View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF0118_low_7 (Length: 216)
Name: NF0118_low_7
Description: NF0118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0118_low_7 |
 | |
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Alignment Details
Target: chr5 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 19756032 - 19755831
Alignment:
| Q |
1 |
tgtaagtacatttgtaaatacactgtgagacaattaaccacatgattttttcgacaggatcgaaagaggaaaggaacttctacttctgagtcttcttcga |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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|
| T |
19756032 |
tgtaagtacatttgtaaatacactttgagactattaaccacatgattttttcgacaggatcgaaagaggaaaggaacttctacttctgagccttcttcga |
19755933 |
T |
|
| Q |
101 |
aaaagacgaaacagagtggagaagaagtaaattctttacacctttgtgtgcattggtattttcttttcaaaatttactaacaccaaatttttcttctagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |
|
|
| T |
19755932 |
aaaagacgaaacagagtggagaagaagtaagttctttacacatttgtgtgcattggtattttctttccaaaatttactaacaccaattttttcttctagt |
19755833 |
T |
|
| Q |
201 |
cc |
202 |
Q |
| |
|
|| |
|
|
| T |
19755832 |
cc |
19755831 |
T |
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