View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0117_low_1 (Length: 1185)

Name: NF0117_low_1
Description: NF0117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0117_low_1
NF0117_low_1
[»] chr1 (23 HSPs)
chr1 (106-840)||(8402035-8402773)
chr1 (906-1183)||(8401693-8401971)
chr1 (906-1185)||(180024-180304)
chr1 (548-840)||(179651-179947)
chr1 (505-840)||(22348039-22348376)
chr1 (929-1185)||(22348410-22348667)
chr1 (505-679)||(18056784-18056960)
chr1 (548-662)||(23319993-23320107)
chr1 (505-679)||(45889596-45889774)
chr1 (548-644)||(30802439-30802535)
chr1 (548-620)||(37639385-37639457)
chr1 (505-620)||(16115851-16115966)
chr1 (1130-1183)||(30802828-30802881)
chr1 (548-620)||(35198131-35198203)
chr1 (1130-1185)||(45890152-45890207)
chr1 (1130-1182)||(23319515-23319567)
chr1 (1130-1185)||(18057344-18057399)
chr1 (679-730)||(23319890-23319941)
chr1 (724-766)||(13463828-13463870)
chr1 (679-719)||(18056991-18057031)
chr1 (724-767)||(18597088-18597131)
chr1 (724-767)||(18750197-18750240)
chr1 (679-718)||(45889805-45889844)
[»] chr7 (35 HSPs)
chr7 (906-1185)||(15974318-15974598)
chr7 (502-840)||(15974663-15975004)
chr7 (633-840)||(48305356-48305565)
chr7 (906-1052)||(48305629-48305776)
chr7 (633-840)||(48691112-48691323)
chr7 (534-718)||(46573348-46573536)
chr7 (906-1030)||(48691388-48691513)
chr7 (502-662)||(30428870-30429030)
chr7 (503-661)||(46024025-46024183)
chr7 (1057-1150)||(48305867-48305960)
chr7 (633-773)||(28396842-28396986)
chr7 (1060-1150)||(48691561-48691651)
chr7 (539-644)||(33797965-33798070)
chr7 (534-620)||(5757416-5757502)
chr7 (1130-1185)||(46024586-46024641)
chr7 (1130-1185)||(30430266-30430321)
chr7 (1130-1185)||(33798359-33798414)
chr7 (1130-1185)||(46573026-46573080)
chr7 (548-620)||(32090621-32090693)
chr7 (505-588)||(12279745-12279828)
chr7 (505-592)||(48690895-48690982)
chr7 (548-592)||(44141229-44141273)
chr7 (505-592)||(28396722-28396809)
chr7 (551-592)||(48691038-48691079)
chr7 (724-767)||(559892-559935)
chr7 (724-767)||(569801-569844)
chr7 (724-767)||(4185175-4185218)
chr7 (724-766)||(5200608-5200651)
chr7 (724-766)||(5209737-5209780)
chr7 (724-767)||(17515799-17515842)
chr7 (724-767)||(17537372-17537415)
chr7 (724-766)||(27967395-27967438)
chr7 (724-766)||(27976848-27976891)
chr7 (679-730)||(46024236-46024287)
chr7 (724-758)||(38411786-38411820)
[»] chr8 (33 HSPs)
chr8 (509-840)||(4836427-4836762)
chr8 (509-840)||(4841872-4842207)
chr8 (921-1185)||(39657981-39658245)
chr8 (906-1185)||(7058510-7058790)
chr8 (906-1185)||(2750427-2750707)
chr8 (906-1185)||(4836079-4836359)
chr8 (906-1185)||(4841524-4841804)
chr8 (505-840)||(7058114-7058442)
chr8 (581-840)||(2750101-2750364)
chr8 (534-840)||(8550533-8550837)
chr8 (648-840)||(39658269-39658463)
chr8 (906-1064)||(8550903-8551062)
chr8 (633-840)||(1208829-1209039)
chr8 (503-679)||(32987334-32987512)
chr8 (505-673)||(39021975-39022143)
chr8 (906-1051)||(1209110-1209259)
chr8 (505-673)||(15260748-15260917)
chr8 (1057-1150)||(1209352-1209445)
chr8 (548-644)||(7614111-7614207)
chr8 (548-620)||(15181834-15181906)
chr8 (504-592)||(1208708-1208796)
chr8 (1130-1185)||(39022525-39022580)
chr8 (724-768)||(4838725-4838769)
chr8 (1130-1174)||(32986924-32986968)
chr8 (724-766)||(36577978-36578020)
chr8 (1130-1185)||(7614500-7614555)
chr8 (724-762)||(26872669-26872707)
chr8 (724-762)||(26875127-26875165)
chr8 (681-719)||(39022186-39022224)
chr8 (679-720)||(15260666-15260707)
chr8 (1130-1182)||(15260315-15260367)
chr8 (724-767)||(23091553-23091596)
chr8 (505-572)||(42433701-42433768)
[»] chr3 (30 HSPs)
chr3 (906-1183)||(50754410-50754688)
chr3 (522-840)||(52987376-52987698)
chr3 (507-840)||(50754008-50754343)
chr3 (906-1185)||(52987039-52987310)
chr3 (505-730)||(51362275-51362503)
chr3 (906-1185)||(31852514-31852799)
chr3 (505-719)||(19385166-19385380)
chr3 (641-840)||(31852242-31852445)
chr3 (505-719)||(7045148-7045365)
chr3 (505-662)||(8718101-8718258)
chr3 (505-662)||(9069988-9070145)
chr3 (534-673)||(39099226-39099365)
chr3 (509-642)||(16277342-16277475)
chr3 (1130-1185)||(7044823-7044878)
chr3 (1130-1185)||(8718662-8718717)
chr3 (1130-1185)||(9070549-9070604)
chr3 (1130-1185)||(16277000-16277055)
chr3 (1130-1185)||(51361967-51362022)
chr3 (679-730)||(8718318-8718369)
chr3 (679-730)||(9070205-9070256)
chr3 (1130-1185)||(19384850-19384905)
chr3 (548-620)||(23699371-23699443)
chr3 (548-620)||(23717826-23717898)
chr3 (548-620)||(23736282-23736354)
chr3 (548-591)||(17627210-17627253)
chr3 (724-809)||(13603391-13603476)
chr3 (724-766)||(1005756-1005799)
chr3 (721-808)||(2216567-2216653)
chr3 (724-767)||(4444346-4444389)
chr3 (724-808)||(11262296-11262380)
[»] chr5 (26 HSPs)
chr5 (906-1185)||(2826439-2826719)
chr5 (548-840)||(2826792-2827089)
chr5 (633-840)||(34329247-34329454)
chr5 (505-719)||(28070010-28070218)
chr5 (906-1033)||(34329520-34329648)
chr5 (507-662)||(13362772-13362927)
chr5 (504-673)||(23335603-23335773)
chr5 (1057-1147)||(34329690-34329780)
chr5 (548-620)||(18465506-18465578)
chr5 (507-679)||(25017121-25017280)
chr5 (548-621)||(16668743-16668816)
chr5 (604-673)||(42512273-42512342)
chr5 (505-592)||(34329127-34329214)
chr5 (1130-1185)||(13363330-13363385)
chr5 (1130-1185)||(23335161-23335216)
chr5 (1130-1185)||(42512544-42512599)
chr5 (1131-1185)||(25016691-25016745)
chr5 (1131-1185)||(28069700-28069754)
chr5 (548-620)||(8948933-8949003)
chr5 (679-730)||(23335509-23335560)
chr5 (724-766)||(23568465-23568507)
chr5 (679-721)||(25017048-25017090)
chr5 (724-764)||(29189248-29189288)
chr5 (724-767)||(31549542-31549585)
chr5 (724-762)||(31411810-31411848)
chr5 (724-762)||(31422718-31422756)
[»] chr4 (34 HSPs)
chr4 (533-840)||(637882-638190)
chr4 (505-840)||(26447138-26447477)
chr4 (505-730)||(45255975-45256206)
chr4 (906-1064)||(638256-638415)
chr4 (548-719)||(51836937-51837113)
chr4 (906-1051)||(26446927-26447073)
chr4 (1057-1185)||(638495-638623)
chr4 (508-662)||(22181153-22181307)
chr4 (503-661)||(27764238-27764396)
chr4 (534-662)||(4168387-4168515)
chr4 (505-673)||(21097140-21097308)
chr4 (509-644)||(36621627-36621762)
chr4 (507-654)||(38485590-38485733)
chr4 (601-660)||(18923355-18923414)
chr4 (1130-1185)||(18923812-18923867)
chr4 (1130-1184)||(22180701-22180755)
chr4 (548-620)||(50563679-50563751)
chr4 (1130-1185)||(4168911-4168966)
chr4 (1130-1185)||(51836645-51836700)
chr4 (1137-1185)||(27764805-27764853)
chr4 (504-572)||(50643742-50643810)
chr4 (676-719)||(27764451-27764494)
chr4 (679-729)||(21097349-21097399)
chr4 (679-719)||(4168567-4168607)
chr4 (548-592)||(6386519-6386563)
chr4 (724-768)||(52296728-52296772)
chr4 (1130-1185)||(21097668-21097723)
chr4 (683-730)||(22181051-22181098)
chr4 (1130-1185)||(36621279-36621334)
chr4 (1130-1185)||(45256465-45256520)
chr4 (724-762)||(12997531-12997569)
chr4 (724-767)||(4749054-4749098)
chr4 (679-719)||(18923466-18923506)
chr4 (724-764)||(32215923-32215963)
[»] chr6 (21 HSPs)
chr6 (535-840)||(24737416-24737726)
chr6 (906-1185)||(877606-877881)
chr6 (505-840)||(33346098-33346436)
chr6 (548-838)||(877251-877540)
chr6 (906-1183)||(33345747-33346031)
chr6 (906-1064)||(24737192-24737351)
chr6 (1057-1185)||(24736985-24737112)
chr6 (548-620)||(18611232-18611304)
chr6 (524-620)||(29157245-29157341)
chr6 (505-592)||(34399641-34399728)
chr6 (724-808)||(3042352-3042435)
chr6 (505-620)||(15034920-15035040)
chr6 (725-761)||(5995689-5995725)
chr6 (724-808)||(20215976-20216059)
chr6 (724-808)||(22109997-22110080)
chr6 (724-808)||(24919128-24919211)
chr6 (724-767)||(24296438-24296481)
chr6 (724-767)||(24310469-24310512)
chr6 (724-767)||(27048684-27048727)
chr6 (724-767)||(27058928-27058971)
chr6 (724-766)||(30996958-30997001)
[»] chr2 (28 HSPs)
chr2 (505-840)||(25192892-25193230)
chr2 (633-840)||(4579552-4579763)
chr2 (505-730)||(18297947-18298176)
chr2 (906-1064)||(25193297-25193456)
chr2 (906-1033)||(4579360-4579488)
chr2 (504-679)||(20709773-20709950)
chr2 (1060-1147)||(4579228-4579315)
chr2 (548-620)||(25995330-25995402)
chr2 (1130-1185)||(20710318-20710373)
chr2 (548-620)||(4281738-4281810)
chr2 (506-592)||(14551297-14551382)
chr2 (717-766)||(22186082-22186131)
chr2 (1130-1185)||(18297633-18297688)
chr2 (523-595)||(4579793-4579865)
chr2 (728-807)||(17686391-17686470)
chr2 (679-726)||(20709981-20710028)
chr2 (724-762)||(20622454-20622492)
chr2 (534-592)||(36636915-36636973)
chr2 (727-808)||(28479887-28479967)
chr2 (548-592)||(5098760-5098804)
chr2 (724-767)||(33308194-33308238)
chr2 (724-767)||(21851547-21851590)
chr2 (724-767)||(21859982-21860025)
chr2 (724-766)||(25262584-25262627)
chr2 (724-767)||(27425297-27425340)
chr2 (724-767)||(27440343-27440386)
chr2 (724-767)||(39756289-39756332)
chr2 (724-757)||(34543055-34543088)
[»] scaffold0238 (2 HSPs)
scaffold0238 (502-719)||(25072-25300)
scaffold0238 (1130-1185)||(24773-24828)
[»] scaffold0097 (3 HSPs)
scaffold0097 (504-679)||(13612-13789)
scaffold0097 (1130-1185)||(14157-14212)
scaffold0097 (679-726)||(13820-13867)
[»] scaffold0194 (3 HSPs)
scaffold0194 (505-660)||(27607-27762)
scaffold0194 (1130-1185)||(28157-28212)
scaffold0194 (679-730)||(27816-27867)
[»] scaffold0337 (1 HSPs)
scaffold0337 (508-592)||(7020-7104)
[»] scaffold1120 (1 HSPs)
scaffold1120 (724-803)||(351-430)
[»] scaffold0206 (1 HSPs)
scaffold0206 (724-808)||(19467-19550)
[»] scaffold0544 (1 HSPs)
scaffold0544 (506-592)||(10653-10739)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1142-1185)||(203410-203453)
[»] scaffold1896 (1 HSPs)
scaffold1896 (724-762)||(437-475)


Alignment Details
Target: chr1 (Bit Score: 548; Significance: 0; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 548; E-Value: 0
Query Start/End: Original strand, 106 - 840
Target Start/End: Complemental strand, 8402773 - 8402035
Alignment:
Q  106 ggaccttggtatttgttggtcatgaacgcttcgcatatatctctatgtattttgttcaagactctcttaatatgaggggtatcttcattcatgaatcaaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8402773 ggaccttggtatttgttggtcatgaacgcttcgcatatatctctatgtattttgttcaagactctcttaatatgaggggtatcttcattcatgaatcaaa 8402674  T
Q  206 caagtttcctctctttataaacaagtggcaatttagcatattttatacaaccaacatttctctgtctctaactacaattttgtgcgtacaaaaggctatt 305  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  8402673 caagtttcctctctttaaaaacaagtggcaatttagcatattttatacaaccaacatttctctgtctctaactacaattttgtgggtacaaaaggttatt 8402574  T
Q  306 g---------tttatggtcaaaataatgtaaatttaatgccttttacatatgaaaatatcctttatgagaaatttatcgtgggcaatttgatatataaaa 396  Q
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8402573 tgatatatcctttatggtcaaaataatgtaaatttaatgccttttacatatgaaaatatcctttatgagaaatttatcgtgggcaatttgatatataaaa 8402474  T
Q  397 ttaaactagtcgaatatttgattttcacttattatgtactttgtctagtgactacgtagttacttgaagtagcttgattgatccttttcttaaagtgaga 496  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||||| |||||||||||||||||||||||||||||    
T  8402473 ttaaactagtcgaatatttgattttcacttattatgtactttgtctagttac----tagttacttgaagtggcttgattgatccttttcttaaagtgaga 8402378  T
Q  497 gaaacattggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttag 596  Q
    ||||||||||||||||||| ||||||||||||||||||||||       | ||||||||||||||||||||||| |||||||||| |||||||||| |||    
T  8402377 gaaacattggcaaaagttatggtggataaggaaatttttatg-------cataaacacttcataaccatcagatctagtgtacacatgtaataatcctag 8402285  T
Q  597 actcctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag------cactctctctctacaattcagatgagtct 690  Q
      | ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||      | |||||||||||||||||||||||||||    
T  8402284 gtttctcaaactaaaccaaatcaaacttcatctgcttcaaacatttctctcactaaaacataaagctctctctctctctctctacaattcagatgagtct 8402185  T
Q  691 tcatcttttccggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacg 790  Q
    |||||||||||||||| |||||||||||| || |||||||||||||||||||| ||| | ||||||||||||||| | ||||||||||||||||||||||    
T  8402184 tcatcttttccggccaaacatgatgattccggcgcggtggccggtggtggcaccaccacaccggagttcaaaacttcatccaaatcaaaaagttttcacg 8402085  T
Q  791 gttttagacatccttttttgtgttgattccaaatattgccttagatttct 840  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8402084 gttttaggcatccttttttgtgttgattccaaatattgccttagatttct 8402035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 906 - 1183
Target Start/End: Complemental strand, 8401971 - 8401693
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8401971 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttcttcgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 8401872  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  8401871 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtggtagacgatgtttatgtga 8401772  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgtta 1183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8401771 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttatgatgtta 8401693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 906 - 1185
Target Start/End: Original strand, 180024 - 180304
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||    
T  180024 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggaatttttgttatgttgaagtgttgttccgatccggttcg 180123  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  180124 aatcttgttgtggtaggctgtacaaactctccctctacctcttctaaaccgattctggatttattgacgaattcgagagtggtagatgatgtttatgtga 180223  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  180224 ttttctgtggtttagtgttcatgaggttcacagtttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 180304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 548 - 840
Target Start/End: Original strand, 179651 - 179947
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctc 647  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||  |  || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  179651 taaacacttcacaaccatcagatctagtgtacacgtgtaataatcccaagcttctcaaactacaccaaatcaaacttcatttgcttaaaacatttctctc 179750  T
Q  648 actaaaacataaagcactc----tctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtggccggtggtggcac 743  Q
    ||||||||||||||| |||    |||||||||||||||||||||||||||||| || ||||||||||||||||||  || ||| ||||||||||||||||    
T  179751 actaaaacataaagctctccctctctctctacaattcagatgagtcttcatctctttcggccacacatgatgatttcggcgcgatggccggtggtggcac 179850  T
Q  744 aaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttagatttct 840  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||    
T  179851 caccgcgccggagttcaaaactccatccaaatcaaaaagttttcacggttttagacatccttttttgtgttgatttcaaatatcgtcttagatttct 179947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 505 - 840
Target Start/End: Original strand, 22348039 - 22348376
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||  | ||||||||||| |||||||| || ||||||||||||||||||||| ||| || ||||    
T  22348039 ggcaaaagttatggtgcataaggaaatccttatgcaccgcgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctaggcttctca 22348138  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttc 700  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | |||||||||||||||||| |||||||||||||| |||    
T  22348139 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaattcatatgagtcttcatctcttc 22348238  T
Q  701 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 800  Q
    |||||||||||||||||||    |||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22348239 cggccacacatgatgattccaccgcggtggccggtggtggcaccactgcgtcggagttcaaaactccgtccaaatcaaaatgttttcacggttttagaca 22348338  T
Q  801 tccttttttgtgttgattccaaatattgccttagatttct 840  Q
    ||   ||||||||  ||||||||||| |||||||||||||    
T  22348339 tc--attttgtgtcaattccaaatatcgccttagatttct 22348376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 929 - 1185
Target Start/End: Original strand, 22348410 - 22348667
Alignment:
Q  929 cgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcgaattttgttgtggtaggctgtac 1027  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||     
T  22348410 cgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttatgttgaagtgttgttccgatccggttcgaatcttgttgtagtaggctgtat 22348509  T
Q  1028 gaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatg 1127  Q
     ||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22348510 aaactctccctctacctcttctaaatcgattctggatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttaatgttcatg 22348609  T
Q  1128 aggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    || ||||||||||||||||||||||| ||||||||||| |||||||| |||| |||||    
T  22348610 agtttcacggtttcagatctgaagttcttactggattcgaaatctttgtgatattaga 22348667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 8e-55
Query Start/End: Original strand, 505 - 679
Target Start/End: Original strand, 18056784 - 18056960
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || ||||    
T  18056784 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 18056883  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcact--ctctctctacaatt 679  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||||||    
T  18056884 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaaactctccctctctctacaatt 18056960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 548 - 662
Target Start/End: Complemental strand, 23320107 - 23319993
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctc 647  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  23320107 taaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaacttcatttgctttaaacatttctctc 23320008  T
Q  648 actaaaacataaagc 662  Q
    |||||||||||||||    
T  23320007 actaaaacataaagc 23319993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 505 - 679
Target Start/End: Original strand, 45889596 - 45889774
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    |||||||| || |||| ||||||||||| ||||  ||||| | |||||| || | ||||||||||| |||| |||| ||||||||||||||| || ||||    
T  45889596 ggcaaaaggtatggtgcataaggaaattcttatccaccgtgcataaacattttacaaccatcagatctagtatacatgtgtaataatcttaggcttctca 45889695  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag----cactctctctctacaatt 679  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    | ||||||||||||||||    
T  45889696 aactacaccaaatcaaatttcatttccttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt 45889774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 548 - 644
Target Start/End: Original strand, 30802439 - 30802535
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgcttcaaacatttct 644  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||    
T  30802439 taaacatttcacaaccatcagatctagtgtacacgtgtaataatcttaggcttctcaaactacaccaaatcaaacttcatttgcttcaaatatttct 30802535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 37639385 - 37639457
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  37639385 taaacacttcacaaccatcagatctagtgtacacgtgtaataattatagacttctcaaactacaccaaatcaa 37639457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 505 - 620
Target Start/End: Original strand, 16115851 - 16115966
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    |||||||||||   || ||||||||||  ||||| ||||| | ||||||||||| |||||||| || || ||||||||||||||||||  ||||| || |    
T  16115851 ggcaaaagttatcatgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctaatgtacacgtgtaataatccaagacttctta 16115950  T
Q  605 aactacaccaaatcaa 620  Q
    ||||||||||||||||    
T  16115951 aactacaccaaatcaa 16115966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 1130 - 1183
Target Start/End: Original strand, 30802828 - 30802881
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgtta 1183  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  30802828 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgtta 30802881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 548 - 620
Target Start/End: Complemental strand, 35198203 - 35198131
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||| ||||||  ||||||||||| |||||||    
T  35198203 taaacacttcacagccatcagatctagtgtacacgtgtaataatcctagacttttcaaactacacaaaatcaa 35198131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 45890152 - 45890207
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  45890152 gttcacgatttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 45890207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1130 - 1182
Target Start/End: Complemental strand, 23319567 - 23319515
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgtt 1182  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  23319567 gttcatggtttcagatctgaagttgttactggattcgaaatctttgtgatgtt 23319515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 18057344 - 18057399
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||| |||||| |  |||||||||    
T  18057344 gttcacggtttcagatctgaagttgttactggattcgaaatctctgcgatgttaga 18057399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 679 - 730
Target Start/End: Complemental strand, 23319941 - 23319890
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtgg 730  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  23319941 tcagatgagtcttcatctcttccggccacacatgatgattccggcgcggtgg 23319890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 724 - 766
Target Start/End: Complemental strand, 13463870 - 13463828
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactc 766  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  13463870 gcggtggccggtggtggcaccaccgcgccggagttcaaaactc 13463828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 679 - 719
Target Start/End: Original strand, 18056991 - 18057031
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattc 719  Q
    ||||||||||||| |||| ||||||||||||||||||||||    
T  18056991 tcagatgagtctttatctcttccggccacacatgatgattc 18057031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Complemental strand, 18597131 - 18597088
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  18597131 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 18597088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Complemental strand, 18750240 - 18750197
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  18750240 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 18750197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 679 - 718
Target Start/End: Original strand, 45889805 - 45889844
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgatt 718  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  45889805 tcagatgagtcttcatctcttccggccacaaatgatgatt 45889844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 237; Significance: 1e-130; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 906 - 1185
Target Start/End: Complemental strand, 15974598 - 15974318
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15974598 ctacctcttgttcttcacggatccatttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatctggttcg 15974499  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15974498 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtggtagatgatgtttatgtga 15974399  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||    
T  15974398 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggatttgaaatctttgtgatgttaga 15974318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-109
Query Start/End: Original strand, 502 - 840
Target Start/End: Complemental strand, 15975004 - 15974663
Alignment:
Q  502 attggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcc 601  Q
    |||||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| |||||||| ||||||||||||| |||||||||||||| ||      
T  15975004 attggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcatatttagtgtacacatgtaataatcttaggctta 15974905  T
Q  602 tcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcact----ctctctctacaattcagatgagtcttcatctt 697  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    |||||| ||||| ||||||||||||||||||     
T  15974904 tcaaagtacaccaaatcaaacttcatctgcttcaaacatttctctcactaaaacataaagctctctccctctctgtacaagtcagatgagtcttcatctc 15974805  T
Q  698 ttccggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttag 797  Q
    |||||  ||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||   || ||||||||||    
T  15974804 ttccgatcacacatgatgattccggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaataaaaaaaaatt-acggttttag 15974706  T
Q  798 acatccttttttgtgttgattccaaatattgccttagatttct 840  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  15974705 acatccttttttgtgttgattccaaatatcgccttagatttct 15974663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 633 - 840
Target Start/End: Original strand, 48305356 - 48305565
Alignment:
Q  633 tcaaacatttctctcactaaaacataaagcactc----tctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggt 728  Q
    |||||||||||||||| ||||||||||||| |||    |||||||||||||||||||||||||||||  |||||||||||||||||||||| ||  |||     
T  48305356 tcaaacatttctctcaataaaacataaagctctccctctctctctacaattcagatgagtcttcatcacttccggccacacatgatgattccggcacggc 48305455  T
Q  729 ggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattg 828  Q
    |||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |    
T  48305456 ggccgtcggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcc--ttttgtgttgattccaaatatcg 48305553  T
Q  829 ccttagatttct 840  Q
     |||||||||||    
T  48305554 tcttagatttct 48305565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 906 - 1052
Target Start/End: Original strand, 48305629 - 48305776
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 1004  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48305629 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctctgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 48305728  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaac 1052  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48305729 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaac 48305776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 6e-65
Query Start/End: Original strand, 633 - 840
Target Start/End: Original strand, 48691112 - 48691323
Alignment:
Q  633 tcaaacatttctctcactaaaacataaagcactc----tctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggt 728  Q
    ||||| |||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  |||     
T  48691112 tcaaaaatttctctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggc 48691211  T
Q  729 ggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattg 828  Q
    |||||  |||||||| ||||| |  || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  48691212 ggccgccggtggcaccaccgcactagatttcaaaactccgttcaaatcaaaaagttttcacggttttagacatccttttttgtgttgatttcaaatatcg 48691311  T
Q  829 ccttagatttct 840  Q
    ||||||||||||    
T  48691312 ccttagatttct 48691323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 534 - 718
Target Start/End: Complemental strand, 46573536 - 46573348
Alignment:
Q  534 ttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgctt 633  Q
    ||||| ||||||  ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  46573536 ttatgcaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgctt 46573437  T
Q  634 caaacatttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttccggccacacatgatgatt 718  Q
    ||||||||||||||||||||||||||||    | |||||| |||||||||||||||||||||||||| ||| || ||||||||||||||    
T  46573436 caaacatttctctcactaaaacataaagctctccctctctatctacaattcagatgagtcttcatctcttcagggcacacatgatgatt 46573348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 906 - 1030
Target Start/End: Original strand, 48691388 - 48691513
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 1004  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48691388 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgattcggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 48691487  T
Q  1005 aattttgttgtggtaggctgtacgaa 1030  Q
    ||| ||||||| ||||||||||||||    
T  48691488 aatcttgttgttgtaggctgtacgaa 48691513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 502 - 662
Target Start/End: Original strand, 30428870 - 30429030
Alignment:
Q  502 attggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcc 601  Q
    |||||||||||||| |||| ||||||||||  ||||| ||||| | |||||| |||| ||||||||||| ||||||||||||||||||||| ||| || |    
T  30428870 attggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttc 30428969  T
Q  602 tcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagc 662  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30428970 tcaaactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagc 30429030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 503 - 661
Target Start/End: Original strand, 46024025 - 46024183
Alignment:
Q  503 ttggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcct 602  Q
    ||||||||||||| |||| | ||| ||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||    
T  46024025 ttggcaaaagttatggtgcacaagaaaatccttatgcaccgtgcataaacacttcacaaccatcagatatagtgtacacgtgtaataatcctagacttct 46024124  T
Q  603 caaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag 661  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  46024125 caaactacattaaatcaaacttcatttgcttcaaatatttctctcactaaaacataaag 46024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 1057 - 1150
Target Start/End: Original strand, 48305867 - 48305960
Alignment:
Q  1057 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 1150  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48305867 ttatggattttttgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 48305960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 633 - 773
Target Start/End: Original strand, 28396842 - 28396986
Alignment:
Q  633 tcaaacatttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggt 728  Q
    |||||||||||||||| ||||||||||||    | |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||  |||     
T  28396842 tcaaacatttctctcaataaaacataaagttctccctctctctctgcaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggc 28396941  T
Q  729 ggccggtggtggcacaaccgcgccggagttcaaaactccgtccaa 773  Q
    |||||  |||||||| |||||||||||||||||||| ||||||||    
T  28396942 ggccgccggtggcaccaccgcgccggagttcaaaaccccgtccaa 28396986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 1060 - 1150
Target Start/End: Original strand, 48691561 - 48691651
Alignment:
Q  1060 tggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 1150  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  48691561 tggatttattgatgaattcgagagtggtagataatgtttatgtgattttctgtggtttagtgttcatgaggctcacgatttcagatctgaa 48691651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 6e-31
Query Start/End: Original strand, 539 - 644
Target Start/End: Original strand, 33797965 - 33798070
Alignment:
Q  539 taccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgcttcaaac 638  Q
    |||||| | |||||| |||| ||||||||||| |||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  33797965 taccgtgcataaacatttcacaaccatcagatctagtatacacgtgtaataatcctagacttctcaaactacatcaaatcaaacttcatttgcttcaaac 33798064  T
Q  639 atttct 644  Q
    ||||||    
T  33798065 atttct 33798070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 534 - 620
Target Start/End: Original strand, 5757416 - 5757502
Alignment:
Q  534 ttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  5757416 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaa 5757502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 46024586 - 46024641
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  46024586 gttcacggttttagatctgaagttgttactggattcaaaatctttgtgatgttaga 46024641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 30430266 - 30430321
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  30430266 gttcacggtttcagagctgaagttgttactggattcgaaatctttgtgatgttaga 30430321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 33798359 - 33798414
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||    
T  33798359 gttcacggtttcagatctgaagttgttactggattcgaaatttttgtgatgttaga 33798414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 46573080 - 46573026
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  46573080 gttcacggtttcagatctgaagttgttact-gattcaaaatctttgtgatgttaga 46573026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 32090621 - 32090693
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    |||||| |||| |||||||| || |||| |||||||||||||||| ||| || ||||||||||||||||||||    
T  32090621 taaacaattcagaaccatcaaatctagtatacacgtgtaataatcataggcttctcaaactacaccaaatcaa 32090693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 12279745 - 12279828
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaat 588  Q
    ||||||||||| |||| |||||||||| |||||| ||||| | |||| |||||| |||||| |||| ||||||| |||||||||    
T  12279745 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaagacttcacaaccattagatctagtgtatacgtgtaat 12279828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 505 - 592
Target Start/End: Original strand, 48690895 - 48690982
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    ||||||||||| |||| |||| |||||  ||||| ||||| | |||||| |||| |||||||| || |||||||||||||||||||||    
T  48690895 ggcaaaagttatggtgcataaagaaatccttatgcaccgtgcataaacagttcacaaccatcaaatctagtgtacacgtgtaataatc 48690982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 548 - 592
Target Start/End: Complemental strand, 44141273 - 44141229
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||    
T  44141273 taaacacttcacaaccatctgatttagtgtacacgtgtaataatc 44141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 505 - 592
Target Start/End: Original strand, 28396722 - 28396809
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    ||||||||||||| || ||||||||||  ||||| ||||| | |||||| |||| || |||||||| ||||||||| | |||||||||    
T  28396722 ggcaaaagttacgatgcataaggaaatccttatgcaccgtgcataaacatttcacaatcatcagatctagtgtacaagagtaataatc 28396809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 551 - 592
Target Start/End: Original strand, 48691038 - 48691079
Alignment:
Q  551 acacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  48691038 acacttcacaaccatcagatctagtgtacacgtgtaataatc 48691079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 559892 - 559935
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  559892 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 559935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 569801 - 569844
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  569801 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 569844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Complemental strand, 4185218 - 4185175
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  4185218 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 4185175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 766
Target Start/End: Original strand, 5200608 - 5200651
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 766  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  5200608 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 5200651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 766
Target Start/End: Original strand, 5209737 - 5209780
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 766  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  5209737 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 5209780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 17515799 - 17515842
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  17515799 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 17515842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Complemental strand, 17537415 - 17537372
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  17537415 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 17537372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 766
Target Start/End: Original strand, 27967395 - 27967438
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 766  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  27967395 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 27967438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 766
Target Start/End: Original strand, 27976848 - 27976891
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 766  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  27976848 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 27976891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 679 - 730
Target Start/End: Original strand, 46024236 - 46024287
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtgg 730  Q
    |||||| ||||||||||| ||||| |||||||||||||||| || |||||||    
T  46024236 tcagattagtcttcatctcttccgaccacacatgatgattccggcgcggtgg 46024287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 758
Target Start/End: Complemental strand, 38411820 - 38411786
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagtt 758  Q
    |||||||||||||||||||| ||||||||||||||    
T  38411820 gcggtggccggtggtggcaccaccgcgccggagtt 38411786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 223; Significance: 1e-122; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 509 - 840
Target Start/End: Complemental strand, 4836762 - 4836427
Alignment:
Q  509 aaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaact 608  Q
    ||||||| |||| |||| |||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||  ||  |||||||    
T  4836762 aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaact 4836663  T
Q  609 acaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactc----tctctctacaattcagatgagtcttcatcttttccggc 704  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    |||||||||||||||||||||||||||||| |||||||    
T  4836662 acaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggc 4836563  T
Q  705 cacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcct 804  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4836562 cacacatgatgattccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcct 4836463  T
Q  805 tttttgtgttgattccaaatattgccttagatttct 840  Q
    |||||| |||||||||||||||||||||| ||||||    
T  4836462 tttttgcgttgattccaaatattgccttaaatttct 4836427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 509 - 840
Target Start/End: Complemental strand, 4842207 - 4841872
Alignment:
Q  509 aaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaact 608  Q
    ||||||| |||| |||| |||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||  ||  |||||||    
T  4842207 aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaact 4842108  T
Q  609 acaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactc----tctctctacaattcagatgagtcttcatcttttccggc 704  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    |||||||||||||||||||||||||||||| |||||||    
T  4842107 acaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggc 4842008  T
Q  705 cacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcct 804  Q
    ||||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4842007 cacacatgatgattccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcct 4841908  T
Q  805 tttttgtgttgattccaaatattgccttagatttct 840  Q
    |||||| |||||||||||||||||||||| ||||||    
T  4841907 tttttgcgttgattccaaatattgccttaaatttct 4841872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 921 - 1185
Target Start/End: Complemental strand, 39658245 - 39657981
Alignment:
Q  921 cacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcgaattttgttgtggta 1019  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  39658245 cacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcgaatcttgttgtggta 39658146  T
Q  1020 ggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttag 1119  Q
    |||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39658145 ggctgtacaaactctccctctacctcttctaaa-cgattatgaatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttag 39658047  T
Q  1120 tgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  39658046 tgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 39657981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 906 - 1185
Target Start/End: Original strand, 7058510 - 7058790
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatcgg-ttcg 1004  Q
    ||||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | || |    
T  7058510 ctacctcttgttcttcacgaattcgtttcgtgttttggttttcttctccgatccggttcggatttgttgttgtgttgaaatgttgttccgatccgatttg 7058609  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  7058610 aatcttgttgtggtatgctgtacgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtggtagatgatgtttatgtga 7058709  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  7058710 ttttatgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 7058790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 906 - 1185
Target Start/End: Original strand, 2750427 - 2750707
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    ||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2750427 ctacctcctgttcttcacagatccgtttcacattttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 2750526  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| ||||||||||||| |||| ||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||| ||||||||||||||||||    
T  2750527 aatcttgttgtggtaggttgtatgaactctccctctacctcttctaaaccgattctggatttattgatgaattcgagagtgatagatgatgtttatgtga 2750626  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||    
T  2750627 ttttatgtggtttagtgtttatgatgttcacggtttcagatctgaagtttttacttgattcgaaatctttgtgatgttaga 2750707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 906 - 1185
Target Start/End: Complemental strand, 4836359 - 4836079
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4836359 ctacctcttgttcttcacggattcgtttcgtgttttggtcttcttctccgatctggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 4836260  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| ||||||||||||||||||||||||||||   ||||||||||||  ||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  4836259 aatcttgttgtggtaggctgtacgaactctccgcgtacctcttctaaaccgattctggatttattgacgaattcgagagtggtagatgatgtttatgtga 4836160  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| |||| |||||    
T  4836159 ttttatgtggtttagtgttcatgaggatcacagtttcaaatctgaagttgttactggattcgaaatctttgtgatattaga 4836079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 906 - 1185
Target Start/End: Complemental strand, 4841804 - 4841524
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  4841804 ctacctcttgttcttcacggattcgtttcgtgttttggtcttcttctccgatctggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 4841705  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| ||||||||||||||||||||||||||||   ||||||||||||  ||||| |||||||||||| ||||| ||||||||||||||||||||||||||    
T  4841704 aatcttgttgtggtaggctgtacgaactctccgcgtacctcttctaaaccgattctggatttattgacgaattcgagagtggtagatgatgtttatgtga 4841605  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||| ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| |||| |||||    
T  4841604 ttttatgtggtttagtgttcatgaggatcacagtttcaaatctgaagttgttactggattcgaaatctttgtgatattaga 4841524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 176; E-Value: 3e-94
Query Start/End: Original strand, 505 - 840
Target Start/End: Original strand, 7058114 - 7058442
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||| ||| ||||||||||||||||||||| |||||| ||||    
T  7058114 ggcaaaagttatggtgcataaggaaatacttatgcaccgtgcataaacacttcacaaccatccgatctagtgtacacgtgtaataatcctagacttctca 7058213  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttc 700  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    | ||||||||||||||||||||||||||||||||| ||     
T  7058214 aactacaccaaatcaaacttcatttgcttcaaacacttctctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttt 7058313  T
Q  701 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 800  Q
    |||||||||||||||||||||| ||           ||||||  ||||||||||||||||||||||||||||||| |||||    ||||| |||||||||    
T  7058314 cggccacacatgatgattctggcgc----------agtggcatcaccgcgccggagttcaaaactccgtccaaat-aaaaaaaaatcacgattttagaca 7058402  T
Q  801 tccttttttgtgttgattccaaatattgccttagatttct 840  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  7058403 tccttttttgtgttgattccaaatatcgccttagatttct 7058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 172; E-Value: 8e-92
Query Start/End: Original strand, 581 - 840
Target Start/End: Original strand, 2750101 - 2750364
Alignment:
Q  581 cgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactc------tctctcta 674  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || |||      ||||||||    
T  2750101 cgtgtaataatcatagacttctcaaactacaccaaatcaaacttcatttactttaaacatttctctcactaaaacataatgctctccctcactctctcta 2750200  T
Q  675 caattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaa 774  Q
    |||||||||||||||||||||| |||||||||||| |  ||||||  | ||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  2750201 caattcagatgagtcttcatctcttccggccacacgt--tgattccagcgcggtggccggtggtggaaccaccgcgccggagttcaaaactccgtccaaa 2750298  T
Q  775 tcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttagatttct 840  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2750299 tcaaaaagttttcatggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 2750364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 534 - 840
Target Start/End: Original strand, 8550533 - 8550837
Alignment:
Q  534 ttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgctt 633  Q
    ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||  || |||||| ||||||||||||||||||||||||||    
T  8550533 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataagcttctcaaattacaccaaatcaaacttcatttgctt 8550632  T
Q  634 caaacatttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtg 729  Q
    ||||||||||||||||||||||||||||    | |||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |         
T  8550633 caaacatttctctcactaaaacataaagttctccctctttctctacaattcagatgagtcttcatctcttacggccacacatgatgattctggcg----- 8550727  T
Q  730 gccggtggtggcacaaccgcgccggagttcaaaactccgtccaaat-caaaaagttttcacggttttagacatccttttttgtgttgattccaaatattg 828  Q
      ||||||||| || |||||||||||||||||||||||||||||||  |||||   |||||||||||||||||| |||||||||||||||||||||||      
T  8550728 --cggtggtggtaccaccgcgccggagttcaaaactccgtccaaataaaaaaaaaattcacggttttagacatctttttttgtgttgattccaaatatca 8550825  T
Q  829 ccttagatttct 840  Q
    ||||||||||||    
T  8550826 ccttagatttct 8550837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 132; E-Value: 6e-68
Query Start/End: Original strand, 648 - 840
Target Start/End: Complemental strand, 39658463 - 39658269
Alignment:
Q  648 actaaaacataaagcactc--tctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtggccggtggtggcacaa 745  Q
    ||||||||||||||| |||  ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||  ||| |||||  |||| ||| |    
T  39658463 actaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtgtcacca 39658364  T
Q  746 ccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttagatttct 840  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39658363 ccgcgccggagttcaaaactccgtccgaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 39658269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 906 - 1064
Target Start/End: Original strand, 8550903 - 8551062
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 1004  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  8550903 ctacctcttgttcttcacggatctgtttcgcgttttggtcttcttctccgatccggttcagatttgttgttgtgttgaagtgttgttccgatccggttcg 8551002  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 1064  Q
    ||| ||||||||||||| ||||||||||||||||||||||||| |||  ||||| |||||    
T  8551003 aatcttgttgtggtaggttgtacgaactctccctctacctcttataaaccgattctggat 8551062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 633 - 840
Target Start/End: Original strand, 1208829 - 1209039
Alignment:
Q  633 tcaaacatttctctcactaaaacataaagcactc--tctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtgg 730  Q
    |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| || |||||||||||||||||||  |  ||| ||    
T  1208829 tcaaacatttctctcactaaaacataaagctctccctctctctacaattcagatgagtcttcatctcttgcggccacacatgatgattccagcacggcgg 1208928  T
Q  731 ccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagtt-ttcacggttttagacatccttttttgtgttgattccaaatattgc 829  Q
    |||  |||||||| || || | ||||||||||||||||||||||| |||||    |||| ||||||||||||||||||||||||||||||||||||| ||    
T  1208929 ccgccggtggcaccactgctctggagttcaaaactccgtccaaataaaaaaaaaattcatggttttagacatccttttttgtgttgattccaaatatcgc 1209028  T
Q  830 cttagatttct 840  Q
    |||||||||||    
T  1209029 cttagatttct 1209039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 503 - 679
Target Start/End: Complemental strand, 32987512 - 32987334
Alignment:
Q  503 ttggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcct 602  Q
    ||||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || ||    
T  32987512 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttct 32987413  T
Q  603 caaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcact--ctctctctacaatt 679  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||  ||||||||||||||    
T  32987412 caaactacaccaaatcaaacttcatttgcttcaaacatttctctaactaaaacataaagctctccctctctctacaatt 32987334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 505 - 673
Target Start/End: Original strand, 39021975 - 39022143
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| || |||||||| ||||||||| ||||||||||| ||| || ||||    
T  39021975 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaatcatcagatctagtgtacatgtgtaataatcctaggcttctca 39022074  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactctctctct 673  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  39022075 aactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagctctccctctct 39022143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 906 - 1051
Target Start/End: Original strand, 1209110 - 1209259
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggat---ttgttgttgtgttgaagtgttgttccgat-cggt 1001  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||   |||||||||||||||| |||||||||||| ||||    
T  1209110 ctacctcttgttcttcatggatccgtttcgcgttttggtcttcttctctgatccagttcggatttgttgttgttgtgttgaaatgttgttccgatccggt 1209209  T
Q  1002 tcgaattttgttgtggtaggctgtacgaactctccctctacctcttctaa 1051  Q
    |||||| |||||||||||| ||||||||||||||| | ||||||||||||    
T  1209210 tcgaatcttgttgtggtagtctgtacgaactctccttgtacctcttctaa 1209259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 505 - 673
Target Start/End: Complemental strand, 15260917 - 15260748
Alignment:
Q  505 ggcaaaagttacggtggataaggaaattt-ttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctc 603  Q
    ||||||||||| |||| |||||||  ||  ||||| ||||| | ||||||||||| |||||||| || |||||||||||| ||||||||  || || |||    
T  15260917 ggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtttaataatccaaggcttctc 15260818  T
Q  604 aaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactctctctct 673  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| | ||| ||||||    
T  15260817 aaactacaccaaatcaaacttcatttgcttcaaatatttctctcactaaaatataaaactctccctctct 15260748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1057 - 1150
Target Start/End: Original strand, 1209352 - 1209445
Alignment:
Q  1057 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaa 1150  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  1209352 ttatggattttttgatgaattcgagagtggtagatgatgtttatgtgattttctatggtttagtgttcatgaggttcacagttttagatctgaa 1209445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 548 - 644
Target Start/End: Original strand, 7614111 - 7614207
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgcttcaaacatttct 644  Q
    ||||||||||| ||||||||||| || |||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  7614111 taaacacttcacaaccatcagatctaatgtacacgtgtaataatcataggcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttct 7614207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 15181834 - 15181906
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||||  | ||||||||||||||||||||    
T  15181834 taaacacttcacaagcatcagatctagtgtacacgtgtaataatcttaggtttctcaaactacaccaaatcaa 15181906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 504 - 592
Target Start/End: Original strand, 1208708 - 1208796
Alignment:
Q  504 tggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    |||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||| | |||||| |||| |||||||||||||||||||||    
T  1208708 tggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacactttacaaccataagatctagtgtacacgtgtaataatc 1208796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 39022525 - 39022580
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  39022525 gttcacggtttcagatatgaagttgttactggattcgaaatctttgtgatgttaga 39022580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 724 - 768
Target Start/End: Original strand, 4838725 - 4838769
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccg 768  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  4838725 gcggtggccggtggtggcaccaccgcgccggagttcaaaactccg 4838769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1130 - 1174
Target Start/End: Complemental strand, 32986968 - 32986924
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatcttt 1174  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  32986968 gttcacggtttcagatctgaagttgttactggattcgaaatcttt 32986924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 724 - 766
Target Start/End: Original strand, 36577978 - 36578020
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactc 766  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  36577978 gcggtggccggtggtggcaccaccgcgccggagttcaaaactc 36578020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 7614500 - 7614555
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||| | ||||||||    
T  7614500 gttcacggtttcagatctgaagttgttattggattcgaaatttttgtaatgttaga 7614555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 762
Target Start/End: Original strand, 26872669 - 26872707
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaa 762  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26872669 gcggtggccggtggtggcaccaccgcgccggagttcaaa 26872707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 762
Target Start/End: Original strand, 26875127 - 26875165
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaa 762  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26875127 gcggtggccggtggtggcaccaccgcgccggagttcaaa 26875165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 681 - 719
Target Start/End: Original strand, 39022186 - 39022224
Alignment:
Q  681 agatgagtcttcatcttttccggccacacatgatgattc 719  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  39022186 agatgagtcttcatctcttccggccacacatgatgattc 39022224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 679 - 720
Target Start/End: Complemental strand, 15260707 - 15260666
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattct 720  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  15260707 tcagatgagtcttcatctcttccggccacatatgatgattct 15260666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1130 - 1182
Target Start/End: Complemental strand, 15260367 - 15260315
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgtt 1182  Q
    ||||||||||||| ||||||||||||||||  |||| |||||||| |||||||    
T  15260367 gttcacggtttcatatctgaagttgttactatattcgaaatctttgtgatgtt 15260315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Complemental strand, 23091596 - 23091553
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  23091596 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 23091553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 505 - 572
Target Start/End: Original strand, 42433701 - 42433768
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagattt 572  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||| ||||||| |||||||||||||    
T  42433701 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagattt 42433768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 223; Significance: 1e-122; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 906 - 1183
Target Start/End: Original strand, 50754410 - 50754688
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  50754410 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatctggttca 50754509  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||  ||||| | |||||||||||||||| ||||||| |||| |||||||||||||    
T  50754510 aatcttgttgtggtaggctgtacaaactctccctctacctcttctaaaccgattctagatttattgatgaattcgagagtgatagaggatgtttatgtga 50754609  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgtta 1183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  50754610 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgtta 50754688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 222; E-Value: 1e-121
Query Start/End: Original strand, 522 - 840
Target Start/End: Complemental strand, 52987698 - 52987376
Alignment:
Q  522 ataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaa 621  Q
    ||||||||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  52987698 ataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaa 52987599  T
Q  622 cttcatttgcttcaaacatttctctcactaaaacataaagcactc----tctctctacaattcagatgagtcttcatcttttccggccacacatgatgat 717  Q
    |||||||||||||||| |||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||| || |||||||||||||||||    
T  52987598 cttcatttgcttcaaatatttctctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctctttcggccacacatgatgat 52987499  T
Q  718 tctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgat 817  Q
    || || ||||||| |||||||||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52987498 tccggcgcggtggtcggtggtggcaccaccgcgccggagttcaaaactgcatccaaatcaaaaagtttttacggttttagacatccttttttgtgttgat 52987399  T
Q  818 tccaaatattgccttagatttct 840  Q
    |||||||||||||||||||||||    
T  52987398 tccaaatattgccttagatttct 52987376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 507 - 840
Target Start/End: Original strand, 50754008 - 50754343
Alignment:
Q  507 caaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaa 606  Q
    ||||||||| |||  ||||||||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || ||||||    
T  50754008 caaaagttatggtacataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaa 50754107  T
Q  607 ctacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactc--tctctctacaattcagatgagtcttcatcttttccggc 704  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||  ||||||||||||||||||||||||| |||| ||||| |    
T  50754108 ctacaccaaatcaaacttcatttgattcaaacacttctctcactaaaacataaagctctccctctctctacaattcagatgagtcttaatctcttccgac 50754207  T
Q  705 cacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcct 804  Q
    ||||||||||||||| || || ||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50754208 cacacatgatgattccggcgcagtggccggtggtgacaccaccgcaccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcct 50754307  T
Q  805 tttttgtgttgattccaaatattgccttagatttct 840  Q
    |||||||||||||||||||||| |||||||||||||    
T  50754308 tttttgtgttgattccaaatatcgccttagatttct 50754343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 906 - 1185
Target Start/End: Complemental strand, 52987310 - 52987039
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  52987310 ctacctcttgttcttcacggatctgtttcgcgttttggtcttcttctcggatccggttcggatttgttgttgtgttcaagtgttgttccgatccggttcg 52987211  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||||||  | ||||||||||||||||||||||||||||||||    
T  52987210 aatcttgttgtggtaggttgtacgaactctccctctacctcttctaaaccgattctggatttataaacgaatttgagagtggtagatgatgtttatgtga 52987111  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||         ||||||||||||||||||||||||||| ||||||| ||||||||  |||||||||    
T  52987110 ttttctgtggtttagtg---------ttcacggtttcagatctgaagttgttattggattcgaaatctttgcgatgttaga 52987039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 3e-79
Query Start/End: Original strand, 505 - 730
Target Start/End: Complemental strand, 51362503 - 51362275
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||| || ||||    
T  51362503 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataatcctaggcttctca 51362404  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaa---gcactctctctctacaattcagatgagtcttcatcttttcc 701  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||||||||||||| ||||    
T  51362403 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaactttccctctctctctacaattcagatgagtcttcatctcttcc 51362304  T
Q  702 ggccacacatgatgattctggtgcggtgg 730  Q
    ||||||||||||||||||||  |||||||    
T  51362303 ggccacacatgatgattctgacgcggtgg 51362275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 906 - 1185
Target Start/End: Original strand, 31852514 - 31852799
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||| |||||     
T  31852514 ctacctcttgttcttcacagatccgtttcgcgttttggtcttcttctccgatccggttcagatttgt-gttgtgttgaagtgttgtttcgatccggttca 31852612  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggattt------------attgatgaatttgagagtggtagatg 1092  Q
    ||| ||||||| ||     ||  ||||||||||||||||||||||||  ||||| ||||| |            ||||||||||| ||||| ||||||||    
T  31852613 aatcttgttgttgt-----gtt-gaactctccctctacctcttctaaaccgattctggatattcttctggatctattgatgaattcgagaggggtagatg 31852706  T
Q  1093 atgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| ||||||||||    
T  31852707 atgtttatgtgattttctgtggtttagtgttcatgaggttcacggttttagatctgaagttgttattggaatcaaaatctttgtgatgttaga 31852799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 505 - 719
Target Start/End: Complemental strand, 19385380 - 19385166
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||||  ||| || ||||    
T  19385380 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataattctaggcttctca 19385281  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactctctctctacaattcagatgagtcttcatcttttccggc 704  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||||||    
T  19385280 aactacatcaaatcaaacttcatttgcttcaatcatttccctcactaaaacataaaactctccctctctacaattcagatgagtcttcatctcttccggc 19385181  T
Q  705 cacacatgatgattc 719  Q
    |||| ||||||||||    
T  19385180 cacagatgatgattc 19385166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 641 - 840
Target Start/End: Original strand, 31852242 - 31852445
Alignment:
Q  641 ttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtggccggtg 736  Q
    |||||||||||||||||||||    | ||||||||||||| ||||||||||||||||||| ||| || ||||||||| ||||  || |||||||||||||    
T  31852242 ttctctcactaaaacataaagttctccctctctctctacagttcagatgagtcttcatctcttcagggcacacatgacgatttcggcgcggtggccggtg 31852341  T
Q  737 gtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttagat 836  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  31852342 gtggcaccactgcgctggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgtcttagat 31852441  T
Q  837 ttct 840  Q
    ||||    
T  31852442 ttct 31852445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 505 - 719
Target Start/End: Complemental strand, 7045365 - 7045148
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||| ||||| |||||   ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || ||||    
T  7045365 ggcaaaagttatggtgcataaggaaattcttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcgtaggcttctca 7045266  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttc 700  Q
     |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||||||||||||| |||    
T  7045265 gactacatcaaatcaaactt-atttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttc 7045167  T
Q  701 cggccacacatgatgattc 719  Q
    | |||||||||||||||||    
T  7045166 cagccacacatgatgattc 7045148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 505 - 662
Target Start/End: Original strand, 8718101 - 8718258
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||||| |||| |||||| ||||||||||| ||||||||| ||||||||||| ||| || || |    
T  8718101 ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctta 8718200  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagc 662  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  8718201 aactacaccaaatcaaacttcatttgtttaaaacatttctctcactaaaacataaagc 8718258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 505 - 662
Target Start/End: Original strand, 9069988 - 9070145
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||||| |||| |||||| ||||||||||| ||||||||| ||||||||||| ||| || || |    
T  9069988 ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctta 9070087  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagc 662  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  9070088 aactacaccaaatcaaacttcatttgtttaaaacatttctctcactaaaacataaagc 9070145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 534 - 673
Target Start/End: Original strand, 39099226 - 39099365
Alignment:
Q  534 ttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgctt 633  Q
    ||||| ||||| | |||| | |||| ||||||||||| ||||||||||||||||||||| ||| || |||||||||||| ||||||||||||||||| ||    
T  39099226 ttatgcaccgtgcataaatatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacactaaatcaaacttcatttgttt 39099325  T
Q  634 caaacatttctctcactaaaacataaagcactctctctct 673  Q
     |||||||||||||||||||||||||||| ||| ||||||    
T  39099326 aaaacatttctctcactaaaacataaagctctccctctct 39099365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 509 - 642
Target Start/End: Complemental strand, 16277475 - 16277342
Alignment:
Q  509 aaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaact 608  Q
    ||||||| |||| |||||||||| |||||| ||||| | ||||||||||| |||||||| || ||||||||||||||||||||| ||  || ||||||||    
T  16277475 aaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctacgcttctcaaact 16277376  T
Q  609 acaccaaatcaaacttcatttgcttcaaacattt 642  Q
    |||||||||||||||||||||| |||||||||||    
T  16277375 acaccaaatcaaacttcatttgtttcaaacattt 16277342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 7044878 - 7044823
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  7044878 gttcacggtttcagatctgaagttgttactggattcgaaatctttgttatgttaga 7044823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 8718662 - 8718717
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  8718662 gttcacggtttcagatctgaagttgttattggattcaaaaactttgtgatgttaga 8718717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 9070549 - 9070604
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||    
T  9070549 gttcacggtttcagatctgaagttgttattggattcaaaaactttgtgatgttaga 9070604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 16277055 - 16277000
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  16277055 gttcacggttttagatctgaagttgttactggattcgaaatctttgtgatgttaga 16277000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 51362022 - 51361967
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  51362022 gttcacggtttcagatatgaagttgttactggattcgaaatctttgtgatgttaga 51361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 679 - 730
Target Start/End: Original strand, 8718318 - 8718369
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtgg 730  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  8718318 tcagatgagtcttcatctcttccggccacacatgatgattccggcgcggtgg 8718369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 679 - 730
Target Start/End: Original strand, 9070205 - 9070256
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtgg 730  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  9070205 tcagatgagtcttcatctcttccggccacacatgatgattccggcgcggtgg 9070256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 19384905 - 19384850
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  19384905 gttcacagtttaagatctgaagttgttactagattcaaaatctttgtgatgttaga 19384850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 23699371 - 23699443
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| |||||||| || || |||||||||||||||||| ||| ||  |||||||||| ||||||||    
T  23699371 taaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23699443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 23717826 - 23717898
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| |||||||| || || |||||||||||||||||| ||| ||  |||||||||| ||||||||    
T  23717826 taaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23717898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 23736282 - 23736354
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| |||||||| || || |||||||||||||||||| ||| ||  |||||||||| ||||||||    
T  23736282 taaacacttcacaaccatcatatctaatgtacacgtgtaataatcctaggcttttcaaactacatcaaatcaa 23736354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 548 - 591
Target Start/End: Complemental strand, 17627253 - 17627210
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataat 591  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  17627253 taaacacttcacaaccatcagatctagtgtacacgtgtaataat 17627210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 809
Target Start/End: Original strand, 13603391 - 13603476
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcctttttt 809  Q
    |||||||||| ||||||||| |||||||||||| ||  |||||||| |||||||||||| | || ||| ||||| ||||||||||||    
T  13603391 gcggtggccgatggtggcaccaccgcgccggagttttcaaactccg-ccaaatcaaaaattatttacgtttttaaacatcctttttt 13603476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 766
Target Start/End: Original strand, 1005756 - 1005799
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 766  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  1005756 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 1005799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 721 - 808
Target Start/End: Original strand, 2216567 - 2216653
Alignment:
Q  721 ggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 808  Q
    ||||||||||||||||||||| | ||||||||||||||  ||||||| ||| | ||||||| |||| |   ||||| |||||||||||    
T  2216567 ggtgcggtggccggtggtggcgccaccgcgccggagtttcaaactcc-tccgattcaaaaactttttatatttttaaacatccttttt 2216653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Complemental strand, 4444389 - 4444346
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  4444389 gcggtggccggcggtggcaccaccacgccggagttcaaaactcc 4444346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 724 - 808
Target Start/End: Original strand, 11262296 - 11262380
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgcc-ggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 808  Q
    |||||||||||||||||| | |||||||| ||||||  ||||||| ||| | ||||||| |||| ||| ||||| |||||||||||    
T  11262296 gcggtggccggtggtggcgccaccgcgccgggagttttaaactcc-tccgattcaaaaactttttacgtttttaaacatccttttt 11262380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 217; Significance: 1e-118; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-118
Query Start/End: Original strand, 906 - 1185
Target Start/End: Complemental strand, 2826719 - 2826439
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    ||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2826719 ctacctcttgttcttcacggacccatttcacgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 2826620  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| |||| |||||||| |||||||||||||||||||||||||||||   ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  2826619 aatcttgtcgtggtaggttgtacgaactctccctctacctcttctaaactgattatggatttattgacgaattcgagagtggtagatgatgtttatgtga 2826520  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  2826519 ttttctatggtttagtgttcatgaggttcacggttttagatctgaagttgttactggattcaaaatctttgtgatgttaga 2826439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 8e-95
Query Start/End: Original strand, 548 - 840
Target Start/End: Complemental strand, 2827089 - 2826792
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctc 647  Q
    ||||||||| | ||||||||||| ||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||||||||||||||| ||||    
T  2827089 taaacactttacaaccatcagatctagtgtacacgtgtaattatcttaggcttctcaaactacaccaaatcaaatttcatttgcttcaaacatttatctc 2826990  T
Q  648 actaaaacataaagcact--ctctctctacaattcagatgagtcttcatcttttc---cggccacacatgatgattctggtgcggtggccggtggtggca 742  Q
    ||||||||||||||| ||  |||||||||||||||| |||||||||||||| |||   |||||| |||||||||||| |  || ||||||||||||||||    
T  2826989 actaaaacataaagctctccctctctctacaattcaaatgagtcttcatctcttccggcggccatacatgatgattccgacgcagtggccggtggtggca 2826890  T
Q  743 caaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttagatttct 840  Q
    | |||||||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  2826889 ccaccgcgccggagttcaaaactccgtccaaatcaaaaaaaaattacggttttagacatccttttttgtgttgatttcaaatatcgccttagatttct 2826792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 633 - 840
Target Start/End: Original strand, 34329247 - 34329454
Alignment:
Q  633 tcaaacatttctctcactaaaacataaagcactctctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtggcc 732  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||  ||  ||| ||||    
T  34329247 tcaaacatttctctcactaaaacataaagctctctctctctacaattcagatgggtcttcatctcttccggccacacatgatgatttcggcacggcggcc 34329346  T
Q  733 ggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgcctt 832  Q
    |  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||    
T  34329347 gccggtggtaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggtttcaaacatccttttttgtgttgattccaaatatcgtctt 34329446  T
Q  833 agatttct 840  Q
    ||||||||    
T  34329447 agatttct 34329454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 1e-72
Query Start/End: Original strand, 505 - 719
Target Start/End: Complemental strand, 28070218 - 28070010
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||| ||||||| ||||||||||||||||||||| |||||| ||||    
T  28070218 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatctagtgtacacgtgtaataatcctagacttctca 28070119  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactctctctctacaattcagatgagtcttcatcttttccggc 704  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||| |||||||    
T  28070118 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag------ctctctacaattcagatgagtcttcatctcttccggc 28070025  T
Q  705 cacacatgatgattc 719  Q
    |||||||||||||||    
T  28070024 cacacatgatgattc 28070010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 906 - 1033
Target Start/End: Original strand, 34329520 - 34329648
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34329520 ctacatcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatctggttcg 34329619  T
Q  1005 aattttgttgtggtaggctgtacgaactc 1033  Q
    ||| ||||||||||||| |||||||||||    
T  34329620 aatcttgttgtggtaggttgtacgaactc 34329648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 507 - 662
Target Start/End: Original strand, 13362772 - 13362927
Alignment:
Q  507 caaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaa 606  Q
    ||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||| ||||||||||||| ||| || ||||||    
T  13362772 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtatacgtgtaataatcataggcttctcaaa 13362871  T
Q  607 ctacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagc 662  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13362872 ctacaccaaatcaaaattcatttgcttcaaacatttctctcactaaaacataaagc 13362927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 504 - 673
Target Start/End: Complemental strand, 23335773 - 23335603
Alignment:
Q  504 tggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctc 603  Q
    |||||||||||| |||| ||||||||||   |||| ||||| | |||||| |||| ||||||||||| ||||||||||||||||||||| ||| || |||    
T  23335773 tggcaaaagttatggtgcataaggaaatccgtatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctc 23335674  T
Q  604 aaactacaccaaatcaaacttcatttgcttcaaacatttctctcact-aaaacataaagcactctctctct 673  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| ||| ||||||    
T  23335673 aaactacaccaaatcaaagttcatttgcatcaaacatttctctcactaaaaacataaagctctccctctct 23335603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 1e-38
Query Start/End: Original strand, 1057 - 1147
Target Start/End: Original strand, 34329690 - 34329780
Alignment:
Q  1057 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 1147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  34329690 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcattcggttcacggtttcagatct 34329780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 548 - 620
Target Start/End: Complemental strand, 18465578 - 18465506
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18465578 taaacacttcacaaccatcagatctagtgtacacgtgtaataatcttagacttctcaaactacaccaaatcaa 18465506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 507 - 679
Target Start/End: Complemental strand, 25017280 - 25017121
Alignment:
Q  507 caaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaa 606  Q
    ||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||||||| |||||||||||||||||||| ||||  | ||||||    
T  25017280 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattttaggtttctcaaa 25017181  T
Q  607 ctacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcact--ctctctctacaatt 679  Q
    ||               ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  25017180 ct---------------tcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctacaatt 25017121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 548 - 621
Target Start/End: Complemental strand, 16668816 - 16668743
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaa 621  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  16668816 taaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaa 16668743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 604 - 673
Target Start/End: Original strand, 42512273 - 42512342
Alignment:
Q  604 aaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactctctctct 673  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||    
T  42512273 aaactacaccaaatcaaacttcatttacttcaaacatttctctcactaaaacctaaagctctccctctct 42512342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 505 - 592
Target Start/End: Original strand, 34329127 - 34329214
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    ||||||||||| |||| |||||||||| |||||| ||||| | ||||||||||| ||||||||||| |||||||||||  ||||||||    
T  34329127 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgaataataatc 34329214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 13363330 - 13363385
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  13363330 gttcacggtttcagatctgaagttgttattggattcgaaatctttgtgatgttaga 13363385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 23335216 - 23335161
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  23335216 gttcacggtttcagatctgaagttgaaactggattcaaaatctttgtgatgttaga 23335161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 42512544 - 42512599
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  42512544 gttcacggtttcatatctgaagttgttactggattcgaaatctttgtgatgttaga 42512599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 1131 - 1185
Target Start/End: Complemental strand, 25016745 - 25016691
Alignment:
Q  1131 ttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  25016745 ttcacagtttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 25016691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 1131 - 1185
Target Start/End: Complemental strand, 28069754 - 28069700
Alignment:
Q  1131 ttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  28069754 ttcacggtttcagatctgaagttgttactggattcgaaatcttttttatgttaga 28069700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 8948933 - 8949003
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| ||| |||||||||||||||||||||  |||||| ||| || ||||||||||||||||||||    
T  8948933 taaacacttcaaaactatcagatttagtgtacacgtg--ataatcctaggcttctcaaactacaccaaatcaa 8949003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 679 - 730
Target Start/End: Complemental strand, 23335560 - 23335509
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtgg 730  Q
    |||||||||||||||||| |||| ||||||||||||||||| || |||||||    
T  23335560 tcagatgagtcttcatctcttccagccacacatgatgattccggcgcggtgg 23335509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 766
Target Start/End: Complemental strand, 23568507 - 23568465
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactc 766  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  23568507 gcggtggccggtggtggcatcaccgcgccggagttcaaaactc 23568465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 679 - 721
Target Start/End: Complemental strand, 25017090 - 25017048
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctg 721  Q
    |||||||||||||||||| ||||||| ||||||||||||||||    
T  25017090 tcagatgagtcttcatctcttccggcaacacatgatgattctg 25017048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 724 - 764
Target Start/End: Complemental strand, 29189288 - 29189248
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaac 764  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  29189288 gcggtggccggtggtggcaccaccgcgcctgagttcaaaac 29189248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 31549542 - 31549585
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  31549542 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 31549585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Complemental strand, 31411848 - 31411810
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaa 762  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  31411848 gcggtggccggtggtggcaccaccgcaccggagttcaaa 31411810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Complemental strand, 31422756 - 31422718
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaa 762  Q
    |||||||||||||||||||| || |||||||||||||||    
T  31422756 gcggtggccggtggtggcaccactgcgccggagttcaaa 31422718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 215; Significance: 1e-117; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 533 - 840
Target Start/End: Original strand, 637882 - 638190
Alignment:
Q  533 tttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgct 632  Q
    |||||| ||||| | ||||||||||| ||||||||||| ||||||||| |||||||||| |||| || ||||||||||||||||||||||||||||||||    
T  637882 tttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataattttaggcttctcaaactacaccaaatcaaacttcatttgct 637981  T
Q  633 tcaaacatttctctcactaaaacataaagcactc--tctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtgg 730  Q
    |||||||||||||||||||||||||||||| |||  ||||||||||||| |||||||||||||||| ||||||||||||| |||||||| |   ||||||    
T  637982 tcaaacatttctctcactaaaacataaagctctccctctctctacaatttagatgagtcttcatctcttccggccacacacgatgattccgacacggtgg 638081  T
Q  731 ccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgcc 830  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  638082 ccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatcc-tttttgtgttgattccaaatatcgcc 638180  T
Q  831 ttagatttct 840  Q
    ||||||||||    
T  638181 ttagatttct 638190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 505 - 840
Target Start/End: Complemental strand, 26447477 - 26447138
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||| | |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||  ||| || | ||    
T  26447477 ggcaaaagtaatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcaca 26447378  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttc 700  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||||    | |||||||| ||||||||||||||||| |||||| |||    
T  26447377 aattacaccaaatcaaatttcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctatacaattcagatgagtcctcatctcttc 26447278  T
Q  701 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 800  Q
    |||||||||||||||||||  | |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26447277 cggccacacatgatgattccagcgcggtggccgatggtggcaccaccgtgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 26447178  T
Q  801 tccttttttgtgttgattccaaatattgccttagatttct 840  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  26447177 tccttttttgtgttgattccaaatatcgccttagatttct 26447138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 505 - 730
Target Start/End: Original strand, 45255975 - 45256206
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||| ||||||| ||||||||||||||||||||| ||| ||  |||    
T  45255975 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatatagtgtacacgtgtaataatcctaggcttttca 45256074  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag------cactctctctctacaattcagatgagtcttcatcttt 698  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||      | ||||||||||||||||||||||||||||||||| |    
T  45256075 aactacatcaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctccccccctctctctctacaattcagatgagtcttcatctct 45256174  T
Q  699 tccggccacacatgatgattctggtgcggtgg 730  Q
    |||||||||||| |||||||| || |||||||    
T  45256175 tccggccacacaggatgattccggcgcggtgg 45256206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 906 - 1064
Target Start/End: Original strand, 638256 - 638415
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 1004  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |    
T  638256 ctacctcttgttcttcatggatccgtttcgcgttttggtcttcttctccgatccggttcagatttgttgttgtgttgaagtgttattccgatccggtttg 638355  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 1064  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||    
T  638356 aatcttgttgtggtaggttgtacgaactctccctctacctcttctaaaccgattctggat 638415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 548 - 719
Target Start/End: Complemental strand, 51837113 - 51836937
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttca-tttgcttcaaacatttctct 646  Q
    |||| |||||| |||||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  51837113 taaatacttcacaaccatcagatttaatgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcattttacttcaaacatttctct 51837014  T
Q  647 cactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttccggccacacatgatgattc 719  Q
    |||||||||||||||    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51837013 cactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggccacacatgatgattc 51836937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 906 - 1051
Target Start/End: Complemental strand, 26447073 - 26446927
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 1004  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||    
T  26447073 ctacctcttgttcttcacggattcgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtggttaagtgttgttctgatccggttcg 26446974  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaa 1051  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  26446973 aatcttgttgtggtaggctgtacgaactctccctccacctcttctaa 26446927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 1057 - 1185
Target Start/End: Original strand, 638495 - 638623
Alignment:
Q  1057 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgtt 1156  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||    
T  638495 ttatggatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtcgtttcgtgttcatgaggttcacggtttcagatctaaagttgtt 638594  T
Q  1157 actggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||| ||||||||||    
T  638595 actggattcaaaatctttgtgatgttaga 638623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 508 - 662
Target Start/End: Complemental strand, 22181307 - 22181153
Alignment:
Q  508 aaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaac 607  Q
    |||||||| |||| ||||||||||  ||||| ||||| | |||| |||||| ||||||||||||||||||||||||||||||||| |||  | |||||||    
T  22181307 aaaagttatggtgcataaggaaatccttatgcaccgtgcataaaaacttcacaaccatcagatttagtgtacacgtgtaataatcctaggtttctcaaac 22181208  T
Q  608 tacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagc 662  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22181207 tacaccaaatcaaacttcatttgcctcaaacatttctctcactaaaacataaagc 22181153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 503 - 661
Target Start/End: Original strand, 27764238 - 27764396
Alignment:
Q  503 ttggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcct 602  Q
    ||||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||  ||||||||||| ||||||||||||||||||||| ||  || ||    
T  27764238 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcgcaaccatcagatctagtgtacacgtgtaataatcctacgcttct 27764337  T
Q  603 caaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag 661  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  27764338 caaactacaccaaatcaaaccttatttgcttcaaacatttctctcactaaaacataaag 27764396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 534 - 662
Target Start/End: Original strand, 4168387 - 4168515
Alignment:
Q  534 ttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgctt 633  Q
    ||||| ||||| | ||||||||||| ||||||||||| |||||||||| |||||||||| |||  | |||||||||||||||||||||||||||||| ||    
T  4168387 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactacaccaaatcaaacttcatttgttt 4168486  T
Q  634 caaacatttctctcactaaaacataaagc 662  Q
    |||||||||||||||||||||||||||||    
T  4168487 caaacatttctctcactaaaacataaagc 4168515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 505 - 673
Target Start/End: Original strand, 21097140 - 21097308
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    |||||||||||| ||| ||||||||||  ||||| |||||   ||||||||||| |||||| |||| |||| |||||||||||||||  ||  ||  | |    
T  21097140 ggcaaaagttaccgtgcataaggaaatccttatgcaccgtgtataaacacttcacaaccattagatctagtttacacgtgtaataattctaagcttatta 21097239  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagcactctctctct 673  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  21097240 aattacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctct 21097308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 509 - 644
Target Start/End: Complemental strand, 36621762 - 36621627
Alignment:
Q  509 aaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaact 608  Q
    ||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||||||| || |||||||||||||||||| ||  || || |||||    
T  36621762 aaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcctatgcttcttaaact 36621663  T
Q  609 acaccaaatcaaacttcatttgcttcaaacatttct 644  Q
    ||||||||||||||||||||||||||||||||||||    
T  36621662 acaccaaatcaaacttcatttgcttcaaacatttct 36621627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 507 - 654
Target Start/End: Complemental strand, 38485733 - 38485590
Alignment:
Q  507 caaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaa 606  Q
    ||||||||| |||| ||||||||    ||||| ||||| | ||||| ||||| ||||||||||| || |||||||||||||||||| ||| || ||||||    
T  38485733 caaaagttatggtgcataaggaa----ttatgcaccgtgcataaacgcttcacaaccatcagatctaatgtacacgtgtaataatcctaggcttctcaaa 38485638  T
Q  607 ctacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaa 654  Q
     ||||  |||||||||||||||||||||||||||||||||||||||||    
T  38485637 atacattaaatcaaacttcatttgcttcaaacatttctctcactaaaa 38485590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 601 - 660
Target Start/End: Original strand, 18923355 - 18923414
Alignment:
Q  601 ctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaa 660  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  18923355 ctcaaactacaccaaatcaaacttcatttgcttcaaatatttctgtcactaaaacataaa 18923414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 18923812 - 18923867
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  18923812 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 18923867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 1130 - 1184
Target Start/End: Complemental strand, 22180755 - 22180701
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttag 1184  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  22180755 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttag 22180701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 548 - 620
Target Start/End: Complemental strand, 50563751 - 50563679
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||  |||  | ||||||||||||||||||||    
T  50563751 taaacacttcacaaccatcagatctagtgtacacgtgtaataattataggtttctcaaactacaccaaatcaa 50563679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 4168911 - 4168966
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  4168911 gttcacggtttcagatcttaagttgttactggattcgaaatctttgtgatgttaga 4168966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 51836700 - 51836645
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||| |||||    
T  51836700 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatattaga 51836645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1137 - 1185
Target Start/End: Original strand, 27764805 - 27764853
Alignment:
Q  1137 gtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  27764805 gtttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 27764853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 504 - 572
Target Start/End: Original strand, 50643742 - 50643810
Alignment:
Q  504 tggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagattt 572  Q
    |||||||||||| |||| ||||||||||  ||||| ||||| | |||||||||||||||||||||||||    
T  50643742 tggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcataaccatcagattt 50643810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 676 - 719
Target Start/End: Original strand, 27764451 - 27764494
Alignment:
Q  676 aattcagatgagtcttcatcttttccggccacacatgatgattc 719  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  27764451 aattcagatgagtcttcatctcttccggccacacatgatgattc 27764494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 679 - 729
Target Start/End: Original strand, 21097349 - 21097399
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtg 729  Q
    |||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  21097349 tcagatgagtcttcatctcttccggccacacatgatgattccggcgcggtg 21097399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 679 - 719
Target Start/End: Original strand, 4168567 - 4168607
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattc 719  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  4168567 tcagatgagtcttcatctcttccggccacacatgatgattc 4168607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 548 - 592
Target Start/End: Complemental strand, 6386563 - 6386519
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||    
T  6386563 taaacacttcacaaccatcagatttagtggacacgtgtaataatc 6386519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 724 - 768
Target Start/End: Complemental strand, 52296772 - 52296728
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccg 768  Q
    |||||||||||||||||||| || |||||||||||||||||||||    
T  52296772 gcggtggccggtggtggcaccactgcgccggagttcaaaactccg 52296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 21097668 - 21097723
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||| ||||||||||||||||||||||||||||  |||| ||| ||||||||||    
T  21097668 gttcacagtttcagatctgaagttgttactggatttgaaatttttgtgatgttaga 21097723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 683 - 730
Target Start/End: Complemental strand, 22181098 - 22181051
Alignment:
Q  683 atgagtcttcatcttttccggccacacatgatgattctggtgcggtgg 730  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  22181098 atgagttttcatctcttccggccacacatgatgattctggcgcggtgg 22181051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 36621334 - 36621279
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||| |||| |||||||||||||  |||||||| ||||||||||    
T  36621334 gttcacggtttcagatatgaatttgttactggatttgaaatctttgtgatgttaga 36621279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 45256465 - 45256520
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||| |||||||||| |||||||  |||||||| ||||||||||    
T  45256465 gttcacggtttcagatatgaagttgtttctggatttgaaatctttgtgatgttaga 45256520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 762
Target Start/End: Complemental strand, 12997569 - 12997531
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaa 762  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12997569 gcggtggccggtggtggcaccaccgcgccggagttcaaa 12997531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 4749054 - 4749098
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagtt-caaaactcc 767  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  4749054 gcggtggccggtggtggcaccaccgcgccggagttccaaaactcc 4749098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 679 - 719
Target Start/End: Original strand, 18923466 - 18923506
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattc 719  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  18923466 tcagatgagtcttcatctcttccgaccacacatgatgattc 18923506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 724 - 764
Target Start/End: Complemental strand, 32215963 - 32215923
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaac 764  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  32215963 gcggtggccggtggtggcaccaccgcgccggagttcgaaac 32215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 202; Significance: 1e-109; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-109
Query Start/End: Original strand, 535 - 840
Target Start/End: Complemental strand, 24737726 - 24737416
Alignment:
Q  535 tatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgcttc 634  Q
    |||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || || |||||||||||||||||||||||||||||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttcttaaactacaccaaatcaaacttcatttgcttc 24737627  T
Q  635 aaacatttctctcactaaaacataaagcact--ctctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtg--- 729  Q
    |||||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  |||||       
T  24737626 aaacatttctctcactaaaacataaaactctccctctctctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggtggtc 24737527  T
Q  730 gccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgc 829  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||  |    
T  24737526 gctggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaatagttttcacggttttagacatccttttttgtgttgattcaaaatatctc 24737427  T
Q  830 cttagatttct 840  Q
    |||||||||||    
T  24737426 cttagatttct 24737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 172; E-Value: 8e-92
Query Start/End: Original strand, 906 - 1185
Target Start/End: Original strand, 877606 - 877881
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    ||||||||||||||||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||| |||||||| |||| |||||     
T  877606 ctacctcttgttcttcacggatccgtttcgcgtttcggtcttct---ccgatccggttcggatttgttgttgtgttgaattgttgttctgatccggttca 877702  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggatttattgatgaatttgagagtggtagatgatgtttatgtga 1104  Q
    ||| ||||||||||||| |||||| ||||||||||||||||||||||  |||||  || ||||||   ||||| ||||||||||||||||||||||||||    
T  877703 aatcttgttgtggtaggttgtacgcactctccctctacctcttctaaaccgatttcgggtttattc--gaattcgagagtggtagatgatgtttatgtga 877800  T
Q  1105 ttttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  877801 ttttctatggtttagtgttcatgaggttcacagtttcagatttgaagttgttactggattcgaaatctttgtgatgttaga 877881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 505 - 840
Target Start/End: Complemental strand, 33346436 - 33346098
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| |||||||| || ||||||||||||||||||||  ||| || ||||    
T  33346436 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtgtaataattataggcttctca 33346337  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttc 700  Q
    ||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||||||||||||| ||     
T  33346336 aactacgtcaaatcaaacttcgtttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaattcagatgagtcttcatctcttt 33346237  T
Q  701 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 800  Q
    ||||||||||||||||||| || | |||||||| | ||||||| |||||||  ||||||||||||| |||||||| |||||    |||||| ||||||||    
T  33346236 cggccacacatgatgattccggcgtggtggccgatagtggcaccaccgcgctagagttcaaaactctgtccaaat-aaaaaaaaatcacgggtttagaca 33346138  T
Q  801 tccttttttgtgttgattccaaatattgccttagatttct 840  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  33346137 tccttttttgtgtcgattccaaatatcgccttagatttct 33346098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 164; E-Value: 5e-87
Query Start/End: Original strand, 548 - 838
Target Start/End: Original strand, 877251 - 877540
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctc 647  Q
    ||||||||||| |||||| ||||   |||||||||| |||||||| ||  || |||||||||||||||||||||||||||||||||||||||||||||||    
T  877251 taaacacttcacaaccattagatcaggtgtacacgtataataatcataagcttctcaaactacaccaaatcaaacttcatttgcttcaaacatttctctc 877350  T
Q  648 actaaaacataaagcactc--tctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtggccggtggtggcacaa 745  Q
    ||||||||| ||||| |||  |||||||||||||   | |||||||||||| ||| |||||||||||||||||| || | |||||||| ||||||||| |    
T  877351 actaaaacaaaaagctctccctctctctacaatt---aggagtcttcatctcttcaggccacacatgatgattccggcgtggtggccgatggtggcacca 877447  T
Q  746 ccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattgccttagattt 838  Q
    ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  877448 ccgcgtcggagttcaaaactccgtccaaatcaaaaagttttcacaattttagacatcattttttgtgttgattccaaatatcgccttaaattt 877540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 150; E-Value: 1e-78
Query Start/End: Original strand, 906 - 1183
Target Start/End: Complemental strand, 33346031 - 33345747
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 1004  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33346031 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 33345932  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcga------------ttatggatttattgatgaatttgagagtggtagatg 1092  Q
    ||| ||||||| |     |||  |||||||||||||| |||||||||  |||            || |||||| |||||||| ||||||||||||| |||    
T  33345931 aatcttgttgttg-----tgt-tgaactctccctctatctcttctaaaccgattctggatgttcttctggattcattgatgactttgagagtggtaaatg 33345838  T
Q  1093 atgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgtta 1183  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||  |||| |||||||| ||||||||    
T  33345837 atgtttatgtgattttctgtggtttagtgttcatgaggtttacggtttcagatctgaatttgttactaaattcgaaatctttgtgatgtta 33345747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 906 - 1064
Target Start/End: Complemental strand, 24737351 - 24737192
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 1004  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24737351 ctacctcttgttcttcacggctccgtttcacgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 24737252  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 1064  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  24737251 aatcttgttgtggtaggctgtacgaactctccctctacctcttctaaaccgattctggat 24737192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 1057 - 1185
Target Start/End: Complemental strand, 24737112 - 24736985
Alignment:
Q  1057 ttatggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatctgaagttgtt 1156  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  24737112 ttatggatttattgatgaattcgagagtggtagatgatgtttatgtgattttatgcggtttagtgttcatgaggttcacggtttcagatctgaagttgtt 24737013  T
Q  1157 actggattcaaaatctttatgatgttaga 1185  Q
    | ||||||| |||||||| ||||||||||    
T  24737012 a-tggattcgaaatctttgtgatgttaga 24736985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 18611232 - 18611304
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || ||||||| ||||||||||||    
T  18611232 taaacacttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctcaaaccacaccaaatcaa 18611304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 524 - 620
Target Start/End: Original strand, 29157245 - 29157341
Alignment:
Q  524 aaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||  ||||| ||||| | ||||||||| | ||||||||||| ||||||||||||||||||||  ||| || ||||||||||||||||||||    
T  29157245 aaggaaatccttatgcaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaataatactaggcttctcaaactacaccaaatcaa 29157341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 505 - 592
Target Start/End: Original strand, 34399641 - 34399728
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    ||||||||||| |||| ||||||||||  ||||| ||||||  ||||||||||| || |||||||| |||||||||||||||||||||    
T  34399641 ggcaaaagttatggtgcataaggaaatccttatgcaccgtatataaacacttcacaatcatcagatctagtgtacacgtgtaataatc 34399728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 724 - 808
Target Start/End: Complemental strand, 3042435 - 3042352
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 808  Q
    |||||||||||||||||| | ||||||||||||||  ||||||| ||| | ||||||| |||| ||| ||||| |||||||||||    
T  3042435 gcggtggccggtggtggcgccaccgcgccggagttttaaactcc-tccgattcaaaaactttttacgtttttaaacatccttttt 3042352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 505 - 620
Target Start/End: Complemental strand, 15035040 - 15034920
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagact----- 599  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||   |||| ||||||||||| ||||||||| ||||||||||| ||| ||         
T  15035040 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaatcattcacaaccatcagatctagtgtacatgtgtaataatcataggcttctcc 15034941  T
Q  600 cctcaaactacaccaaatcaa 620  Q
     ||||||||||||||||||||    
T  15034940 tctcaaactacaccaaatcaa 15034920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 725 - 761
Target Start/End: Complemental strand, 5995725 - 5995689
Alignment:
Q  725 cggtggccggtggtggcacaaccgcgccggagttcaa 761  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5995725 cggtggccggtggtggcaccaccgcgccggagttcaa 5995689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 724 - 808
Target Start/End: Complemental strand, 20216059 - 20215976
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 808  Q
    ||||||||||| |||||||| |||||||||||| |||||||| | ||| | ||||||| |||| ||  ||||| |||||||||||    
T  20216059 gcggtggccggcggtggcaccaccgcgccggagctcaaaacttc-tccgattcaaaaactttttacatttttaaacatccttttt 20215976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 724 - 808
Target Start/End: Complemental strand, 22110080 - 22109997
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 808  Q
    ||||||||||| |||||||| |||||||||||| |||||||| | ||| | ||||||| |||| ||  ||||| |||||||||||    
T  22110080 gcggtggccggcggtggcaccaccgcgccggagctcaaaacttc-tccgattcaaaaactttttacatttttaaacatccttttt 22109997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 724 - 808
Target Start/End: Complemental strand, 24919211 - 24919128
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 808  Q
    |||||||||||  ||||||| ||||||||||||||| ||||||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  24919211 gcggtggccggcagtggcaccaccgcgccggagttcgaaactcc-tccgattcaaaaactttttacatttttaaacatccttttt 24919128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 24296438 - 24296481
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  24296438 gcggtggccggcggtggcaccaccacgccggagttcaaaactcc 24296481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 24310469 - 24310512
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||    
T  24310469 gcggtggccggcggtggcaccaccacgccggagttcaaaactcc 24310512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 27048684 - 27048727
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  27048684 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 27048727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 27058928 - 27058971
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  27058928 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc 27058971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 766
Target Start/End: Original strand, 30996958 - 30997001
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 766  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  30996958 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 30997001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 505 - 840
Target Start/End: Original strand, 25192892 - 25193230
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| |||||| |||| ||||||||||||||||||||  ||| || ||||    
T  25192892 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccattagatctagtgtacacgtgtaataattctaggcttctca 25192991  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag----cactctctctctacaattcagatgagtcttcatcttttc 700  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    | |||||||||||||||||| | |||||||||||| |||    
T  25192992 aattacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaattcatacgagtcttcatctcttc 25193091  T
Q  701 cggccacacatgatgattctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagaca 800  Q
    |||||||||||||||||||| | || ||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||    |||||||||||||||    
T  25193092 cggccacacatgatgattctagcgcagtggccggtggtggcaccaccgcgccggagttcaaaattccatccaaatcaaaaa-aaatcacggttttagaca 25193190  T
Q  801 tccttttttgtgttgattccaaatattgccttagatttct 840  Q
    |||||||||||||||||| || |||| |||||||||||||    
T  25193191 tccttttttgtgttgatttcatatatcgccttagatttct 25193230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 143; E-Value: 2e-74
Query Start/End: Original strand, 633 - 840
Target Start/End: Complemental strand, 4579763 - 4579552
Alignment:
Q  633 tcaaacatttctctcactaaaacataaagcactc----tctctctacaattcagatgagtcttcatcttttccggccacacatgatgattctggtgcggt 728  Q
    |||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  ||      
T  4579763 tcaaacatttctctcactaaaacataaagctctccctctctctctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacgac 4579664  T
Q  729 ggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatattg 828  Q
    |||||  |||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  4579663 ggccgccggtggcaccaccgcgctggagttcaatactccgtccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcg 4579564  T
Q  829 ccttagatttct 840  Q
    ||||||||||||    
T  4579563 ccttagatttct 4579552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 4e-66
Query Start/End: Original strand, 505 - 730
Target Start/End: Complemental strand, 18298176 - 18297947
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| ||| || ||||    
T  18298176 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca 18298077  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaa----gcactctctctctacaattcagatgagtcttcatcttttc 700  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||     | |||||||||||||||| |||||||||||||||| |||    
T  18298076 aactacaccaaatcaaacttcatttgcttcaagcgtttctctcactaaaacataaatctctccctctctctctacaatttagatgagtcttcatctcttc 18297977  T
Q  701 cggccacacatgatgattctggtgcggtgg 730  Q
    || |||||||||||||||| || |||||||    
T  18297976 cgaccacacatgatgattccggcgcggtgg 18297947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 906 - 1064
Target Start/End: Original strand, 25193297 - 25193456
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgat-cggttcg 1004  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25193297 ctacctcttgttcttcacagatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatccggttcg 25193396  T
Q  1005 aattttgttgtggtaggctgtacgaactctccctctacctcttctaactcgattatggat 1064  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||    
T  25193397 aatcttgttgtggtaggttgtacgaactctccctctacctcttctaaaccgattctggat 25193456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 906 - 1033
Target Start/End: Complemental strand, 4579488 - 4579360
Alignment:
Q  906 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccgatccggttcggatttgttgttgtgttgaagtgttgttccgatc-ggttcg 1004  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  4579488 ctacctcttgttcttcacggatccgtttcgcgttttggtcttcttctccaatacggttcggatttgttgttgtgttgaagtgttgtttcgatctggttcg 4579389  T
Q  1005 aattttgttgtggtaggctgtacgaactc 1033  Q
    ||| ||||||| |||||||||||||||||    
T  4579388 aatcttgttgtcgtaggctgtacgaactc 4579360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 504 - 679
Target Start/End: Original strand, 20709773 - 20709950
Alignment:
Q  504 tggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctc 603  Q
    |||||||||||| |||| ||||||||||  ||||  ||||| | ||||||||||| ||||||||||| |||||||||| |||||||||| ||  || |||    
T  20709773 tggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttctc 20709872  T
Q  604 aaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag--cactctctctctacaatt 679  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||||||||||||||    
T  20709873 aaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctacaatt 20709950  T

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Target: chr2; HSP #7
Raw Score: 84; E-Value: 3e-39
Query Start/End: Original strand, 1060 - 1147
Target Start/End: Complemental strand, 4579315 - 4579228
Alignment:
Q  1060 tggatttattgatgaatttgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 1147  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4579315 tggatttattgatgaattcgagagtggtagatgatgtttatgtgattttctgtggtttagtgttcatgaggttcacggtttcagatct 4579228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 548 - 620
Target Start/End: Original strand, 25995330 - 25995402
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    |||| |||||| ||||||||||||||||||||||||||||||||| ||| || |||||| |||||||||||||    
T  25995330 taaatacttcacaaccatcagatttagtgtacacgtgtaataatcctaggctactcaaattacaccaaatcaa 25995402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 20710318 - 20710373
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  20710318 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 20710373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 548 - 620
Target Start/End: Complemental strand, 4281810 - 4281738
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctcaaactacaccaaatcaa 620  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||| |||  | ||||||||||| ||||||||    
T  4281810 taaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggtttctcaaactacagcaaatcaa 4281738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 506 - 592
Target Start/End: Complemental strand, 14551382 - 14551297
Alignment:
Q  506 gcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    |||||||||| |||| ||||||||||| ||||| || || | ||||||||||| ||||||||||| ||||||||| |||||||||||    
T  14551382 gcaaaagttatggtgcataaggaaattcttatgcac-gtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataatc 14551297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 717 - 766
Target Start/End: Complemental strand, 22186131 - 22186082
Alignment:
Q  717 ttctggtgcggtggccggtggtggcacaaccgcgccggagttcaaaactc 766  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  22186131 ttctggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactc 22186082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 18297688 - 18297633
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||| ||||||||||    
T  18297688 gttcacggtttcagatctgaagttgttacaggattcttaatctttgtgatgttaga 18297633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 523 - 595
Target Start/End: Complemental strand, 4579865 - 4579793
Alignment:
Q  523 taaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatctta 595  Q
    |||||||||  ||||| ||| | | ||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  4579865 taaggaaatccttatgcaccatgcataaacactttacaaccatcagatctagtgtacacgtgtaataatctta 4579793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 728 - 807
Target Start/End: Original strand, 17686391 - 17686470
Alignment:
Q  728 tggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatc-aaaaagttttcacggttttagacatcctttt 807  Q
    |||||||||||||||| ||||||||||||||  ||||||| || ||||| |||||||||| ||| ||||| ||||||||||    
T  17686391 tggccggtggtggcaccaccgcgccggagtttcaaactcc-tctaaatcaaaaaagtttttacgtttttaaacatcctttt 17686470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 679 - 726
Target Start/End: Original strand, 20709981 - 20710028
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctggtgcg 726  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||    
T  20709981 tcagatgagtcttcatctcttccggtcacacatgatgattccggtgcg 20710028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 724 - 762
Target Start/End: Complemental strand, 20622492 - 20622454
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaa 762  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20622492 gcggtggccggtggtggcaccaccgcgccggagttcaaa 20622454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 592
Target Start/End: Complemental strand, 36636973 - 36636915
Alignment:
Q  534 ttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    ||||||||| ||| ||||||||||| |||||||||||||  | ||||||||||||||||    
T  36636973 ttatgtaccctacataaacacttcacaaccatcagatttgttttacacgtgtaataatc 36636915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 727 - 808
Target Start/End: Complemental strand, 28479967 - 28479887
Alignment:
Q  727 gtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 808  Q
    ||||||||||||||| | ||||||||||||||  ||||| ||||||| ||||||| |||| ||  ||||| |||||||||||    
T  28479967 gtggccggtggtggcgccaccgcgccggagttttaaact-cgtccaattcaaaaactttttacatttttaaacatccttttt 28479887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 548 - 592
Target Start/End: Original strand, 5098760 - 5098804
Alignment:
Q  548 taaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||    
T  5098760 taaacacttcacaaccatcaaatttattgtacacgtgtaataatc 5098804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 33308194 - 33308238
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactcc 767  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  33308194 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactcc 33308238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 21851547 - 21851590
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  21851547 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 21851590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 21859982 - 21860025
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    |||||||||||||||||||| ||||||||||||||  |||||||    
T  21859982 gcggtggccggtggtggcaccaccgcgccggagttttaaactcc 21860025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 766
Target Start/End: Complemental strand, 25262627 - 25262584
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggag-ttcaaaactc 766  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  25262627 gcggtggccggtggtggcaccaccgcgccggagtttcaaaactc 25262584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 27425297 - 27425340
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  27425297 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 27425340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Original strand, 27440343 - 27440386
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  27440343 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 27440386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 724 - 767
Target Start/End: Complemental strand, 39756332 - 39756289
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactcc 767  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  39756332 gcggtggccggcggtggcaccaccgcgccggagttcgaaactcc 39756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 724 - 757
Target Start/End: Original strand, 34543055 - 34543088
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagt 757  Q
    |||||||||||||||||||| |||||||||||||    
T  34543055 gcggtggccggtggtggcaccaccgcgccggagt 34543088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 126; Significance: 2e-64; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 502 - 719
Target Start/End: Complemental strand, 25300 - 25072
Alignment:
Q  502 attggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcc 601  Q
    |||||||||||||| |||| ||||||||||  ||||| ||||| | ||||||||||| |||||||||||||||||||||||||| ||||||||||  | |    
T  25300 attggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtcataatcttaggtttc 25201  T
Q  602 tcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaa---------acataaagc--actctctctctacaattcagatgagtct 690  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||   | |||||||||||||||||||||||||    
T  25200 tcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaaacataaagacataaagctttccctctctctacaattcagatgagtct 25101  T
Q  691 tcatcttttccggccacacatgatgattc 719  Q
    |||||| ||||||||||||||||||||||    
T  25100 tcatctcttccggccacacatgatgattc 25072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Complemental strand, 24828 - 24773
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  24828 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 24773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 99; Significance: 3e-48; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 504 - 679
Target Start/End: Original strand, 13612 - 13789
Alignment:
Q  504 tggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctc 603  Q
    |||||||||||| |||| ||||||||||  ||||  ||||| | ||||||||||| ||||||||||| |||||||||| |||||||||| ||  || |||    
T  13612 tggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttctc 13711  T
Q  604 aaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaag--cactctctctctacaatt 679  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | | ||||||||||||||    
T  13712 aaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctacaatt 13789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 14157 - 14212
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  14157 gttcacggtttcagatctgaagttgttactggattcgaaatctttgtgatgttaga 14212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 679 - 726
Target Start/End: Original strand, 13820 - 13867
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctggtgcg 726  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||    
T  13820 tcagatgagtcttcatctcttccggtcacacatgatgattccggtgcg 13867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 96; Significance: 2e-46; HSPs: 3)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 505 - 660
Target Start/End: Original strand, 27607 - 27762
Alignment:
Q  505 ggcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatcttagactcctca 604  Q
    ||||||||||| |||| |||||||||   ||||||||||| | ||||||||||| ||| || |||| ||||||||||||||||||||  ||| || ||||    
T  27607 ggcaaaagttatggtgcataaggaaaaacttatgtaccgtgcataaacacttcacaactataagatctagtgtacacgtgtaataattctaggcttctca 27706  T
Q  605 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaa 660  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27707 aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaa 27762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 1130 - 1185
Target Start/End: Original strand, 28157 - 28212
Alignment:
Q  1130 gttcacggtttcagatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  28157 gttcacggtttcagatctgaagttgttactagattcaaaatctttgtgatgttaga 28212  T

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Target: scaffold0194; HSP #3
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 679 - 730
Target Start/End: Original strand, 27816 - 27867
Alignment:
Q  679 tcagatgagtcttcatcttttccggccacacatgatgattctggtgcggtgg 730  Q
    |||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  27816 tcagatgagtcttcatctcttccggccacacatgatgattccggcgcggtgg 27867  T

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Target: scaffold0337 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 508 - 592
Target Start/End: Original strand, 7020 - 7104
Alignment:
Q  508 aaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    |||||||| |||| |||| ||||| |||||  ||||| | ||||||||||| ||||||||||| |||||||||| ||||||||||    
T  7020 aaaagttatggtgcataacgaaatctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatc 7104  T

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Target: scaffold1120 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 724 - 803
Target Start/End: Complemental strand, 430 - 351
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatc-aaaaagttttcacggttttagacatcc 803  Q
    |||||||||||||||||||| ||||||||||||||  ||||||| || ||||| |||||||||| ||| ||||| ||||||    
T  430 gcggtggccggtggtggcaccaccgcgccggagtttcaaactcc-tctaaatcaaaaaagtttttacgtttttaaacatcc 351  T

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Target: scaffold0206 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 724 - 808
Target Start/End: Complemental strand, 19550 - 19467
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 808  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  19550 gcggtggccggcggtggcaccaccgcgccggagttctaaactcc-tccgattcaaaaactttttacatttttaaacatccttttt 19467  T

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Target: scaffold0544 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 506 - 592
Target Start/End: Complemental strand, 10739 - 10653
Alignment:
Q  506 gcaaaagttacggtggataaggaaatttttatgtaccgtacgtaaacacttcataaccatcagatttagtgtacacgtgtaataatc 592  Q
    |||||||||| |||| ||||||||||  ||||  ||||| | ||||||||||| ||||||||||| |||||| ||  ||||||||||    
T  10739 gcaaaagttatggtgcataaggaaatccttatacaccgtgcataaacacttcacaaccatcagatctagtgtgcatatgtaataatc 10653  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1142 - 1185
Target Start/End: Complemental strand, 203453 - 203410
Alignment:
Q  1142 agatctgaagttgttactggattcaaaatctttatgatgttaga 1185  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||    
T  203453 agatctgaagttgttactcgattcgaaatctttgtgatgttaga 203410  T

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Target: scaffold1896 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold1896
Description:

Target: scaffold1896; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 724 - 762
Target Start/End: Complemental strand, 475 - 437
Alignment:
Q  724 gcggtggccggtggtggcacaaccgcgccggagttcaaa 762  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  475 gcggtggccggtagtggcaccaccgcgccggagttcaaa 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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