View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0115_low_6 (Length: 298)
Name: NF0115_low_6
Description: NF0115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0115_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 2768424 - 2768174
Alignment:
| Q |
1 |
cctaagcctcctcgtactacacataaattacttcaggtaatctcattttaacacttggaagtgctaattgatgaggaaaataaaaactgttatcttcgtt |
100 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2768424 |
cctaagcctcctcgtacgacacataaattacttcaggtaatctcattttaacacttggaagtgctaattgatgaggaaaataaaaactgttatcttcgtt |
2768325 |
T |
|
| Q |
101 |
aactgatgttaacgtctttcttcagtttatcgtatgctttttaacacccgttgcatcaaagcattataacctataa-ggtataccatcctactttaacat |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
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| T |
2768324 |
aactgatgttaacgtctttcttcagtttatcgtatgctttttaacacccgttgcatcaaagcattataacctataagggtataccatcctactttagcat |
2768225 |
T |
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| Q |
200 |
atgtttggatgcgtggctgtaactttttcttgcatccctatgctactccac |
250 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
2768224 |
atgtttggatgcgtggctgtaactttttcttgcatccctatgctattccac |
2768174 |
T |
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