgtttggtctttttagtttgataaaattcacaaattagtc---------tcataagtttcaattaggttcttttagtttgacagaatt 23679569  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
    ||||||||| | |||||| |||||||||||| |||||    
T  23679568 ctcaagttagt-ctttaagtttcaaaagtttaaaata 23679533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 28256998 - 28256954
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagttt 220  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  28256998 ggtcattttagtttgacaaaattttcaagttagtcctttaagttt 28256954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 1441550 - 1441483
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||||| ||||||| |||||||  |||| |||||||||| || |||||||||||    
T  1441550 cttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagt 1441483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 5559173 - 5559244
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||| ||||||  |||||||||||||| ||||||||||||||| |||||| | |||||||||    
T  5559173 tccttttagtttgataaaattcccaagttagtccttttaagtttcaaaagtttcaaataggtccttttagtt 5559244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 8039670 - 8039737
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||||||||||||| | |||||| |||| |||||||||| || ||| |||||||    
T  8039670 cttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagt 8039737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 20183769 - 20183903
Alignment:
Q  173 tttggtcctttt-agtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 271  Q
    |||||||||||| ||||||||| ||||| ||| | ||| |||||| |||  ||||||| || ||||| |||| | ||| | | | ||| ||||||| |||    
T  20183769 tttggtcctttttagtttgacagaatttacaattcagttctttaaattttgaaagtttcaattagatcctttaa-tttaatagagttcccaagttagtcc 20183867  T
Q  272 tttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||| |||||||||||||||||||||    
T  20183868 tttaagtttcaaaaatttcaaataagtcattttagt 20183903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 1440992 - 1441062
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    ||||||||||||  |||| |||||||||||||||| ||||  |||||||||  ||||||||||||||||||    
T  1440992 ggccaaataccacatttgatccttttagtttgacagaattcccaagttagtattttaagtttcaaaagttt 1441062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 272
Target Start/End: Original strand, 5075337 - 5075446
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||| |||||||| | |||||||||||||| |  | ||||||||||||||||||||| ||||| ||| ||| || || |||  ||||||| |||||||    
T  5075337 caaatatcatgtttgattcttttagtttgacagatctctcaagttagtcctttaagttttaaaag-tttcaattgagtccttttatttgacagaattctc 5075435  T
Q  262 aagttaatcct 272  Q
    |||||| ||||    
T  5075436 aagttagtcct 5075446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 19925170 - 19925267
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 276  Q
    |||||||||||||||| ||||| ||| ||||||||||||||||||||| | | ||||||   |||||||||| ||| ||||  ||||||| ||||||||    
T  19925170 tccttttagtttgacacaatttccaa-ttagtcctttaagtttcaaaaatatcaaataggaccttttagtttaacagaatttccaagttagtcctttaa 19925267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 28104297 - 28104359
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    |||||||||||||||||| || ||||  |||| ||||| ||||||||||||||||||||||||    
T  28104297 tttggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaata 28104359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 31893255 - 31893324
Alignment:
Q  238 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||| ||||||||||||| |  ||||| |||| |||||||||| || |||||||||||    
T  31893255 ttcttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagt 31893324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 36566587 - 36566526
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||  |||||||| |||||||||||| ||||| |||||||||| |||||||||||||    
T  36566587 aaataccacttttggtccctttagtttgacagaatttccaagttagtcttttaagtttcaaa 36566526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 1349270 - 1349202
Alignment:
Q  239 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||||||||||   |||||| || ||||| |||||||||||| |||||| ||||||||||    
T  1349270 tcttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagt 1349202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 6220432 - 6220365
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||| | | |||| ||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  6220432 cttttagtttcatagaattctcaagttagtc-tttaagtttcaaaagttttcaataggttcttttagtt 6220365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 29591171 - 29591107
Alignment:
Q  243 ttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||| |||||| |||||||| |||||||| |||||||||||| || || |||||||||||    
T  29591171 ttagtttgatataattatcaagttagtcctttaagtttcaaaagttttaattaggtcattttagt 29591107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 22876970 - 22876904
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||||  |||||||||  ||||| |||| |||||||||| ||||||||||||||    
T  22876970 cttttagtttgacataatttccaagttaatt-tttaagtttcgaaagtttcaattaagtcattttagt 22876904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 39958694 - 39958761
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||||||||| | |||||| || ||||| | || |||||||||| ||||||||||||||    
T  39958694 cttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagt 39958761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 40904698 - 40904765
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||||||||||||||||| || ||||| ||| ||||||||||| || ||| |||||||    
T  40904698 cttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagt 40904765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 42889033 - 42888995
Alignment:
Q  269 tcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  42889033 tcctttaagtttcaaaagtttcaaataagtcattttagt 42888995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 305
Target Start/End: Original strand, 5075351 - 5075420
Alignment:
Q  236 gattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    |||||||||||||||||| |  |||||||||| |||||||| ||| ||||||||||| | |||| |||||    
T  5075351 gattcttttagtttgacagatctctcaagttagtcctttaagttttaaaagtttcaattgagtcctttta 5075420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 28257071 - 28256958
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||  ||| ||||||||||||||| | |||| | ||||||||  |||||||||  ||| ||| || ||| |  ||||||||||||| |||| |||    
T  28257071 aaataccactttttgtccttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtttgacaaaattttca 28256972  T
Q  263 agttaatcctttaa 276  Q
    ||||| ||||||||    
T  28256971 agttagtcctttaa 28256958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 1346487 - 1346554
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||||| |||||| | |||||| |||| |||||||||| ||| || |||||||    
T  1346487 cttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagt 1346554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 28104304 - 28104371
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||| |||||||| |||| || || ||||| |||||||||||| ||||| ||| |||||||    
T  28104304 cttttagtttggcataattcacaaggtagtcatttaagtttcaaaagttttaaatatgtctttttagt 28104371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 292
Target Start/End: Complemental strand, 34951578 - 34951527
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    ||||||||||||| |||| |||||||| |||||||| |||| ||||||||||    
T  34951578 ttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaa 34951527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 307
Target Start/End: Complemental strand, 4187656 - 4187626
Alignment:
Q  277 atttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||||||||||||||||    
T  4187656 atttcaaaagtttcaaataagtcattttagt 4187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 29591118 - 29591057
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagt--tagtcctttaagtttcaaaagttttaaata 235  Q
    |||| |||||||||||||||||   |||||  || |||||||||||||||||||||||||||    
T  29591118 ggtcattttagtttgacaaaatccgcaagttataatcctttaagtttcaaaagttttaaata 29591057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 293
Target Start/End: Original strand, 1441013 - 1441066
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaa 293  Q
    |||||||||||||| ||||| ||||||| |  ||||| ||||||||||||||||    
T  1441013 cttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaaa 1441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 4187573 - 4187622
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    ||||| |||||||| ||||  ||||||||| |||||||||||||||||||    
T  4187573 ctttttgtttgacataattcccaagttagttctttaagtttcaaaagttt 4187622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 289
Target Start/End: Complemental strand, 6220492 - 6220384
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 279  Q
    |||||||||||| | ||||||||||||| | ||||||  ||  ||||||| ||  || | |||||||||| | | ||||||||||||| | |||||| ||    
T  6220492 cttttagtttgatataattttcaagttaattctttaaaattataaagtttcaataaggtacttttagtttcatagaattctcaagttagt-ctttaagtt 6220394  T
Q  280 tcaaaagttt 289  Q
    ||||||||||    
T  6220393 tcaaaagttt 6220384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 6220493 - 6220440
Alignment:
Q  239 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    ||||||||||||| |||||| |||||||||| ||||||| ||  ||||||||||    
T  6220493 tcttttagtttgatataattttcaagttaattctttaaaattataaagtttcaa 6220440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 10620284 - 10620239
Alignment:
Q  179 ccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  10620284 ccttttagtttaacagaatttccaagtaagtcctttaagtttcaaa 10620239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 19925230 - 19925271
Alignment:
Q  179 ccttttagtttgacaaaattttcaagttagtcctttaagttt 220  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||    
T  19925230 ccttttagtttaacagaatttccaagttagtcctttaagttt 19925271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 21413167 - 21413099
Alignment:
Q  179 ccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||| ||||||| |||||  ||||||||  |||||||||||||||||| |||||| | |||||||||    
T  21413167 ccttttaatttgacagaatttctaagttagtt-tttaagtttcaaaagtttcaaataggtccttttagtt 21413099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 307
Target Start/End: Complemental strand, 21413244 - 21413100
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||||| || |||||||||||||||| |||| ||||  ||| |||||  ||| |||||| ||| ||| || |||   |||||| ||||||| ||||       
T  21413244 caaatactatttttggtccttttagttcgacagaattcccaaattagttattttagtttcgaaaatttcaattaggcccttttaatttgacagaatttct 21413145  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| |  ||||| |||||||||||||||||| ||| |||||||    
T  21413144 aagttagtt-tttaagtttcaaaagtttcaaataggtccttttagt 21413100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 33235097 - 33235150
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    ||||||||| |||||||| ||||  |||||||| ||||||| ||||||||||||    
T  33235097 ggtccttttggtttgacagaattcccaagttagacctttaaatttcaaaagttt 33235150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 42991122 - 42991058
Alignment:
Q  243 ttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||| | || | ||||||||||||||||||||||  |||||| ||  |||||||||||||    
T  42991122 ttagtttgaaaaaaatttcaagttaatcctttaaatttcggaagttttaatcaagtcattttagt 42991058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 27893685 - 27893551
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| || ||| |||||||||||||||| ||||| ||||||| ||||    
T  27893685 tttggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattcccaagttagtcct 27893586  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| ||||||||||||||||||  ||||||||||    
T  27893585 ttaagtttcaaaagtttcaaatagatcattttagt 27893551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 30907136 - 30907253
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||| || ||||    
T  30907136 ggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagattgacataattcccaagttagtcattta 30907235  T
Q  276 aatttcaaaagtttcaaa 293  Q
    | ||||||||||||||||    
T  30907236 agtttcaaaagtttcaaa 30907253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 30907061 - 30907195
Alignment:
Q  160 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 259  Q
    |||||||| ||| ||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||||||| || ||| | ||||||||||||||||||||    
T  30907061 gccaaatatcatttttggtc-ttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattc 30907159  T
Q  260 tcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
    |||||||| |||||||| ||||||||||||||||||    
T  30907160 tcaagttagtcctttaagtttcaaaagtttcaaata 30907195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 31263924 - 31264046
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||||| || ||| | |||||||||||||| ||||||||||||| ||||    
T  31263924 tttggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcct 31264023  T
Q  273 ttaaatttcaaaagtttcaaata 295  Q
    |||| ||||||||||||||||||    
T  31264024 ttaagtttcaaaagtttcaaata 31264046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 159 - 303
Target Start/End: Complemental strand, 30907453 - 30907308
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattctttta-gtttgacataat 257  Q
    ||||||||||||  |||  ||||||||||||||||||||||  ||||||||| |||||||||| ||||||| || ||| | |||||| |||||| | |||    
T  30907453 ggccaaataccacttttaatccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaat 30907354  T
Q  258 tctcaagttaatcctttaaatttcaaaagtttcaaataagtcattt 303  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||    
T  30907353 tctcaagttagtcctttaagtttcaaaagtttcaaataagtcattt 30907308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 173 - 292
Target Start/End: Complemental strand, 16781174 - 16781054
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 271  Q
    ||||||| ||||||||||||| |||| ||||||||||||||| ||||||  |||||||||| ||| | |||||||||||||| ||||| ||||||| |||    
T  16781174 tttggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttgacaaaattcacaagttagtcc 16781075  T
Q  272 tttaaatttcaaaagtttcaa 292  Q
    |||||||||||||||||||||    
T  16781074 tttaaatttcaaaagtttcaa 16781054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 34336023 - 34336168
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||  |||| |||||||||||||| ||||||||||| ||||||||||||||||  ||||||| || ||  |  ||||||||||||| ||||| |    
T  34336023 caaataccacttttgatccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtttgacagaattccc 34336122  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| |||||||| |||||||||||| ||||| ||| |||||||    
T  34336123 aagttagtcctttaagtttcaaaagttttaaataggtctttttagt 34336168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 176 - 284
Target Start/End: Original strand, 31263987 - 31264095
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||| |||||||  ||||||| ||||| ||||||| | |||||    
T  31263987 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagtttcaaataggttctttttctttgacagaattcccaagttagtacttta 31264086  T
Q  276 aatttcaaa 284  Q
    | |||||||    
T  31264087 agtttcaaa 31264095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 36196626 - 36196494
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||| || ||| |  ||||||||||||| ||||  ||||||| || |    
T  36196626 tttggtccttttagtttgacaa--ttttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaatttccaagttagtcat 36196529  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    || | |||||||||||||||||| |||||||||||    
T  36196528 ttgagtttcaaaagtttcaaataggtcattttagt 36196494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 34336398 - 34336272
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||| |||| |||| |||||||||||| |||| ||||||| |  ||  | |||||| ||||||| ||||||||| ||| | ||    
T  34336398 tttggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttgacaaaattctcaaattagttct 34336299  T
Q  273 ttaaatttcaaaagtttcaaataagtc 299  Q
    |||||||||||||||||||||||||||    
T  34336298 ttaaatttcaaaagtttcaaataagtc 34336272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 162 - 307
Target Start/End: Complemental strand, 11871886 - 11871741
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||||| |||||||||||||||||||||||| ||||| ||||  ||||| ||||||||  ||| ||| || ||  | || ||||||||||| |||||||    
T  11871886 caaatactatgtttggtccttttagtttgacagaatttccaagccagtccgttaagttttgaaactttcaattatgtcctcttagtttgacagaattctc 11871787  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
     ||||| |||||||| |||||||||||| ||||| |||||||||||    
T  11871786 gagttagtcctttaagtttcaaaagttttaaatatgtcattttagt 11871741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 284
Target Start/End: Original strand, 27893023 - 27893145
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||||||| |||||||||||||||||||||| |||| |||||||| |||||||| |||| ||||||| || || ||  |||||||||||||  |||| |    
T  27893023 caaataccacgtttggtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattccc 27893122  T
Q  262 aagttaatcctttaaatttcaaa 284  Q
    |||||| |||||||| |||||||    
T  27893123 aagttagtcctttaagtttcaaa 27893145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 276
Target Start/End: Complemental strand, 37543218 - 37543101
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||  ||||||| || ||  | |||||||||||||||||||    
T  37543218 ggccaaataccatttttggttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttgacataatt 37543119  T
Q  259 ctcaagttaatcctttaa 276  Q
      |||| || ||||||||    
T  37543118 tccaaggtagtcctttaa 37543101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 8260392 - 8260506
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||||||| ||| |||| |||| ||||||||||||||||| ||||||| || |||||  ||||||||||||| | ||||||| ||| || ||||| |||    
T  8260392 ttttagttttacagaattctcaaattagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactcttttaatttt 8260491  T
Q  281 caaaagtttcaaata 295  Q
    |||||||||||||||    
T  8260492 caaaagtttcaaata 8260506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 42117282 - 42117196
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||| |||||||||||||||||| || || ||  ||||||||||||||||||||||||||||||||||| | |||||||||    
T  42117282 caaataccatttttggtccttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 42117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 34336334 - 34336226
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 276  Q
    ||||||||| |||||||||||| |||| ||||| |||||| |||||||||||| |||||  | ||| |||||||||| |||| ||||||||||| |||||    
T  34336334 gtccttttaatttgacaaaattctcaaattagttctttaaatttcaaaagtttcaaataagtccttgtagtttgacagaattttcaagttaatcttttaa 34336235  T
Q  277 atttcaaaa 285  Q
     ||||||||    
T  34336234 gtttcaaaa 34336226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 286
Target Start/End: Original strand, 34429681 - 34429793
Alignment:
Q  174 ttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 273  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||| ||| ||| || ||| | |||||| ||||| | ||||  |||||||||||||    
T  34429681 ttggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatttccaagttaatcctt 34429780  T
Q  274 taaatttcaaaag 286  Q
    ||| |||||||||    
T  34429781 taagtttcaaaag 34429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 284
Target Start/End: Complemental strand, 39301951 - 39301837
Alignment:
Q  170 atgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaat 269  Q
    ||||| |||||||||||||||| | |||||| ||||||||||||||| ||| ||||||||||| || ||  ||||||||||||| |||| | |||||| |    
T  39301951 atgttcggtccttttagtttgatagaatttttaagttagtcctttaaattttaaaagttttaattaaatctttttagtttgacagaatttttaagttatt 39301852  T
Q  270 cctttaaatttcaaa 284  Q
     |||||| |||||||    
T  39301851 tctttaagtttcaaa 39301837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 31264285 - 31264149
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagtta--gtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatc 270  Q
    |||| |||||||||||||||| ||||| |||||||  || ||||||||||| ||||||| || ||  | |||||||||||||| ||||  ||||||| |     
T  31264285 tttgatccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtttgacagaatttccaagttagtt 31264186  T
Q  271 ctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
     ||||| |||||||||||||||||| ||| |||||||    
T  31264185 atttaagtttcaaaagtttcaaataggtccttttagt 31264149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 284
Target Start/End: Original strand, 32341459 - 32341564
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaat 278  Q
    |||||||||||| | ||||||||| |||||||||| |||||| |||| ||| |||||| |||||||| ||||||| ||||||||| ||| |||| |||||    
T  32341459 cttttagtttgaaagaattttcaaattagtccttttaagttttaaaaatttcaaataggttcttttattttgacagaattctcaatttagtcctataaat 32341558  T
Q  279 ttcaaa 284  Q
    ||||||    
T  32341559 ttcaaa 32341564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 41265369 - 41265258
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    |||| |||||||||||||| | |||| ||||||||||| |||||||||| ||||||| || ||  | || ||| ||||||| ||||||||||||| ||||    
T  41265369 tttgatccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtcct 41265270  T
Q  273 ttaaatttcaaa 284  Q
    |||| |||||||    
T  41265269 ttaagtttcaaa 41265258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 27893041 - 27893093
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  27893041 cttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaa 27893093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 27893618 - 27893550
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  27893618 cttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaaatagatcattttagtt 27893550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 20536046 - 20535967
Alignment:
Q  205 ttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaa 284  Q
    ||||||||||||||| | |||||||||| || ||  ||||||||||||||||||||||||||| || ||||| |||||||    
T  20536046 ttagtcctttaagttacgaaagttttaattatatcattttagtttgacataattctcaagttagtcttttaagtttcaaa 20535967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 31264219 - 31264148
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||||||| ||||| |||||||||  |||||||||||||||||| |||||| | |||||||||    
T  31264219 gtccttttagtttgacagaatttccaagttagttatttaagtttcaaaagtttcaaataggtccttttagtt 31264148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 37542948 - 37543057
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||| ||||||||| || || |||||||||| |||||||||| |||||||||| ||  |  ||||||||||||||||||  ||||||| ||||    
T  37542948 tttggtccttt-agtttgacagaactt-caagttagtcttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcct 37543045  T
Q  273 ttaaatttcaaa 284  Q
    |||| |||||||    
T  37543046 ttaagtttcaaa 37543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 21813191 - 21813257
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaa 225  Q
    ||||||||||||  ||| ||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  21813191 ggccaaataccacttttagtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaa 21813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 15506052 - 15506117
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    |||||||||||||||||||||||| |||||||||||| ||| |||||||| ||| | |||||||||    
T  15506052 cttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcatttta 15506117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 19080617 - 19080762
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||| ||||||| |||||||| |||| ||||    | ||| ||||||||||||  ||||||| || ||| |  ||||||||||||| |||| ||    
T  19080617 caaataccatttttggtcattttagttcgacagaattccttaattaatcctttaagttttgaaagtttcaattaggtcattttagtttgacagaattttc 19080716  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||  | ||||| |||||||||||||| ||| ||| |||||||    
T  19080717 aagttagacatttaagtttcaaaagtttcatataggtccttttagt 19080762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 39376159 - 39376283
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||| ||| ||| ||||||||| ||| |||| ||||||| |||||| ||||||  ||||||| || ||||| |||||||||| ||  ||||    
T  39376159 ggccaaataccattttttgtcattttagtttaacataattctcaagttggtccttcaagttttgaaagtttcaactagatccttttagttttacggaatt 39376258  T
Q  259 ctcaagttaatcctttaaatttcaaa 284  Q
    |  |||||| | ||||||||||||||    
T  39376259 cctaagttagt-ctttaaatttcaaa 39376283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 293
Target Start/End: Complemental strand, 39376456 - 39376351
Alignment:
Q  188 ttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagt 287  Q
    |||||| ||||| |||||||||||||||||||||||| |||| |||||| |  ||||| ||||||| | |||  |||||| |||||||  ||||||||||    
T  39376456 ttgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtctttttaatttgacaaatttcctaagttagtcctttatgtttcaaaagt 39376357  T
Q  288 ttcaaa 293  Q
     |||||    
T  39376356 ctcaaa 39376351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 5116907 - 5116955
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5116907 ggtccttttagtttgacaaaatttttaaattagtcctttaagtttcaaa 5116955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 19080691 - 19080763
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||| ||||||||||||| |||||||||||||| | |||||||||||||||||| | |||| | |||||||||    
T  19080691 ggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtccttttagtt 19080763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 307
Target Start/End: Original strand, 20535502 - 20535576
Alignment:
Q  234 tagattcttttagtttgacataattctcaagttaatcctttaaa-tttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||||| |||||||| |||||||| || |||||| ||||||| |||||||||| |||||||||||    
T  20535502 tagatccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaataggtcattttagt 20535576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 13315865 - 13315808
Alignment:
Q  160 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaag 217  Q
    |||||| ||||| |||| |||||||||||||||| ||||| |||||||||||||||||    
T  13315865 gccaaagaccatttttgatccttttagtttgacataatttccaagttagtcctttaag 13315808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 15506048 - 15506105
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaa 233  Q
    |||||||||||||||||| |||| |||| ||| |||||||||||| ||||||||||||    
T  15506048 ggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaa 15506105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 16780928 - 16780989
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||  |||| |||||||| || |||| ||||||||||||||||||||||||||||||    
T  16780928 aaataccacttttgatccttttaattcgacagaattttcaagttagtcctttaagtttcaaa 16780989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 34336391 - 34336326
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    |||||||||||||| ||||||||| ||| ||||||||||||| |||||||||  |||||| |||||    
T  34336391 cttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtcctttta 34336326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 305
Target Start/End: Original strand, 34429687 - 34429752
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||| |||||| || ||| |||||    
T  34429687 cttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtcctttta 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 30907079 - 30907147
Alignment:
Q  239 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||||| ||||||||||||| || ||||| |||| |||||||||| || ||| |||||||    
T  30907079 tcttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagt 30907147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 20535487 - 20535565
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatag 236  Q
    |||||||||||| ||| | |||||||||||| ||| |||| ||||||||||| ||| |||||||||| |||| ||||||    
T  20535487 ggccaaataccacgttagatccttttagtttaacataattatcaagttagtcatttaaagtttcaaatgtttcaaatag 20535565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 31263932 - 31263998
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||| ||||  |||||||||||||||| |||| |||||||||| || ||| |||||||    
T  31263932 ttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagt 31263998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 295
Target Start/End: Original strand, 32341378 - 32341515
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||| ||  |||||| ||||||||||||||  ||| | |||||| |||||||| |||| ||| ||| || ||  |||||||||||||| | ||||    
T  32341378 ggccaaatatcacttttggttcttttagtttgacaggattcttaagttaatcctttaaatttcgaaaatttgaattaagttcttttagtttgaaagaatt 32341477  T
Q  259 ctcaagttaatcc-tttaaatttcaaaagtttcaaata 295  Q
     |||| ||| ||| ||||| ||| |||| |||||||||    
T  32341478 ttcaaattagtccttttaagttttaaaaatttcaaata 32341515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 32341397 - 32341466
Alignment:
Q  238 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||||||  ||||| |||||||||||||||||||| ||| ||| || |||||  |||||||    
T  32341397 ttcttttagtttgacaggattcttaagttaatcctttaaatttcgaaaatttgaattaagttcttttagt 32341466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 37543199 - 37543130
Alignment:
Q  238 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||| |||| |||||||| || ||||| |||  |||||||||| |||||| |||||||    
T  37543199 ttcttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagt 37543130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 242
Target Start/End: Original strand, 39301381 - 39301444
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattctt 242  Q
    |||||||||||| ||| |||| ||||||||||||||||| ||||| || |||||||||| |||||    
T  39301381 tccttttagtttcacataattatcaagttagtcctttaa-tttcataaattttaaataggttctt 39301444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 20536010 - 20535967
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||||||| |||| ||||||||||| |||||||||||||    
T  20536010 ttttagtttgacataattctcaagttagtcttttaagtttcaaa 20535967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 41265108 - 41265155
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagttt 220  Q
    ||||||| ||||||||||||| |||||||||||||||| ||| |||||    
T  41265108 tttggtcattttagtttgacataattttcaagttagtctttttagttt 41265155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 5116963 - 5117008
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaag 226  Q
    ||||||||||||||||||  ||||||| |||||||| |||||||||    
T  5116963 ttttagtttgacaaaattcacaagttactcctttaactttcaaaag 5117008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 286
Target Start/End: Original strand, 5116963 - 5117008
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaag 286  Q
    ||||||||||||| ||||| ||||||| |||||||| |||||||||    
T  5116963 ttttagtttgacaaaattcacaagttactcctttaactttcaaaag 5117008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 19081124 - 19081055
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttg 250  Q
    ||||||||||||| |||| |||| |||||| |||||||||| ||||||| || ||| |  ||||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagtttg 19081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 21813212 - 21813257
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaa 285  Q
    |||||||||||| | ||||||||||||| |||||||| ||||||||    
T  21813212 cttttagtttgatagaattctcaagttagtcctttaagtttcaaaa 21813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 3430870 - 3430830
Alignment:
Q  267 aatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||| ||||||||||| |||| |||||||||||||    
T  3430870 aatcctttaagtttcaaaagttccaaacaagtcattttagt 3430830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 15505943 - 15505999
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtt 219  Q
    |||||| || |||||| |||||||||||||| |||||| || ||| |||||||||||    
T  15505943 aaatactatttttggttcttttagtttgacagaatttttaaattactcctttaagtt 15505999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 37543140 - 37543100
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaag 217  Q
    ||||||||||||||||| ||||| |||| ||||||||||||    
T  37543140 gtccttttagtttgacataatttccaaggtagtcctttaag 37543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 45124315 - 45124263
Alignment:
Q  197 ttttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagttt 249  Q
    |||||||  |||||||||||||||||||||| | ||| | |||||||||||||    
T  45124315 ttttcaaagtagtcctttaagtttcaaaagtctcaaacaaattcttttagttt 45124263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 27351041 - 27351185
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    |||||||| |||||||| ||||| ||||||| ||||  ||||||||||||||||||||| ||||||| || ||  | |||||||||||||||||||||||    
T  27351041 aaataccacgtttggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctca 27351140  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||    
T  27351141 agttagtcctttaagtttcaaaagtatcaaataagtcattttagt 27351185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 159 - 295
Target Start/End: Original strand, 34254485 - 34254621
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||| ||||||| |||||||||||||||| |||| ||||||| |||||||||| |||||||||||||||||||| |||||||||||||| ||||    
T  34254485 ggccaaatacaatgtttgttccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaatt 34254584  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
    |  |||| | |||||||| ||||||||||||||||||    
T  34254585 cctaagtcagtcctttaagtttcaaaagtttcaaata 34254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 44964211 - 44964064
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||| |||| ||||||||||| ||||||||| ||||||||||| |||||||||| ||||||| || |||||  ||||||||||||| ||||    
T  44964211 ggccaaataccatttttgatccttttagttagacaaaattctcaagttagtc-tttaagtttcgaaagtttcaattagatcattttagtttgacagaatt 44964113  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||| |||||||| ||| |||||||||||||| ||| |||||||    
T  44964112 ctcaagttattcctttaagttttaaaagtttcaaataggtccttttagt 44964064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 181 - 293
Target Start/End: Complemental strand, 44964130 - 44964018
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||||||||||| |||| |||||||| |||||||||||| |||||||| |||||| | |||||||||||||| ||||||||||||| ||||||||||||    
T  44964130 ttttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagtcctttaaattt 44964031  T
Q  281 caaaagtttcaaa 293  Q
     ||||||||||||    
T  44964030 taaaagtttcaaa 44964018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 10686838 - 10686704
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |  ||| | |||||| ||  ||| ||||||||||||| || |    
T  10686838 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttacttcaacagaattctcaagttagtcat 10686739  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| ||| |||||||||||||| |||||||||||    
T  10686738 ttaagttttaaaagtttcaaataggtcattttagt 10686704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 162 - 307
Target Start/End: Complemental strand, 17898983 - 17898838
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||  |||||||||||||||||||||  ||| |||| ||||| |||||||||| |||| ||| || ||| | |||||||||||| | ||||| |    
T  17898983 caaataccacttttggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtttgatagaattcac 17898884  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    || ||| |||||||| ||||||||||||||||||||||||||||||    
T  17898883 aaattagtcctttaagtttcaaaagtttcaaataagtcattttagt 17898838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 160 - 307
Target Start/End: Complemental strand, 48352879 - 48352732
Alignment:
Q  160 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 259  Q
    |||||||||||  ||||||||||||||||||||| ||||  | |||||||| |||||||||| |||| || || ||| |   ||||||||||||||||||    
T  48352879 gccaaataccacttttggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattc 48352780  T
Q  260 tcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
     ||||||| |||||||| |||||||||||| ||||| |||||||||||    
T  48352779 ccaagttagtcctttaagtttcaaaagttttaaataggtcattttagt 48352732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 276
Target Start/End: Original strand, 11897831 - 11897945
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||  ||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||||||| || ||| | |||||||||||||| ||||| |    
T  11897831 caaataccacttttggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaattccc 11897930  T
Q  262 aagttaatcctttaa 276  Q
    |||||||||||||||    
T  11897931 aagttaatcctttaa 11897945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 176 - 291
Target Start/End: Complemental strand, 17898909 - 17898794
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    |||||||||||||||| | ||||  ||| ||||||||||||||||||||||||| |||||  |  ||||||||||||| |||| |||| ||| |||||||    
T  17898909 ggtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtccttta 17898810  T
Q  276 aatttcaaaagtttca 291  Q
    ||||||||||||||||    
T  17898809 aatttcaaaagtttca 17898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 29419173 - 29419050
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||| ||||| |||||||||| || ||||||| ||||||| || ||| | |||||||||||||| |||||  || ||| || |    
T  29419173 tttggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaattccaaaattagtctt 29419074  T
Q  273 ttaaatttcaaaagtttcaaataa 296  Q
    |||| |||||||||||||||||||    
T  29419073 ttaagtttcaaaagtttcaaataa 29419050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 274
Target Start/End: Complemental strand, 39302826 - 39302711
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| ||| |||||||| || || ||  ||||||||| ||| ||||    
T  39302826 ggccaaataccacgtttggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaactatatcgttttagtttaacaaaatt 39302727  T
Q  259 ctcaagttaatccttt 274  Q
     |||||||| ||||||    
T  39302726 ttcaagttactccttt 39302711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 181 - 307
Target Start/End: Complemental strand, 1766044 - 1765918
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||| ||||||| |||| ||||||||||| ||||| |||||||||||| || ||  |  ||||||||||||| || ||||| |||| ||||||||  ||    
T  1766044 ttttaatttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagctt 1765945  T
Q  281 caaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||||||||||||    
T  1765944 caaaagtttcaaataagtcattttagt 1765918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 10685848 - 10685959
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| || |||| || ||  |  ||||||||||||| ||||  ||||||| ||||    
T  10685848 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaagttagtcct 10685947  T
Q  273 ttaaatttcaaa 284  Q
    |||| |||||||    
T  10685948 ttaagtttcaaa 10685959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 49651096 - 49651014
Alignment:
Q  202 aagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaa 284  Q
    |||||||||||| ||||||| ||||||||||||||||  ||||||||||||| ||||||||||||| |||||||| |||||||    
T  49651096 aagttagtccttcaagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtcctttaagtttcaaa 49651014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 35701450 - 35701553
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||||||| ||| |||||| |||||| |  ||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| || |||||||||    
T  35701450 ttttagtttaacagaatttttaagttaatt-tttaaatttcaaaagttttaaataaattcttttaatttgacataattctcaagttagtcttttaaattt 35701548  T
Q  281 caaaa 285  Q
     ||||    
T  35701549 taaaa 35701553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 8903335 - 8903269
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||||    
T  8903335 ttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagt 8903269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 49650564 - 49650674
Alignment:
Q  164 aataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa 263  Q
    |||||||| |||  |||||||||||||||| |||| ||||||||||||||||| |||  ||| ||| || ||| | |||||||||||||| |||||||||    
T  49650564 aataccattttttatccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaa 49650663  T
Q  264 gttaatccttt 274  Q
    |||| ||||||    
T  49650664 gttagtccttt 49650674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 8902829 - 8902896
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||  | |||||||||    
T  8902829 ttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagtt 8902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 1765763 - 1765828
Alignment:
Q  183 ttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||| |||||  || |||||||||||||||||||||||||||||||||| |||||||||    
T  1765763 ttagtttgacataatttctaaattagtcctttaagtttcaaaagttttaaatagatccttttagtt 1765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 8902795 - 8902895
Alignment:
Q  207 agtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttag 306  Q
    ||||||| ||||||| ||||||| || ||  |  ||||||||||||| ||||| ||||||| |||||||| |||||||||||| ||||||||| ||||||    
T  8902795 agtccttgaagtttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttag 8902894  T
Q  307 t 307  Q
    |    
T  8902895 t 8902895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 181 - 284
Target Start/End: Complemental strand, 1765984 - 1765881
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||||||||||| || | ||| |||||||||||||| ||||||||||| |||||  |  ||||||||||||| ||||  ||||||| |||||||| |||    
T  1765984 ttttagtttgacagaaatctcatgttagtcctttaagcttcaaaagtttcaaataagtcattttagtttgacagaatttccaagttactcctttaagttt 1765885  T
Q  281 caaa 284  Q
    ||||    
T  1765884 caaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 2965480 - 2965553
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    |||||||||  ||| ||| ||||||||||||  |||||||||||||  ||||||||||||||||||||||||||    
T  2965480 caaataccaatttttgtctttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaata 2965553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 4772161 - 4772222
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    |||||||| ||| |||||||||||||||||||||||  |||| |||||||||||||||||||    
T  4772161 aaataccacgttaggtccttttagtttgacaaaattcacaaggtagtcctttaagtttcaaa 4772222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 8903357 - 8903268
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||||||||| |  ||||||| ||||||||||||| |||| |||||||| ||||||||||||| ||||||| ||||| ||  ||||||||    
T  8903357 ggccaaatactacttttggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagtt 8903268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 4772698 - 4772650
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  4772698 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 4772650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 39302805 - 39302753
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||||||||    
T  39302805 cttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaa 39302753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 27351659 - 27351548
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||| ||||||| |||| |||||||  | ||||||||||| |||||||||| ||  |  ||||| ||||| | ||||||||| ||| ||||    
T  27351659 tttggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgttttattttgatagaattctcaaattagtcct 27351560  T
Q  273 ttaaatttcaaa 284  Q
    |||| |||||||    
T  27351559 ttaagtttcaaa 27351548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 49650580 - 49650647
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||||||||||||| ||||||||||||  ||| |||||| || ||| |||||||    
T  49650580 cttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagt 49650647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 34254564 - 34254633
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagt 247  Q
    |||||||||||||||| ||||   |||| ||||||||||||||||||||||| ||||| || ||||||||    
T  34254564 tccttttagtttgacagaattcctaagtcagtcctttaagtttcaaaagtttcaaatatatgcttttagt 34254633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 296
Target Start/End: Original strand, 35701400 - 35701504
Alignment:
Q  191 acaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttc 290  Q
    |||||||||| || ||| || |||||||||  |||||||||| |||||  ||||||||| ||| |||| | ||||||||  ||||||||||||||||||     
T  35701400 acaaaatttttaatttaatcttttaagttttgaaagttttaattagatctttttagtttaacagaatttttaagttaatt-tttaaatttcaaaagtttt 35701498  T
Q  291 aaataa 296  Q
    ||||||    
T  35701499 aaataa 35701504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 44964075 - 44964022
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||    
T  44964075 ggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagttt 44964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 4030310 - 4030390
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattc-ttttagtttgacataattc 259  Q
    ||||||||||||||||||| | |||||| ||||||||||||| ||||||| || ||| | | ||||||||||||| |||||    
T  4030310 cttttagtttgacaaaattcttaagttaatcctttaagtttcgaaagtttcaattaggtcctttttagtttgacagaattc 4030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 4030310 - 4030362
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    |||||||||||||| |||||| ||||||||||||||| |||| ||||||||||    
T  4030310 cttttagtttgacaaaattcttaagttaatcctttaagtttcgaaagtttcaa 4030362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 49651057 - 49651014
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  49651057 ttttagtttgacagaattctcaagttagtcctttaagtttcaaa 49651014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 2965499 - 2965565
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||  |||| ||||||||  ||||||| |||||||||||| ||||| |||||||||||    
T  2965499 ttttagtttgaccgaattttcaagttatacctttaagtttcaaaagttttaaatatgtcattttagt 2965565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 11897850 - 11897916
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||| ||||||||||||| || ||||| |||| |||||||||| || ||| |||||||    
T  11897850 ttttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagt 11897916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 44963903 - 44963961
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    ||||||||||||||| |  |||  ||| |||||||||||||||||||||||||||||||    
T  44963903 gtccttttagtttgataggattcccaaattagtcctttaagtttcaaaagttttaaata 44963961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 39302317 - 39302406
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||  |||| | |||||||||||||| ||||  ||| ||| | |||||||||||||||||||  | ||| |||||||||||    
T  39302317 ggccaaataccacttttgtttcttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagtt 39302406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 39302336 - 39302388
Alignment:
Q  238 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttc 290  Q
    |||||||||||||||| ||||| ||| ||||| |||||| |||||||||||||    
T  39302336 ttcttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttc 39302388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 10685855 - 10685922
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||| |||||||| |||||||| |||| || ||||||| || ||| |||||||    
T  10685855 cttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagt 10685922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Original strand, 26069789 - 26069827
Alignment:
Q  269 tcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  26069789 tcctttaaatttcaaaagtctcaaacaagtcattttagt 26069827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 44963847 - 44963961
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||||||||| | | || | |||| ||||||||||||||| ||||||| ||  |  | |||||||||||| |  |||| ||| ||| |||||||| |||    
T  44963847 ttttagtttgatagatttctaaagtaagtcctttaagtttcgaaagtttcaataaagtccttttagtttgataggattcccaaattagtcctttaagttt 44963946  T
Q  281 caaaagtttcaaata 295  Q
    ||||||||| |||||    
T  44963947 caaaagttttaaata 44963961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Complemental strand, 27351652 - 27351603
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagttt 289  Q
    |||||| |||||||||||||||||||| || |||||| |||| |||||||    
T  27351652 cttttaatttgacataattctcaagttgatactttaagtttcgaaagttt 27351603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 174 - 307
Target Start/End: Complemental strand, 658 - 525
Alignment:
Q  174 ttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 273  Q
    |||||||||||| ||||| | ||||||||||||||||||||||||||  ||||||| || ||| | |||||| ||||||| ||||||||||||| |||||    
T  658 ttggtccttttaatttgatagaattttcaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctt 559  T
Q  274 taaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||||||| |||||||||||    
T  558 taaatttcaaaagtttcaaataggtcattttagt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 21 - 154
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||  |||||  |||||| |  |    
T  21 tttggtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaattcctaagttagt-at 119  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| ||| |||||||||||||| |||||||||||    
T  120 ttaagtttgaaaagtttcaaatatgtcattttagt 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 26330066 - 26329937
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 277  Q
    |||||||||||| ||| ||||  ||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||| || |||||     
T  26330066 tccttttagttttacagaattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacataattcccaagttagtcatttaag 26329967  T
Q  278 tttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||||| |||||||||||    
T  26329966 tttcaaaagtttcaaataggtcattttagt 26329937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 26330145 - 26329997
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||||||||  ||||||| || ||||| |||||||||| ||| ||||    
T  26330145 ggccaaataccacttttagtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaatt 26330046  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    | ||||||| |||||||| |||||||||||||||||| ||| |||||||    
T  26330045 cccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagt 26329997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 163 - 307
Target Start/End: Complemental strand, 43098546 - 43098402
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||| ||||||||||||||||||||| |||||  || ||||| ||||||||||| ||||||| || ||| | |||||||||||||| ||||| ||    
T  43098546 aaataccatttttggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattccca 43098447  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||    
T  43098446 agttagtcctttaagtttcaaaagtttcaaatatgtcattttagt 43098402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 159 - 269
Target Start/End: Original strand, 19631749 - 19631859
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||| || |||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||    
T  19631749 ggccaaatatcacgtttggtccttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatt 19631848  T
Q  259 ctcaagttaat 269  Q
    |||||||||||    
T  19631849 ctcaagttaat 19631859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 8408340 - 8408476
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||         ||||| |||||||||||||| |||||||    
T  8408340 caaatatcaagtttggtccttttagtttgacaaaatttccaagttagttctttaagtttcaaa---------tagatccttttagtttgacaaaattctc 8408430  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| | || ||||| ||| ||||||||||||||||||||||||||    
T  8408431 aagtaagtcttttaagtttgaaaagtttcaaataagtcattttagt 8408476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 180 - 305
Target Start/End: Original strand, 9320017 - 9320142
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 279  Q
    ||||||||||||||||||| ||||||||||  |||||||||| ||||||| || ||  |||||||||||||||| ||||||||| ||| || ||||||||    
T  9320017 cttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaatt 9320116  T
Q  280 tcaaaagtttcaaataagtcatttta 305  Q
    ||||||||||||||||  ||||||||    
T  9320117 tcaaaagtttcaaatagatcatttta 9320142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 2789036 - 2788928
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||| ||||||||||||| || ||||    
T  2789036 ggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagtcattta 2788937  T
Q  276 aatttcaaa 284  Q
    | |||||||    
T  2788936 agtttcaaa 2788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 2789092 - 2788965
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 279  Q
    ||||||||||||||||||||| || ||||||||||||||||   |||||| || ||| |  ||||||||||||| |||| |||||||| |||||||| ||    
T  2789092 cttttagtttgacaaaatttttaaattagtcctttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtt 2788993  T
Q  280 tcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||| |||||||||||    
T  2788992 tcaaaagtttcaaataggtcattttagt 2788965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 164 - 305
Target Start/End: Original strand, 52181706 - 52181847
Alignment:
Q  164 aataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa 263  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||| |||||| |||  ||||||| ||  |  | |||||||||||||| ||||| |||    
T  52181706 aataccatttttgatccttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaa 52181805  T
Q  264 gttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    |||| |||||||| |||||||||||||||| | |||||||||    
T  52181806 gttagtcctttaagtttcaaaagtttcaaacatgtcatttta 52181847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 22025439 - 22025292
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    |||||||||| |  ||| ||| ||||||||||||| |||| |||||||||||||| ||||||| ||||||| || ||| |||||||||||||||| ||||    
T  22025439 ggccaaatacaacttttagtcattttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtttgacagaatt 22025340  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    | ||||||| |||||| || |||||| |||||||||| || ||||||||    
T  22025339 cccaagttagtccttt-aagttcaaaggtttcaaataggtaattttagt 22025292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 290
Target Start/End: Original strand, 35046437 - 35046545
Alignment:
Q  182 tttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttc 281  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||||| |||||  || ||| |||||||| ||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttc 35046536  T
Q  282 aaaagtttc 290  Q
    |||||||||    
T  35046537 aaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 42116144 - 42116069
Alignment:
Q  161 ccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42116144 ccaaataccatttttggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaatag 42116069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 8408984 - 8408850
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||| ||| ||  |  |||||||||||||||| |||| |||||||| || |    
T  8408984 tttggtcattttagtttgacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgacagaattttcaagttagtcat 8408885  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| |||||||||||||||||| ||||| |||||    
T  8408884 ttaagtttcaaaagtttcaaataggtcatcttagt 8408850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 175 - 284
Target Start/End: Original strand, 41735814 - 41735923
Alignment:
Q  175 tggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttt 274  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||| |||||| | |||||||||||||| ||||  ||||| | ||||||    
T  41735814 tggtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatttccaagtcagtccttt 41735913  T
Q  275 aaatttcaaa 284  Q
    ||||||||||    
T  41735914 aaatttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 163 - 284
Target Start/End: Complemental strand, 52183558 - 52183437
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||| || |||   |||||||||||||| ||||| ||    
T  52183558 aaataccacgtttggtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattccca 52183459  T
Q  263 agttaatcctttaaatttcaaa 284  Q
    ||  | |||||||| |||||||    
T  52183458 agccagtcctttaagtttcaaa 52183437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 41735743 - 41735886
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||||||  ||||||||||||||||| |||| ||| |||||||||| |||| |||||  ||||||| || | | | |||||||||| ||||||||| ||    
T  41735743 aaataccacttttggtccttttagtttaacaagattctcaagttagttcttttagttttgaaagtttcaactgg-tccttttagtttaacataattccca 41735841  T
Q  263 agttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||| |||||||||||||||||| ||| |||||||    
T  41735842 agttagtcctttaagtttcaaaagtttcaaataggtccttttagt 41735886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 176 - 284
Target Start/End: Complemental strand, 43098473 - 43098365
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 275  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||  |  ||||||||| ||| ||||| ||||||| |||||||    
T  43098473 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaatatgtcattttagtttaacagaattcccaagttagtccttta 43098374  T
Q  276 aatttcaaa 284  Q
    | |||||||    
T  43098373 agtttcaaa 43098365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 2909182 - 2909287
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 279  Q
    |||||||||| ||| |||| |||||||||| ||||||||||| ||||| | || ||| |||||||||||| ||| ||||||||||||| |||||||||||    
T  2909182 cttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagttttacagaattctcaagttagtcctttaaatt 2909281  T
Q  280 tcaaaa 285  Q
    ||||||    
T  2909282 tcaaaa 2909287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 295
Target Start/End: Original strand, 5387131 - 5387248
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 277  Q
    |||||||||||||||  |||||  ||||||||||||||||||| |||||||| || || ||  ||||||||||||| ||||| |||||||  |||||||     
T  5387131 tccttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaag 5387230  T
Q  278 tttcaaaagtttcaaata 295  Q
    ||||||||||||||||||    
T  5387231 tttcaaaagtttcaaata 5387248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 284
Target Start/End: Original strand, 52865942 - 52866067
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  ||| ||||||||||||||||| |||| |||||||||||||||||||||  ||||||| || ||  |||||||||||||||| |||     
T  52865942 ggccaaataccactttttgtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatg 52866041  T
Q  259 ctcaagttaatcctttaaatttcaaa 284  Q
    |||||  || |||||||| |||||||    
T  52866042 ctcaatctagtcctttaagtttcaaa 52866067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 178 - 277
Target Start/End: Original strand, 2788795 - 2788894
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaa 277  Q
    ||||||||||||||  ||||| |||||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||||||||||| | |||||||    
T  2788795 tccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtactttaaa 2788894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 307
Target Start/End: Original strand, 43098171 - 43098312
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||  |||||||||||||||||||||||||||  |||||||||||||||||||  ||||||| || ||| | ||||||||||  || | |||      
T  43098171 caaataccacttttggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtttaccagagttccg 43098270  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| ||    || |||||||||||||||||||||| |||||||    
T  43098271 aagttagtc----aagtttcaaaagtttcaaataagtccttttagt 43098312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 31229254 - 31229377
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcc 271  Q
    ||||||| ||||| ||||||| ||||||||| |||||||||| ||||||| ||||||| |  ||| |  ||||||||||| | ||||||||||||| ||     
T  31229254 tttggtctttttaatttgacagaattttcaaattagtccttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagttagtca 31229353  T
Q  272 tttaaatttcaaaagtttcaaata 295  Q
    ||||| ||||||||||||||||||    
T  31229354 tttaagtttcaaaagtttcaaata 31229377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 284
Target Start/End: Complemental strand, 30543254 - 30543141
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||| ||||||||||||||||| ||||||||||||| ||| ||| ||||||||||||         ||||||  |||||||||||||||| |||| ||    
T  30543254 caaatatcatgtttggtccttttaatttgacaaaatttccaaattaatcctttaagttt---------taaatattttcttttagtttgacaaaattatc 30543164  T
Q  262 aagttaatcctttaaatttcaaa 284  Q
    |||||| ||||||||||||||||    
T  30543163 aagttagtcctttaaatttcaaa 30543141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 52567732 - 52567806
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    |||||| || |||||||||||||||||||||| |||| | ||||||||| |||||||||||||||||||||||||    
T  52567732 caaatatcacgtttggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaatag 52567806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 280
Target Start/End: Complemental strand, 23085340 - 23085224
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    ||||| ||| |||||| |||||||||||||| || ||| ||||||||| |||||||||||||||||| || |||| ||||||||||| | | |||| |||    
T  23085340 aaatatcatttttggttcttttagtttgacagaaattttaagttagtc-tttaagtttcaaaagtttcaattagaatcttttagttttatagaattttca 23085242  T
Q  263 agttaatcctttaaattt 280  Q
    | ||| ||||||||||||    
T  23085241 aattagtcctttaaattt 23085224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 44916371 - 44916324
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44916371 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 52866429 - 52866366
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaa 225  Q
    ||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||||    
T  52866429 caaataccatgtttggttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaa 52866366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 52568311 - 52568197
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaattt 280  Q
    ||||||||||||| || |  ||| ||||| |||||| |||||||||||| || ||| |  ||||||||||| | ||||||||||| | |||||||| |||    
T  52568311 ttttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtttgatagaattctcaagtcagtcctttaagttt 52568212  T
Q  281 caaaagtttcaaata 295  Q
    |||||||||||||||    
T  52568211 caaaagtttcaaata 52568197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 19632320 - 19632248
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    ||||||| || ||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||||||    
T  19632320 caaatacgatttttggtccttttagtttgacagaattctcaaattagt-ctttaagtttcaaaagttttaaata 19632248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 31229318 - 31229390
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||| ||||||||||| | |||| ||||||||||| |||||||||||||||||| |||||| |||||||||||    
T  31229318 ggtctttttagtttgatagaattctcaagttagtcatttaagtttcaaaagtttcaaataggttcttttagtt 31229390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 35046642 - 35046550
Alignment:
Q  202 aagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaat 294  Q
    |||||||| ||||||||||| |||||||||| | |    ||||||||||||||||||| ||||||| |||||||| |||||||||||| ||||    
T  35046642 aagttagtgctttaagtttcgaaagttttaatttggccattttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 2508252 - 2508323
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat 234  Q
    |||||| || |||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||    
T  2508252 aaatactatttttgatccttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat 2508323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 22025358 - 22025274
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagt 265  Q
    |||||||||||||| ||||  ||||||||||||||||||| |||| |||| |||||| |  ||||||||||||| |||||||||||    
T  22025358 cttttagtttgacagaattcccaagttagtcctttaagtt-caaaggtttcaaataggtaattttagtttgacagaattctcaagt 22025274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 26329826 - 26329879
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  26329826 ggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagttt 26329879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 35046603 - 35046550
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaat 234  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttttaaat 35046550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 26330008 - 26329948
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    |||||||||||||||||| ||||  |||||||||| |||||||||||||||||| ||||||    
T  26330008 ggtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaatag 26329948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 5387194 - 5387261
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||| ||||  |||||||| |||||||||||||||||||| ||||||||  ||||||||    
T  5387194 ttttagtttgacagaattcccaagttagccctttaagtttcaaaagtttcaaatagatctttttagtt 5387261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 52567750 - 52567817
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||||| |||||| || ||||| |||||||||||| ||||| |||||||||||    
T  52567750 cttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagt 52567817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 52568256 - 52568189
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttt 243  Q
    |||| ||||||||||| | |||| |||||| ||||||||||||||||||||||| |||||||| ||||    
T  52568256 ggtcattttagtttgatagaattctcaagtcagtcctttaagtttcaaaagtttcaaatagatccttt 52568189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 52568311 - 52568245
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||| || ||| ||| | |||||||||||||||||||||| || |||||||||||    
T  52568311 ttttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagt 52568245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 5387706 - 5387623
Alignment:
Q  211 ctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaata 295  Q
    |||||||||| | |||||| ||||| ||| ||||||||||||| |||||| |||| |  ||||||||||| ||||||||||||||    
T  5387706 ctttaagttttataagtttcaaataaatt-ttttagtttgacaaaattcttaagtaagacctttaaattttaaaagtttcaaata 5387623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 22025116 - 22025188
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    |||| ||||||||||||| |||| | |||||||||| ||||| || |||||||| |||||| |||||||||||    
T  22025116 ggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagtt 22025188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 2508751 - 2508684
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||| ||||| |||||||| |||||| |||||||| ||||||||||||||||||  | |||||||||    
T  2508751 ttttaatttgataaaatttttaagttactcctttaaatttcaaaagttttaaatatgtccttttagtt 2508684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 19631770 - 19631837
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| ||||||| ||||||||||||| |||||||| |||| |||||||||| || ||| |||||||    
T  19631770 cttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagt 19631837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 19632302 - 19632236
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| ||||||||| ||| || ||||| |||||||||||| ||||| |||||||||||    
T  19632302 cttttagtttgacagaattctcaaattagtc-tttaagtttcaaaagttttaaatatgtcattttagt 19632236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 248
Target Start/End: Complemental strand, 35024036 - 35023969
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||| ||| |||| ||||||||||| ||||||||| ||||||||| ||| ||| |||||||||    
T  35024036 ttttagttttacacaattctcaagttagtcttttaagttttaaaagtttttaattgatccttttagtt 35023969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 304
Target Start/End: Original strand, 36890399 - 36890542
Alignment:
Q  164 aataccatgtttggtccttttagtttgacaaaattttcaagttagtcctt-taagtttcaaaagttttaaatagattcttttag-tttgacataattctc 261  Q
    |||||||  ||||||||||||||| ||||  ||||  ||||| ||||||| |||||||  ||||||| || |||||  |||| | ||||||| |||||      
T  36890399 aataccacttttggtccttttagtatgactgaattcccaagtcagtccttctaagttttgaaagtttcaattagatcatttttggtttgacagaattccg 36890498  T
Q  262 aagttaa-tcctttaaatttcaaaagtttcaaataagtcatttt 304  Q
    ||||| | || ||||| |||||||||||||||||||||||||||    
T  36890499 aagtttagtcttttaagtttcaaaagtttcaaataagtcatttt 36890542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 19681184 - 19681279
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 259  Q
    |||||||||| ||||||||||  ||||||||  |||| ||||||||||  |||||||||| ||| ||| || |||||  ||||||||||||| |||||    
T  19681184 caaataccatttttggtcctt--agtttgaccgaattctcaagttagttttttaagtttcgaaattttcaattagatcattttagtttgacagaattc 19681279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 293
Target Start/End: Original strand, 26329805 - 26329883
Alignment:
Q  215 aagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaa 293  Q
    ||||||| ||||||| || ||| | |||||||||||||| ||||  |||||||  ||||||| ||||||||||||||||    
T  26329805 aagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaaa 26329883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 9320015 - 9320084
Alignment:
Q  238 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||||| ||||||||||||| |  ||||| |||| |||||||||| |||||  |||||||    
T  9320015 ttcttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagt 9320084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 42115652 - 42115705
Alignment:
Q  253 ataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttag 306  Q
    ||||||||||||||| |||||||| | |||||||||| ||||||||| ||||||    
T  42115652 ataattctcaagttagtcctttaagtctcaaaagttttaaataagtccttttag 42115705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 42115654 - 42115694
Alignment:
Q  195 aattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    |||| ||||||||||||||||||| ||||||||||||||||    
T  42115654 aattctcaagttagtcctttaagtctcaaaagttttaaata 42115694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 305
Target Start/End: Complemental strand, 42116124 - 42116060
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    ||||||||||||| |||| | |||||| |||||||| |||||||||||| ||||| ||| |||||    
T  42116124 ttttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttttaaataggtcttttta 42116060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 52183541 - 52183489
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    |||||||||| ||| ||||||||||||| |||||||| |||| ||||||||||    
T  52183541 cttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaa 52183489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 2788797 - 2788864
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||||||||||   ||||||||||||| |||||||| |||| |||||||||| || ||| |||||||    
T  2788797 cttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagt 2788864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 26329762 - 26329809
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagtt 206  Q
    ||||||||||||| ||||||||||||| ||||||| |||| |||||||    
T  26329762 ggccaaataccatttttggtccttttaatttgacagaattctcaagtt 26329809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 35046493 - 35046544
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    |||||||||||||||| ||||   || |||||||||||||||||||||||||    
T  35046493 tccttttagtttgacagaattcctaaattagtcctttaagtttcaaaagttt 35046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 36890540 - 36890583
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||| ||||||| ||||| ||||||||||||||||||||||||    
T  36890540 ttttaatttgacataatttccaagttagtcctttaagtttcaaa 36890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 36890704 - 36890637
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||| | ||||||||| ||||| ||| ||||||||  |||| |||||||||||    
T  36890704 cttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagt 36890637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 229
Target Start/End: Complemental strand, 36890706 - 36890655
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    |||||||||||||||| |||||| |||||| || ||||||||| ||||||||    
T  36890706 tccttttagtttgacagaatttttaagttaatcatttaagttttaaaagttt 36890655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 52866413 - 52866366
Alignment:
Q  238 ttcttttagtttgacataattctcaagttaatcctttaaatttcaaaa 285  Q
    |||||||||||||||| ||||| ||||||| |||||||| ||||||||    
T  52866413 ttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaa 52866366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 2508269 - 2508323
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaat 294  Q
    |||||||||||||| ||||  ||||||| ||||||||  ||||||||||||||||    
T  2508269 cttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaaat 2508323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 2508751 - 2508685
Alignment:
Q  241 ttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| ||||| | |||| | |||||| ||||||||||||||||||||| ||||| ||| |||||||    
T  2508751 ttttaatttgataaaatttttaagttactcctttaaatttcaaaagttttaaatatgtccttttagt 2508685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 41736015 - 41735958
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaa 216  Q
    ||||||||||||  |||| |||||||||||||||| ||||  ||||||||| ||||||    
T  41736015 ggccaaataccacttttgatccttttagtttgacagaattcccaagttagtactttaa 41735958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 52865963 - 52866012
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagttt 289  Q
    |||||||||||||| ||||||||||||| |||||||| |||  |||||||    
T  52865963 cttttagtttgacagaattctcaagttagtcctttaagttttgaaagttt 52866012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 2788853 - 2788893
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaa 216  Q
    |||||||||||||||||| |||| |||||||||| ||||||    
T  2788853 ggtccttttagtttgacagaattctcaagttagtactttaa 2788893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 22025052 - 22025100
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagtta 207  Q
    ||||||||||||  ||||||||||||||||||||| ||||  |||||||    
T  22025052 ggccaaataccacttttggtccttttagtttgacagaattcccaagtta 22025100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 23085212 - 23085172
Alignment:
Q  181 ttttagtttgacaaaattttcaagttagtcctttaagtttc 221  Q
    |||||||||||||||||| |||| |||||||||||| ||||    
T  23085212 ttttagtttgacaaaattatcaaattagtcctttaaatttc 23085172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 269 - 305
Target Start/End: Original strand, 33693290 - 33693326
Alignment:
Q  269 tcctttaaatttcaaaagtttcaaataagtcatttta 305  Q
    |||||||||||||||||||| |||||||||| |||||    
T  33693290 tcctttaaatttcaaaagttccaaataagtcctttta 33693326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 44916368 - 44916324
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaa 284  Q
    |||||||||||||| |||| |||||||| |||||||| |||||||    
T  44916368 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 174 - 307
Target Start/End: Original strand, 28545 - 28678
Alignment:
Q  174 ttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctt 273  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||  ||||||| || ||| | |||||| ||||||| ||||||||||||| |||||    
T  28545 ttggtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctt 28644  T
Q  274 taaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| ||||||||||||||||| |||||||||||    
T  28645 taaaattcaaaagtttcaaataggtcattttagt 28678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 31247782 - 31247634
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||| ||  ||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||| || ||| | ||||||||| |||| ||||    
T  31247782 ggccaaatatcacttttggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacagaatt 31247683  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    | ||||||| | |||||| |||||||||||||||||| |||||||||||    
T  31247682 cccaagttagtgctttaagtttcaaaagtttcaaatatgtcattttagt 31247634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 3087086 - 3087190
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaa 276  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||| |||||    
T  3087086 gtccttttaatttgatagaattttcaagttagtc-tttaagtttcaaaagttttaaataaatccttttagtttgacagaattctcaagtaaatcttttaa 3087184  T
Q  277 atttca 282  Q
    ||||||    
T  3087185 atttca 3087190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 173 - 307
Target Start/End: Original strand, 4276135 - 4276269
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||||||  ||||||| || ||  |  |||||||||||||||||| | | |||| | ||    
T  4276135 tttggtccttttagtttgacaatatttttaagttagttctttaagttttgaaagtttcaattaagtctttttagtttgacataatttttatgttagttct 4276234  T
Q  273 ttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||| ||||||||||||||||||  ||||||||||    
T  4276235 ttaagtttcaaaagtttcaaatagttcattttagt 4276269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 307
Target Start/End: Original strand, 35555516 - 35555661
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttag-tcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    ||||| || ||||||||||||||  |||||| ||||  |||||||| || |||||||||||||||||| || || ||  ||||||||||||| |||| ||    
T  35555516 aaatatcacgtttggtccttttaaattgacagaattcacaagttagatcttttaagtttcaaaagtttcaattaaatcattttagtttgacagaattatc 35555615  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| ||| ||||||||  |||||||||||||| ||||||||||    
T  35555616 aagttagtccattaaattttgaaagtttcaaataaatcattttagt 35555661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 50530235 - 50530336
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||| ||| |||| |||||||||||||||| ||||||||| |||||| |||||||||||||||| |||| ||| |  ||||||||||||| |||||||    
T  50530235 caaatatcatttttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacagaattctc 50530334  T
Q  262 aa 263  Q
    ||    
T  50530335 aa 50530336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 307
Target Start/End: Original strand, 21376554 - 21376700
Alignment:
Q  161 ccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattct 260  Q
    ||||||| ||| ||| ||||||||| ||||||  || ||| ||||||| | ||||| ||| ||||||||||| ||  |||||||||||||| | |||| |    
T  21376554 ccaaatatcatttttagtccttttaatttgactgaacttttaagttagacttttaaattttaaaagttttaattaagttcttttagtttgatagaatttt 21376653  T
Q  261 caagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    || |||  |||||||| |||||||||||| ||||| |||||||||||    
T  21376654 caggttggtcctttaagtttcaaaagttttaaatatgtcattttagt 21376700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 293
Target Start/End: Complemental strand, 54456912 - 54456799
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatt 279  Q
    |||||||||||| | || || ||| ||| ||| |||||| |||||||||| |||||| | |||||| ||||||||||||  ||||||| |||||||| ||    
T  54456912 cttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatttgacataatttccaagttagtcctttaagtt 54456813  T
Q  280 tcaaaagtttcaaa 293  Q
    ||||||||||||||    
T  54456812 tcaaaagtttcaaa 54456799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 284
Target Start/End: Complemental strand, 3088217 - 3088106
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||||||| ||||||||||||| | |||||| |||| ||||||| || ||  | ||||||||||||||| |||  | ||||| ||||    
T  3088217 tttggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgacatgatttcctagttagtcct 3088118  T
Q  273 ttaaatttcaaa 284  Q
    |||| |||||||    
T  3088117 ttaagtttcaaa 3088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 21377136 - 21377037
Alignment:
Q  160 gccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattc 259  Q
    |||||||| || |||||||||||||||||||||| ||||| ||||||| | |||||| |||| ||||||| || ||| |  |||||||||||||||||||    
T  21377136 gccaaataacacgtttggtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtttgacataattc 21377037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 31247178 - 31247252
Alignment:
Q  224 aagttttaaatagattcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtc 299  Q
    |||||||||||| || |||||||||||||| ||||||||||||| | |||||| ||||||||||||||||||||||    
T  31247178 aagttttaaatatatccttttagtttgacaaaattctcaagttagt-ctttaagtttcaaaagtttcaaataagtc 31247252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 305
Target Start/End: Complemental strand, 54456979 - 54456847
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    ||||||||||||||||| | | |||| ||||||||| |||||||||||  |||| || || |||||||||||||||||| | || |  ||| ||| |||     
T  54456979 tttggtccttttagtttaatagaattctcaagttagccctttaagtttagaaagcttcaattagattcttttagtttgatagaacttccaaattattccc 54456880  T
Q  273 ttaaatttcaaaagtttcaaataagtcatttta 305  Q
    |||| | |||||||||||||||| ||| |||||    
T  54456879 ttaagtatcaaaagtttcaaataggtcctttta 54456847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 14629271 - 14629336
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    |||||||||| | |||||||||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  14629271 ggccaaatactacgtttggtccttttactttgacagaattcccaagttagtcctttaagtttcaaa 14629336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 31247192 - 31247248
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  31247192 tccttttagtttgacaaaattctcaagttagt-ctttaagtttcaaaagtttcaaata 31247248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 54456856 - 54456803
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttt 229  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  54456856 ggtccttttaatttgacataatttccaagttagtcctttaagtttcaaaagttt 54456803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 5505800 - 5505728
Alignment:
Q  178 tccttttagtttgacaaaattttcaagttagtccttt-aagtttcaaaagttttaaatagattcttttagttt 249  Q
    ||||||| |||||||| |||||  || |||||||||| |||||||||||||||||||||||| ||||||||||    
T  5505800 tcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagttt 5505728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 3088210 - 3088143
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| |||| |||||||||| ||||||||||| |||||||||| || ||| |||||||    
T  3088210 cttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagt 3088143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 14964737 - 14964784
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||    
T  14964737 gtccttttagtttgacagaattttcaagttagtcttttaagtttcaaa 14964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 21377116 - 21377049
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||||||||||| ||||  ||||||||| ||||||||||| |||||||||| || |||||||||||    
T  21377116 cttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagt 21377049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 24707471 - 24707542
Alignment:
Q  177 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtt 248  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||  ||||||||||||| ||  ||||||||    
T  24707471 gtccttttagttttacagaatttccaagttagtcctttaagttttcaaagttttaaatatatcattttagtt 24707542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 35556038 - 35555987
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    |||||||||||||||||| |||||||  ||||||| ||||||||||||||||    
T  35556038 tttggtccttttagtttggcaaaattcccaagttaatcctttaagtttcaaa 35555987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 50530459 - 50530397
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 224  Q
    |||||||||| |||| |||||||||||| ||  |||||  |||||||||||||||||||||||    
T  50530459 caaataccatttttgatccttttagtttcacttaatttctaagttagtcctttaagtttcaaa 50530397  T

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Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 284
Target Start/End: Complemental strand, 4276741 - 4276629
Alignment:
Q  163 aaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctca 262  Q
    |||||||||||||||| |||||||||||||| ||||  ||| | | |||||||||||||         || |||||  ||||||||||||| ||||| ||    
T  4276741 aaataccatgtttggtacttttagtttgacagaattcccaaataaatcctttaagtttc---------aattagatcattttagtttgacagaattccca 4276651  T
Q  263 agttaatcctttaaatttcaaa 284  Q
    ||||| |||||||| |||||||    
T  4276650 agttagtcctttaagtttcaaa 4276629  T

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Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 54456660 - 54456733
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    |||||| ||| |||| |||||||||||||||| |||||  || |||||| |||||||||| ||||||| |||||    
T  54456660 caaatatcatttttgatccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaaata 54456733  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 18745563 - 18745502
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagttt 220  Q
    |||||||||| || ||||||||||| | ||||| |||||| |||| ||||| ||||||||||    
T  18745563 ggccaaatacaatttttggtcctttaaatttgataaaattatcaaattagtactttaagttt 18745502  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 235
Target Start/End: Original strand, 19153884 - 19153940
Alignment:
Q  180 cttttagtttgacaaaattt-tcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    |||||||||||||| ||||| ||||||||||  ||||||||||||| |||| |||||    
T  19153884 cttttagtttgacagaatttgtcaagttagttatttaagtttcaaatgtttcaaata 19153940  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 35556031 - 35555987
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaa 284  Q
    ||||||||||| || ||||| |||||||||||||||| |||||||    
T  35556031 cttttagtttggcaaaattcccaagttaatcctttaagtttcaaa 35555987  T

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Target: scaffold0019 (Bit Score: 72; Significance: 9e-33; HSPs: 3)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 162 - 293
Target Start/End: Original strand, 124132 - 124262
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||||||  ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| || | |||||||||||||| ||||| |    
T  124132 caaataccacttttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattccc 124231  T
Q  262 aagttaatcctttaaatttcaaaagtttcaaa 293  Q
    || ||| | |||||| ||||||||||||||||    
T  124232 aatttagt-ctttaagtttcaaaagtttcaaa 124262  T

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Target: scaffold0019; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 307
Target Start/End: Complemental strand, 124495 - 124347
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataatt 258  Q
    ||||||||||||  |||||||||||| |||||| | ||||  ||||||||||||||||||||| ||||||| || ||| | |||||||||||||| ||||    
T  124495 ggccaaataccacttttggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatt 124396  T
Q  259 ctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
      ||||||| |||||||| |||| |||||||||| || ||| |||||||    
T  124395 tccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagt 124347  T

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Target: scaffold0019; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 124418 - 124328
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagtt 266  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| || ||| |  ||||||||||||| ||||| ||||||    
T  124418 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaattcccaagtt 124328  T

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Target: scaffold0041 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 45327 - 45205
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatcct 272  Q
    |||||||||||| |||||||| |||| ||||||||||| ||||||||| |||||||| || ||| | ||||||||||||||||||| |||| ||| || |    
T  45327 tttggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcat 45228  T
Q  273 ttaaatttcaaaagtttcaaata 295  Q
    |||| ||| ||||||||||||||    
T  45227 ttaagttttaaaagtttcaaata 45205  T

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Target: scaffold0041; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 45264 - 45177
Alignment:
Q  176 ggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctcaa 263  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||| |||||||| |||||||| |||||| ||||||| |||||||||    
T  45264 ggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagtttcaaatagatccttttaatttgacagaattctcaa 45177  T

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Target: scaffold0041; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 45320 - 45253
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    ||||| |||||||||||||||||||||| || ||||| ||| ||||||||||| || ||| |||||||    
T  45320 cttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagt 45253  T

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Target: scaffold0027 (Bit Score: 62; Significance: 8e-27; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 161 - 274
Target Start/End: Complemental strand, 10009 - 9896
Alignment:
Q  161 ccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattct 260  Q
    ||||||| || |||| ||||||||||||||||| |||| |||||||||| ||||||||||| ||||||| || ||| | ||||||||||||||||||||     
T  10009 ccaaatatcacgtttcgtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcc 9910  T
Q  261 caagttaatccttt 274  Q
    ||||||| ||||||    
T  9909 caagttagtccttt 9896  T

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Target: scaffold0027; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 162 - 284
Target Start/End: Original strand, 9383 - 9505
Alignment:
Q  162 caaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatagattcttttagtttgacataattctc 261  Q
    |||||| ||| ||| ||||||||||||||||| |||| | ||||||||| ||||||||||  |||||| || ||| | |||||||||| | | |||||||    
T  9383 caaatatcatttttcgtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaatagaattctc 9482  T
Q  262 aagttaatcctttaaatttcaaa 284  Q
    |||||| | |||||| |||||||    
T  9483 aagttagttctttaagtttcaaa 9505  T

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Target: scaffold0027; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 292
Target Start/End: Complemental strand, 9990 - 9938
Alignment:
Q  240 cttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaa 292  Q
    |||||||||||||| ||||||||||||| | |||||| |||| ||||||||||    
T  9990 cttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaa 9938  T

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Target: scaffold0374 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 16173 - 16236
Alignment:
Q  173 tttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaatag 236  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||||| |||||||||||||||    
T  16173 tttggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaatag 16236  T

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Target: scaffold0374; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 16059 - 16128
Alignment:
Q  159 ggccaaataccatgtttggtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagtt 228  Q
    ||||||||||||  |||| || ||||||||| |||||||| | ||||||||| |||||||||||||||||    
T  16059 ggccaaataccacttttgatcattttagtttcacaaaattcttaagttagtcttttaagtttcaaaagtt 16128  T

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Target: scaffold0374; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 16665 - 16597
Alignment:
Q  239 tcttttagtttgacataattctcaagttaatcctttaaatttcaaaagtttcaaataagtcattttagt 307  Q
    |||||| |||||| | ||||  |||||||||||||||| ||| |||||||| |||||||||||||||||    
T  16665 tctttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaataagtcattttagt 16597  T

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Target: scaffold0374; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 16664 - 16609
Alignment:
Q  180 cttttagtttgacaaaattttcaagttagtcctttaagtttcaaaagttttaaata 235  Q
    ||||| |||||| ||||||| ||||||| |||||||||||| ||||||||||||||    
T  16664 ctttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttttaaata 16609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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