View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0117_low_5 (Length: 582)

Name: NF0117_low_5
Description: NF0117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0117_low_5
NF0117_low_5
[»] chr1 (5 HSPs)
chr1 (13-309)||(47523874-47524170)
chr1 (150-308)||(50204709-50204866)
chr1 (151-308)||(18990085-18990242)
chr1 (152-306)||(33966838-33966994)
chr1 (174-264)||(43866439-43866530)
[»] chr4 (10 HSPs)
chr4 (151-306)||(49577306-49577461)
chr4 (151-309)||(4289823-4289981)
chr4 (151-309)||(39598853-39599011)
chr4 (152-309)||(2588236-2588393)
chr4 (151-309)||(16497454-16497612)
chr4 (152-309)||(5650486-5650643)
chr4 (151-308)||(55911341-55911499)
chr4 (218-305)||(52249337-52249424)
chr4 (220-309)||(16497714-16497803)
chr4 (151-234)||(11157107-11157190)
[»] chr8 (10 HSPs)
chr8 (151-309)||(29168252-29168409)
chr8 (151-309)||(3376074-3376230)
chr8 (152-309)||(1548344-1548501)
chr8 (151-309)||(23033582-23033740)
chr8 (151-309)||(34784243-34784401)
chr8 (151-309)||(3117910-3118068)
chr8 (151-305)||(20900977-20901132)
chr8 (211-308)||(1469106-1469204)
chr8 (151-211)||(3277750-3277810)
chr8 (151-265)||(36881747-36881861)
[»] chr2 (14 HSPs)
chr2 (151-309)||(36536126-36536284)
chr2 (151-309)||(44673368-44673526)
chr2 (146-305)||(25438500-25438659)
chr2 (151-309)||(37154590-37154741)
chr2 (158-295)||(41714894-41715031)
chr2 (150-308)||(42975600-42975758)
chr2 (151-234)||(33391759-33391842)
chr2 (152-206)||(26377615-26377669)
chr2 (196-308)||(40712572-40712681)
chr2 (211-266)||(26377567-26377625)
chr2 (151-258)||(950490-950597)
chr2 (151-234)||(21005775-21005858)
chr2 (151-234)||(39573913-39573996)
chr2 (151-234)||(6537162-6537245)
[»] chr5 (8 HSPs)
chr5 (151-309)||(7992132-7992290)
chr5 (152-274)||(28276946-28277068)
chr5 (176-308)||(41106730-41106862)
chr5 (162-305)||(10916858-10917001)
chr5 (192-309)||(5240648-5240765)
chr5 (151-305)||(41377584-41377729)
chr5 (232-306)||(43280947-43281021)
chr5 (151-234)||(28828226-28828309)
[»] chr3 (6 HSPs)
chr3 (151-308)||(7227282-7227437)
chr3 (151-309)||(9454823-9454981)
chr3 (152-309)||(32130363-32130520)
chr3 (151-309)||(53208430-53208588)
chr3 (146-294)||(7323058-7323206)
chr3 (151-308)||(50064072-50064229)
[»] chr7 (9 HSPs)
chr7 (151-309)||(12858970-12859128)
chr7 (151-305)||(32775375-32775529)
chr7 (151-305)||(19886776-19886930)
chr7 (151-309)||(36167473-36167631)
chr7 (151-271)||(46082204-46082329)
chr7 (152-309)||(5465442-5465591)
chr7 (151-308)||(19780832-19780993)
chr7 (151-210)||(11599455-11599514)
chr7 (234-308)||(46082338-46082412)
[»] chr6 (6 HSPs)
chr6 (151-309)||(13425443-13425601)
chr6 (160-305)||(18133656-18133801)
chr6 (160-295)||(23889796-23889931)
chr6 (151-308)||(25100780-25100938)
chr6 (176-269)||(6539314-6539407)
chr6 (151-234)||(10875612-10875695)
[»] scaffold0325 (1 HSPs)
scaffold0325 (151-308)||(8547-8705)
[»] scaffold0302 (1 HSPs)
scaffold0302 (151-305)||(17295-17449)
[»] scaffold0768 (1 HSPs)
scaffold0768 (203-308)||(4392-4495)


Alignment Details
Target: chr1 (Bit Score: 285; Significance: 1e-159; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 285; E-Value: 1e-159
Query Start/End: Original strand, 13 - 309
Target Start/End: Complemental strand, 47524170 - 47523874
Alignment:
Q  13 gctgttgctacaaccggtacgtaattctgcagaacagatgaaaccttggcctggccctgatgatgatgaagacagaggcaataatagcacttactactga 112  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47524170 gctgctgctacaaccggtacctaattctgcagaacagatgaaaccttggcctggccctgatgatgatgaagacagaggaaataatagcacttactactga 47524071  T
Q  113 agttgaatccaatgtcagaatgtataaccatcttcacgaatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaa 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47524070 agttgaatccaatgtcagaatgtataaccatcttcacgaatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaa 47523971  T
Q  213 ggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47523970 ggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 47523874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 150 - 308
Target Start/End: Complemental strand, 50204866 - 50204709
Alignment:
Q  150 gaatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggtt 249  Q
    ||||||||||||| ||||| |  || ||||||||||| ||| |||||||||  |||||||  |||  ||||||||| |||||||||| |||| |||||||    
T  50204866 gaatgtagtcaggttcgagtttttaagtaggatcggtaggctggtgaaagattgtaaacatgagggtcgtaacacgcttcgtaagtaagatcagtaggtt 50204767  T
Q  250 gttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
    ||||||||||||||| |||| | | | |||||||||| | |||||||||||||||||||    
T  50204766 gttgatagagttgagtgaaa-aaacagagaaaatagaggaaaaacagaggaaccaagca 50204709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 151 - 308
Target Start/End: Original strand, 18990085 - 18990242
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||| ||||| ||||||| | ||||| | || ||||||||||| ||||||||| || |||||| ||||| |||| ||| || ||||||||||||||    
T  18990085 aatgtagttaggattgagatcccacgtagggtaggacggccggtgaaggaacgtaaatacgaggaacataacatggtttgtatgttggatcggtaggttg 18990184  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
    |||||||||||||||||||||   | | |||||||| | |||||| | ||||||||||    
T  18990185 ttgatagagttgagagaaataataagataaaatagaggaaaaacacaagaaccaagca 18990242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 152 - 306
Target Start/End: Complemental strand, 33966994 - 33966838
Alignment:
Q  152 atgtagtcaggatcgagatc--ctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggtt 249  Q
    ||||||||||||  ||||||  ||| |||||||| || |||||||||| |||||||||  | ||||| ||||||| ||||||||||||||||||||||||    
T  33966994 atgtagtcaggactgagatctcctacgtaggatcagtaggccggtgaaggaacgtaaaagcgaggaatgtaacacagttcgtaagtaggatcggtaggtt 33966895  T
Q  250 gttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaag 306  Q
     ||||||||||||||||| ||| | |||| | ||||| | | |||||||||| ||||    
T  33966894 attgatagagttgagagatataaacatagcatatagaggaataacagaggaatcaag 33966838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 43866530 - 43866439
Alignment:
Q  174 atgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtag-gttgttgatagagttgag 264  Q
    ||||||||| ||||||||  | ||||||||||||||| |||||||||||||||||||||||||||||| ||||  || ||||||||||||||    
T  43866530 atgtaggattggtcggccaattaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcagtagcttttttgatagagttgag 43866439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 4e-61; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 151 - 306
Target Start/End: Original strand, 49577306 - 49577461
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  49577306 aatgtagtcatgatcgagatcctacgtaggatcggtcggccggtgaaagaatgtaaacacgaggaacgtaacacagttcataagtaggatcggtaggttg 49577405  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaag 306  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  49577406 ttgatagagttgagagaaatagatagagaaaatagagggaaaacagaggaaccaag 49577461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 4289823 - 4289981
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  4289823 aatgtagtcagtatcgagatcctacgtaggatcggttggccgttgaaagaacttaaacacgaggaacgtaacccggttcgtaagtaggatcggtaggttg 4289922  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  4289923 ttgatagagttgagagaaatagatagagaaaatagagggaaaacagaggaaccaagcat 4289981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 39598853 - 39599011
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||    
T  39598853 aatgtagtcaggatcgagatcctatgtaggatcggtcgggcagtgaaagaacgtaaacacgaggaacgtagcactgttcgtaagtaggatcggtaggttg 39598952  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |||| ||||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  39598953 ttgacagagttgagcgaaatagatagagaaaatagagggaaaacagaggaaccaagcat 39599011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 152 - 309
Target Start/End: Original strand, 2588236 - 2588393
Alignment:
Q  152 atgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgt 251  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  2588236 atgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttgt 2588335  T
Q  252 tgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    ||||||| |||||||||||| | |  ||||||||| ||||||||| ||||||||||||    
T  2588336 tgatagaattgagagaaatatatagggaaaatagagggaaaacaggggaaccaagcat 2588393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 16497454 - 16497612
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  16497454 aatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttg 16497553  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    | |||||| |||||||||||| | |  ||||||||| ||||||||| ||| ||||||||    
T  16497554 tcgatagaattgagagaaatatatagggaaaatagagggaaaacaggggagccaagcat 16497612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 152 - 309
Target Start/End: Original strand, 5650486 - 5650643
Alignment:
Q  152 atgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgt 251  Q
    |||||||||||| |||| |||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||    
T  5650486 atgtagtcaggaacgagttcctacataggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggctgt 5650585  T
Q  252 tgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
     |||||| |||||||||||| | |  ||||||||| |||||||| |||||||||||||    
T  5650586 cgatagaattgagagaaatatatagggaaaatagagggaaaacaaaggaaccaagcat 5650643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 151 - 308
Target Start/End: Complemental strand, 55911499 - 55911341
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||||| ||||| | ||| ||||||| ||| ||| ||||||| | | ||||||   ||  ||||||||| ||  ||||||||||||||||||||    
T  55911499 aatgtagtcaggttcgagtttctaagtaggattggtaggctggtgaaatatcataaacatgtgggtcgtaacacgatttataagtaggatcggtaggttg 55911400  T
Q  251 ttgatagagttgagagaaataga--gatagaaaatagacggaaaacagaggaaccaagca 308  Q
    ||||||||||||||| ||||| |   | |||||||||| |||||||||||||||||||||    
T  55911399 ttgatagagttgaga-aaataaaaccagagaaaatagagggaaaacagaggaaccaagca 55911341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 218 - 305
Target Start/End: Original strand, 52249337 - 52249424
Alignment:
Q  218 gtaacacggttcgtaagtaggatcggtaggttgttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaa 305  Q
    |||||||||||||| |||||||||| |||||||| |||||| |||||||||||| | |  ||||||||| ||||||||||||||||||    
T  52249337 gtaacacggttcgtcagtaggatcgataggttgtcgatagaattgagagaaatatatagggaaaatagagggaaaacagaggaaccaa 52249424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 309
Target Start/End: Original strand, 16497714 - 16497803
Alignment:
Q  220 aacacggttcgtaagtaggatcggtaggttgttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||||| | |  ||||||||| ||||||||| ||| ||||||||    
T  16497714 aacacggttcgtaagtaggatcgataggttgtcgatagaattgagagaaatatatagggaaaatagagggaaaacaggggagccaagcat 16497803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 11157190 - 11157107
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaag 234  Q
    ||||||||||||| |||| | ||| ||||| ||| |||||||||||| | |||||||  |  ||||||||||||||||| ||||    
T  11157190 aatgtagtcaggaacgagtttctacgtaggttcgatcggccggtgaagggacgtaaagtcggggaacgtaacacggttcataag 11157107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 1e-55; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 29168252 - 29168409
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  29168252 aatgtagtcaggatagagatcctacataggatcggtcggccggtgaaagaacgtaaacatgaggaacgtaacacggttcgtaagtaggatcggtaggttg 29168351  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    ||||||||||||||||| ||||| | |||||||||  || |||||||||||||||||||    
T  29168352 ttgatagagttgagagagatagatagagaaaatag-ggggaaacagaggaaccaagcat 29168409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 3376074 - 3376230
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||||| |||||||| ||||| |||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3376074 aatgtagtcaggatcaagatcctacgtaggttcggtccgccgatgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcggtaggttg 3376173  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    ||||||||||||||| ||||  ||||||| |||||| | ||||||||||||||||||||    
T  3376174 ttgatagagttgagataaat--agatagagaatagaggaaaaacagaggaaccaagcat 3376230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 152 - 309
Target Start/End: Complemental strand, 1548501 - 1548344
Alignment:
Q  152 atgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgt 251  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  1548501 atgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttgt 1548402  T
Q  252 tgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    ||||||| |||||||||||  | |  ||||||||| ||||||||| ||||||||||||    
T  1548401 tgatagaattgagagaaatgtatagggaaaatagagggaaaacaggggaaccaagcat 1548344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 151 - 309
Target Start/End: Complemental strand, 23033740 - 23033582
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  23033740 aatgtagtcaggaacgagttcctacgtaggttcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttg 23033641  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |  ||||| |||||||||||| | |  ||||||||| ||||||||| ||||||||||||    
T  23033640 tcaatagaattgagagaaatatatagggaaaatagagggaaaacaggggaaccaagcat 23033582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 34784243 - 34784401
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  34784243 aatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacataaacacgaggaacgtaacacggtttgtaagtaggatcgttaggttg 34784342  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    | |||||| |||||||||||| | |  ||||||| | ||||||||| ||||||||||||    
T  34784343 tcgatagaattgagagaaatatatagggaaaatatagggaaaacaggggaaccaagcat 34784401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 151 - 309
Target Start/End: Complemental strand, 3118068 - 3117910
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| |||||  |||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  3118068 aatgtagtcaggaacgagttcctacataggattggtcggccggtgaaagaacgtaaacacgaggaacgtaacatggttcgtaagtaggatcgataggttg 3117969  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    | |||||| |||||||||||| | |  ||||||||| ||||| ||| ||||||||||||    
T  3117968 tagatagaattgagagaaatatatagggaaaatagagggaaagcaggggaaccaagcat 3117910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 151 - 305
Target Start/End: Complemental strand, 20901132 - 20900977
Alignment:
Q  151 aatgtagtcaggat-cgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggtt 249  Q
    |||||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||    
T  20901132 aatgtagtcaggaaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtgggatcaataggtt 20901033  T
Q  250 gttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaa 305  Q
    || |||||| |||||||||||| | |  ||||||||| ||||||||| ||||||||    
T  20901032 gtcgatagaattgagagaaatatacagggaaaatagagggaaaacaggggaaccaa 20900977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 211 - 308
Target Start/End: Complemental strand, 1469204 - 1469106
Alignment:
Q  211 aaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagagttgagaga-aatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| || | | | | || ||||| |||||| ||||||||||||||    
T  1469204 aaggaacgaaacacggtccgtaagtaggatcggtaggttgttcatagagttgagagagaaaaaacagaaaatatagagggaaaagagaggaaccaagca 1469106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 3277810 - 3277750
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacaca 211  Q
    ||||||||||||| |||| |||||  |||||||||||||||||||||||||||||||||||    
T  3277810 aatgtagtcaggaacgagttcctacttaggatcggtcggccggtgaaagaacgtaaacaca 3277750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 36881861 - 36881747
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||||| || || |  || ||||||||||  ||| ||||||||| ||||||| | | |   |||||||| ||||||||||||| |||| |||||    
T  36881861 aatgtagtcaggttcaagtttttaagtaggatcggcaggctggtgaaagatcgtaaacgcgaaggttgtaacacgattcgtaagtaggaccggttggttg 36881762  T
Q  251 ttgatagagttgaga 265  Q
    |||||||| ||||||    
T  36881761 ttgatagatttgaga 36881747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 1e-55; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 36536126 - 36536284
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||| |||||||||||| ||||||| |||||||| ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||    
T  36536126 aatgtagtcagaatcgagatcctacgtaggattggtcggccagtgaaagaaagtaaacacaaggcacgtaacacggtttgtaagtaggatcggtaggttg 36536225  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |||||||||||||||| |||||| | |||||||||| | ||||||||||||||||||||    
T  36536226 ttgatagagttgagaggaatagatagagaaaatagaggaaaaacagaggaaccaagcat 36536284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 309
Target Start/End: Complemental strand, 44673526 - 44673368
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  44673526 aatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttg 44673427  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |||||||| |||||||||||| | |  ||||||||| ||||||||  ||||||||||||    
T  44673426 ttgatagaattgagagaaatatatagggaaaatagagggaaaacaagggaaccaagcat 44673368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 146 - 305
Target Start/End: Complemental strand, 25438659 - 25438500
Alignment:
Q  146 tcacgaatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggta 245  Q
    |||| ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  25438659 tcaccaatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgata 25438560  T
Q  246 ggttgttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaa 305  Q
    |||||| |||| |  ||||||||||| | |  ||||||||| ||||||||| ||| ||||    
T  25438559 ggttgtcgatataagtgagagaaatatatagggaaaatagagggaaaacaggggagccaa 25438500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 37154590 - 37154741
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||| ||||||||||||| |||| |||||| ||  ||||||||||||||||||| |||||||||||||||||||||||||||||| |||         
T  37154590 aatgtagtcaagatcgagatcctacgtagaatcggttggttggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcagta----- 37154684  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
      |||||| |||||||||||  | | |||||||||| || ||||| |||||||| ||||    
T  37154685 --gatagaattgagagaaatgtatagagaaaatagagggtaaacaaaggaaccatgcat 37154741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 158 - 295
Target Start/End: Original strand, 41714894 - 41715031
Alignment:
Q  158 tcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatag 257  Q
    ||||||||||||||||| ||| ||| ||| |  ||| ||||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||| ||||    
T  41714894 tcaggatcgagatcctacgtatgattggttgttcggcgaaagaacgtaaacacaaggaacataacacgatttgtaagtaggattggtaggttgttaatag 41714993  T
Q  258 agttgagagaaatagagatagaaaatagacggaaaaca 295  Q
     ||||| || |||||| | |||||||||  ||||||||    
T  41714994 tgttgaaagtaatagatagagaaaatagtgggaaaaca 41715031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 150 - 308
Target Start/End: Original strand, 42975600 - 42975758
Alignment:
Q  150 gaatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggtt 249  Q
    ||||||||||||| | ||| |  || ||||||| ||| ||| ||| |||||  |||||||| |||  ||||||||| ||  |||||||||||||||||||    
T  42975600 gaatgtagtcaggttagagtttttaagtaggattggtaggctggtaaaagattgtaaacacgagggtcgtaacacgatttataagtaggatcggtaggtt 42975699  T
Q  250 gttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
    |||||||||||||||||||| | | | |||||||||| | ||||| |||||||||||||    
T  42975700 gttgatagagttgagagaaaaaaacagagaaaatagaggaaaaacggaggaaccaagca 42975758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 33391759 - 33391842
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaag 234  Q
    ||||||||||||||| ||||||||  |||||| |||||||||||||  |||||||||||| ||||||||||||||||| |||||    
T  33391759 aatgtagtcaggatcaagatcctacataggattggtcggccggtgatggaacgtaaacacgaggaacgtaacacggtttgtaag 33391842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 26377669 - 26377615
Alignment:
Q  152 atgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaa 206  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||    
T  26377669 atgtagtcaggatcgagatcgtacataggatcggtcggccggtgaaggaacgtaa 26377615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 40712572 - 40712681
Alignment:
Q  196 aaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagagttgagagaaatagagatagaaaatagacggaaaaca 295  Q
    ||||| ||||||||| |||  | || |||||| |||||||||||| |||||||| |||||||||||||||||||   | |  ||||||||| | ||||||    
T  40712572 aaagatcgtaaacacgagggtcatagcacggtccgtaagtaggattggtaggtttttgatagagttgagagaaa---aaacggaaaatagaggaaaaaca 40712668  T
Q  296 gaggaaccaagca 308  Q
    |||||| ||||||    
T  40712669 gaggaaacaagca 40712681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 266
Target Start/End: Complemental strand, 26377625 - 26377567
Alignment:
Q  211 aaggaacgtaacacggttcgtaagtaggatcggtagg---ttgttgatagagttgagag 266  Q
    |||||||||||||||||||||||||||||| ||||||   || ||||||||||||||||    
T  26377625 aaggaacgtaacacggttcgtaagtaggataggtaggttattattgatagagttgagag 26377567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 258
Target Start/End: Original strand, 950490 - 950597
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||||| || || |  || ||||||||||| ||| ||| || || || |||||| |||  ||||||||  |||||||||||||| |||||||||    
T  950490 aatgtagtcaggttcaagtttttaagtaggatcggtaggctggtaaatgatcgcaaacacgagggtcgtaacacaattcgtaagtaggattggtaggttg 950589  T
Q  251 ttgataga 258  Q
    ||||||||    
T  950590 ttgataga 950597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 21005775 - 21005858
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaag 234  Q
    ||||||||||||| |||| | ||| ||||| ||| |||||||||||| | |||||||  |  ||||||||||||||||||||||    
T  21005775 aatgtagtcaggaacgagtttctacgtaggttcgatcggccggtgaagggacgtaaagtcggggaacgtaacacggttcgtaag 21005858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 39573913 - 39573996
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaag 234  Q
    ||||||||||||| |||| | ||| ||||| ||| |||||||||||| | |||||||  |  ||||||||||||||||||||||    
T  39573913 aatgtagtcaggaacgagtttctacgtaggttcgatcggccggtgaagggacgtaaagtcggggaacgtaacacggttcgtaag 39573996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 6537245 - 6537162
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaag 234  Q
    ||||||||||||| |||| || || ||||| ||| ||||| |||||| | |||||||  |  ||||||||||||||||||||||    
T  6537245 aatgtagtcaggaacgagttcttacgtaggttcgatcggctggtgaagggacgtaaagtcggggaacgtaacacggttcgtaag 6537162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 107; Significance: 2e-53; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 7992132 - 7992290
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||| || |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  7992132 aatgtagtcatgaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttg 7992231  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |||||||| |||||||||||| | |  ||||||||| ||||||||| ||||||||||||    
T  7992232 ttgatagaattgagagaaatatatagggaaaatagagggaaaacaggggaaccaagcat 7992290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 152 - 274
Target Start/End: Complemental strand, 28277068 - 28276946
Alignment:
Q  152 atgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgt 251  Q
    ||||||||||||| ||||||||| ||||||||| | |||||||||||||||||||| || ||||||||||||| ||||||||||||||||  ||||||||    
T  28277068 atgtagtcaggattgagatcctacgtaggatcgattggccggtgaaagaacgtaaatacgaggaacgtaacacagttcgtaagtaggatcaataggttgt 28276969  T
Q  252 tgatagagttgagagaaatagag 274  Q
    ||||||| | |||||||||||||    
T  28276968 tgatagaatagagagaaatagag 28276946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 176 - 308
Target Start/End: Complemental strand, 41106862 - 41106730
Alignment:
Q  176 gtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagagttgagagaaatagaga 275  Q
    |||||||| || ||| |||||||||  ||||||||||||  | ||||||| ||||||||||||||| ||||||||||||||||||||||| ||| | |      
T  41106862 gtaggatcagtaggctggtgaaagattgtaaacacaagggccataacacgattcgtaagtaggatccgtaggttgttgatagagttgagaaaaaaaaact 41106763  T
Q  276 tagaaaatagacggaaaacagaggaaccaagca 308  Q
     |||||||||| |||||||||||||||| ||||    
T  41106762 gagaaaatagagggaaaacagaggaaccgagca 41106730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 162 - 305
Target Start/End: Original strand, 10916858 - 10917001
Alignment:
Q  162 gatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagagtt 261  Q
    ||||||||||||| |||| ||   ||||||||||||||||| ||||||| |||||||||||||| ||  |||||||  ||| ||| || |||||||||||    
T  10916858 gatcgagatcctacgtagaattaatcggccggtgaaagaacataaacacgaggaacgtaacacgttttataagtagagtcgatagattattgatagagtt 10916957  T
Q  262 gagagaaatagagatagaaaatagacggaaaacagaggaaccaa 305  Q
    |||||||||| | | |||||||||| | |||||| |||||||||    
T  10916958 gagagaaatatatagagaaaatagaggaaaaacataggaaccaa 10917001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 192 - 309
Target Start/End: Complemental strand, 5240765 - 5240648
Alignment:
Q  192 ggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagagttgagagaaatagagatagaaaatagacggaa 291  Q
    ||||||||||  ||||||| ||| | |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |   |||||||| | ||    
T  5240765 ggtgaaagaatttaaacacgagggatgtaacatggttcataagtaggatcagtaggttgttgatagagttgagagaaatagatagtaaaaatagaggaaa 5240666  T
Q  292 aacagaggaaccaagcat 309  Q
    |||| |||||||||||||    
T  5240665 aacataggaaccaagcat 5240648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 151 - 305
Target Start/End: Original strand, 41377584 - 41377729
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||||||| |||||| |||||| ||||| || |||||||        |||| |||||||||||||| || ||||||||||| |||||||||    
T  41377584 aatgtagtcaggatcgatatcctaagtaggaccggtcagctggtgaaa--------acacgaggaacgtaacacgatttgtaagtaggattggtaggttg 41377675  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaa 305  Q
    ||||||||||||||||||| | | | |||||||||| | | ||||||||||||||    
T  41377676 ttgatagagttgagagaaa-aaacagagaaaatagaggaataacagaggaaccaa 41377729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 43280947 - 43281021
Alignment:
Q  232 aagtaggatcggtaggttgttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaag 306  Q
    ||||| |||||||||||||||||||||||||| ||||| | | | ||||||| || | |||||||||||||||||    
T  43280947 aagtatgatcggtaggttgttgatagagttgaaagaaaaaaacagagaaaattgaggaaaaacagaggaaccaag 43281021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 28828309 - 28828226
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaag 234  Q
    ||||||||||||| |||| | ||| ||||| ||| |||||||||||| | |||||||  |  ||||||||||||||||||||||    
T  28828309 aatgtagtcaggaacgagtttctacgtaggttcgatcggccggtgaagggacgtaaagtcggggaacgtaacacggttcgtaag 28828226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 151 - 308
Target Start/End: Complemental strand, 7227437 - 7227282
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||| ||| |||||||||||| ||||||||||||||||    
T  7227437 aatgtagtcaggatcgagatcctatgtaggatcagtcgtccggtgaaagaacgtaaacacgaggaatgtaccacggttcgtaattaggatcggtaggttg 7227338  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
    ||||||||||||||||||||||| | |||||||||| | |||||  ||||||||||||    
T  7227337 ttgatagagttgagagaaatagatagagaaaatagaggaaaaac--aggaaccaagca 7227282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 151 - 309
Target Start/End: Complemental strand, 9454981 - 9454823
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||| ||||  |||||||||||||||||||||||||||||||||    
T  9454981 aatgtagtcaggatcgtgatcctacgtaggatcggtcggccggtgaaaaaacgtaaccacgaggagtgtaacacggttcgtaagtaggatcggtaggttg 9454882  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |||||||| |||||||||||| | |  |||||| || ||||||||||||||||||||||    
T  9454881 ttgatagaattgagagaaatatatagggaaaattgagggaaaacagaggaaccaagcat 9454823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 152 - 309
Target Start/End: Complemental strand, 32130520 - 32130363
Alignment:
Q  152 atgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgt 251  Q
    |||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  32130520 atgtagtcaggaacgagttcctacgtaggatcggtcggccgatgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttgt 32130421  T
Q  252 tgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
     |||||| |||||||||||| | |  ||||||||| |||||||| |||||||||||||    
T  32130420 cgatagaattgagagaaatatatagggaaaatagagggaaaacaaaggaaccaagcat 32130363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 53208430 - 53208588
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  53208430 aatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcataagtaggatcgataggttg 53208529  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    | |||||| |||||||||||| | |  ||||||||| ||||||||| ||| ||||||||    
T  53208530 tcgatagaattgagagaaatatatagggaaaatagagggaaaacaggggagccaagcat 53208588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 146 - 294
Target Start/End: Complemental strand, 7323206 - 7323058
Alignment:
Q  146 tcacgaatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggta 245  Q
    |||| ||||||||||||| | || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  7323206 tcaccaatgtagtcaggaacaagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgata 7323107  T
Q  246 ggttgttgatagagttgagagaaatagagatagaaaatagacggaaaac 294  Q
    |||||| |||||| |||||||||||| | |  ||||||||| |||||||    
T  7323106 ggttgtcgatagaattgagagaaatatatagggaaaatagagggaaaac 7323058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 151 - 308
Target Start/End: Complemental strand, 50064229 - 50064072
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||| ||| ||||| || |||||||  || ||||||||||||||||||||||||||     
T  50064229 aatgtagtcaggatcgagatcctacgtaggatcagtcggccgctgaaggaatgtaaaaacgaggaacgagacgcggttcgtaagtaggatcggtaggtta 50064130  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
    ||||||||||||||||| ||| | | |||| ||||| | |||||||||||||||||||    
T  50064129 ttgatagagttgagagatataaacagagaatatagaggaaaaacagaggaaccaagca 50064072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 6e-51; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 12858970 - 12859128
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| ||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  12858970 aatgtagtcaggaacgagttcctacgtagcatcggtcggccggtgaaagaacgtaaacatgaggaacgtaacacggttcgtaagtaggatcgataggttg 12859069  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |||||||| |||||||||||| | |  ||||||||| ||||||||| ||||||||||||    
T  12859070 ttgatagaattgagagaaatatatagggaaaatagagggaaaacaggggaaccaagcat 12859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 151 - 305
Target Start/End: Complemental strand, 32775529 - 32775375
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  32775529 aatgtagtcaggaacgagttcctgcgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttg 32775430  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaa 305  Q
    | |||||| |||||||||||| | |  ||||||||| ||||||||| ||| ||||    
T  32775429 tcgatagaattgagagaaatatatagggaaaatagagggaaaacaggggagccaa 32775375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 151 - 305
Target Start/End: Complemental strand, 19886930 - 19886776
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| |||   ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19886930 aatgtagtcaggaacgagttccagcgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttg 19886831  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaa 305  Q
    | |||||| |||||||||||| | |  ||||||||| ||||||||| ||| ||||    
T  19886830 tcgatagaattgagagaaatatatagggaaaatagagggaaaacaggggagccaa 19886776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 36167473 - 36167631
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| ||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| | |||||||    
T  36167473 aatgtagtcaggaacgagttcctacgtaggatcggttggccggtgaaagaatgtaaacacgaggaacgtaacacggttcgtaagtaggattgataggttg 36167572  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    | |||||| |||||||||||| | |  ||||||||| | ||||||| ||| ||||||||    
T  36167573 tcgatagaattgagagaaatatatagggaaaatagaggaaaaacaggggagccaagcat 36167631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 151 - 271
Target Start/End: Original strand, 46082204 - 46082329
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcgg-----tcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggta 245  Q
    ||||||||||||||| |||||||| ||||||||||     || ||||||||| ||||||||||||||||||||||||||||||| || ||||||| | ||    
T  46082204 aatgtagtcaggatcaagatcctaagtaggatcggatcggtcagccggtgaaggaacgtaaacacaaggaacgtaacacggttcatatgtaggattgcta 46082303  T
Q  246 ggttgttgatagagttgagagaaata 271  Q
    ||||||||||||||||||||||||||    
T  46082304 ggttgttgatagagttgagagaaata 46082329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 152 - 309
Target Start/End: Original strand, 5465442 - 5465591
Alignment:
Q  152 atgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgt 251  Q
    ||||||| |||||||||||||||   ||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||      |||||||||||||    
T  5465442 atgtagttaggatcgagatccta---aggatcgttcgactggtgaaagaacgtaaacacaaggaacgtaacatggttcgta-----tatcggtaggttgt 5465533  T
Q  252 tgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |||||||||||||||||||||| |  ||||||||| ||||| || | || ||||||||    
T  5465534 tgatagagttgagagaaatagatagtgaaaatagagggaaagcaaaagagccaagcat 5465591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 151 - 308
Target Start/End: Original strand, 19780832 - 19780993
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||||||||| ||||| |  || ||| |||| || ||| ||||||||| ||||||||| |||  | ||||||| |||||||||||||| ||||| |||    
T  19780832 aatgtagtcaggttcgagtttttaagtatgatcagtaggctggtgaaagatcgtaaacacgagggtcttaacacgattcgtaagtaggataggtagcttg 19780931  T
Q  251 ttgatagagttgaga----gaaatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
    |||||||||||||||    |||| | |   |||||||||| |||||||||||||||||||||    
T  19780932 ttgatagagttgagagaaggaaaaaaaaggagaaaatagagggaaaacagaggaaccaagca 19780993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 151 - 210
Target Start/End: Original strand, 11599455 - 11599514
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacac 210  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||    
T  11599455 aatgtagtcaggatcgagatcctacgtaggttcggtcggccgatgaaggaacgtaaacac 11599514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 46082338 - 46082412
Alignment:
Q  234 gtaggatcggtaggttgttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
    ||||||| | ||| |||||||||||||||||| ||||| | | |||||||||| | |||||||||||| ||||||    
T  46082338 gtaggattgctagtttgttgatagagttgagataaataaacagagaaaatagaggaaaaacagaggaaacaagca 46082412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 6e-51; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 151 - 309
Target Start/End: Original strand, 13425443 - 13425601
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  13425443 aatgtagtcaggaacgagttcctacgtaggatcggtcggccggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggatcgataggttg 13425542  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagcat 309  Q
    |||||||| |||||||||||| | |  ||||||||| ||||||||| | || |||||||    
T  13425543 ttgatagaattgagagaaatatatagggaaaatagagggaaaacagggaaaacaagcat 13425601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 160 - 305
Target Start/End: Original strand, 18133656 - 18133801
Alignment:
Q  160 aggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagag 259  Q
    ||||||||| ||||| | |||| ||||||||||||||| ||||| |||||| |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  18133656 aggatcgaggtcctacggaggaccggtcggccggtgaatgaacgaaaacacgaggaacgtaacacggttcataagtaggatcggtaggtttttgatagag 18133755  T
Q  260 ttgagagaaatagagatagaaaatagacggaaaacagaggaaccaa 305  Q
    |||| ||||||| | | |||||||||| | ||||||||||||||||    
T  18133756 ttgacagaaataaatagagaaaatagaggaaaaacagaggaaccaa 18133801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 23889796 - 23889931
Alignment:
Q  160 aggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagag 259  Q
    ||||||||| ||||| | |||| ||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||||||    
T  23889796 aggatcgaggtcctacggaggaccggtcggccggtgaaagaacgaaaacacgaggaacgtaacacggttcgttagtaggatcggtaggtttttgatagag 23889895  T
Q  260 ttgagagaaatagagatagaaaatagacggaaaaca 295  Q
    |||| ||||||| | | |||||||||| | ||||||    
T  23889896 ttgacagaaataaatagagaaaatagaggaaaaaca 23889931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 151 - 308
Target Start/End: Original strand, 25100780 - 25100938
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgt-aacacggttcgtaagtaggatcggtaggtt 249  Q
    |||||||| |||||| ||||||||  |||||| |||||||||||||| |||| |||| || |||||||| ||||| ||||||||||||||||||||||||    
T  25100780 aatgtagttaggatcaagatcctacataggattggtcggccggtgaaggaacataaaaacgaggaacgttaacacagttcgtaagtaggatcggtaggtt 25100879  T
Q  250 gttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
    ||||||||  |||||| | ||| | | |||| ||||| | |||| ||||||||||||||    
T  25100880 gttgatagtattgagaaatataaacagagaatatagaggaaaaatagaggaaccaagca 25100938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 269
Target Start/End: Original strand, 6539314 - 6539407
Alignment:
Q  176 gtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagagttgagagaaa 269  Q
    ||||||||||| ||| |||||| |||||||||||  |||||| | ||| ||||||||||||||||||||| ||||||||||| || ||||||||    
T  6539314 gtaggatcggtaggctggtgaaggaacgtaaacattaggaacattacatggttcgtaagtaggatcggtaagttgttgatagggtcgagagaaa 6539407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 10875695 - 10875612
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaag 234  Q
    ||||| ||| |||||||||||||| ||||| ||||||||||| || | |||||||||||| ||| || ||||||||||||||||    
T  10875695 aatgtggtcgggatcgagatcctacgtaggttcggtcggccgatgtaggaacgtaaacacgagggacataacacggttcgtaag 10875612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 151 - 308
Target Start/End: Complemental strand, 8705 - 8547
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaa-cacaaggaacgtaacacggttcgtaagtaggatcggtaggtt 249  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| ||| |||||||| |||||||| |||| |||||||| ||||||    
T  8705 aatgtagtcaggatggagatcctacgtaggatcggtcggccggtgaacgaacgtaaaacacgaggaacgtgacacggtttgtaaataggatcgttaggtt 8606  T
Q  250 gttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaagca 308  Q
     |||||||||||||| |||||| | | |||||||||| | |||||||||||||||||||    
T  8605 tttgatagagttgagtgaaataaatagagaaaatagaggaaaaacagaggaaccaagca 8547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 151 - 305
Target Start/End: Complemental strand, 17449 - 17295
Alignment:
Q  151 aatgtagtcaggatcgagatcctatgtaggatcggtcggccggtgaaagaacgtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttg 250  Q
    |||||| ||||||||||||||||| |||||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||||||| || ||  |||    
T  17449 aatgtaatcaggatcgagatcctacgtaggatctgccggcaggtgaaagaacgtaaacacgaggaacgtaacacggttcgtaagtaggagcgatactttg 17350  T
Q  251 ttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaaccaa 305  Q
    ||||||||||||||||||||||| | ||||||||||  ||| ||| |||||||||    
T  17349 ttgatagagttgagagaaatagacagagaaaatagaaagaatacataggaaccaa 17295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 4495 - 4392
Alignment:
Q  203 gtaaacacaaggaacgtaacacggttcgtaagtaggatcggtaggttgttgatagagttgagagaaatagagatagaaaatagacggaaaacagaggaac 302  Q
    |||||||| |||  |||||||| ||||||||||||||||| |||| ||||||||||||||||||||| | | | |||||||||| | ||||||||||||     
T  4495 gtaaacacgagggtcgtaacacagttcgtaagtaggatcgatagg-tgttgatagagttgagagaaa-aaacagagaaaatagaggaaaaacagaggaaa 4398  T
Q  303 caagca 308  Q
    ||||||    
T  4397 caagca 4392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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